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Conserved domains on  [gi|768006885|ref|XP_011524832|]
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proline and serine-rich protein 3 isoform X3 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 267-616 4.83e-07

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.79  E-value: 4.83e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  267 PTPAPAPASSQAPLRPeddilyqwRQRRKLEQAQGSKGDRAWVPPLTPALRTLTSPAPVETLSSLGTQPNHVPLWSSVAQ 346
Cdd:PHA03247 2569 PPPRPAPRPSEPAVTS--------RARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDP 2640

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  347 PGPPEAFYVERPPF----PSVSSPHIFWAPSSHGFFWAPQSGpWVSLGAVPPTQQASTLAHLGSTLAPPASLASTLEPPA 422
Cdd:PHA03247 2641 HPPPTVPPPERPRDdpapGRVSRPRRARRLGRAAQASSPPQR-PRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSAT 2719

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  423 STP-APLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGP 501
Cdd:PHA03247 2720 PLPpGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLP 2799

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  502 GPQlrgVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSpkVQATQPQTKVTPPPSESQC-----------RAKAESLKAK 570
Cdd:PHA03247 2800 SPW---DPADPPAAVLAPAAALPPAASPAGPLPPPTSA--QPTAPPPPPGPPPPSLPLGgsvapggdvrrRPPSRSPAAK 2874

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 768006885  571 ALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 616
Cdd:PHA03247 2875 PAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQ 2920
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 267-616 4.83e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.79  E-value: 4.83e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  267 PTPAPAPASSQAPLRPeddilyqwRQRRKLEQAQGSKGDRAWVPPLTPALRTLTSPAPVETLSSLGTQPNHVPLWSSVAQ 346
Cdd:PHA03247 2569 PPPRPAPRPSEPAVTS--------RARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDP 2640

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  347 PGPPEAFYVERPPF----PSVSSPHIFWAPSSHGFFWAPQSGpWVSLGAVPPTQQASTLAHLGSTLAPPASLASTLEPPA 422
Cdd:PHA03247 2641 HPPPTVPPPERPRDdpapGRVSRPRRARRLGRAAQASSPPQR-PRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSAT 2719

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  423 STP-APLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGP 501
Cdd:PHA03247 2720 PLPpGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLP 2799

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  502 GPQlrgVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSpkVQATQPQTKVTPPPSESQC-----------RAKAESLKAK 570
Cdd:PHA03247 2800 SPW---DPADPPAAVLAPAAALPPAASPAGPLPPPTSA--QPTAPPPPPGPPPPSLPLGgsvapggdvrrRPPSRSPAAK 2874

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 768006885  571 ALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 616
Cdd:PHA03247 2875 PAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQ 2920
PAT1 pfam09770
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ...
 267-415 6.12e-03

Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.


Pssm-ID: 401645 [Multi-domain]  Cd Length: 846  Bit Score: 40.02  E-value: 6.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  267 PTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRtltspAPVETLsslgTQPNHVPLWSSVAQ 346
Cdd:pfam09770 210 PAQQPAPAPAQPPAAPPAQQAQQQQQFPPQIQQQQQPQQQPQQPQQHPGQG-----HPVTIL----QRPQSPQPDPAQPS 280

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 768006885  347 PGPPEAFYVERPPFPSVSSPHIFWAPSSHGFFWAPQSGPWVSLGAVPPTQQA----STLAHLGSTLAPPASLA 415
Cdd:pfam09770 281 IQPQAQQFHQQPPPVPVQPTQILQNPNRLSAARVGYPQNPQPGVQPAPAHQAhrqqGSFGRQAPIITHPQQLA 353
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 267-616 4.83e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.79  E-value: 4.83e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  267 PTPAPAPASSQAPLRPeddilyqwRQRRKLEQAQGSKGDRAWVPPLTPALRTLTSPAPVETLSSLGTQPNHVPLWSSVAQ 346
Cdd:PHA03247 2569 PPPRPAPRPSEPAVTS--------RARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDP 2640

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  347 PGPPEAFYVERPPF----PSVSSPHIFWAPSSHGFFWAPQSGpWVSLGAVPPTQQASTLAHLGSTLAPPASLASTLEPPA 422
Cdd:PHA03247 2641 HPPPTVPPPERPRDdpapGRVSRPRRARRLGRAAQASSPPQR-PRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSAT 2719

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  423 STP-APLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGP 501
Cdd:PHA03247 2720 PLPpGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLP 2799

