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Conserved domains on  [gi|586757870|ref|XP_006853650|]
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uncharacterized protein LOC18443398 isoform X1 [Amborella trichopoda]

Protein Classification

DUF1677 domain-containing protein( domain architecture ID 10546055)

DUF1677 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1677 pfam07911
Protein of unknown function (DUF1677); The sequences found in this family are all derived from ...
 84-184 8.20e-48

Protein of unknown function (DUF1677); The sequences found in this family are all derived from hypothetical plant proteins of unknown function. The region features a number of highly conserved cysteine residues.


:

Pssm-ID: 462314  Cd Length: 89  Bit Score: 152.33  E-value: 8.20e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 586757870   84 VENAVCECCGLSEEYTTDYMKQVRERFCGKWVCGLCAEAVKEELQRLGevsptkkeevsfTKEKVEEALSVHMAVCVRFS 163
Cdd:pfam07911   1 VESAKCECCGLTEECTPEYIARVRERFGGRWICGLCSEAVKEEVGRSK------------PGISVEEALARHMSFCRKFN 68

                          90       100
                  ....*....|....*....|.
gi 586757870  164 RIGRTNPALFLADGMREILKR 184
Cdd:pfam07911  69 SSTRPNPALDLADAMRQILRR 89
 
Name Accession Description Interval E-value
DUF1677 pfam07911
Protein of unknown function (DUF1677); The sequences found in this family are all derived from ...
 84-184 8.20e-48

Protein of unknown function (DUF1677); The sequences found in this family are all derived from hypothetical plant proteins of unknown function. The region features a number of highly conserved cysteine residues.


Pssm-ID: 462314  Cd Length: 89  Bit Score: 152.33  E-value: 8.20e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 586757870   84 VENAVCECCGLSEEYTTDYMKQVRERFCGKWVCGLCAEAVKEELQRLGevsptkkeevsfTKEKVEEALSVHMAVCVRFS 163
Cdd:pfam07911   1 VESAKCECCGLTEECTPEYIARVRERFGGRWICGLCSEAVKEEVGRSK------------PGISVEEALARHMSFCRKFN 68

                          90       100
                  ....*....|....*....|.
gi 586757870  164 RIGRTNPALFLADGMREILKR 184
Cdd:pfam07911  69 SSTRPNPALDLADAMRQILRR 89
 
Name Accession Description Interval E-value
DUF1677 pfam07911
Protein of unknown function (DUF1677); The sequences found in this family are all derived from ...
 84-184 8.20e-48

Protein of unknown function (DUF1677); The sequences found in this family are all derived from hypothetical plant proteins of unknown function. The region features a number of highly conserved cysteine residues.


Pssm-ID: 462314  Cd Length: 89  Bit Score: 152.33  E-value: 8.20e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 586757870   84 VENAVCECCGLSEEYTTDYMKQVRERFCGKWVCGLCAEAVKEELQRLGevsptkkeevsfTKEKVEEALSVHMAVCVRFS 163
Cdd:pfam07911   1 VESAKCECCGLTEECTPEYIARVRERFGGRWICGLCSEAVKEEVGRSK------------PGISVEEALARHMSFCRKFN 68

                          90       100
                  ....*....|....*....|.
gi 586757870  164 RIGRTNPALFLADGMREILKR 184
Cdd:pfam07911  69 SSTRPNPALDLADAMRQILRR 89
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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