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Conserved domains on  [gi|1741509480|ref|XP_022430119|]
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MAP3K7 C-terminal-like protein [Delphinapterus leucas]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ClpA super family cl33938
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ...
 148-218 2.03e-03

ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];


The actual alignment was detected with superfamily member COG0542:

Pssm-ID: 440308 [Multi-domain]  Cd Length: 836  Bit Score: 38.91  E-value: 2.03e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1741509480 148 EEYREVKKEIALLEERKKELIAKLDQAEKEKLDA-----AQLAREFEALTEENRTLKLAQSQCIEQLEKLRIQYQK 218
Cdd:COG0542   411 EELDELERRLEQLEIEKEALKKEQDEASFERLAElrdelAELEEELEALKARWEAEKELIEEIQELKEELEQRYGK 486
 
Name Accession Description Interval E-value
ClpA COG0542
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ...
 148-218 2.03e-03

ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440308 [Multi-domain]  Cd Length: 836  Bit Score: 38.91  E-value: 2.03e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1741509480 148 EEYREVKKEIALLEERKKELIAKLDQAEKEKLDA-----AQLAREFEALTEENRTLKLAQSQCIEQLEKLRIQYQK 218
Cdd:COG0542   411 EELDELERRLEQLEIEKEALKKEQDEASFERLAElrdelAELEEELEALKARWEAEKELIEEIQELKEELEQRYGK 486
 
Name Accession Description Interval E-value
ClpA COG0542
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ...
 148-218 2.03e-03

ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440308 [Multi-domain]  Cd Length: 836  Bit Score: 38.91  E-value: 2.03e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1741509480 148 EEYREVKKEIALLEERKKELIAKLDQAEKEKLDA-----AQLAREFEALTEENRTLKLAQSQCIEQLEKLRIQYQK 218
Cdd:COG0542   411 EELDELERRLEQLEIEKEALKKEQDEASFERLAElrdelAELEEELEALKARWEAEKELIEEIQELKEELEQRYGK 486
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 119-220 6.82e-03

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 37.22  E-value: 6.82e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741509480 119 ELDQQLQPLppchdsmesmqvfKQHCQIAEEYREVKKEialLEERKKELIA-KLDQAEKEkldAAQLAREFEALTEENRT 197
Cdd:COG1196   197 ELERQLEPL-------------ERQAEKAERYRELKEE---LKELEAELLLlKLRELEAE---LEELEAELEELEAELEE 257

                          90       100
                  ....*....|....*....|...
gi 1741509480 198 LKLAQSQCIEQLEKLRIQYQKRQ 220
Cdd:COG1196   258 LEAELAELEAELEELRLELEELE 280
DR0291 COG1579
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ...
 145-220 9.38e-03

Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];


Pssm-ID: 441187 [Multi-domain]  Cd Length: 236  Bit Score: 36.06  E-value: 9.38e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1741509480 145 QIAEEYREVKKEIALLEERKKELIAKLDQAEkEKLDAAQLAREFEALTEENRTLKLAQSQC-------IEQLEKLRIQYQ 217
Cdd:COG1579    49 AAKTELEDLEKEIKRLELEIEEVEARIKKYE-EQLGNVRNNKEYEALQKEIESLKRRISDLedeilelMERIEELEEELA 127


                  ...
gi 1741509480 218 KRQ 220
Cdd:COG1579   128 ELE 130
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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