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  502 GPQlrgVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSpkVQATQPQTKVTPPPSESQC-----------RAKAESLKAK 570
Cdd:PHA03247 2800 SPW---DPADPPAAVLAPAAALPPAASPAGPLPPPTSA--QPTAPPPPPGPPPPSLPLGgsvapggdvrrRPPSRSPAAK 2874

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 768006885  571 ALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPPAFQ 616
Cdd:PHA03247 2875 PAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQ 2920
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 393-512 7.66e-07

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 52.79  E-value: 7.66e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 393 PPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLA-CTPAPPASTLASPAVPQGLPI------- 464
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAApPAAAPPAPVAAPAAAAPAAAPaaapaav 445

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 768006885 465 ---PDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQV 512
Cdd:PRK14951 446 alaPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDV 496
PHA03247 PHA03247
large tegument protein UL36; Provisional
 233-613 1.10e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.55  E-value: 1.10e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  233 SDGLSPFSETFIPDSSKGLGPRAPASPAPAQaqtptPAPAPASSQAPLRPEDDILYQWrqRRKLEQ-AQGSKGDRAwvPP 311
Cdd:PHA03247 2484 AEARFPFAAGAAPDPGGGGPPDPDAPPAPSR-----LAPAILPDEPVGEPVHPRMLTW--IRGLEElASDDAGDPP--PP 2554

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  312 LTPALRTLTSPAPVETlSSLGTQPNHVPLWSSVAQPGPPEAFYVERPPFPSVSSPHIFWAPSShgffwAPQSGPWVSLGA 391
Cdd:PHA03247 2555 LPPAAPPAAPDRSVPP-PRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSP-----LPPDTHAPDPPP 2628

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  392 VPPTQQASTLAHLGSTLAPPASLASTLEPP--------ASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLP 463
Cdd:PHA03247 2629 PSPSPAANEPDPHPPPTVPPPERPRDDPAPgrvsrprrARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTP 2708

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  464 IPDPS--SCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPgpqlrgvlgqvvaarLFPDSLEDTPPHFEGPPPPKAGSPK 541
Cdd:PHA03247 2709 EPAPHalVSATPLPPGPAAARQASPALPAAPAPPAVPAGP---------------ATPGGPARPARPPTTAGPPAPAPPA 2773

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 768006885  542 VQATQPQTKVTPPPSESQCRAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPAEQATTVKASPP 613
Cdd:PHA03247 2774 APAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGP 2845
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
390-602 1.76e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 48.33  E-value: 1.76e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 390 GAVPPTQQASTLAhlgsTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSS 469
Cdd:PRK12323 371 GAGPATAAAAPVA----QPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGG 446

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 470 CAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSPKVQAtqpQT 549
Cdd:PRK12323 447 APAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGW---VA 523

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 768006885 550 KVTPPPSESQCRAKAESLKAKALPPAAGSVIRKSEATPSPGACLQPEVPLSPA 602
Cdd:PRK12323 524 ESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDM 576
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 380-515 2.91e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 47.40  E-value: 2.91e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 380 APQSGPWVSLGAVPPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTlAPPASTPAPLACTPAPPAstlasPAVP 459
Cdd:PRK14951 384 PEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPA-AAPAAAPAAVALAPAPPA-----QAAP 457

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 768006885 460 QGLPIPDPsscAQPKSLGPKSRRSRAPRPEAAEQVPAAgqgPGPQLRGVLGQVVAA 515
Cdd:PRK14951 458 ETVAIPVR---VAPEPAVASAAPAPAAAPAAARLTPTE---EGDVWHATVQQLAAA 507
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 419-513 5.19e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 47.19  E-value: 5.19e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  419 EPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSlgpksrrSRAPRPEAAEQVPAAG 498
Cdd:PRK12270   40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAP-------AAPPAAAAAAAPAAAA 112

                          90
                  ....*....|....*.
gi 768006885  499 QGPGPQ-LRGVLGQVV 513
Cdd:PRK12270  113 VEDEVTpLRGAAAAVA 128
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
344-516 1.04e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 46.02  E-value: 1.04e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 344 VAQPGPPEAFYVERPPFPSVSSPHIFWAPSSHGFFWAPQSGPwvslGAVPPTQQASTLAHLGSTLAPPASLASTLEPPAs 423
Cdd:PRK12323 382 VAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAP----ARRSPAPEALAAARQASARGPGGAPAPAPAPAA- 456

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 424 TPAPLASTLAPPASTPAPLACTPAPPASTLASPA-----------VPQGLPIPDP----SSCAQPKSLGPKSRRSRAPRP 488
Cdd:PRK12323 457 APAAAARPAAAGPRPVAAAAAAAPARAAPAAAPApadddpppweeLPPEFASPAPaqpdAAPAGWVAESIPDPATADPDD 536

