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Conserved domains on  [gi|1204934506|ref|XP_021300578|]
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uncharacterized protein LOC110428986 [Herrania umbratica]

Protein Classification

O-methyltransferase( domain architecture ID 11467877)

O-methyltransferase of the class I-like SAM-binding methyltransferase superfamily, such as catechol O-methyltransferases that can use various catechol-like compounds

CATH:  2.20.25.110
EC:  2.1.1.-|2.1.-.-
Gene Ontology:  GO:0008757|GO:0032259|GO:1904047|GO:0008168|GO:0008171
PubMed:  12504684|12826405
SCOP:  3000118

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TrmR COG4122
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; ...
 45-221 5.30e-75

tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; tRNA 5-hydroxyU34 O-methylase TrmR/YrrM is part of the Pathway/BioSystem: tRNA modification


:

Pssm-ID: 443298  Cd Length: 173  Bit Score: 223.91  E-value: 5.30e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  45 MPAEAALLAWLVRLRGARRVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARPYWERAGVADRIETVIGDASAS 124
Cdd:COG4122     1 MPEQGRLLYLLARLLGAKRILEIGTGTGYSTLWLARALPDDGRLTTIEIDPERAAIARENFARAGLADRIRLILGDALEV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506 125 LDAMLAEdpsrSFDLIFVDADKANYPAYFERVVDLVVPDGLLVFDNTLLDGRVVDPGADDADTRGIRTVNELLRDDDRVD 204
Cdd:COG4122    81 LPRLADG----PFDLVFIDADKSNYPDYLELALPLLRPGGLIVADNVLWHGRVADPARRDPSTRAIREFNEYLREDPRLE 156

                         170
                  ....*....|....*..
gi 1204934506 205 VCVLPLADGVTLARRQP 221
Cdd:COG4122   157 SVLLPIGDGLLLARKRG 173
 
Name Accession Description Interval E-value
TrmR COG4122
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; ...
 45-221 5.30e-75

tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; tRNA 5-hydroxyU34 O-methylase TrmR/YrrM is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 443298  Cd Length: 173  Bit Score: 223.91  E-value: 5.30e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  45 MPAEAALLAWLVRLRGARRVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARPYWERAGVADRIETVIGDASAS 124
Cdd:COG4122     1 MPEQGRLLYLLARLLGAKRILEIGTGTGYSTLWLARALPDDGRLTTIEIDPERAAIARENFARAGLADRIRLILGDALEV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506 125 LDAMLAEdpsrSFDLIFVDADKANYPAYFERVVDLVVPDGLLVFDNTLLDGRVVDPGADDADTRGIRTVNELLRDDDRVD 204
Cdd:COG4122    81 LPRLADG----PFDLVFIDADKSNYPDYLELALPLLRPGGLIVADNVLWHGRVADPARRDPSTRAIREFNEYLREDPRLE 156

                         170
                  ....*....|....*..
gi 1204934506 205 VCVLPLADGVTLARRQP 221
Cdd:COG4122   157 SVLLPIGDGLLLARKRG 173
Methyltransf_3 pfam01596
O-methyltransferase; Members of this family are O-methyltransferases. The family includes ...
 25-219 1.49e-66

O-methyltransferase; Members of this family are O-methyltransferases. The family includes catechol o-methyltransferase, caffeoyl-CoA O-methyltransferase and a family of bacterial O-methyltransferases that may be involved in antibiotic production.


Pssm-ID: 396257 [Multi-domain]  Cd Length: 203  Bit Score: 203.88  E-value: 1.49e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  25 VLAGLRADSAGLPGgTVMPVMPAEAALLAWLVRLRGARRVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARPY 104
Cdd:pfam01596   9 YLKELREETAKLPL-APMQVSPDEGQFLGMLVKLTGAKNVLEIGVFTGYSALAMALALPEDGKITAIDIDPEAYEIAKKF 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506 105 WERAGVADRIETVIGDASASLDAMLAEDPSRSFDLIFVDADKANYPAYFERVVDLVVPDGLLVFDNTLLDGRVVDPGADD 184
Cdd:pfam01596  88 IQKAGVAHKISFILGPALKVLEQLTQDKPLPEFDFIFIDADKSNYPNYYERLLELLKVGGLMAIDNTLWHGKVTEPDDQE 167

