NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|720100562|ref|XP_010248291|]
View 

PREDICTED: BURP domain protein RD22-like [Nelumbo nucifera]

Protein Classification

BURP domain-containing protein( domain architecture ID 10504982)

BURP domain-containing protein similar to Triticum aestivum protein RAFTIN 1A/1B and Vicia faba unknown seed protein USP

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
BURP pfam03181
BURP domain; The BURP domain is found at the C-terminus of several different plant proteins. ...
 40-254 1.74e-100

BURP domain; The BURP domain is found at the C-terminus of several different plant proteins. It was named after the proteins in which it was first identified: the BNM2 clone-derived protein from Brassica napus; USPs and USP-like proteins; RD22 from Arabidopsis thaliana; and PG1beta from Lycopersicon esculentum. This domain is around 230 amino acid residues long. It possesses the following conserved features: two phenylalanine residues at its N-terminus; two cysteine residues; and four repeated cysteine-histidine motifs, arranged as: CH-X(10)-CH-X(25-27)-CH-X(25-26)-CH, where X can be any amino acid. The function of this domain is unknown.


:

Pssm-ID: 460837  Cd Length: 215  Bit Score: 291.46  E-value: 1.74e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 720100562   40 YFLEESLYSGKEMTLEVSGD---YTRATLLSRQVADSIPFSSNKLPDILDEFSIEPGSIQAEAIEETITACERSTEDNEE 116
Cdd:pfam03181   1 FFLEKDLKPGKKMPLHFPKIdpsAAAASFLPRQVADSIPFSSKKLPEILAMFSIPPGSPMAKAMKDTLRECEAPPIKGET 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 720100562  117 eaMHCTTSLESMIDWSISKLG-KNITAVGTEVDGENRHKNHFTISrsSGVKQMGEGNQVVCHGMTYPYAVYYCHVIHGTR 195
Cdd:pfam03181  81 --KFCATSLESMVDFAVSVLGtRNVRALSTEVPKGSTPLQEYTVA--EGVKKIGGDKSVACHKMPYPYAVFYCHSVPPTR 156

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 720100562  196 SYMVPMVAADGTKAKAVAVCHIDTKEFSPDHVAFKLLNVKPGSVPVCHFLPDDTIFWFP 254
Cdd:pfam03181 157 VYMVSLVGEDGTKVEAVAVCHLDTSAWNPDHVAFQVLGVKPGTVPVCHFLPEDHIVWVP 215
 
Name Accession Description Interval E-value
BURP pfam03181
BURP domain; The BURP domain is found at the C-terminus of several different plant proteins. ...
 40-254 1.74e-100

BURP domain; The BURP domain is found at the C-terminus of several different plant proteins. It was named after the proteins in which it was first identified: the BNM2 clone-derived protein from Brassica napus; USPs and USP-like proteins; RD22 from Arabidopsis thaliana; and PG1beta from Lycopersicon esculentum. This domain is around 230 amino acid residues long. It possesses the following conserved features: two phenylalanine residues at its N-terminus; two cysteine residues; and four repeated cysteine-histidine motifs, arranged as: CH-X(10)-CH-X(25-27)-CH-X(25-26)-CH, where X can be any amino acid. The function of this domain is unknown.


Pssm-ID: 460837  Cd Length: 215  Bit Score: 291.46  E-value: 1.74e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 720100562   40 YFLEESLYSGKEMTLEVSGD---YTRATLLSRQVADSIPFSSNKLPDILDEFSIEPGSIQAEAIEETITACERSTEDNEE 116
Cdd:pfam03181   1 FFLEKDLKPGKKMPLHFPKIdpsAAAASFLPRQVADSIPFSSKKLPEILAMFSIPPGSPMAKAMKDTLRECEAPPIKGET 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 720100562  117 eaMHCTTSLESMIDWSISKLG-KNITAVGTEVDGENRHKNHFTISrsSGVKQMGEGNQVVCHGMTYPYAVYYCHVIHGTR 195
Cdd:pfam03181  81 --KFCATSLESMVDFAVSVLGtRNVRALSTEVPKGSTPLQEYTVA--EGVKKIGGDKSVACHKMPYPYAVFYCHSVPPTR 156

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 720100562  196 SYMVPMVAADGTKAKAVAVCHIDTKEFSPDHVAFKLLNVKPGSVPVCHFLPDDTIFWFP 254
Cdd:pfam03181 157 VYMVSLVGEDGTKVEAVAVCHLDTSAWNPDHVAFQVLGVKPGTVPVCHFLPEDHIVWVP 215
BURP smart01045
The BURP domain is found at the C-terminus of several different plant proteins; It was named ...
 40-253 2.83e-65

The BURP domain is found at the C-terminus of several different plant proteins; It was named after the proteins in which it was first identified: the BNM2 clone-derived protein from Brassica napus; USPs and USP-like proteins; RD22 from Arabidopsis thaliana; and PG1beta from Lycopersicon esculentum. This domain is around 230 amino acid residues long. It possesses the following conserved features: two phenylalanine residues at its N-terminus; two cysteine residues; and four repeated cysteine-histidine motifs, arranged as: CH-X(10)-CH-X(25-27)-CH-X(25-26)-CH, where X can be any amino acid. The function of this domain is unknown.