                        170       180
                 ....*....|....*....|....*...
gi 768006885 489 EAAEQVPAAGQGPGPQLRGVLGQVVAAR 516
Cdd:PRK12323 537 AFETLAPAPAAAPAPRAAAATEPVVAPR 564
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
389-494 1.88e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 44.77  E-value: 1.88e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 389 LGAVPPTQQASTLAHLGStlapPASLASTLEPPASTPAPLASTLAPPASTPAPLAcTPAPPASTLASPAVPQGLPIPDPS 468
Cdd:PRK14971 384 TQPAAAPQPSAAAAASPS----PSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAA-VPVNPPSTAPQAVRPAQFKEEKKI 458

                         90       100
                 ....*....|....*....|....*.
gi 768006885 469 SCAQPKSLGPKSRRsraPRPEAAEQV 494
Cdd:PRK14971 459 PVSKVSSLGPSTLR---PIQEKAEQA 481
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
371-504 3.36e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 44.07  E-value: 3.36e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 371 APSSHGFFWAPQSGPWVSLGAVPPTQQASTLAHLGSTLAPPASLA-----STLEPPASTPAPLASTLAPPASTPAPLACT 445
Cdd:PRK07003 387 AAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAppataDRGDDAADGDAPVPAKANARASADSRCDER 466

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 768006885 446 PAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQ 504
Cdd:PRK07003 467 DAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAA 525
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 390-579 3.39e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.21  E-value: 3.39e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 390 GAVPPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAV-----PQGLPI 464
Cdd:PRK07764 594 AAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAsdggdGWPAKA 673

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 465 PDPSSCAQPKSLGPKSRRSRAPRPEAAEQ-----VPAAGQGPGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGS 539
Cdd:PRK07764 674 GGAAPAAPPPAPAPAAPAAPAGAAPAQPApapaaTPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAG 753

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 768006885 540 PKVQATQPQTKVTPPPSESQCRAKAESLKAKALPPAAGSV 579
Cdd:PRK07764 754 APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSM 793
PHA03247 PHA03247
large tegument protein UL36; Provisional
 347-619 6.16e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.77  E-value: 6.16e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  347 PGPPEAFYVERPPFPSVSSPHIFwAPSSHGFFWAPQSGPWV----------SLGAVPPTQQASTLAHLGSTLAPPASLAS 416
Cdd:PHA03247 2498 PGGGGPPDPDAPPAPSRLAPAIL-PDEPVGEPVHPRMLTWIrgleelasddAGDPPPPLPPAAPPAAPDRSVPPPRPAPR 2576

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  417 TLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPK-SLGPKSRRSRAPRPEAAEQVP 495
Cdd:PHA03247 2577 PSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAaNEPDPHPPPTVPPPERPRDDP 2656

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  496 AAGQGPGPQLRGVLGQVVAA---------RLFPDSLEDTPPHFEGPPPPKAGSPKVQATQPQTKVTPPPSESQCRAKAES 566
Cdd:PHA03247 2657 APGRVSRPRRARRLGRAAQAssppqrprrRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALP 2736

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 768006885  567 LKAKALPPAAGSVIRKSEATP-SPGACLQPEVPLSPAEQATTVKASPPAFQVGS 619
Cdd:PHA03247 2737 AAPAPPAVPAGPATPGGPARPaRPPTTAGPPAPAPPAAPAAGPPRRLTRPAVAS 2790
PHA03247 PHA03247
large tegument protein UL36; Provisional
 238-515 6.87e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.39  E-value: 6.87e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  238 PFSETFIPDSSKGLGPRAPASPAPAQAQTPTPAPAPASSQAPLRPeddilyqwRQRRKLEQAQGSKGDRAWVPPLTPALR 317
Cdd:PHA03247 2710 PAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGP--------ARPARPPTTAGPPAPAPPAAPAAGPPR 2781

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  318 TLTSPAPVETLSSLGTQPN-HVPLWSSVAQPGPPEAFYVERPPFPSVSSPHIFwAPSSHGFFWAPQSGPWVSLGAVPPtq 396
Cdd:PHA03247 2782 RLTRPAVASLSESRESLPSpWDPADPPAAVLAPAAALPPAASPAGPLPPPTSA-QPTAPPPPPGPPPPSLPLGGSVAP-- 2858

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  397 qASTLAHLGSTLAPPASLASTLEPPAS---------TPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDP 467
Cdd:PHA03247 2859 -GGDVRRRPPSRSPAAKPAAPARPPVRrlarpavsrSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPP 2937

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 768006885  468 SSCAQPkslgpksrrsrAPRPEAAEQVPAAGQGPGPQLRGVLGQVVAA 515
Cdd:PHA03247 2938 RPQPPL-----------APTTDPAGAGEPSGAVPQPWLGALVPGRVAV 2974
PRK11855 PRK11855
dihydrolipoamide acetyltransferase; Reviewed
 405-505 1.60e-03

dihydrolipoamide acetyltransferase; Reviewed


Pssm-ID: 237000 [Multi-domain]  Cd Length: 547  Bit Score: 41.73  E-value: 1.60e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 405 GSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQ-----GLPIpdpsscAQPKSLGPK 479
Cdd:PRK11855 196 AAAPAAAAAPAAAAPAAAAAAAPAPAPAAAAAPAAAAPAAAAAPGKAPHASPAVRRlarelGVDL------SQVKGTGKK 269

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 768006885 480 SR----------RSRAPRPEAAEQVPAAGQGPGPQL 505
Cdd:PRK11855 270 GRitkedvqafvKGAMSAAAAAAAAAAAAGGGGLGL 305
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
421-614 2.10e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 41.76  E-value: 2.10e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 421 PASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQG 500
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRG 439

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 501 PGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSPKVQATQPQTKVTPPPSESQCRAKAESLKAKALPPAAGSvi 580
Cdd:PRK07003 440 DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAAS-- 517

                        170       180       190
                 ....*....|....*....|....*....|....
gi 768006885 581 RKSEATPspgaclqPEVPLSPAEQATTVKASPPA 614
Cdd:PRK07003 518 REDAPAA-------AAPPAPEARPPTPAAAAPAA 544
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
267-464 2.30e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 41.40  E-value: 2.30e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 267 PTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAwvPPLTPALRTLTSPAPVETLSSLGTQPnhvplwSSVAQ 346
Cdd:PRK12323 413 AAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPA--PAAAPAAAARPAAAGPRPVAAAAAAA------PARAA 484

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 347 PGPPEAFYVERPPfPSVSSPHIFWAPSSHGFfwAPQSGPWVSLGAVPPTQQASTLAHLGSTLAPPAslastleppASTPA 426
Cdd:PRK12323 485 PAAAPAPADDDPP-PWEELPPEFASPAPAQP--DAAPAGWVAESIPDPATADPDDAFETLAPAPAA---------APAPR 552

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 768006885 427 PLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPI 464
Cdd:PRK12323 553 AAAATEPVVAPRPPRASASGLPDMFDGDWPALAARLPV 590
PHA03378 PHA03378
EBNA-3B; Provisional
 349-589 2.94e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 41.21  E-value: 2.94e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 349 PPEAFYVERPPfPSVSSPHIFWAPSSHGFFWAPQSGPwvslGAVPPTQQASTLAHlgstlaPPASLASTLEPPASTP--- 425
Cdd:PHA03378 706 PPAAPPGRAQR-PAAATGRARPPAAAPGRARPPAAAP----GRARPPAAAPGRAR------PPAAAPGRARPPAAAPgap 774

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 426 APLASTLAPPA------STPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQ 499
Cdd:PHA03378 775 TPQPPPQAPPApqqrprGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKKPAALERQAAAGP 854

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 500 GPGPQLRGVLGQVVAARLFPDSLEdtpphfEGPPPPKAGSPKVQATQPQTKVtpPPSESQCRAKAESLKAKALPPAAGSv 579
Cdd:PHA03378 855 TPSPGSGTSDKIVQAPVFYPPVLQ------PIQVMRQLGSVRAAAASTVTQA--PTEYTGERRGVGPMHPTDIPPSKRA- 925

                        250
                 ....*....|
gi 768006885 580 irKSEATPSP 589
Cdd:PHA03378 926 --KTDAYVES 933
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
385-617 3.11e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 40.99  E-value: 3.11e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 385 PWVSLGAVPPTQQASTLAhlGSTLAPPASLASTLEPPASTPAPLAStlAPPASTPAPLACTPAPPASTLASPAVPQGLPI 464
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVA--GAVPAPGARAAAAVGASAVPAVTAVT--GAAGAALAPKAAAAAAATRAEAPPAAPAPPAT 435

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 465 PDP--SSCAQPKSLGPKSRRSRAPRPEAAEQVPAAGQGPGPQLRGVLGQVVAARLFPDSLEDTPPHFEGPPPPKAGSPkv 542
Cdd:PRK07003 436 ADRgdDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAP-- 513