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1204934506 185 ADTRGIRTVNELLRDDDRVDVCVLPLADGVTLARR 219
Cdd:pfam01596 168 AKTQRLQEFNKDLAQDPRVEISVIPVGDGITLCRK 202
PLN02476 PLN02476
O-methyltransferase
 25-220 1.13e-52

O-methyltransferase


Pssm-ID: 178094  Cd Length: 278  Bit Score: 171.01  E-value: 1.13e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  25 VLAGLRADSAGLPGgTVMPVMPAEAALLAWLVRLRGARRVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARPY 104
Cdd:PLN02476   84 ILRQLREETSKMRG-SQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRY 162

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506 105 WERAGVADRIETVIGDASASLDAMLAEDPSRSFDLIFVDADKANYPAYFERVVDLVVPDGLLVFDNTLLDGRVVDPGADD 184
Cdd:PLN02476  163 YELAGVSHKVNVKHGLAAESLKSMIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDNVLWHGRVADPLVND 242

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1204934506 185 ADTRGIRTVNELLRDDDRVDVCVLPLADGVTLARRQ 220
Cdd:PLN02476  243 AKTISIRNFNKKLMDDKRVSISMVPIGDGMTICRKR 278
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
 63-168 9.62e-10

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 54.36  E-value: 9.62e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  63 RVLEIGTYTGYGALAMASAlpPGGRLVTCDVNPKWVAFARpYWERAGVADRIETVIGDASAsldamLAEDPSRSFDLIFV 142
Cdd:cd02440     1 RVLDLGCGTGALALALASG--PGARVTGVDISPVALELAR-KAAAALLADNVEVLKGDAEE-----LPPEADESFDVIIS 72

                          90       100       110
                  ....*....|....*....|....*....|
gi 1204934506 143 D----ADKANYPAYFERVVDLVVPDGLLVF 168
Cdd:cd02440    73 DpplhHLVEDLARFLEEARRLLKPGGVLVL 102
 
Name Accession Description Interval E-value
TrmR COG4122
tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; ...
 45-221 5.30e-75

tRNA 5-hydroxyU34 O-methylase TrmR/YrrM [Translation, ribosomal structure and biogenesis]; tRNA 5-hydroxyU34 O-methylase TrmR/YrrM is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 443298  Cd Length: 173  Bit Score: 223.91  E-value: 5.30e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  45 MPAEAALLAWLVRLRGARRVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARPYWERAGVADRIETVIGDASAS 124
Cdd:COG4122     1 MPEQGRLLYLLARLLGAKRILEIGTGTGYSTLWLARALPDDGRLTTIEIDPERAAIARENFARAGLADRIRLILGDALEV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506 125 LDAMLAEdpsrSFDLIFVDADKANYPAYFERVVDLVVPDGLLVFDNTLLDGRVVDPGADDADTRGIRTVNELLRDDDRVD 204
Cdd:COG4122    81 LPRLADG----PFDLVFIDADKSNYPDYLELALPLLRPGGLIVADNVLWHGRVADPARRDPSTRAIREFNEYLREDPRLE 156

                         170
                  ....*....|....*..
gi 1204934506 205 VCVLPLADGVTLARRQP 221
Cdd:COG4122   157 SVLLPIGDGLLLARKRG 173
Methyltransf_3 pfam01596
O-methyltransferase; Members of this family are O-methyltransferases. The family includes ...
 25-219 1.49e-66

O-methyltransferase; Members of this family are O-methyltransferases. The family includes catechol o-methyltransferase, caffeoyl-CoA O-methyltransferase and a family of bacterial O-methyltransferases that may be involved in antibiotic production.


