jmjC domain-containing protein 8 isoform X1 [Rattus norvegicus]
cupin domain-containing protein( domain architecture ID 1562428)
cupin domain-containing protein, part of a functionally diverse superfamily with the active site generally located at the center of a conserved domain forming a beta-barrel fold
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
Cupin_8 super family | cl46322 | Cupin-like domain; This cupin like domain shares similarity to the JmjC domain. |
81-274 | 5.17e-14 | ||||
Cupin-like domain; This cupin like domain shares similarity to the JmjC domain. The actual alignment was detected with superfamily member pfam13621: Pssm-ID: 463936 Cd Length: 251 Bit Score: 70.09 E-value: 5.17e-14
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Name | Accession | Description | Interval | E-value | ||||
Cupin_8 | pfam13621 | Cupin-like domain; This cupin like domain shares similarity to the JmjC domain. |
81-274 | 5.17e-14 | ||||
Cupin-like domain; This cupin like domain shares similarity to the JmjC domain. Pssm-ID: 463936 Cd Length: 251 Bit Score: 70.09 E-value: 5.17e-14
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RoxA | COG2850 | Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain [Translation, ribosomal ... |
78-286 | 5.62e-03 | ||||
Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain [Translation, ribosomal structure and biogenesis]; Pssm-ID: 442098 Cd Length: 274 Bit Score: 37.49 E-value: 5.62e-03
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Name | Accession | Description | Interval | E-value | ||||
Cupin_8 | pfam13621 | Cupin-like domain; This cupin like domain shares similarity to the JmjC domain. |
81-274 | 5.17e-14 | ||||
Cupin-like domain; This cupin like domain shares similarity to the JmjC domain. Pssm-ID: 463936 Cd Length: 251 Bit Score: 70.09 E-value: 5.17e-14
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JmjC_2 | pfam08007 | JmjC domain; This entry includes proteins with a JmjC domain that belong to the cupin ... |
196-287 | 6.43e-04 | ||||
JmjC domain; This entry includes proteins with a JmjC domain that belong to the cupin superfamily, including Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66, Ribosomal oxygenase 1/2, and 50S ribosomal protein L16 3-hydroxylase from Escherichia coli. Proteins are bifunctional, acting as histone lysine demethylases and ribosomal histidine hydroxylases. Pssm-ID: 462340 Cd Length: 116 Bit Score: 38.77 E-value: 6.43e-04
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JmjC | pfam02373 | JmjC domain, hydroxylase; The JmjC domain belongs to the Cupin superfamily. JmjC-domain ... |
199-287 | 1.28e-03 | ||||
JmjC domain, hydroxylase; The JmjC domain belongs to the Cupin superfamily. JmjC-domain proteins may be protein hydroxylases that catalyze a novel histone modification. This is confirmed to be a hydroxylase: the human JmjC protein named Tyw5p unexpectedly acts in the biosynthesis of a hypermodified nucleoside, hydroxy-wybutosine, in tRNA-Phe by catalysing hydroxylation. Pssm-ID: 396791 Cd Length: 114 Bit Score: 37.66 E-value: 1.28e-03
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RoxA | COG2850 | Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain [Translation, ribosomal ... |
78-286 | 5.62e-03 | ||||
Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain [Translation, ribosomal structure and biogenesis]; Pssm-ID: 442098 Cd Length: 274 Bit Score: 37.49 E-value: 5.62e-03
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Blast search parameters | ||||
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