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Conserved domains on  [gi|1958664821|ref|XP_008767086|]
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THAP domain-containing protein 7 isoform X1 [Rattus norvegicus]

Protein Classification

THAP domain-containing protein( domain architecture ID 10659521)

THAP domain-containing protein may act as a DNA-binding transcription regulator

CATH:  3.30.40.180|2.40.128.20
Gene Ontology:  GO:0003700|GO:0046872|GO:0043565
PubMed:  20144952|12575992
SCOP:  4002822

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
THAP smart00980
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion; It ...
 4-127 4.34e-15

The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion; It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes.


:

Pssm-ID: 214951  Cd Length: 80  Bit Score: 69.39  E-value: 4.34e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958664821    4 HCSAAGCctrDTRETRNRGISFHRsarvrsgtrgltcagawccrtlgragdsaflrskLPKKDNPRRGLWLANCQRLDPS 83
Cdd:smart00980   1 KCCVPGC---GNRSKKNPGLSFFR----------------------------------FPKEDPELRKKWLENLGLPDDP 43

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1958664821   84 GQGLWDptseYIYFCSKHFEENCFELVGisgyHRLKEGAVPTIF 127
Cdd:smart00980  44 NRKPKK----RSRICSRHFEPDDFDNSG----RRLKPGAVPTLF 79
 
Name Accession Description Interval E-value
THAP smart00980
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion; It ...
 4-127 4.34e-15

The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion; It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes.


Pssm-ID: 214951  Cd Length: 80  Bit Score: 69.39  E-value: 4.34e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958664821    4 HCSAAGCctrDTRETRNRGISFHRsarvrsgtrgltcagawccrtlgragdsaflrskLPKKDNPRRGLWLANCQRLDPS 83
Cdd:smart00980   1 KCCVPGC---GNRSKKNPGLSFFR----------------------------------FPKEDPELRKKWLENLGLPDDP 43

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1958664821   84 GQGLWDptseYIYFCSKHFEENCFELVGisgyHRLKEGAVPTIF 127
Cdd:smart00980  44 NRKPKK----RSRICSRHFEPDDFDNSG----RRLKPGAVPTLF 79
THAP pfam05485
THAP domain; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a ...
 5-127 5.98e-13

THAP domain; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes.


Pssm-ID: 461662  Cd Length: 76  Bit Score: 63.32  E-value: 5.98e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958664821   5 CSAAGCCTRDTRetrNRGISFHRsarvrsgtrgltcagawccrtlgragdsaflrskLPKkDNPRRGLWLANCQRldpsg 84
Cdd:pfam05485   1 CSVPGCTNRKKK---NPRTSFHK----------------------------------FPK-DPERRKKWLNACKR----- 37

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1958664821  85 QGLWDPTSEYIyfCSKHFEENCFElvGISGYHRLKEGAVPTIF 127
Cdd:pfam05485  38 KDLPPPSNSYV--CSLHFEENDFE--KSGGKRKLKPGAIPTLF 76
 
Name Accession Description Interval E-value
THAP smart00980
The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion; It ...
 4-127 4.34e-15

The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion; It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes.


Pssm-ID: 214951  Cd Length: 80  Bit Score: 69.39  E-value: 4.34e-15
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958664821    4 HCSAAGCctrDTRETRNRGISFHRsarvrsgtrgltcagawccrtlgragdsaflrskLPKKDNPRRGLWLANCQRLDPS 83
Cdd:smart00980   1 KCCVPGC---GNRSKKNPGLSFFR----------------------------------FPKEDPELRKKWLENLGLPDDP 43

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1958664821   84 GQGLWDptseYIYFCSKHFEENCFELVGisgyHRLKEGAVPTIF 127
Cdd:smart00980  44 NRKPKK----RSRICSRHFEPDDFDNSG----RRLKPGAVPTLF 79
THAP pfam05485
THAP domain; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a ...
 5-127 5.98e-13

THAP domain; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes.


Pssm-ID: 461662  Cd Length: 76  Bit Score: 63.32  E-value: 5.98e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958664821   5 CSAAGCCTRDTRetrNRGISFHRsarvrsgtrgltcagawccrtlgragdsaflrskLPKkDNPRRGLWLANCQRldpsg 84
Cdd:pfam05485   1 CSVPGCTNRKKK---NPRTSFHK----------------------------------FPK-DPERRKKWLNACKR----- 37

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1958664821  85 QGLWDPTSEYIyfCSKHFEENCFElvGISGYHRLKEGAVPTIF 127
Cdd:pfam05485  38 KDLPPPSNSYV--CSLHFEENDFE--KSGGKRKLKPGAIPTLF 76
DM3 smart00692
Zinc finger domain in CG10631, C. elegans LIN-15B and human P52rIPK;
61-127 1.43e-11

Zinc finger domain in CG10631, C. elegans LIN-15B and human P52rIPK;


Pssm-ID: 128933  Cd Length: 59  Bit Score: 58.86  E-value: 1.43e-11
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958664821   61 KLPKkDNPRRGLWLANCqRLDPSGQGLWdptseYIYFCSKHFEENCFelvgiSGYHRLKEGAVPTIF 127
Cdd:smart00692   3 RFPK-DPELLKKWEHNL-RLSPDEKKLK-----NSRICSRHFEPECF-----GKRRRLKPGAVPTLE 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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