Pssm-ID: 396257 [Multi-domain]  Cd Length: 203  Bit Score: 203.88  E-value: 1.49e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  25 VLAGLRADSAGLPGgTVMPVMPAEAALLAWLVRLRGARRVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARPY 104
Cdd:pfam01596   9 YLKELREETAKLPL-APMQVSPDEGQFLGMLVKLTGAKNVLEIGVFTGYSALAMALALPEDGKITAIDIDPEAYEIAKKF 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506 105 WERAGVADRIETVIGDASASLDAMLAEDPSRSFDLIFVDADKANYPAYFERVVDLVVPDGLLVFDNTLLDGRVVDPGADD 184
Cdd:pfam01596  88 IQKAGVAHKISFILGPALKVLEQLTQDKPLPEFDFIFIDADKSNYPNYYERLLELLKVGGLMAIDNTLWHGKVTEPDDQE 167

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1204934506 185 ADTRGIRTVNELLRDDDRVDVCVLPLADGVTLARR 219
Cdd:pfam01596 168 AKTQRLQEFNKDLAQDPRVEISVIPVGDGITLCRK 202
PLN02476 PLN02476
O-methyltransferase
 25-220 1.13e-52

O-methyltransferase


Pssm-ID: 178094  Cd Length: 278  Bit Score: 171.01  E-value: 1.13e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  25 VLAGLRADSAGLPGgTVMPVMPAEAALLAWLVRLRGARRVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARPY 104
Cdd:PLN02476   84 ILRQLREETSKMRG-SQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRY 162

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506 105 WERAGVADRIETVIGDASASLDAMLAEDPSRSFDLIFVDADKANYPAYFERVVDLVVPDGLLVFDNTLLDGRVVDPGADD 184
Cdd:PLN02476  163 YELAGVSHKVNVKHGLAAESLKSMIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDNVLWHGRVADPLVND 242

                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1204934506 185 ADTRGIRTVNELLRDDDRVDVCVLPLADGVTLARRQ 220
Cdd:PLN02476  243 AKTISIRNFNKKLMDDKRVSISMVPIGDGMTICRKR 278
PLN02589 PLN02589
caffeoyl-CoA O-methyltransferase
 5-219 3.06e-42

caffeoyl-CoA O-methyltransferase


Pssm-ID: 166230  Cd Length: 247  Bit Score: 143.21  E-value: 3.06e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506   5 LAMTDDLLAYV-EGISGPADA-VLAGLRADSAGLPGgTVMPVMPAEAALLAWLVRLRGARRVLEIGTYTGYGALAMASAL 82
Cdd:PLN02589   23 LLQSDALYQYIlETSVYPREPeSMKELRELTAKHPW-NIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALAL 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  83 PPGGRLVTCDVNPKWVAFARPYWERAGVADRIETVIGDASASLDAMLAEDPSR-SFDLIFVDADKANYPAYFERVVDLVV 161
Cdd:PLN02589  102 PEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDQMIEDGKYHgTFDFIFVDADKDNYINYHKRLIDLVK 181

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1204934506 162 PDGLLVFDNTLLDGRVVDPgaDDADTRG--------IRTVNELLRDDDRVDVCVLPLADGVTLARR 219
Cdd:PLN02589  182 VGGVIGYDNTLWNGSVVAP--PDAPMRKyvryyrdfVLELNKALAADPRIEICMLPVGDGITLCRR 245
PLN02781 PLN02781
Probable caffeoyl-CoA O-methyltransferase
 42-219 1.19e-37

Probable caffeoyl-CoA O-methyltransferase


Pssm-ID: 215417  Cd Length: 234  Bit Score: 131.09  E-value: 1.19e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  42 MPVMPAEAALLAWLVRLRGARRVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARPYWERAGVADRIETVIGDA 121
Cdd:PLN02781   50 MEVPVDEGLFLSMLVKIMNAKNTLEIGVFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDA 129

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506 122 SASLDAMLAEDPSRSFDLIFVDADKANYPAYFERVVDLVVPDGLLVFDNTLLDGRVvdpgADDADT-----RGIRTV--- 193
Cdd:PLN02781  130 LSALDQLLNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDNTLWFGFV----AQEEDEvpehmRAYRKAlle 205

                         170       180
                  ....*....|....*....|....*..
gi 1204934506 194 -NELLRDDDRVDVCVLPLADGVTLARR 219
Cdd:PLN02781  206 fNKLLASDPRVEISQISIGDGVTLCRR 232
Methyltransf_24 pfam13578
Methyltransferase domain; This family appears to be a methyltransferase domain.
 65-171 8.24e-15

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 433324 [Multi-domain]  Cd Length: 106  Bit Score: 67.72  E-value: 8.24e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  65 LEIGTYTGYGALAMASALPPGG--RLVTCDVNPKWVAFARpYWERAGVADRIETVIGDAsaslDAMLAEDPSRSFDLIFV 142
Cdd:pfam13578   1 VEIGTYSGVSTLWLAAALRDNGlgRLTAVDPDPGAEEAGA-LLRKAGLDDRVRLIVGDS----REALPSLADGPIDLLFI 75

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1204934506 143 DADkANYPA---YFERVVDLVVPDGLLVFDNT 171
Cdd:pfam13578  76 DGD-HTYEAvlnDLELWLPRLAPGGVILFHDI 106
Cfa COG2230
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ...
 46-168 7.02e-14

Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];


Pssm-ID: 441831 [Multi-domain]  Cd Length: 158  Bit Score: 66.49  E-value: 7.02e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  46 PAEAALLAWLVR---LRGARRVLEIGTytGYGALAMASALPPGGRLVTCDVNPKWVAFARPYWERAGVADRIETVIGDas 122
Cdd:COG2230    34 EAQEAKLDLILRklgLKPGMRVLDIGC--GWGGLALYLARRYGVRVTGVTLSPEQLEYARERAAEAGLADRVEVRLAD-- 109

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1204934506 123 asldaMLAEDPSRSFDLIF-VDA----DKANYPAYFERVVDLVVPDGLLVF 168
Cdd:COG2230   110 -----YRDLPADGQFDAIVsIGMfehvGPENYPAYFAKVARLLKPGGRLLL 155
Gcd14 COG2519
tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 ...
 43-168 1.22e-10

tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 N-methylase Trm61 is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 442009 [Multi-domain]  Cd Length: 249  Bit Score: 59.40  E-value: 1.22e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  43 PVMPAEAALLAWLVRLRGARRVLEIGtyTGYGALAM--ASALPPGGRLVTCDVNPKWVAFARPYWERAGVADRIETVIGD 120
Cdd:COG2519    74 IIYPKDAGYIIARLDIFPGARVLEAG--TGSGALTLalARAVGPEGKVYSYERREDFAEIARKNLERFGLPDNVELKLGD 151

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1204934506 121 ASASLDAmlaedpsRSFDLIFVDADKanyP-AYFERVVDLVVPDGLLVF 168
Cdd:COG2519   152 IREGIDE-------GDVDAVFLDMPD---PwEALEAVAKALKPGGVLVA 190
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
 63-168 9.62e-10

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 54.36  E-value: 9.62e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  63 RVLEIGTYTGYGALAMASAlpPGGRLVTCDVNPKWVAFARpYWERAGVADRIETVIGDASAsldamLAEDPSRSFDLIFV 142
Cdd:cd02440     1 RVLDLGCGTGALALALASG--PGARVTGVDISPVALELAR-KAAAALLADNVEVLKGDAEE-----LPPEADESFDVIIS 72

                          90       100       110
                  ....*....|....*....|....*....|
gi 1204934506 143 D----ADKANYPAYFERVVDLVVPDGLLVF 168
Cdd:cd02440    73 DpplhHLVEDLARFLEEARRLLKPGGVLVL 102
SmtA COG0500
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ...
 46-208 1.70e-09

SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];


Pssm-ID: 440266 [Multi-domain]  Cd Length: 199  Bit Score: 55.31  E-value: 1.70e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  46 PAEAALLAWLVRLRGARRVLEIGtyTGYGALAMASALPPGGRLVTCDVNPKWVAFARpywERAGVA--DRIETVIGDAsa 123
Cdd:COG0500    12 PGLAALLALLERLPKGGRVLDLG--CGTGRNLLALAARFGGRVIGIDLSPEAIALAR---ARAAKAglGNVEFLVADL-- 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506 124 sldAMLAEDPSRSFDLIFV-----DADKANYPAYFERVVDLVVPDGLLVFDNTLLDGRVVDpgADDADTRGIRTVNELLR 198
Cdd:COG0500    85 ---AELDPLPAESFDLVVAfgvlhHLPPEEREALLRELARALKPGGVLLLSASDAAAALSL--ARLLLLATASLLELLLL 159

