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Conserved domains on  [gi|688543139|ref|XP_009297753|]
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granulin a isoform X3 [Danio rerio]

Protein Classification

Granulin domain-containing protein( domain architecture ID 10449572)

Granulin domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Granulin pfam00396
Granulin;
566-607 5.49e-13

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 5.49e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   566 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 607
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
302-343 5.49e-13

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 5.49e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   302 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 343
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
478-518 5.99e-13

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 5.99e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 688543139   478 TCCKDKDGEWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 518
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
654-694 9.86e-13

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.40  E-value: 9.86e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 688543139   654 TCCKDKDGDWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 694
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
390-431 1.10e-12

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.01  E-value: 1.10e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   390 TCCKTKEGDWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 431
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
183-224 4.31e-12

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 61.47  E-value: 4.31e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   183 TCCQADDGQWGCCPMPKAVCCDDKIHCCPEDTVCDVKALKCV 224
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
907-948 1.27e-11

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.93  E-value: 1.27e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   907 TCCLLSKDETGCCPFPEAVCCPDQKHCCPEGYRCDLRRRSCV 948
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
734-774 1.34e-11

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.93  E-value: 1.34e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 688543139   734 TCCKNIAGEWGCCPFSQAVCCSDGFHCCPQGTTCDFVTLTC 774
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
990-1030 1.95e-10

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 56.85  E-value: 1.95e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   990 TCCLTSQTTWGCCPSPKAVCCDDMQHCCPAGYKCGP-GGTCI 1030
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLdGGTCL 42
Granulin pfam00396
Granulin;
825-867 6.00e-10

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 55.31  E-value: 6.00e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 688543139   825 TCCLIaKTNKWGCCPLPNAVCCTDGEHCCPAHYKCNLSSVSCI 867
Cdd:pfam00396    1 TCCKL-PSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
30-70 4.37e-09

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 53.00  E-value: 4.37e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 688543139    30 SCCQDPTGGFSCCPFHHGECCEDHLHCCPEGMLCSVKDLTC 70
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
121-160 2.31e-07

Granulin;


:

Pssm-ID: 459799  Cd Length: 42  Bit Score: 47.99  E-value: 2.31e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 688543139   121 CLLMSTSYGCCPVAQGLACSDGKHCCPNDHECSTDSSLCV 160
Cdd:pfam00396    3 CKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
 
Name Accession Description Interval E-value
Granulin pfam00396
Granulin;
566-607 5.49e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 5.49e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   566 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 607
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
302-343 5.49e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 5.49e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   302 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 343
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
478-518 5.99e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 5.99e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 688543139   478 TCCKDKDGEWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 518
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
654-694 9.86e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.40  E-value: 9.86e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 688543139   654 TCCKDKDGDWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 694
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
390-431 1.10e-12

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.01  E-value: 1.10e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   390 TCCKTKEGDWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 431
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
183-224 4.31e-12

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 61.47  E-value: 4.31e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   183 TCCQADDGQWGCCPMPKAVCCDDKIHCCPEDTVCDVKALKCV 224
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
907-948 1.27e-11

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.93  E-value: 1.27e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   907 TCCLLSKDETGCCPFPEAVCCPDQKHCCPEGYRCDLRRRSCV 948
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
734-774 1.34e-11

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.93  E-value: 1.34e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 688543139   734 TCCKNIAGEWGCCPFSQAVCCSDGFHCCPQGTTCDFVTLTC 774
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
GRAN smart00277
Granulin;
473-518 3.40e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 59.26  E-value: 3.40e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 688543139    473 CPDGSTCCKDKDGEWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 518
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
649-694 3.51e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 59.26  E-value: 3.51e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 688543139    649 CPDGSTCCKDKDGDWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 694
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
297-342 4.65e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.88  E-value: 4.65e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 688543139    297 CPDGSTCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSC 342
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
561-606 4.65e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.88  E-value: 4.65e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 688543139    561 CPDGSTCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSC 606
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
385-430 9.23e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.11  E-value: 9.23e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 688543139    385 CADGTTCCKTKEGDWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSC 430
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
176-223 1.39e-10

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 57.34  E-value: 1.39e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*...
gi 688543139    176 SECPADTTCCQADDGQWGCCPMPKAVCCDDKIHCCPEDTVCDVKALKC 223
Cdd:smart00277    4 TSCPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
Granulin pfam00396
Granulin;
990-1030 1.95e-10

