|
Name |
Accession |
Description |
Interval |
E-value |
| SE |
pfam08491 |
Squalene epoxidase; This domain is found in squalene epoxidase (SE) and related proteins which ... |
277-548 |
6.84e-155 |
|
Squalene epoxidase; This domain is found in squalene epoxidase (SE) and related proteins which are found in taxonomically diverse groups of eukaryotes and also in bacteria. SE was first cloned from Saccharomyces cerevisiae where it was named ERG1. It contains a putative FAD binding site and is a key enzyme in the sterol biosynthetic pathway. Putative transmembrane regions are found to the protein's C-terminus.
Pssm-ID: 400679 Cd Length: 276 Bit Score: 444.47 E-value: 6.84e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 277 HAPLTVVADGLFSKFRKSLISNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISSSETRVLVDVRGE-MPR- 354
Cdd:pfam08491 1 FAPLTIVCDGCFSKFRKSLSDNKPEVGSYFVGLILKNADLPAPNHGHVILGKPSPVLLYQISSTETRILCDYPGPkLPSi 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 355 ---NLREYMVEKIYPQIPDHLKEPFLEATENSRLRSMPASFLPPSSVNKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLW 431
Cdd:pfam08491 81 angELKEYLKKSVAPQIPKELRPSFLAALEEGKIRSMPNSFLPASKNRKKGLILLGDALNMRHPLTGGGMTVGLNDIVLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 432 RKLLKGIPDLYDDAAIFEAKKSFYWERKAsHSFVVNILAQALYELFSATDDSLHQLRKACFLYFKLGGECVAGPVGLLSV 511
Cdd:pfam08491 161 RKLLGPLRDLSDREKVSKVLKSFHWKRKP-YDAVINTLSIALYSLFAADSDELKALRKGCFDYFKLGGDCVSGPVALLSG 239
|
250 260 270
....*....|....*....|....*....|....*..
gi 966959948 512 LSPNPLVLIGHFFAVAVYAIYFCFKSEPWITKPRALL 548
Cdd:pfam08491 240 LLPRPLLLFGHFFAVALYSIYQNFIPRPILGSPLALL 276
|
|
| PTZ00367 |
PTZ00367 |
squalene epoxidase; Provisional |
123-572 |
6.33e-129 |
|
squalene epoxidase; Provisional
Pssm-ID: 240384 [Multi-domain] Cd Length: 567 Bit Score: 389.21 E-value: 6.33e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 123 DPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDLK-EPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAqAVNGYMIHDQE 201
Cdd:PTZ00367 33 DYDVIIVGGSIAGPVLAKALSKQGRKVLMLERDLFsKPDRIVGELLQPGGVNALKELGMEECAEGIGM-PCFGYVVFDHK 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 202 SKsEVQIPFplsenNQVQSGRAFHHGRFIMSLRKAAMA--EPNAKFIEGVVLQLLEED----DAVMGVQYKDKETGD--- 272
Cdd:PTZ00367 112 GK-QVKLPY-----GAGASGVSFHFGDFVQNLRSHVFHncQDNVTMLEGTVNSLLEEGpgfsERAYGVEYTEAEKYDvpe 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 273 -----------------IKELHAPLTVVADGLFSKFRKSLISNKVSVS--SHFVGFLMKNAPQFKANHAELILANPSPVL 333
Cdd:PTZ00367 186 npfredppsanpsattvRKVATAPLVVMCDGGMSKFKSRYQHYTPASEnhSHFVGLVLKNVRLPKEQHGTVFLGKTGPIL 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 334 IYQISSSETRVLVDVRGEMPRNLRE---YMVEKIYPQIPDHLKEPFLEATEN-SRLRSMPASFLPPSSVNKRGVLLLGDA 409
Cdd:PTZ00367 266 SYRLDDNELRVLVDYNKPTLPSLEEqseWLIEDVAPHLPENMRESFIRASKDtKRIRSMPNARYPPAFPSIKGYVGIGDH 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 410 YNMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYD---------DAAIFEAKKSFYWERKaSHSFVVNILAQALYELFSAT 480
Cdd:PTZ00367 346 ANQRHPLTGGGMTCCFSDCIRLAKSLTGIKSLRSidqnemaeiEDAIQAAILSYARNRK-THASTINILSWALYSVFSSP 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 481 ddslhQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLVLIGHFFAVAVYAI--------------------YFCFKSEPW 540
Cdd:PTZ00367 425 -----ALRDACLDYFSLGGECVTGPMSLLSGLDPSPGGLLFHYFSVALYGVlnlimetgaysifgkqlssfEKLTNVASF 499
|
490 500 510
....*....|....*....|....*....|..