                         170
                  ....*....|
gi 1204934506 199 DDDRVDVCVL 208
Cdd:COG0500   160 LRLLALELYL 169
TrmN6 COG4123
tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) ...
 48-163 2.95e-08

tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) A37 N6-methylase TrmN6 is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 443299 [Multi-domain]  Cd Length: 238  Bit Score: 52.45  E-value: 2.95e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  48 EAALLAWLVRLRGARRVLEIGTYTGYGALAMAsALPPGGRLVTCDVNPKWVAFARPYWERAGVADRIETVIGDasasLDA 127
Cdd:COG4123    25 DAVLLAAFAPVKKGGRVLDLGTGTGVIALMLA-QRSPGARITGVEIQPEAAELARRNVALNGLEDRITVIHGD----LKE 99

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1204934506 128 MLAEDPSRSFDLIFvdadkANyPAYFERVVDLVVPD 163
Cdd:COG4123   100 FAAELPPGSFDLVV-----SN-PPYFKAGSGRKSPD 129
Methyltransf_25 pfam13649
Methyltransferase domain; This family appears to be a methyltransferase domain.
 64-164 7.51e-07

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 463945 [Multi-domain]  Cd Length: 96  Bit Score: 46.02  E-value: 7.51e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  64 VLEIGTYTGYGALAMASALppGGRLVTCDVNPKWVAFARPYWERAGVadRIETVIGDASAsldamlAEDPSRSFDLIFVD 143
Cdd:pfam13649   1 VLDLGCGTGRLTLALARRG--GARVTGVDLSPEMLERARERAAEAGL--NVEFVQGDAED------LPFPDGSFDLVVSS 70

                          90       100
                  ....*....|....*....|....*.
gi 1204934506 144 A-----DKANYPAYFERVVDLVVPDG 164
Cdd:pfam13649  71 GvlhhlPDPDLEAALREIARVLKPGG 96
SpeE COG0421
Spermidine synthase (polyamine aminopropyltransferase) [Amino acid transport and metabolism];
61-167 1.68e-06

Spermidine synthase (polyamine aminopropyltransferase) [Amino acid transport and metabolism];


Pssm-ID: 440190 [Multi-domain]  Cd Length: 195  Bit Score: 46.75  E-value: 1.68e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  61 ARRVLEIGTytGYGALAMA-SALPPGGRLVTCDVNPKWVAFAR---PYWERAGVADRIETVIGDASASLdamlaEDPSRS 136
Cdd:COG0421    38 PKRVLIIGG--GDGGLARElLKHPPVERVDVVEIDPEVVELAReyfPLLAPAFDDPRLRVVIGDGRAFL-----REAEES 110

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1204934506 137 FDLIFVDADKANYPA-------YFERVVDLVVPDGLLV 167
Cdd:COG0421   111 YDVIIVDLTDPVGPAeglftreFYEDCRRALKPGGVLV 148
Pcm COG2518
Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, ...
 46-144 2.31e-06

Protein-L-isoaspartate O-methyltransferase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 442008 [Multi-domain]  Cd Length: 197  Bit Score: 46.62  E-value: 2.31e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  46 PAEAALLAWLVRLRGARRVLEIGTYTGYGAlAMASALppGGRLVTCDVNPKWVAFARPYWERAGVaDRIETVIGDASASL 125
Cdd:COG2518    52 PYIVARMLEALDLKPGDRVLEIGTGSGYQA-AVLARL--AGRVYSVERDPELAERARERLAALGY-DNVTVRVGDGALGW 127

                          90
                  ....*....|....*....
gi 1204934506 126 DamlAEDPsrsFDLIFVDA 144
Cdd:COG2518   128 P---EHAP---FDRIIVTA 140
UbiG COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ...
 48-168 2.75e-06

2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 441829 [Multi-domain]  Cd Length: 126  Bit Score: 45.01  E-value: 2.75e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  48 EAALLAWLVRLRGA-RRVLEIGTYTGYGALAMASAlppGGRLVTCDVNPKWVAFARpyweRAGVADRIETVIGDASAsld 126
Cdd:COG2227    11 DRRLAALLARLLPAgGRVLDVGCGTGRLALALARR---GADVTGVDISPEALEIAR----ERAAELNVDFVQGDLED--- 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1204934506 127 amlAEDPSRSFDLIF---VDADKANYPAYFERVVDLVVPDGLLVF 168
Cdd:COG2227    81 ---LPLEDGSFDLVIcseVLEHLPDPAALLRELARLLKPGGLLLL 122
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
 47-168 1.25e-05

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 43.44  E-value: 1.25e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  47 AEAALLAWLvRLRGARRVLEIGTYTGYGALAMASAlppGGRLVTCDVNPKWVAFARPYWERAGVadRIETVIGDASAsLD 126
Cdd:COG2226    10 GREALLAAL-GLRPGARVLDLGCGTGRLALALAER---GARVTGVDISPEMLELARERAAEAGL--NVEFVVGDAED-LP 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1204934506 127 AmlaedPSRSFDLIFV--------DADKAnypayFERVVDLVVPDGLLVF 168
Cdd:COG2226    83 F-----PDGSFDLVISsfvlhhlpDPERA-----LAEIARVLKPGGRLVV 122
cbiT PRK00377
cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
 42-174 2.13e-05

cobalt-precorrin-6Y C(15)-methyltransferase; Provisional


Pssm-ID: 234740  Cd Length: 198  Bit Score: 43.63  E-value: 2.13e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  42 MPVMPAEAALLAWL-VRLRGARRVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARPYWERAGVADRIETVIGD 120
Cdd:PRK00377   21 IPMTKEEIRALALSkLRLRKGDMILDIGCGTGSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGE 100

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1204934506 121 ASASLDAMLAEdpsrsFDLIFVDADKANYPAYFERVVDLVVPDGLLVFDNTLLD 174
Cdd:PRK00377  101 APEILFTINEK-----FDRIFIGGGSEKLKEIISASWEIIKKGGRIVIDAILLE 149
COG2263 COG2263
Predicted RNA methylase [General function prediction only];
46-141 3.95e-05

Predicted RNA methylase [General function prediction only];


Pssm-ID: 441864 [Multi-domain]  Cd Length: 199  Bit Score: 42.97  E-value: 3.95e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  46 PAE-AALLAWLVRLRG---ARRVLEIGtyTGYGALAMASALpPGGRLVTC-DVNPKWVAFARPYWERAGVadRIETVIGD 120
Cdd:COG2263    27 PAElAAELLHLAYLRGdieGKTVLDLG--CGTGMLAIGAAL-LGAKKVVGvDIDPEALEIARENAERLGV--RVDFIRAD 101

                          90       100
                  ....*....|....*....|.
gi 1204934506 121 ASASldamlaeDPSRSFDLIF 141
Cdd:COG2263   102 VTRI-------PLGGSVDTVV 115
Tam COG4106
Trans-aconitate methyltransferase [Energy production and conversion];
60-169 4.75e-05

Trans-aconitate methyltransferase [Energy production and conversion];


Pssm-ID: 443282 [Multi-domain]  Cd Length: 100  Bit Score: 40.96  E-value: 4.75e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  60 GARRVLEIGTYTGYGALAMASALpPGGRLVTCDVNPKWVAFARpywERAGvadRIETVIGDasasldaMLAEDPSRSFDL 139
Cdd:COG4106     1 PPRRVLDLGCGTGRLTALLAERF-PGARVTGVDLSPEMLARAR---ARLP---NVRFVVAD-------LRDLDPPEPFDL 66

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1204934506 140 IFvdadkANY--------PAYFERVVDLVVPDGLLVFD 169
Cdd:COG4106    67 VV-----SNAalhwlpdhAALLARLAAALAPGGVLAVQ 99
RlmK COG1092
23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI [Translation, ribosomal structure ...
 62-168 9.16e-05

23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI [Translation, ribosomal structure and biogenesis]; 23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI is part of the Pathway/BioSystem: 23S rRNA modification


Pssm-ID: 440709 [Multi-domain]  Cd Length: 392  Bit Score: 42.48  E-value: 9.16e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  62 RRVLEIGTYTGYGALAMASAlppGGRLVTC-DVNPKWVAFARPYWERAGVADRIETVIGDASASLDAMLAEDpsRSFDLI 140
Cdd:COG1092   218 KRVLNLFSYTGGFSVHAAAG---GAKSVTSvDLSATALEWAKENAALNGLDDRHEFVQADAFDWLRELAREG--ERFDLI 292

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1204934506 141 FVD--------ADKAN----YPAYFERVVDLVVPDGLLVF 168
Cdd:COG1092   293 ILDppafakskKDLFDaqrdYKDLNRLALKLLAPGGILVT 332
COG4076 COG4076
Predicted RNA methylase [General function prediction only];
62-123 1.01e-04

Predicted RNA methylase [General function prediction only];


Pssm-ID: 443253 [Multi-domain]  Cd Length: 230  Bit Score: 41.95  E-value: 1.01e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1204934506  62 RRVLEIGTytGYGALAMASALPPGGRLVTCDVNPKWVAFARPYWERAGVADRIETVIGDASA 123
Cdd:COG4076    37 DVVLDIGT--GSGLLSMLAARAGAKKVYAVEVNPDIAAVARRIIAANGLSDRITVINADATD 96
PRK13943 PRK13943
protein-L-isoaspartate O-methyltransferase; Provisional
 46-150 1.69e-04

protein-L-isoaspartate O-methyltransferase; Provisional


Pssm-ID: 237568 [Multi-domain]  Cd Length: 322  Bit Score: 41.76  E-value: 1.69e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  46 PAEAALLAWLVRLRGARRVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARPYWERAGVADRIeTVIGDASASL 125
Cdd:PRK13943   66 PSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVI-FVCGDGYYGV 144

                          90       100
                  ....*....|....*....|....*
gi 1204934506 126 DAMlaedpsRSFDLIFVDADKANYP 150
Cdd:PRK13943  145 PEF------APYDVIFVTVGVDEVP 163
PRK13942 PRK13942
protein-L-isoaspartate O-methyltransferase; Provisional
 50-164 2.40e-04

protein-L-isoaspartate O-methyltransferase; Provisional


Pssm-ID: 184409  Cd Length: 212  Bit Score: 40.77  E-value: 2.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  50 ALLAWLVRLRGARRVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARPYWERAGVaDRIETVIGDASasldamL 129
Cdd:PRK13942   66 AIMCELLDLKEGMKVLEIGTGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGY-DNVEVIVGDGT------L 138

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1204934506 130 AEDPSRSFDLIFVDADKANYP-AYFERVVD---LVVPDG 164
Cdd:PRK13942  139 GYEENAPYDRIYVTAAGPDIPkPLIEQLKDggiMVIPVG 177
PRK13944 PRK13944
protein-L-isoaspartate O-methyltransferase; Provisional
 46-150 2.93e-04

protein-L-isoaspartate O-methyltransferase; Provisional


Pssm-ID: 140001  Cd Length: 205  Bit Score: 40.57  E-value: 2.93e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  46 PAEAALLAWLVRLRGARRVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARPYWERAGVADRIETVIGDASASL 125
Cdd:PRK13944   58 PHMVAMMCELIEPRPGMKILEVGTGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGL 137

                          90       100
                  ....*....|....*....|....*
gi 1204934506 126 DAmlaedpSRSFDLIFVDADKANYP 150
Cdd:PRK13944  138 EK------HAPFDAIIVTAAASTIP 156
Methyltransf_31 pfam13847
Methyltransferase domain; This family appears to have methyltransferase activity.
 58-167 3.35e-04

Methyltransferase domain; This family appears to have methyltransferase activity.


Pssm-ID: 463998 [Multi-domain]  Cd Length: 150  Bit Score: 39.71  E-value: 3.35e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  58 LRGARRVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARPYWERAGVaDRIETVIGDASAsLDAMLAEDpsrSF 137
Cdd:pfam13847   1 IDKGMRVLDLGCGTGHLSFELAEELGPNAEVVGIDISEEAIEKARENAQKLGF-DNVEFEQGDIEE-LPELLEDD---KF 75

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1204934506 138 DLIF---VDADKANYPAYFERVVDLVVPDGLLV 167
Cdd:pfam13847  76 DVVIsncVLNHIPDPDKVLQEILRVLKPGGRLI 108
PRK08317 PRK08317
hypothetical protein; Provisional
 63-143 6.04e-04

hypothetical protein; Provisional


Pssm-ID: 181382 [Multi-domain]  Cd Length: 241  Bit Score: 39.92  E-value: 6.04e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  63 RVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARpywER-AGVADRIETVIGDAsASLDAmlaedPSRSFDLIF 141
Cdd:PRK08317   22 RVLDVGCGPGNDARELARRVGPEGRVVGIDRSEAMLALAK---ERaAGLGPNVEFVRGDA-DGLPF-----PDGSFDAVR 92