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 56.85  E-value: 1.95e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   990 TCCLTSQTTWGCCPSPKAVCCDDMQHCCPAGYKCGP-GGTCI 1030
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLdGGTCL 42
GRAN smart00277
Granulin;
729-774 2.65e-10

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 56.57  E-value: 2.65e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 688543139    729 CPESSTCCKNIAGEWGCCPFSQAVCCSDGFHCCPQGTTCDFVTLTC 774
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
982-1029 5.53e-10

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 55.80  E-value: 5.53e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*....
gi 688543139    982 GFSCHDGETCCLTSQTTWGCCPSPKAVCCDDMQHCCPAGYKCGP-GGTC 1029
Cdd:smart00277    3 ETSCPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTdGGTC 51
Granulin pfam00396
Granulin;
825-867 6.00e-10

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 55.31  E-value: 6.00e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 688543139   825 TCCLIaKTNKWGCCPLPNAVCCTDGEHCCPAHYKCNLSSVSCI 867
Cdd:pfam00396    1 TCCKL-PSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
GRAN smart00277
Granulin;
897-947 1.56e-09

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 54.64  E-value: 1.56e-09
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|.
gi 688543139    897 DEQSSCSADSTCCLLSKDETGCCPFPEAVCCPDQKHCCPEGYRCDLRRRSC 947
Cdd:smart00277    1 DSETSCPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
Granulin pfam00396
Granulin;
30-70 4.37e-09

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 53.00  E-value: 4.37e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 688543139    30 SCCQDPTGGFSCCPFHHGECCEDHLHCCPEGMLCSVKDLTC 70
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
GRAN smart00277
Granulin;
815-866 9.08e-09

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 52.33  E-value: 9.08e-09
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 688543139    815 DAQTSCPDYTTCCLIAkTNKWGCCPLPNAVCCTDGEHCCPAHYKCNLSSVSC 866
Cdd:smart00277    1 DSETSCPDGTTCCLLP-EGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
Granulin pfam00396
Granulin;
121-160 2.31e-07

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 47.99  E-value: 2.31e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 688543139   121 CLLMSTSYGCCPVAQGLACSDGKHCCPNDHECSTDSSLCV 160
Cdd:pfam00396    3 CKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
GRAN smart00277
Granulin;
25-70 1.97e-06

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 45.78  E-value: 1.97e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 688543139     25 CEAGQSCCQDPTGGFSCCPFHHGECCEDHLHCCPEGMLCSVKDLTC 70
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
108-159 1.57e-05

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 43.09  E-value: 1.57e-05
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 688543139    108 TCPDGSSCpaefsCLLMSTSYGCCPVAQGLACSDGKHCCPNDHECSTDSSLC 159
Cdd:smart00277    5 SCPDGTTC-----CLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
 
Name Accession Description Interval E-value
Granulin pfam00396
Granulin;
566-607 5.49e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 5.49e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   566 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 607
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
302-343 5.49e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 5.49e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   302 TCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 343
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
478-518 5.99e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.79  E-value: 5.99e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 688543139   478 TCCKDKDGEWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 518
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
654-694 9.86e-13

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.40  E-value: 9.86e-13
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 688543139   654 TCCKDKDGDWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 694
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
Granulin pfam00396
Granulin;
390-431 1.10e-12

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 63.01  E-value: 1.10e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   390 TCCKTKEGDWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSCE 431
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
183-224 4.31e-12

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 61.47  E-value: 4.31e-12
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   183 TCCQADDGQWGCCPMPKAVCCDDKIHCCPEDTVCDVKALKCV 224
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
907-948 1.27e-11

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.93  E-value: 1.27e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   907 TCCLLSKDETGCCPFPEAVCCPDQKHCCPEGYRCDLRRRSCV 948
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
Granulin pfam00396
Granulin;
734-774 1.34e-11

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 59.93  E-value: 1.34e-11
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 688543139   734 TCCKNIAGEWGCCPFSQAVCCSDGFHCCPQGTTCDFVTLTC 774
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
GRAN smart00277
Granulin;
473-518 3.40e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 59.26  E-value: 3.40e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 688543139    473 CPDGSTCCKDKDGEWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 518
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
649-694 3.51e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 59.26  E-value: 3.51e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 688543139    649 CPDGSTCCKDKDGDWGCCPLPEAVCCEDFIHCCPHGKKCNVAAGSC 694
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
297-342 4.65e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.88  E-value: 4.65e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 688543139    297 CPDGSTCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSC 342
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
561-606 4.65e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.88  E-value: 4.65e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 688543139    561 CPDGSTCCKTKDGGWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSC 606
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
385-430 9.23e-11