gi 966959948 541 ITKPRALLSSGAVLYKACSIIFPLIYSEMKYM 572
Cdd:PTZ00367 500 FVDPERIKHALYLLGAATTIAAPLAKSEFVSL 531
|
|
| PLN02985 |
PLN02985 |
squalene monooxygenase |
125-531 |
2.34e-104 |
|
squalene monooxygenase
Pssm-ID: 178566 [Multi-domain] Cd Length: 514 Bit Score: 324.16 E-value: 2.34e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLDAQAVNGYMIHdqESKS 204
Cdd:PLN02985 45 DVIIVGAGVGGSALAYALAKDGRRVHVIERDLREPERMMGEFMQPGGRFMLSKLGLEDCLEGIDAQKATGMAVY--KDGK 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 205 EVQIPFPLSENN--QVQSGRAFHHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDDAVMGVQYKDKETGDIKELhAPLTV 282
Cdd:PLN02985 123 EAVAPFPVDNNNfpYEPSARSFHNGRFVQRLRQKASSLPNVRLEEGTVKSLIEEKGVIKGVTYKNSAGEETTAL-APLTV 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 283 VADGLFSKFRKSLISNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISSSETRVLVDV---------RGEMP 353
Cdd:PLN02985 202 VCDGCYSNLRRSLNDNNAEVLSYQVGYISKNCRLEEPEKLHLIMSKPSFTMLYQISSTDVRCVFEVlpdnipsiaNGEMS 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 354 rnlrEYMVEKIYPQIPDHLKEPFLEAT-ENSRLRSMPASFLPPSSVNKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWR 432
Cdd:PLN02985 282 ----TFVKNTIAPQVPPKLRKIFLKGIdEGAHIKVVPTKRMSATLSDKKGVIVLGDAFNMRHPAIASGMMVLLSDILILR 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 433 KLLKGIPDLYDDAAIFEAKKSFYWERKAShSFVVNILAQALYE-LFSATDDSLHQLRKACFLYFKLGGECVAGPVGLLSV 511
Cdd:PLN02985 358 RLLQPLSNLGNANKVSEVIKSFYDIRKPM-SATVNTLGNAFSQvLVASTDEAKEAMRQGCYDYLCSGGFRTSGMMALLGG 436
|
410 420
....*....|....*....|
gi 966959948 512 LSPNPLVLIGHFFAVAVYAI 531
Cdd:PLN02985 437 MNPRPLSLIYHLCAITLSSI 456
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
121-490 |
7.31e-25 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 105.41 E-value: 7.31e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 121 QNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLdAQAVNGYMIHDQ 200
Cdd:COG0654 1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLWDRLLAR-GAPIRGIRVRDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 201 ESKSEVQiPFPLSEnNQVQSGRAFHHGRFIMSLRKAAmAEPNAKFIEGVVLQLLEEDDAVMGVQYKDKETgdikeLHAPL 280
Cdd:COG0654 80 SDGRVLA-RFDAAE-TGLPAGLVVPRADLERALLEAA-RALGVELRFGTEVTGLEQDADGVTVTLADGRT-----LRADL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 281 TVVADGLFSKFRKSLisnkvsvsshFVGFLMKNAPQfkanhaelilanpspvliyqissseTRVLVDVRGEmprnlreym 360
Cdd:COG0654 152 VVGADGARSAVRRLL----------GIGFTGRDYPQ-------------------------RALWAGVRTE--------- 187
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 361 VEKIYPQIPDHLKEpFLEATENSRLrsmPASFLPPSSVNKRGVLLLGDA-YNMrHPLTGGGMTVAFKDIK-LWRKLLKGI 438
Cdd:COG0654 188 LRARLAAAGPRLGE-LLELSPRSAF---PLRRRRAERWRRGRVVLLGDAaHTM-HPLGGQGANLALRDAAaLAWKLAAAL 262
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 966959948 439 PDLYDDAAI--FEAkksfywERKASHSFVVNiLAQALYELFSATDDSLHQLRKA 490
Cdd:COG0654 263 RGRDDEAALarYER------ERRPRAARVQR-AADALGRLFHPDSPPLRLLRNA 309
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
131-426 |
1.45e-18 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 86.17 E-value: 1.45e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 131 AGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEgldaQAVNGYMIHDQeSKSEVQIPF 210
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLLPRALEELEPLGLDEPLE----RPVRGARFYSP-GGKSVELPP 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 211 PLSENNQVQsgRAfhhgRFIMSLRKAAmAEPNAKFIEGV-VLQLLEEDDAVMgVqykdkETGDIKELHAPLTVVADGLFS 289
Cdd:COG0644 76 GRGGGYVVD--RA----RFDRWLAEQA-EEAGAEVRTGTrVTDVLRDDGRVV-V-----RTGDGEEIRADYVVDADGARS 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 290 KFRKSLISNKVSVSSHFVGFLMKnapqfkanhaelilanpspvliyqissseTRVLVDVRGEMPRNLREYMVEKIYPQ-- 367
Cdd:COG0644 143 LLARKLGLKRRSDEPQDYALAIK-----------------------------EHWELPPLEGVDPGAVEFFFGEGAPGgy 193
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 966959948 368 ---IPdhlkepfleATENSRLRSMPASFLPPSSVnKRGVLLLGDAYNMRHPLTGGGMTVAFK 426
Cdd:COG0644 194 gwvFP---------LGDGRVSVGIPLGGPRPRLV-GDGVLLVGDAAGFVDPLTGEGIHLAMK 245
|
|
| PRK07045 |
PRK07045 |
putative monooxygenase; Reviewed |
122-427 |
7.71e-17 |
|
putative monooxygenase; Reviewed
Pssm-ID: 136171 [Multi-domain] Cd Length: 388 Bit Score: 82.65 E-value: 7.71e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 122 NDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVE---GLDAQAVNGYmiH 198
Cdd:PRK07045 4 NPVDVLINGSGIAGVALAHLLGARGHSVTVVERAARNRAQNGADLLKPSGIGVVRAMGLLDDVFaagGLRRDAMRLY--H 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 199 DQEsksevqipfPL-SENNQVQSGRAFhhgrFIM----SLRKAAMA----EPNAKFIEGVVLQLLE--EDDAVMGVQYKD 267
Cdd:PRK07045 82 DKE---------LIaSLDYRSASALGY----FILipceQLRRLLLAkldgLPNVRLRFETSIERIErdADGTVTSVTLSD 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 268 KETgdikelHAPLTVV-ADGLFSKFRKSLI---SNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYQISSSETR 343
Cdd:PRK07045 149 GER------VAPTVLVgADGARSMIRDDVLrmpAERVPYATPMAFGTIALTDSVRECNRLYVDSNQGLAYFYPIGDQATR 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 344 VLV-----DVRGEMPRNLREYMVEKIYPQIPDHLKEPFLEATENSRLRSMPASFLPPSSVNKRGVLLLGDAYNMRHPLTG 418
Cdd:PRK07045 223 LVVsfpadEMQGYLADTTRTKLLARLNEFVGDESADAMAAIGAGTAFPLIPLGRMNLDRYHKRNVVLLGDAAHSIHPITG 302
|
....*....