                  ..
gi 1204934506 142 VD 143
Cdd:PRK08317   93 SD 94
PRK14968 PRK14968
putative methyltransferase; Provisional
 46-140 7.13e-04

putative methyltransferase; Provisional


Pssm-ID: 237872 [Multi-domain]  Cd Length: 188  Bit Score: 39.11  E-value: 7.13e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  46 PAE-AALLAWLVRLRGARRVLEIGTYTGYGALAMASAlppGGRLVTCDVNPKWVAFARPYWERAGVADR-IETVIGDASA 123
Cdd:PRK14968    8 PAEdSFLLAENAVDKKGDRVLEVGTGSGIVAIVAAKN---GKKVVGVDINPYAVECAKCNAKLNNIRNNgVEVIRSDLFE 84

                          90
                  ....*....|....*..
gi 1204934506 124 SLDAmlaedpsRSFDLI 140
Cdd:PRK14968   85 PFRG-------DKFDVI 94
PCMT pfam01135
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
49-165 3.77e-03

Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);


Pssm-ID: 395902 [Multi-domain]  Cd Length: 205  Bit Score: 37.35  E-value: 3.77e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  49 AALLAWLvRLRGARRVLEIGTYTGYGALAMASALPPGGRLVTCDVNPKWVAFARPYWERAGvADRIETVIGDASasldam 128
Cdd:pfam01135  63 AMMLELL-ELKPGMRVLEIGSGSGYLTACFARMVGEVGRVVSIEHIPELVEIARRNLEKLG-LENVIVVVGDGR------ 134

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1204934506 129 LAEDPSRSFDLIFVDADKANYP-AYFERVVD---LVVPDGL 165
Cdd:pfam01135 135 QGWPEFAPYDAIHVGAAAPEIPeALIDQLKEggrLVIPVGP 175
COG4976 COG4976
Predicted methyltransferase, contains TPR repeat [General function prediction only];
49-169 3.85e-03

Predicted methyltransferase, contains TPR repeat [General function prediction only];


Pssm-ID: 444001 [Multi-domain]  Cd Length: 181  Bit Score: 36.90  E-value: 3.85e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  49 AALLAWLVRLRGARRVLEIGTYTGYGALAMASAlppGGRLVTCDVNPKWVAFARpyweRAGVADRIETviGDASAsldam 128
Cdd:COG4976    35 AEELLARLPPGPFGRVLDLGCGTGLLGEALRPR---GYRLTGVDLSEEMLAKAR----EKGVYDRLLV--ADLAD----- 100

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1204934506 129 lAEDPSRSFDLIF---VDADKANYPAYFERVVDLVVPDGLLVFD 169
Cdd:COG4976   101 -LAEPDGRFDLIVaadVLTYLGDLAAVFAGVARALKPGGLFIFS 143
PRK04457 PRK04457
polyamine aminopropyltransferase;
50-167 4.33e-03

polyamine aminopropyltransferase;


Pssm-ID: 179854 [Multi-domain]  Cd Length: 262  Bit Score: 37.33  E-value: 4.33e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  50 ALLAWLVRLRGARRVLEIGTytGYGALA-MASALPPGGRLVTCDVNPKWVAFARPYWERAGVADRIETVIGDASasldAM 128
Cdd:PRK04457   56 AMMGFLLFNPRPQHILQIGL--GGGSLAkFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGA----EY 129

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1204934506 129 LAEDPSrSFDLIFVDA-DKANYP------AYFERVVDLVVPDGLLV 167
Cdd:PRK04457  130 IAVHRH-STDVILVDGfDGEGIIdalctqPFFDDCRNALSSDGIFV 174
RsmB COG0144
16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and ...
 75-144 5.56e-03

16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family is part of the Pathway/BioSystem: 16S rRNA modification


Pssm-ID: 439914 [Multi-domain]  Cd Length: 441  Bit Score: 37.29  E-value: 5.56e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1204934506  75 ALAMASALPPGGRLVTCDVNPKWVAFARPYWERAGVaDRIETVIGDASAsldamLAEDPSRSFDLIFVDA 144
Cdd:COG0144   264 TLHLAELMGNKGRVVAVDISEHRLKRLRENLARLGL-SNVEVVVADARE-----LLEWLPGKFDRVLLDA 327
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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