Pssm-ID: 214992  Cd Length: 222  Bit Score: 202.45  E-value: 2.83e-65
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 720100562    40 YFLEESLYSGKEMTLEVSGD--YTRATLLSRQVADSIPFSSNKLPDILDEFSIEPGSIQAEAIEETITACERSTEDNEEE 117
Cdd:smart01045   3 FFRENDLKEGTLMLMPFIKDdlMPKRPFLPRQIADLLPFSSSKIDEILRVFSATKNSPMAGIIKETVGECEAPAIEGETK 82

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 720100562   118 amHCTTSLESMIDWSISKLGK-NITAVGTE--VDGENRHKNHFTISrSSGVKQMGEGNQVVCHGMTYPYAVYYCHVIHGT 194
Cdd:smart01045  83 --RCVTSLESMIDFATSVLGRyVVKVRTTEvvVGSKNKALHNYTVV-IAKVKGLNGTKSVSCHQSLYPYAVYYCHSVPGV 159

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 720100562   195 RSYMVPMVAADGTKAKAV--AVCHIDTKEFSPDHVAFKLLNVKPGSVPVCHFLPDDTIFWF 253
Cdd:smart01045 160 RVYEVDLLDPKGMRKINVgpAVCHMDTSAWDANHGAFKVLKSEPGQIPVCHFIPENDMVWV 220
 
Name Accession Description Interval E-value
BURP pfam03181
BURP domain; The BURP domain is found at the C-terminus of several different plant proteins. ...
 40-254 1.74e-100

BURP domain; The BURP domain is found at the C-terminus of several different plant proteins. It was named after the proteins in which it was first identified: the BNM2 clone-derived protein from Brassica napus; USPs and USP-like proteins; RD22 from Arabidopsis thaliana; and PG1beta from Lycopersicon esculentum. This domain is around 230 amino acid residues long. It possesses the following conserved features: two phenylalanine residues at its N-terminus; two cysteine residues; and four repeated cysteine-histidine motifs, arranged as: CH-X(10)-CH-X(25-27)-CH-X(25-26)-CH, where X can be any amino acid. The function of this domain is unknown.


Pssm-ID: 460837  Cd Length: 215  Bit Score: 291.46  E-value: 1.74e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 720100562   40 YFLEESLYSGKEMTLEVSGD---YTRATLLSRQVADSIPFSSNKLPDILDEFSIEPGSIQAEAIEETITACERSTEDNEE 116
Cdd:pfam03181   1 FFLEKDLKPGKKMPLHFPKIdpsAAAASFLPRQVADSIPFSSKKLPEILAMFSIPPGSPMAKAMKDTLRECEAPPIKGET 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 720100562  117 eaMHCTTSLESMIDWSISKLG-KNITAVGTEVDGENRHKNHFTISrsSGVKQMGEGNQVVCHGMTYPYAVYYCHVIHGTR 195
Cdd:pfam03181  81 --KFCATSLESMVDFAVSVLGtRNVRALSTEVPKGSTPLQEYTVA--EGVKKIGGDKSVACHKMPYPYAVFYCHSVPPTR 156

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 720100562  196 SYMVPMVAADGTKAKAVAVCHIDTKEFSPDHVAFKLLNVKPGSVPVCHFLPDDTIFWFP 254
Cdd:pfam03181 157 VYMVSLVGEDGTKVEAVAVCHLDTSAWNPDHVAFQVLGVKPGTVPVCHFLPEDHIVWVP 215
BURP smart01045
The BURP domain is found at the C-terminus of several different plant proteins; It was named ...
 40-253 2.83e-65

The BURP domain is found at the C-terminus of several different plant proteins; It was named after the proteins in which it was first identified: the BNM2 clone-derived protein from Brassica napus; USPs and USP-like proteins; RD22 from Arabidopsis thaliana; and PG1beta from Lycopersicon esculentum. This domain is around 230 amino acid residues long. It possesses the following conserved features: two phenylalanine residues at its N-terminus; two cysteine residues; and four repeated cysteine-histidine motifs, arranged as: CH-X(10)-CH-X(25-27)-CH-X(25-26)-CH, where X can be any amino acid. The function of this domain is unknown.


Pssm-ID: 214992  Cd Length: 222  Bit Score: 202.45  E-value: 2.83e-65
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 720100562    40 YFLEESLYSGKEMTLEVSGD--YTRATLLSRQVADSIPFSSNKLPDILDEFSIEPGSIQAEAIEETITACERSTEDNEEE 117
Cdd:smart01045   3 FFRENDLKEGTLMLMPFIKDdlMPKRPFLPRQIADLLPFSSSKIDEILRVFSATKNSPMAGIIKETVGECEAPAIEGETK 82

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 720100562   118 amHCTTSLESMIDWSISKLGK-NITAVGTE--VDGENRHKNHFTISrSSGVKQMGEGNQVVCHGMTYPYAVYYCHVIHGT 194
Cdd:smart01045  83 --RCVTSLESMIDFATSVLGRyVVKVRTTEvvVGSKNKALHNYTVV-IAKVKGLNGTKSVSCHQSLYPYAVYYCHSVPGV 159

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 720100562   195 RSYMVPMVAADGTKAKAV--AVCHIDTKEFSPDHVAFKLLNVKPGSVPVCHFLPDDTIFWF 253
Cdd:smart01045 160 RVYEVDLLDPKGMRKINVgpAVCHMDTSAWDANHGAFKVLKSEPGQIPVCHFIPENDMVWV 220
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH