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Conserved domains on  [gi|564352910|ref|XP_006238965|]
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MAP7 domain-containing protein 1 isoform X4 [Rattus norvegicus]

Protein Classification

MAP7 domain-containing protein( domain architecture ID 12064852)

MAP7 domain-containing protein such as MAP7D1 (microtubule-associated protein 7 domain containing 1) identified as a novel substrate of doublecortin-like kinase 1 (DCLK1)

Gene Ontology:  GO:0005737

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MAP7 pfam05672
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is ...
 560-698 7.84e-22

MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is presumably controlled by tissue-specific microtubule-associated proteins (MAPs). The 115-kDa epithelial MAP (E-MAP-115/MAP7) has been identified as a microtubule-stabilising protein predominantly expressed in cell lines of epithelial origin. The binding of this microtubule associated protein is nucleotide independent.


:

Pssm-ID: 461709 [Multi-domain]  Cd Length: 153  Bit Score: 92.80  E-value: 7.84e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  560 KPMAGTTDREEATRLLAEKRRQAREQREREEQERKLQAERDKRMREEQ--------------LAREAEARAEREAEARRR 625
Cdd:pfam05672   1 KPSAGTTDAEEAARILAEKRRQAREQREREEQERLEKEEEERLRKEELrrraeeerarreeeARRLEEERRREEEERQRK 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564352910  626 EEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQKEEQERQERRKRLEEIMKRTRKSEAAE 698
Cdd:pfam05672  81 AEEEAEEREQREQEEQERLQKQKEEAEAKAREEAERQRQEREKIMQQEEQERLERKKRIEEIMKRTRKSDQAE 153
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 280-572 5.75e-09

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 60.34  E-value: 5.75e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  280 VTLPRNGRDQGR---GSGPGRRPTRARAGASLA--------------PGPHPDRTHPSAAVPVCPRSASAS----PLTPC 338
Cdd:PHA03247 2661 VSRPRRARRLGRaaqASSPPQRPRRRAARPTVGsltsladpppppptPEPAPHALVSATPLPPGPAAARQAspalPAAPA 2740

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  339 SAPRSAHRCTPSGERPERRKPGAGGSPALVRRRLEATPVQKKEKKDKERENEKEKSALARERNlkkRQSLPASIRPRIST 418
Cdd:PHA03247 2741 PPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWD---PADPPAAVLAPAAA 2817

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  419 gaeLSTKSKARPTSPSTTWHRPASPCPSPGPghtlpPKPPSPRGTTASPKGRIRRKEEAKesPSPSGPEDKNHSKSRTAE 498
Cdd:PHA03247 2818 ---LPPAASPAGPLPPPTSAQPTAPPPPPGP-----PPPSLPLGGSVAPGGDVRRRPPSR--SPAAKPAAPARPPVRRLA 2887

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 564352910  499 EKEPAAPASPAPSPVPSPTPAQPQKEQSSTQIPPDTAVPAVPTVPtfptaPPTAAPSVTPSKPMAGTTDREEAT 572
Cdd:PHA03247 2888 RPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPP-----PPPPPRPQPPLAPTTDPAGAGEPS 2956
PTZ00121 super family cl31754
MAEBL; Provisional
 132-223 6.55e-04

MAEBL; Provisional


The actual alignment was detected with superfamily member PTZ00121:

Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 43.59  E-value: 6.55e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  132 QDVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAK--------ALREKQLQERRRRLEEQRLKAEQRRAALEERQR 203
Cdd:PTZ00121 1555 EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARieevmklyEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKK 1634

                          90       100
                  ....*....|....*....|
gi 564352910  204 QKLEKNKERYEAAIQRSVKK 223
Cdd:PTZ00121 1635 VEQLKKKEAEEKKKAEELKK 1654
PRK12323 super family cl46901
DNA polymerase III subunit gamma/tau;
9-130 4.58e-03

DNA polymerase III subunit gamma/tau;


The actual alignment was detected with superfamily member PRK14971:

Pssm-ID: 481241 [Multi-domain]  Cd Length: 614  Bit Score: 40.53  E-value: 4.58e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910   9 PGPGAPAAVLARIPQEPRPSPEGDPSPPPPPTPMSALVPDTPPDTPPAMKNASTPQQLPLEPVSPTgQVSPQPAPPPDEC 88
Cdd:PRK14971 370 SGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAV-PVNPPSTAPQAVR 448

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 564352910  89 PSSeAKSRGPTPTATGPRDAKPSQRSSQPsPTAVPASDSPSA 130
Cdd:PRK14971 449 PAQ-FKEEKKIPVSKVSSLGPSTLRPIQE-KAEQATGNIKEA 488
 
Name Accession Description Interval E-value
MAP7 pfam05672
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is ...
 560-698 7.84e-22

MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is presumably controlled by tissue-specific microtubule-associated proteins (MAPs). The 115-kDa epithelial MAP (E-MAP-115/MAP7) has been identified as a microtubule-stabilising protein predominantly expressed in cell lines of epithelial origin. The binding of this microtubule associated protein is nucleotide independent.


Pssm-ID: 461709 [Multi-domain]  Cd Length: 153  Bit Score: 92.80  E-value: 7.84e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  560 KPMAGTTDREEATRLLAEKRRQAREQREREEQERKLQAERDKRMREEQ--------------LAREAEARAEREAEARRR 625
Cdd:pfam05672   1 KPSAGTTDAEEAARILAEKRRQAREQREREEQERLEKEEEERLRKEELrrraeeerarreeeARRLEEERRREEEERQRK 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564352910  626 EEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQKEEQERQERRKRLEEIMKRTRKSEAAE 698
Cdd:pfam05672  81 AEEEAEEREQREQEEQERLQKQKEEAEAKAREEAERQRQEREKIMQQEEQERLERKKRIEEIMKRTRKSDQAE 153
PHA03247 PHA03247
large tegument protein UL36; Provisional
 280-572 5.75e-09

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 60.34  E-value: 5.75e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  280 VTLPRNGRDQGR---GSGPGRRPTRARAGASLA--------------PGPHPDRTHPSAAVPVCPRSASAS----PLTPC 338
Cdd:PHA03247 2661 VSRPRRARRLGRaaqASSPPQRPRRRAARPTVGsltsladpppppptPEPAPHALVSATPLPPGPAAARQAspalPAAPA 2740

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  339 SAPRSAHRCTPSGERPERRKPGAGGSPALVRRRLEATPVQKKEKKDKERENEKEKSALARERNlkkRQSLPASIRPRIST 418
Cdd:PHA03247 2741 PPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWD---PADPPAAVLAPAAA 2817

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  419 gaeLSTKSKARPTSPSTTWHRPASPCPSPGPghtlpPKPPSPRGTTASPKGRIRRKEEAKesPSPSGPEDKNHSKSRTAE 498
Cdd:PHA03247 2818 ---LPPAASPAGPLPPPTSAQPTAPPPPPGP-----PPPSLPLGGSVAPGGDVRRRPPSR--SPAAKPAAPARPPVRRLA 2887

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 564352910  499 EKEPAAPASPAPSPVPSPTPAQPQKEQSSTQIPPDTAVPAVPTVPtfptaPPTAAPSVTPSKPMAGTTDREEAT 572
Cdd:PHA03247 2888 RPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPP-----PPPPPRPQPPLAPTTDPAGAGEPS 2956
PTZ00121 PTZ00121
MAEBL; Provisional
 132-223 6.55e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 43.59  E-value: 6.55e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  132 QDVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAK--------ALREKQLQERRRRLEEQRLKAEQRRAALEERQR 203
Cdd:PTZ00121 1555 EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARieevmklyEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKK 1634

                          90       100
                  ....*....|....*....|
gi 564352910  204 QKLEKNKERYEAAIQRSVKK 223
Cdd:PTZ00121 1635 VEQLKKKEAEEKKKAEELKK 1654
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
9-130 4.58e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 40.53  E-value: 4.58e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910   9 PGPGAPAAVLARIPQEPRPSPEGDPSPPPPPTPMSALVPDTPPDTPPAMKNASTPQQLPLEPVSPTgQVSPQPAPPPDEC 88
Cdd:PRK14971 370 SGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAV-PVNPPSTAPQAVR 448

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 564352910  89 PSSeAKSRGPTPTATGPRDAKPSQRSSQPsPTAVPASDSPSA 130
Cdd:PRK14971 449 PAQ-FKEEKKIPVSKVSSLGPSTLRPIQE-KAEQATGNIKEA 488
 
Name Accession Description Interval E-value
MAP7 pfam05672
MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is ...
 560-698 7.84e-22

MAP7 (E-MAP-115) family; The organization of microtubules varies with the cell type and is presumably controlled by tissue-specific microtubule-associated proteins (MAPs). The 115-kDa epithelial MAP (E-MAP-115/MAP7) has been identified as a microtubule-stabilising protein predominantly expressed in cell lines of epithelial origin. The binding of this microtubule associated protein is nucleotide independent.