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 58.11  E-value: 9.23e-11
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 688543139    385 CADGTTCCKTKEGDWACCPLPEAVCCEDFIHCCPHGKKCDVAAGSC 430
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
176-223 1.39e-10

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 57.34  E-value: 1.39e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*...
gi 688543139    176 SECPADTTCCQADDGQWGCCPMPKAVCCDDKIHCCPEDTVCDVKALKC 223
Cdd:smart00277    4 TSCPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
Granulin pfam00396
Granulin;
990-1030 1.95e-10

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 56.85  E-value: 1.95e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 688543139   990 TCCLTSQTTWGCCPSPKAVCCDDMQHCCPAGYKCGP-GGTCI 1030
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLdGGTCL 42
GRAN smart00277
Granulin;
729-774 2.65e-10

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 56.57  E-value: 2.65e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 688543139    729 CPESSTCCKNIAGEWGCCPFSQAVCCSDGFHCCPQGTTCDFVTLTC 774
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
982-1029 5.53e-10

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 55.80  E-value: 5.53e-10
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*....
gi 688543139    982 GFSCHDGETCCLTSQTTWGCCPSPKAVCCDDMQHCCPAGYKCGP-GGTC 1029
Cdd:smart00277    3 ETSCPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTdGGTC 51
Granulin pfam00396
Granulin;
825-867 6.00e-10

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 55.31  E-value: 6.00e-10
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 688543139   825 TCCLIaKTNKWGCCPLPNAVCCTDGEHCCPAHYKCNLSSVSCI 867
Cdd:pfam00396    1 TCCKL-PSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
GRAN smart00277
Granulin;
897-947 1.56e-09

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 54.64  E-value: 1.56e-09
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|.
gi 688543139    897 DEQSSCSADSTCCLLSKDETGCCPFPEAVCCPDQKHCCPEGYRCDLRRRSC 947
Cdd:smart00277    1 DSETSCPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
Granulin pfam00396
Granulin;
30-70 4.37e-09

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 53.00  E-value: 4.37e-09
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 688543139    30 SCCQDPTGGFSCCPFHHGECCEDHLHCCPEGMLCSVKDLTC 70
Cdd:pfam00396    1 TCCKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTC 41
GRAN smart00277
Granulin;
815-866 9.08e-09

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 52.33  E-value: 9.08e-09
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 688543139    815 DAQTSCPDYTTCCLIAkTNKWGCCPLPNAVCCTDGEHCCPAHYKCNLSSVSC 866
Cdd:smart00277    1 DSETSCPDGTTCCLLP-EGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
Granulin pfam00396
Granulin;
121-160 2.31e-07

Granulin;


Pssm-ID: 459799  Cd Length: 42  Bit Score: 47.99  E-value: 2.31e-07
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 688543139   121 CLLMSTSYGCCPVAQGLACSDGKHCCPNDHECSTDSSLCV 160
Cdd:pfam00396    3 CKLPSGSWGCCPLPQAVCCSDGKHCCPEGYTCDLDGGTCL 42
GRAN smart00277
Granulin;
25-70 1.97e-06

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 45.78  E-value: 1.97e-06
                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*.
gi 688543139     25 CEAGQSCCQDPTGGFSCCPFHHGECCEDHLHCCPEGMLCSVKDLTC 70
Cdd:smart00277    6 CPDGTTCCLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
GRAN smart00277
Granulin;
108-159 1.57e-05

Granulin;


Pssm-ID: 197621  Cd Length: 51  Bit Score: 43.09  E-value: 1.57e-05
                            10        20        30        40        50
                    ....*....|....*....|....*....|....*....|....*....|..
gi 688543139    108 TCPDGSSCpaefsCLLMSTSYGCCPVAQGLACSDGKHCCPNDHECSTDSSLC 159
Cdd:smart00277    5 SCPDGTTC-----CLLPEGSWGCCPLPNAVCCEDGIHCCPHGYHCDTDGGTC 51
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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