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Conserved domains on  [gi|568909756|ref|XP_006529981|]
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secreted phosphoprotein 24 isoform X1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Cathelicidins super family cl29764
Cathelicidin; A novel protein family, showing a conserved proregion and a variable ...
67-108 6.58e-21

Cathelicidin; A novel protein family, showing a conserved proregion and a variable carboxyl-terminal antimicrobial domain. This region shows similarity to cystatins.


The actual alignment was detected with superfamily member pfam07448:

Pssm-ID: 453055  Cd Length: 64  Bit Score: 79.09  E-value: 6.58e-21
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 568909756   67 VLDEDTLVMNLEFSVQETTCLRDSG-DPSTCAFQRGYSVPAPA 108
Cdd:pfam07448   1 VLDEDSLSMDLEFSIRETTCRRDSGeDPSTCDFQRGYYVPAAV 43
CY super family cl09238
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
32-100 2.62e-03

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


The actual alignment was detected with superfamily member pfam00031:

Pssm-ID: 447698  Cd Length: 92  Bit Score: 34.62  E-value: 2.62e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568909756   32 SSLQEALSASVAKVNSQSLSPY--LFRATRSSLKRVNvldedtlVMN--LEFSVQETTCLRDSGDPSTCAFQR 100
Cdd:pfam00031  11 PELQEALDFALAEYNAKTDNYYfeLVEVKRAKSQVVA-------GTNyfIKVEVGETDCSKSKKLLEDCPLLD 76
 
Name Accession Description Interval E-value
Spp-24 pfam07448
Secreted phosphoprotein 24 (Spp-24) cystatin-like domain; This family represents a conserved ...
67-108 6.58e-21

Secreted phosphoprotein 24 (Spp-24) cystatin-like domain; This family represents a conserved region approximately 60 residues long within secreted phosphoprotein 24 (Spp-24), which seems to be restricted to vertebrates. This is a non-collagenous protein found in bone that is related in sequence to the cystatin family of thiol protease inhibitors. This suggests that Spp-24 could function to modulate the thiol protease activities known to be involved in bone turnover. It is also possible that the intact form of Spp-24 found in bone could be a precursor to a biologically active peptide that coordinates an aspect of bone turnover.


Pssm-ID: 429466  Cd Length: 64  Bit Score: 79.09  E-value: 6.58e-21
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 568909756   67 VLDEDTLVMNLEFSVQETTCLRDSG-DPSTCAFQRGYSVPAPA 108
Cdd:pfam07448   1 VLDEDSLSMDLEFSIRETTCRRDSGeDPSTCDFQRGYYVPAAV 43
Cystatin pfam00031
Cystatin domain; Very diverse family. Attempts to define separate sub-families failed. ...
32-100 2.62e-03

Cystatin domain; Very diverse family. Attempts to define separate sub-families failed. Typically, either the N-terminal or C-terminal end is very divergent. But splitting into two domains would make very short families. pfam00666 is related to this family but has not been included.


Pssm-ID: 425431  Cd Length: 92  Bit Score: 34.62  E-value: 2.62e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568909756   32 SSLQEALSASVAKVNSQSLSPY--LFRATRSSLKRVNvldedtlVMN--LEFSVQETTCLRDSGDPSTCAFQR 100
Cdd:pfam00031  11 PELQEALDFALAEYNAKTDNYYfeLVEVKRAKSQVVA-------GTNyfIKVEVGETDCSKSKKLLEDCPLLD 76
CY smart00043
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
34-98 4.63e-03

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


Pssm-ID: 214484  Cd Length: 107  Bit Score: 33.94  E-value: 4.63e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568909756    34 LQEALSASVAKVNSQSLSPYLFRAtrssLKRVNVLDEDTLVMN--LEFSVQETTCLRDSGDPSTCAF 98
Cdd:smart00043  16 VQEAADFAVAEYNKKSNDKYELRV----IKVVSAKSQVVAGTNyyLKVEVGETNCKKLSVDLENCPF 78
 
Name Accession Description Interval E-value
Spp-24 pfam07448
Secreted phosphoprotein 24 (Spp-24) cystatin-like domain; This family represents a conserved ...
67-108 6.58e-21

Secreted phosphoprotein 24 (Spp-24) cystatin-like domain; This family represents a conserved region approximately 60 residues long within secreted phosphoprotein 24 (Spp-24), which seems to be restricted to vertebrates. This is a non-collagenous protein found in bone that is related in sequence to the cystatin family of thiol protease inhibitors. This suggests that Spp-24 could function to modulate the thiol protease activities known to be involved in bone turnover. It is also possible that the intact form of Spp-24 found in bone could be a precursor to a biologically active peptide that coordinates an aspect of bone turnover.


Pssm-ID: 429466  Cd Length: 64  Bit Score: 79.09  E-value: 6.58e-21
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 568909756   67 VLDEDTLVMNLEFSVQETTCLRDSG-DPSTCAFQRGYSVPAPA 108
Cdd:pfam07448   1 VLDEDSLSMDLEFSIRETTCRRDSGeDPSTCDFQRGYYVPAAV 43
Cystatin pfam00031
Cystatin domain; Very diverse family. Attempts to define separate sub-families failed. ...
32-100 2.62e-03

Cystatin domain; Very diverse family. Attempts to define separate sub-families failed. Typically, either the N-terminal or C-terminal end is very divergent. But splitting into two domains would make very short families. pfam00666 is related to this family but has not been included.


Pssm-ID: 425431  Cd Length: 92  Bit Score: 34.62  E-value: 2.62e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568909756   32 SSLQEALSASVAKVNSQSLSPY--LFRATRSSLKRVNvldedtlVMN--LEFSVQETTCLRDSGDPSTCAFQR 100
Cdd:pfam00031  11 PELQEALDFALAEYNAKTDNYYfeLVEVKRAKSQVVA-------GTNyfIKVEVGETDCSKSKKLLEDCPLLD 76
CY smart00043
Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly ...
34-98 4.63e-03

Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.


Pssm-ID: 214484  Cd Length: 107  Bit Score: 33.94  E-value: 4.63e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568909756    34 LQEALSASVAKVNSQSLSPYLFRAtrssLKRVNVLDEDTLVMN--LEFSVQETTCLRDSGDPSTCAF 98
Cdd:smart00043  16 VQEAADFAVAEYNKKSNDKYELRV----IKVVSAKSQVVAGTNyyLKVEVGETNCKKLSVDLENCPF 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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