Pssm-ID: 461709 [Multi-domain]  Cd Length: 153  Bit Score: 92.80  E-value: 7.84e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  560 KPMAGTTDREEATRLLAEKRRQAREQREREEQERKLQAERDKRMREEQ--------------LAREAEARAEREAEARRR 625
Cdd:pfam05672   1 KPSAGTTDAEEAARILAEKRRQAREQREREEQERLEKEEEERLRKEELrrraeeerarreeeARRLEEERRREEEERQRK 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 564352910  626 EEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQKEEQERQERRKRLEEIMKRTRKSEAAE 698
Cdd:pfam05672  81 AEEEAEEREQREQEEQERLQKQKEEAEAKAREEAERQRQEREKIMQQEEQERLERKKRIEEIMKRTRKSDQAE 153
PHA03247 PHA03247
large tegument protein UL36; Provisional
 280-572 5.75e-09

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 60.34  E-value: 5.75e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  280 VTLPRNGRDQGR---GSGPGRRPTRARAGASLA--------------PGPHPDRTHPSAAVPVCPRSASAS----PLTPC 338
Cdd:PHA03247 2661 VSRPRRARRLGRaaqASSPPQRPRRRAARPTVGsltsladpppppptPEPAPHALVSATPLPPGPAAARQAspalPAAPA 2740

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  339 SAPRSAHRCTPSGERPERRKPGAGGSPALVRRRLEATPVQKKEKKDKERENEKEKSALARERNlkkRQSLPASIRPRIST 418
Cdd:PHA03247 2741 PPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWD---PADPPAAVLAPAAA 2817

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  419 gaeLSTKSKARPTSPSTTWHRPASPCPSPGPghtlpPKPPSPRGTTASPKGRIRRKEEAKesPSPSGPEDKNHSKSRTAE 498
Cdd:PHA03247 2818 ---LPPAASPAGPLPPPTSAQPTAPPPPPGP-----PPPSLPLGGSVAPGGDVRRRPPSR--SPAAKPAAPARPPVRRLA 2887

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 564352910  499 EKEPAAPASPAPSPVPSPTPAQPQKEQSSTQIPPDTAVPAVPTVPtfptaPPTAAPSVTPSKPMAGTTDREEAT 572
Cdd:PHA03247 2888 RPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPP-----PPPPPRPQPPLAPTTDPAGAGEPS 2956
PHA03247 PHA03247
large tegument protein UL36; Provisional
 283-563 3.91e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.16  E-value: 3.91e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  283 PRNGRDQgRGSGPGRRPTRARAGASLAPGPHPDRTHPSAAVPVCPRSASA-SPLTPCSAPRSAHRCTPSGERPERRKPGA 361
Cdd:PHA03247 2598 PRAPVDD-RGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVpPPERPRDDPAPGRVSRPRRARRLGRAAQA 2676

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  362 GGSPALVRRRLEATPVQKKEKKDKERENEKEKSAlareRNLKKRQSLPASIRPRISTGAELSTKSKARPTSPSTTWHRPA 441
Cdd:PHA03247 2677 SSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEP----APHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPG 2752

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  442 SPCPSPGPGHTL-PPKPPSPRGTTASPKGRIRRKEEAKESPSpsgpedknhsksrTAEEKEPAAPASPAPSPVPSPTPAQ 520
Cdd:PHA03247 2753 GPARPARPPTTAgPPAPAPPAAPAAGPPRRLTRPAVASLSES-------------RESLPSPWDPADPPAAVLAPAAALP 2819

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 564352910  521 PQKEQSSTQIPPDTAVPAVPTVPTFPTAPPTA-APSVTPSKPMA 563
Cdd:PHA03247 2820 PAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPlGGSVAPGGDVR 2863
PTZ00121 PTZ00121
MAEBL; Provisional
 132-223 6.55e-04