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 543 qATQPQTKVTPPPSESQCRAKAESLKAKALPPAAG------SVIR------KSEATPSPGACLQPEVPLSPAEQATtvkA 610
Cdd:PRK07003 514 -AAASREDAPAAAAPPAPEARPPTPAAAAPAARAGgaaaalDVLRnagmrvSSDRGARAAAAAKPAAAPAAAPKPA---A 589


                 ....*..
gi 768006885 611 SPPAFQV 617
Cdd:PRK07003 590 PRVAVQV 596
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 407-504 4.26e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 40.56  E-value: 4.26e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 407 TLAPPASLASTLEPPASTPAPLASTLAPpASTPAPLACTPAPPASTLASPAVPQGLPI-PDPSSCAQPKSLGPKSRRSRA 485
Cdd:PRK14950 358 ALLVPVPAPQPAKPTAAAPSPVRPTPAP-STRPKAAAAANIPPKEPVRETATPPPVPPrPVAPPVPHTPESAPKLTRAAI 436

                         90
                 ....*....|....*....
gi 768006885 486 PRPEAAEqvpaaGQGPGPQ 504
Cdd:PRK14950 437 PVDEKPK-----YTPPAPP 450
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 412-506 5.36e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 40.35  E-value: 5.36e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 412 ASLASTLEPPASTPAPLASTLAPPASTPAPLAcTPAPPASTLASPAvPQGLPIPDPSSCAQPKSLGPKSRRSRAPrpeAA 491
Cdd:PRK07764 390 GAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAA-APAPAAAPQPAPA-PAPAPAPPSPAGNAPAGGAPSPPPAAAP---SA 464

                         90
                 ....*....|....*
gi 768006885 492 EQVPAAGQGPGPQLR 506
Cdd:PRK07764 465 QPAPAPAAAPEPTAA 479
PAT1 pfam09770
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ...
 267-415 6.12e-03

Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.


Pssm-ID: 401645 [Multi-domain]  Cd Length: 846  Bit Score: 40.02  E-value: 6.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  267 PTPAPAPASSQAPLRPEDDILYQWRQRRKLEQAQGSKGDRAWVPPLTPALRtltspAPVETLsslgTQPNHVPLWSSVAQ 346
Cdd:pfam09770 210 PAQQPAPAPAQPPAAPPAQQAQQQQQFPPQIQQQQQPQQQPQQPQQHPGQG-----HPVTIL----QRPQSPQPDPAQPS 280

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 768006885  347 PGPPEAFYVERPPFPSVSSPHIFWAPSSHGFFWAPQSGPWVSLGAVPPTQQA----STLAHLGSTLAPPASLA 415
Cdd:pfam09770 281 IQPQAQQFHQQPPPVPVQPTQILQNPNRLSAARVGYPQNPQPGVQPAPAHQAhrqqGSFGRQAPIITHPQQLA 353
PRK14965 PRK14965
DNA polymerase III subunits gamma and tau; Provisional
 405-498 7.11e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237871 [Multi-domain]  Cd Length: 576  Bit Score: 39.72  E-value: 7.11e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 405 GSTLAPPASLASTLE--------------PPASTPAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSC 470
Cdd:PRK14965 358 MATLAPGAPVSELLDrlealergapappsAAWGAPTPAAPAAPPPAAAPPVPPAAPARPAAARPAPAPAPPAAAAPPARS 437

                         90       100
                 ....*....|....*....|....*...
gi 768006885 471 AQPKSLGPKSRRSRAPRPEAAEQVPAAG 498
Cdd:PRK14965 438 ADPAAAASAGDRWRAFVAFVKGKKPALG 465
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 410-497 8.04e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 39.85  E-value: 8.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885 410 PPASLASTLEPPAST-PAPLASTLAPPASTPAPLACTPAPPASTLASPAVPQGLPIPDPSSCAQPKS-LGPKSRRSRAPR 487
Cdd:PRK07994 361 PAAPLPEPEVPPQSAaPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQqLQRAQGATKAKK 440

                         90
                 ....*....|
gi 768006885 488 PEAAEQVPAA 497
Cdd:PRK07994 441 SEPAAASRAR 450
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 372-466 8.85e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 39.87  E-value: 8.85e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 768006885  372 PSSHGFFWAPQSGPwvslgaVPPTQQASTLAHLGSTLAPPASLASTLEPPASTPAPLASTLAPPASTPAPLACTPAPPAS 451
Cdd:PRK12270   27 PSWREFFADYGPGS------TAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPP 100

                          90
                  ....*....|....*
gi 768006885  452 TLASPAVPQGLPIPD 466
Cdd:PRK12270  101 AAAAAAAPAAAAVED 115
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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