gi 966959948 419 GGMTVAFKD 427
Cdd:PRK07045 303 QGMNLAIED 311
|
|
| PRK06185 |
PRK06185 |
FAD-dependent oxidoreductase; |
125-294 |
5.93e-13 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 235729 [Multi-domain] Cd Length: 407 Bit Score: 70.66 E-value: 5.93e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIE------RDLKepdrivGEFLQPGGYHVLKDLGLGDTVEGLDaqavngymiH 198
Cdd:PRK06185 8 DCCIVGGGPAGMMLGLLLARAGVDVTVLEkhadflRDFR------GDTVHPSTLELMDELGLLERFLELP---------H 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 199 DQESKSEVQIPfplseNNQVQS---GRAFHHGRFIM---------SLRKAAMAEPNAKFIEGV-VLQLLEEDDAVMGVQY 265
Cdd:PRK06185 73 QKVRTLRFEIG-----GRTVTLadfSRLPTPYPYIAmmpqwdfldFLAEEASAYPNFTLRMGAeVTGLIEEGGRVTGVRA 147
|
170 180
....*....|....*....|....*....
gi 966959948 266 KDKEtGDIkELHAPLTVVADGLFSKFRKS 294
Cdd:PRK06185 148 RTPD-GPG-EIRADLVVGADGRHSRVRAL 174
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
123-427 |
6.81e-12 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 66.97 E-value: 6.81e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 123 DPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDlkePDRIV---GEFLQPGGYHVLKDLGLGDTVegLDAQAVNGYMIHd 199
Cdd:pfam01494 1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERH---ATTSVlprAHGLNQRTMELLRQAGLEDRI--LAEGVPHEGMGL- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 200 qesksEVQIPFPLSENNQVQSGRAFH---HGRFIMSLRKAAMAEPnAKFIEGVVLQLLEEDDAVMGVQYKDKETGDIKEL 276
Cdd:pfam01494 75 -----AFYNTRRRADLDFLTSPPRVTvypQTELEPILVEHAEARG-AQVRFGTEVLSLEQDGDGVTAVVRDRRDGEEYTV 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 277 HAPLTVVADGLFSKFRKSL---ISNKVSVSSHFVG--FLMKNAPQFKANHA--ELILANPSPVLIYQISSSETR---VLV 346
Cdd:pfam01494 149 RAKYLVGCDGGRSPVRKTLgieFEGFEGVPFGSLDvlFDAPDLSDPVERAFvhYLIYAPHSRGFMVGPWRSAGReryYVQ 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 347 DVRGEMPRNLREymvekiyPQIPDHLKEPFLEATENSRLrsmPASFLPPSS--VNKR--------GVLLLGDAYNmRHPL 416
Cdd:pfam01494 229 VPWDEEVEERPE-------EFTDEELKQRLRSIVGIDLA---LVEILWKSIwgVASRvatryrkgRVFLAGDAAH-IHPP 297
|
330
....*....|..
gi 966959948 417 TGG-GMTVAFKD 427
Cdd:pfam01494 298 TGGqGLNTAIQD 309
|
|
| PRK08163 |
PRK08163 |
3-hydroxybenzoate 6-monooxygenase; |
120-307 |
2.81e-11 |
|
3-hydroxybenzoate 6-monooxygenase;
Pssm-ID: 181262 [Multi-domain] Cd Length: 396 Bit Score: 65.44 E-value: 2.81e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 120 SQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIErdlkEPDRIvGEF-----LQPGGYHVLKDLGLGDTVEGLdaqAV-N 193
Cdd:PRK08163 1 MTKVTPVLIVGGGIGGLAAALALARQGIKVKLLE----QAAEI-GEIgagiqLGPNAFSALDALGVGEAARQR---AVfT 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 194 GYMI-HDQESKSEV-QIPfplsennqvqSGRAF-----------HHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDDAv 260
Cdd:PRK08163 73 DHLTmMDAVDAEEVvRIP----------TGQAFrarfgnpyaviHRADIHLSLLEAVLDHPLVEFRTSTHVVGIEQDGD- 141
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 966959948 261 mGVQYKDKETgdiKELHAPLTVVADGLFSKFRKSLISNKVSVSSHFV 307
Cdd:PRK08163 142 -GVTVFDQQG---NRWTGDALIGCDGVKSVVRQSLVGDAPRVTGHVV 184
|
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
126-295 |
6.55e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 51.80 E-value: 6.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLGLGDTVEGLdAQAVNGYMIHDQESKSE 205
Cdd:PRK06847 7 VLIVGGGIGGLSAAIALRRAGIAVDLVEIDPEWRVYGAGITLQGNALRALRELGVLDECLEA-GFGFDGVDLFDPDGTLL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 206 VQIPFPLSENNQVQSG-----RAFHHgrfImsLRKAAMAEpNAKFIEGVVLQLLEEDDAVMGVQYKDKETGdikelHAPL 280
Cdd:PRK06847 86 AELPTPRLAGDDLPGGggimrPALAR---I--LADAARAA-GADVRLGTTVTAIEQDDDGVTVTFSDGTTG-----RYDL 154
|
170
....*....|....*
gi 966959948 281 TVVADGLFSKFRKSL 295
Cdd:PRK06847 155 VVGADGLYSKVRSLV 169
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
125-291 |
7.55e-07 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 51.24 E-value: 7.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIERD----------------------------------------LKEPDRIVG 164
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGddpgsgasgrnaglihpglrylepselarlalealdlweeLEEELGIDC 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 165 EFLQPGGYHVLKDLGLGDTVEGLDAQAVNGYMIH--DQESKSEVqipFPLSENNQ----VQSGRAFHHGRFIMSLRKAAM 238
Cdd:pfam01266 81 GFRRCGVLVLARDEEEEALEKLLAALRRLGVPAEllDAEELREL---EPLLPGLRgglfYPDGGHVDPARLLRALARAAE 157
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 966959948 239 AEpNAKFIEGVVLQLLEEDDAVMGVQykdkETGDIKELhapltVVADGLFSKF 291
Cdd:pfam01266 158 AL-GVRIIEGTEVTGIEEEGGVWGVV----TTGEADAV-----VNAAGAWADL 200
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
126-290 |
2.23e-06 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 49.90 E-value: 2.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERD---------------------------------LKEPDRIVGE------F 166
Cdd:COG0665 5 VVVIGGGIAGLSTAYHLARRGLDVTVLERGrpgsgasgrnagqlrpglaaladralvrlareaLDLWRELAAElgidcdF 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 167 LQPGGYHV-LKDLGLGDTVEGLDAQAVNGYmihDQE--SKSEVQIPFPLSENNQVQSG------RAFHHGRFIMSLRKAA 237
Cdd:COG0665 85 RRTGVLYLaRTEAELAALRAEAEALRALGL---PVEllDAAELREREPGLGSPDYAGGlydpddGHVDPAKLVRALARAA 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 966959948 238 mAEPNAKFIEGV-VLQLLEEDDAVMGVqykdkETGDiKELHAPLTVVADGLFSK 290
Cdd:COG0665 162 -RAAGVRIREGTpVTGLEREGGRVTGV-----RTER-GTVRADAVVLAAGAWSA 208
|
|
| TrkA |
COG0569 |
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion ... |
126-183 |
7.56e-06 |
|
Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and metabolism, Signal transduction mechanisms];
Pssm-ID: 440335 [Multi-domain] Cd Length: 296 Bit Score: 48.14 E-value: 7.56e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERDlkePDRIvgEFLQPGGYHV----------LKDLGLGDT 183
Cdd:COG0569 98 VIIIGAGRVGRSLARELEEEGHDVVVIDKD---PERV--ERLAEEDVLVivgdatdeevLEEAGIEDA 160
|
|
| COQ6 |
TIGR01989 |
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ... |
125-488 |
9.41e-06 |
|
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone
Pssm-ID: 273914 [Multi-domain] Cd Length: 437 Bit Score: 48.21 E-value: 9.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 125 EVIIVGAGVLGSALAAVLSRD----GRKVTVIERDlKEPDRIVGEFLQPGGY-------------HVLKDLGLGDTVEGL 187
Cdd:TIGR01989 2 DVVIVGGGPVGLALAAALGNNpltkDLKVLLLDAV-DNPKLKSRNYEKPDGPysnrvssitpasiSFFKKIGAWDHIQSD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 188 DAQAVNGYMIHDQESKSEVQipfplsennqvqsgraFHHGRFimslrkaamAEPNAKFIEGVVLQ------LLEEDDAVM 261
Cdd:TIGR01989 81 RIQPFGRMQVWDGCSLALIR----------------FDRDNG---------KEDMACIIENDNIQnslynrLQEYNGDNV 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 262 GVQYKDK--------------------ETGDIKELHAPLTVVADGLFSKFRKSliSNKVSVS-----SHFVGFLMKNAPQ 316
Cdd:TIGR01989 136 KILNPARlisvtipskypndnsnwvhiTLSDGQVLYTKLLIGADGSNSNVRKA--ANIDTTGwnynqHAVVATLKLEEAT 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 317 FKA------------------------------NHAELILANPSPVLIYQISSSetrvLVDVRGEMPR-NLREYMVEKIY 365
Cdd:TIGR01989 214 ENDvawqrflptgpiallplpdnnstlvwstspEEALRLLSLPPEDFVDALNAA----FDLGYSDHPYsYLLDYAMEKLN 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 366 PQIPdHLKE---------PFLEATENSRLRSMPASFLPPSSVNKRGVLLLGDAYNMRHPLTGGGMTVAFKDIK-LWRKLL 435
Cdd:TIGR01989 290 EDIG-FRTEgskscfqvpPRVIGVVDKSRAAFPLGLGHADEYVTKRVALVGDAAHRVHPLAGQGVNLGFGDVAsLVKALA 368
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 966959948 436 KGIPDLYDDAAIFEAKKsfYWERKASHSFVVNILAQALYELFSATDDSLHQLR 488
Cdd:TIGR01989 369 EAVSVGADIGSISSLKP--YERERYAKNVVLLGLVDKLHKLYATDFPPVVALR 419
|
|
| PRK07538 |
PRK07538 |
hypothetical protein; Provisional |
126-295 |
1.41e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 236046 [Multi-domain] Cd Length: 413 Bit Score: 47.58 E-value: 1.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIE--RDLKEPDriVGEFLQPGGYHVLKDLGLGDTvegLDAQAVNGYMI-----H 198
Cdd:PRK07538 3 VLIAGGGIGGLTLALTLHQRGIEVVVFEaaPELRPLG--VGINLLPHAVRELAELGLLDA---LDAIGIRTRELayfnrH 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 199 DQESKSEvqipfPLsennqvqsGRA---------FHHGRFIMSLRKAAMAEPNAKFIE-GVVLQLLEEDDAVMGVQYKDK 268
Cdd:PRK07538 78 GQRIWSE-----PR--------GLAagydwpqysIHRGELQMLLLDAVRERLGPDAVRtGHRVVGFEQDADVTVVFLGDR 144
|
170 180
....*....|....*....|....*..
gi 966959948 269 ETGDIKELHAPLTVVADGLFSKFRKSL 295
Cdd:PRK07538 145 AGGDLVSVRGDVLIGADGIHSAVRAQL 171
|
|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
115-295 |
3.33e-05 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 46.44 E-value: 3.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 115 STSTSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDlkepDRIVGeflQPGGYH-------VLKDLGLGDTVeGL 187
Cdd:PRK06183 2 AAQHPDAHDTDVVIVGAGPVGLTLANLLGQYGVRVLVLERW----PTLYD---LPRAVGiddealrVLQAIGLADEV-LP 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 188 DAQAVNGYMIHDQESKSEVQIPFPlsennqvqSGRafHHG---RFIMS-------LRKAAMAEPNAKFIEGV-VLQLLEE 256
Cdd:PRK06183 74 HTTPNHGMRFLDAKGRCLAEIARP--------STG--EFGwprRNAFHqplleavLRAGLARFPHVRVRFGHeVTALTQD 143
|
170 180 190
....*....|....*....|....*....|....*....
gi 966959948 257 DDAVMgVQYKDkETGDIKELHAPLTVVADGLFSKFRKSL 295
Cdd:PRK06183 144 DDGVT-VTLTD-ADGQRETVRARYVVGCDGANSFVRRTL 180
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
120-160 |
3.92e-05 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 46.29 E-value: 3.92e-05
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 966959948 120 SQNDPEVIIVGAGVLGSALAAVLSR-DGRKVTVIErdlKEPD 160
Cdd:COG0579 1 MMEMYDVVIIGAGIVGLALARELSRyEDLKVLVLE---KEDD 39
|
|
| PRK09126 |
PRK09126 |
FAD-dependent hydroxylase; |
126-295 |
5.81e-05 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236385 [Multi-domain] Cd Length: 392 Bit Score: 45.70 E-value: 5.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERD----LKEPD---RIVGefLQPGGYHVLKDLGLGDTVEG------LDAQAV 192
Cdd:PRK09126 6 IVVVGAGPAGLSFARSLAGSGLKVTLIERQplaaLADPAfdgREIA--LTHASREILQRLGAWDRIPEdeisplRDAKVL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 193 NGymihdqesksevQIPFPL---SENNQVQsgrafHHGRFIMS--LRKAAMAE----PNAKFIEGVVLQLLEEDDAVMGV 263
Cdd:PRK09126 84 NG------------RSPFALtfdARGRGAD-----ALGYLVPNhlIRRAAYEAvsqqDGIELLTGTRVTAVRTDDDGAQV 146
|
170 180 190
....*....|....*....|....*....|..
gi 966959948 264 QYKDKETgdikeLHAPLTVVADGLFSKFRKSL 295
Cdd:PRK09126 147 TLANGRR-----LTARLLVAADSRFSATRRQL 173
|
|
| trkA |
PRK09496 |
Trk system potassium transporter TrkA; |
126-194 |
6.78e-05 |
|
Trk system potassium transporter TrkA;
Pssm-ID: 236541 [Multi-domain] Cd Length: 453 Bit Score: 45.50 E-value: 6.78e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERDlkePDRIvgEFLQpggyhvlkdlglgdtvEGLDAQAVNG 194
Cdd:PRK09496 3 IIIVGAGQVGYTLAENLSGENNDVTVIDTD---EERL--RRLQ----------------DRLDVRTVVG 50
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
126-191 |
7.49e-05 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 45.19 E-value: 7.49e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERD---LKEPDRIVGEFLQpggyHVLKDLG----LGDTVEGLDAQA 191
Cdd:COG0446 127 AVVIGGGPIGLELAEALRKRGLKVTLVERAprlLGVLDPEMAALLE----EELREHGvelrLGETVVAIDGDD 195
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
128-194 |
8.64e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 45.26 E-value: 8.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 128 IVGAGVLGSALAAVLSRDGRKVTVIERDlkepDRIVG-----EFlqpGG------YH-----------VLKDLGLGDTV- 184
Cdd:PRK07233 4 IVGGGIAGLAAAYRLAKRGHEVTVFEAD----DQLGGlaasfEF---GGlpierfYHhifksdealleLLDELGLEDKLr 76
|
90
....*....|..
gi 966959948 185 --EGLDAQAVNG 194
Cdd:PRK07233 77 wrETKTGYYVDG 88
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
128-154 |
1.40e-04 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 40.21 E-value: 1.40e-04
10 20
....*....|....*....|....*..
gi 966959948 128 IVGAGVLGSALAAVLSRDGRKVTVIER 154
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEK 27
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
126-168 |
1.96e-04 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 40.27 E-value: 1.96e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIER---DLKEPDRIVGEFLQ 168
Cdd:pfam00070 2 VVVVGGGYIGLELAGALARLGSKVTVVERrdrLLPGFDPEIAKILQ 47
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
125-155 |
2.52e-04 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 44.07 E-value: 2.52e-04
10 20 30
....*....|....*....|....*....|.
gi 966959948 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIERD 155
Cdd:PRK01747 262 DAAIIGGGIAGAALALALARRGWQVTLYEAD 292
|
|
| TrkA_N |
pfam02254 |
TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include ... |
126-175 |
2.65e-04 |
|
TrkA-N domain; This domain is found in a wide variety of proteins. These proteins include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.
Pssm-ID: 426679 [Multi-domain] Cd Length: 115 Bit Score: 40.59 E-value: 2.65e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGrKVTVIERDlkePDRIvgEFLQPGGYHVL 175
Cdd:pfam02254 1 IIIIGYGRVGRSLAEELSEGG-DVVVIDKD---EERV--EELREEGVPVV 44
|
|
| ubiF |
PRK08020 |
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed |
120-293 |
3.56e-04 |
|
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
Pssm-ID: 181199 [Multi-domain] Cd Length: 391 Bit Score: 43.05 E-value: 3.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 120 SQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDL-------KEPD-RIVGefLQPGGYHVLKDLGLGDTVEGL---- 187
Cdd:PRK08020 2 TNQPTDIAIVGGGMVGAALALGLAQHGFSVAVLEHAApapfdadSQPDvRISA--ISAASVALLKGLGVWDAVQAMrshp 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 188 ----------------DAQAVN----GYMIhdqesksevqipfplsENNQVQsgrafhhgrfiMSLRKAAMAEPNAKFIE 247
Cdd:PRK08020 80 yrrletwewetahvvfDAAELKlpelGYMV----------------ENRVLQ-----------LALWQALEAHPNVTLRC 132
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 966959948 248 GVVLQLLEEDDAVMGVQYKDKEtgdikELHAPLTVVADGLFSKFRK 293
Cdd:PRK08020 133 PASLQALQRDDDGWELTLADGE-----EIQAKLVIGADGANSQVRQ 173
|
|
| PRK06184 |
PRK06184 |
hypothetical protein; Provisional |
121-184 |
4.31e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235728 [Multi-domain] Cd Length: 502 Bit Score: 43.05 E-value: 4.31e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 966959948 121 QNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERdLKEP---DRivGEFLQPGGYHVLKDLGLGDTV 184
Cdd:PRK06184 1 YTTTDVLIVGAGPTGLTLAIELARRGVSFRLIEK-APEPfpgSR--GKGIQPRTQEVFDDLGVLDRV 64
|
|
| PRK08277 |
PRK08277 |
D-mannonate oxidoreductase; Provisional |
126-171 |
5.58e-04 |
|
D-mannonate oxidoreductase; Provisional
Pssm-ID: 236216 [Multi-domain] Cd Length: 278 Bit Score: 42.19 E-value: 5.58e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGG 171
Cdd:PRK08277 14 VITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGG 59
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
126-179 |
6.87e-04 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 41.92 E-value: 6.87e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIE---RDLKEPDRIVGEFLQpggyHVLKDLG 179
Cdd:pfam07992 155 VVVVGGGYIGVELAAALAKLGKEVTLIEaldRLLRAFDEEISAALE----KALEKNG 207
|
|
| PRK07588 |
PRK07588 |
FAD-binding domain; |
126-293 |
6.91e-04 |
|
FAD-binding domain;
Pssm-ID: 169028 [Multi-domain] Cd Length: 391 Bit Score: 42.03 E-value: 6.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIER--DLKEPDRIVgEFLQPgGYHVLKDLGLGDTVEGLDAQAVNgymIHDQESK 203
Cdd:PRK07588 3 VAISGAGIAGPTLAYWLRRYGHEPTLIERapELRTGGYMV-DFWGV-GYEVAKRMGITDQLREAGYQIEH---VRSVDPT 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 204 SEVQIPFplsennQVQSGRAFHHGRFImSLRKAAMAEPNAKFIEGVVLQLL--------EEDDAV-MGVQYKDKETGDik 274
Cdd:PRK07588 78 GRRKADL------NVDSFRRMVGDDFT-SLPRGDLAAAIYTAIDGQVETIFddsiatidEHRDGVrVTFERGTPRDFD-- 148
|
170
....*....|....*....
gi 966959948 275 elhapLTVVADGLFSKFRK 293
Cdd:PRK07588 149 -----LVIGADGLHSHVRR 162
|
|
| BetA |
COG2303 |
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ... |
126-154 |
7.39e-04 |
|
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway
Pssm-ID: 441878 [Multi-domain] Cd Length: 531 Bit Score: 42.51 E-value: 7.39e-04
10 20 30
....*....|....*....|....*....|
gi 966959948 126 VIIVGAGVLGSALAAVLSRD-GRKVTVIER 154
Cdd:COG2303 7 YVIVGAGSAGCVLANRLSEDaGLRVLLLEA 36
|
|
| PRK07333 |
PRK07333 |
ubiquinone biosynthesis hydroxylase; |
126-293 |
7.44e-04 |
|
ubiquinone biosynthesis hydroxylase;
Pssm-ID: 180935 [Multi-domain] Cd Length: 403 Bit Score: 42.27 E-value: 7.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 126 VIIVGAGVLGSALAAVLsRDGR---KVTVIERDLKEP--DRIVGEFLQPGGYHVLKDLGLGDTVEGlDAQAVNGYMIHDQ 200
Cdd:PRK07333 4 VVIAGGGYVGLALAVAL-KQAAphlPVTVVDAAPAGAwsRDPRASAIAAAARRMLEALGVWDEIAP-EAQPITDMVITDS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 201 ESKSEVQiPFPLSENNQVQSGRAFHH----GRFIMSLRKAAMAEpNAKFIEGVVLQLLEEDDAVMGVQYKDKETgdikeL 276
Cdd:PRK07333 82 RTSDPVR-PVFLTFEGEVEPGEPFAHmvenRVLINALRKRAEAL-GIDLREATSVTDFETRDEGVTVTLSDGSV-----L 154
|
170
....*....|....*..
gi 966959948 277 HAPLTVVADGLFSKFRK 293
Cdd:PRK07333 155 EARLLVAADGARSKLRE 171
|
|
| PRK10157 |
PRK10157 |
putative oxidoreductase FixC; Provisional |
125-308 |
9.07e-04 |
|
putative oxidoreductase FixC; Provisional
Pssm-ID: 182273 [Multi-domain] Cd Length: 428 Bit Score: 41.82 E-value: 9.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIERdlkepdrivGEFlqPGGYHV----LKDLGLGDTVEGLDAQA-VNGYMIHD 199
Cdd:PRK10157 7 DAIIVGAGLAGSVAALVLAREGAQVLVIER---------GNS--AGAKNVtggrLYAHSLEHIIPGFADSApVERLITHE 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 200 QES----KSEVQIPFpLSENNQVQSGRAFH--HGRFIMSLRKAAmAEPNAKFIEGV-VLQLLEEDDAVMGVQykdkETGD 272
Cdd:PRK10157 76 KLAfmteKSAMTMDY-CNGDETSPSQRSYSvlRSKFDAWLMEQA-EEAGAQLITGIrVDNLVQRDGKVVGVE----ADGD 149
|
170 180 190
....*....|....*....|....*....|....*..
gi 966959948 273 IKElhAPLTVVADGLFSKFRKSL-ISNKVSVSSHFVG 308
Cdd:PRK10157 150 VIE--AKTVILADGVNSILAEKLgMAKRVKPTDVAVG 184
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
126-154 |
1.22e-03 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 41.76 E-value: 1.22e-03
10 20
....*....|....*....|....*....
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIER 154
Cdd:COG1233 6 VVVIGAGIGGLAAAALLARAGYRVTVLEK 34
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
126-188 |
1.32e-03 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 41.28 E-value: 1.32e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERDlkepDRI--------VGEFLQpggyHVLKDLG----LGDTVEGLD 188
Cdd:COG1251 145 VVVIGGGLIGLEAAAALRKRGLEVTVVERA----PRLlprqldeeAGALLQ----RLLEALGvevrLGTGVTEIE 211
|
|
| PRK00711 |
PRK00711 |
D-amino acid dehydrogenase; |
125-154 |
1.33e-03 |
|
D-amino acid dehydrogenase;
Pssm-ID: 234819 [Multi-domain] Cd Length: 416 Bit Score: 41.32 E-value: 1.33e-03
10 20 30
....*....|....*....|....*....|
gi 966959948 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIER 154
Cdd:PRK00711 2 RVVVLGSGVIGVTSAWYLAQAGHEVTVIDR 31
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
126-166 |
1.51e-03 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 41.32 E-value: 1.51e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERdlkePDRIVGEF 166
Cdd:PRK06292 172 LAVIGGGVIGLELGQALSRLGVKVTVFER----GDRILPLE 208
|
|
| Kch |
COG1226 |
Voltage-gated potassium channel Kch [Inorganic ion transport and metabolism]; |
126-175 |
1.58e-03 |
|
Voltage-gated potassium channel Kch [Inorganic ion transport and metabolism];
Pssm-ID: 440839 [Multi-domain] Cd Length: 279 Bit Score: 40.87 E-value: 1.58e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERDlkePDRIvgEFLQPGGYHVL 175
Cdd:COG1226 127 VIIAGFGRVGQIVARLLRAEGIPFVVIDLD---PERV--EELRRFGIKVY 171
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
124-210 |
1.92e-03 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 40.84 E-value: 1.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 124 PE-VIIVGAGVLGSALAAVLSRDGRKVTVIERD---LKEPDRIVGEFLQpggyHVLKDLG----LGDTVEGLDAQAvNGY 195
Cdd:COG1249 168 PKsLVVIGGGYIGLEFAQIFARLGSEVTLVERGdrlLPGEDPEISEALE----KALEKEGidilTGAKVTSVEKTG-DGV 242
|
90
....*....|....*
gi 966959948 196 MIHDQESKSEVQIPF 210
Cdd:COG1249 243 TVTLEDGGGEEAVEA 257
|
|
| PanE |
COG1893 |
Ketopantoate reductase [Coenzyme transport and metabolism]; Ketopantoate reductase is part of ... |
128-184 |
2.34e-03 |
|
Ketopantoate reductase [Coenzyme transport and metabolism]; Ketopantoate reductase is part of the Pathway/BioSystem: Pantothenate/CoA biosynthesis
Pssm-ID: 441497 [Multi-domain] Cd Length: 305 Bit Score: 40.23 E-value: 2.34e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 966959948 128 IVGAGVLGSALAAVLSRDGRKVTVIERdlkePDRIvgEFLQPGGYHVLKDLGLGDTV 184
Cdd:COG1893 5 ILGAGAIGGLLGARLARAGHDVTLVAR----GAHA--EALRENGLRLESPDGDRTTV 55
|
|
| PRK08850 |
PRK08850 |
2-octaprenyl-6-methoxyphenol hydroxylase; Validated |
125-202 |
3.03e-03 |
|
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Pssm-ID: 236341 [Multi-domain] Cd Length: 405 Bit Score: 40.14 E-value: 3.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 125 EVIIVGAGVLGSALAAVLSRDGRKVTVIERDLKE------PDRIVGEfLQPGGYHVLKDLGLGDTVEGLDAQAVNGYMIH 198
Cdd:PRK08850 6 DVAIIGGGMVGLALAAALKESDLRIAVIEGQLPEealnelPDVRVSA-LSRSSEHILRNLGAWQGIEARRAAPYIAMEVW 84
|
....
gi 966959948 199 DQES 202
Cdd:PRK08850 85 EQDS 88
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
120-155 |
3.05e-03 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 40.55 E-value: 3.05e-03
10 20 30
....*....|....*....|....*....|....*.
gi 966959948 120 SQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERD 155
Cdd:COG3573 2 AAMDADVIVVGAGLAGLVAAAELADAGRRVLLLDQE 37
|
|
| PRK09754 |
PRK09754 |
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional |
95-153 |
4.15e-03 |
|
phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional
Pssm-ID: 170080 [Multi-domain] Cd Length: 396 Bit Score: 39.91 E-value: 4.15e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 966959948 95 ARRRR------KGTNISETTLIGAAASTSTSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIE 153
Cdd:PRK09754 110 AAARPlplldaLGERCFTLRHAGDAARLREVLQPERSVVIVGAGTIGLELAASATQRRCKVTVIE 174
|
|
| PRK07494 |
PRK07494 |
UbiH/UbiF family hydroxylase; |
117-295 |
4.15e-03 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181001 [Multi-domain] Cd Length: 388 Bit Score: 39.89 E-value: 4.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 117 STSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPgGYHVLKDLGLGDTVEGlDAQAVNGYM 196
Cdd:PRK07494 1 SLMEKEHTDIAVIGGGPAGLAAAIALARAGASVALVAPEPPYADLRTTALLGP-SIRFLERLGLWARLAP-HAAPLQSMR 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 197 IHDQESKsEVQIP---FPLSENNQVQSGRAFHHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDDAVMgVQYKDKETgdi 273
Cdd:PRK07494 79 IVDATGR-LIRAPevrFRAAEIGEDAFGYNIPNWLLNRALEARVAELPNITRFGDEAESVRPREDEVT-VTLADGTT--- 153
|
170 180
....*....|....*....|..
gi 966959948 274 keLHAPLTVVADGLFSKFRKSL 295
Cdd:PRK07494 154 --LSARLVVGADGRNSPVREAA 173
|
|
| PRK07364 |
PRK07364 |
FAD-dependent hydroxylase; |
116-153 |
4.65e-03 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236001 [Multi-domain] Cd Length: 415 Bit Score: 39.62 E-value: 4.65e-03
10 20 30
....*....|....*....|....*....|....*...
gi 966959948 116 TSTSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIE 153
Cdd:PRK07364 11 LPSTRSLTYDVAIVGGGIVGLTLAAALKDSGLRIALIE 48
|
|
| COG3380 |
COG3380 |
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]; |
124-154 |
5.21e-03 |
|
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
Pssm-ID: 442607 [Multi-domain] Cd Length: 331 Bit Score: 39.09 E-value: 5.21e-03
10 20 30
....*....|....*....|....*....|.
gi 966959948 124 PEVIIVGAGVLGSALAAVLSRDGRKVTVIER 154
Cdd:COG3380 4 PDIAIIGAGIAGLAAARALQDAGHEVTVFEK 34
|
|
| PRK07688 |
PRK07688 |
thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated |
122-155 |
5.30e-03 |
|
thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Pssm-ID: 181084 [Multi-domain] Cd Length: 339 Bit Score: 39.21 E-value: 5.30e-03
10 20 30
....*....|....*....|....*....|....*
gi 966959948 122 NDPEVIIVGAGVLGSALAAVLSRDG-RKVTVIERD 155
Cdd:PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGvGKVTIVDRD 57
|
|
| Sacchrp_dh_NADP |
pfam03435 |
Saccharopine dehydrogenase NADP binding domain; This family contains the NADP binding domain ... |
126-163 |
5.79e-03 |
|
Saccharopine dehydrogenase NADP binding domain; This family contains the NADP binding domain of saccharopine dehydrogenase. In some organizms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase.
Pssm-ID: 397480 [Multi-domain] Cd Length: 120 Bit Score: 37.18 E-value: 5.79e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 966959948 126 VIIVGAGVLGSALAAVLSRDG--RKVTVIERDLKEPDRIV 163
Cdd:pfam03435 1 VLIIGAGSVGQGVAPLLARHFdvDRITVADRTLEKAQALA 40
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
127-156 |
6.71e-03 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 39.03 E-value: 6.71e-03
10 20 30
....*....|....*....|....*....|
gi 966959948 127 IIVGAGVLGSALAAVLSRDGRKVTVIERDL 156
Cdd:PRK06370 9 IVIGAGQAGPPLAARAAGLGMKVALIERGL 38
|
|
| PRK04965 |
PRK04965 |
NADH:flavorubredoxin reductase NorW; |
126-191 |
6.82e-03 |
|
NADH:flavorubredoxin reductase NorW;
Pssm-ID: 179902 [Multi-domain] Cd Length: 377 Bit Score: 39.13 E-value: 6.82e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 966959948 126 VIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLKDLG----LGDTVEGLDAQA 191
Cdd:PRK04965 144 VLVVGGGLIGTELAMDLCRAGKAVTLVDNAASLLASLMPPEVSSRLQHRLTEMGvhllLKSQLQGLEKTD 213
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
118-154 |
8.27e-03 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 38.69 E-value: 8.27e-03
10 20 30
....*....|....*....|....*....|....*..
gi 966959948 118 TSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIER 154
Cdd:COG2072 1 TAATEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEK 37
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
118-155 |
8.62e-03 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 38.75 E-value: 8.62e-03
10 20 30
....*....|....*....|....*....|....*....
gi 966959948 118 TSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIE-RD 155
Cdd:COG1231 2 SRRARGKDVVIVGAGLAGLAAARELRKAGLDVTVLEaRD 40
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
124-182 |
9.20e-03 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 38.66 E-value: 9.20e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 966959948 124 PEVIIVGAGVLGSALAAVLSRDGRKVTVIERDlkepDRI--------VGEFLQPGGYHV-----------LKDLGLGD 182
Cdd:COG1232 2 KRVAVIGGGIAGLTAAYRLAKAGHEVTVLEAS----DRVgglirtveVDGFRIDRGPHSfltrdpevlelLRELGLGD 75
|
|
| PRK12475 |
PRK12475 |
thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional |
123-158 |
9.45e-03 |
|
thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Pssm-ID: 183547 [Multi-domain] Cd Length: 338 Bit Score: 38.56 E-value: 9.45e-03
10 20 30
....*....|....*....|....*....|....*..
gi 966959948 123 DPEVIIVGAGVLGSALAAVLSRDG-RKVTVIERDLKE 158
Cdd:PRK12475 24 EKHVLIVGAGALGAANAEALVRAGiGKLTIADRDYVE 60
|
|
| |