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 43.59  E-value: 6.55e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  132 QDVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAK--------ALREKQLQERRRRLEEQRLKAEQRRAALEERQR 203
Cdd:PTZ00121 1555 EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARieevmklyEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKK 1634

                          90       100
                  ....*....|....*....|
gi 564352910  204 QKLEKNKERYEAAIQRSVKK 223
Cdd:PTZ00121 1635 VEQLKKKEAEEKKKAEELKK 1654
PHA03247 PHA03247
large tegument protein UL36; Provisional
 409-561 7.06e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.39  E-value: 7.06e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  409 PASIRPRISTGAELSTKSKARPTSPSTTWHRPASPCPSPGP-------GHTLP-PKPPSPRGTTASPKGRIRRKEEAK-- 478
Cdd:PHA03247 2593 PQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPaanepdpHPPPTvPPPERPRDDPAPGRVSRPRRARRLgr 2672

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  479 --------ESPSPSGPEDKNHSKSRTAEEKEPAAPASPAPSPVPSPTPAQPQKEQSSTQIPPDTAVPAVPTVPTFPTAPP 550
Cdd:PHA03247 2673 aaqassppQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPG 2752

                         170
                  ....*....|.
gi 564352910  551 TAAPSVTPSKP 561
Cdd:PHA03247 2753 GPARPARPPTT 2763
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
289-467 1.40e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 42.14  E-value: 1.40e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910 289 QGRGSGPGRRPT-RARAGASLAPGPHPDRTHPSAAVPVCPRSASASPLTPCSAPRSAHRCTPSGERPERRKPGAGGSPAL 367
Cdd:PRK07003 371 GVPARVAGAVPApGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVP 450

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910 368 VRRRLEATPVQKKEKKDKERENEKEKSALArernlkkRQSLPASIRPRISTGAELSTKSKARPTSPsttwhrPASPCPSP 447
Cdd:PRK07003 451 AKANARASADSRCDERDAQPPADSGSASAP-------ASDAPPDAAFEPAPRAAAPSAATPAAVPD------ARAPAAAS 517

                        170       180
                 ....*....|....*....|
gi 564352910 448 GPGHTLPPKPPSPRGTTASP 467
Cdd:PRK07003 518 REDAPAAAAPPAPEARPPTP 537
PHA03247 PHA03247
large tegument protein UL36; Provisional
 72-495 2.21e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.85  E-value: 2.21e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910   72 SPTGQVSPQPAPPPDECPSSEAKSRGPTPTATGPRDAKPSQRSSQPSPTAVPASDSPSAKQDVKKAGERHKLAKERREER 151
Cdd:PHA03247 2607 DPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRR 2686

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  152 AKYLAAKKAVWLEKEEKAKALREKQLQERRRRLEEQRLKAEQRRAAleerqrqkleknKERYEAAIQRSVKKTWAEIRQQ 231
Cdd:PHA03247 2687 AARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQAS------------PALPAAPAPPAVPAGPATPGGP 2754

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  232 RWSWAGALHHNSPgrktnRSLQLSAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQgrgSGPGRRPTRARAGASLAPG 311
Cdd:PHA03247 2755 ARPARPPTTAGPP-----APAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADP---PAAVLAPAAALPPAASPAG 2826

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  312 PHPDRTHPSAAVPVCPRSASASPLTPCSAprsahrCTPSGerPERRKPGAGGSPALVrrrleATPVQKKEKKDKERENEK 391
Cdd:PHA03247 2827 PLPPPTSAQPTAPPPPPGPPPPSLPLGGS------VAPGG--DVRRRPPSRSPAAKP-----AAPARPPVRRLARPAVSR 2893

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  392 EKSALARERNLKKRQSLPASIRPRISTGAELSTKSKARPTSPSTTWHRPASPCPSPGPGHTLPPKPPSPR------GTTA 465
Cdd:PHA03247 2894 STESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWlgalvpGRVA 2973

                         410       420       430
                  ....*....|....*....|....*....|
gi 564352910  466 SPKGRIRRKEEAKESPSPSGPEDKNHSKSR 495
Cdd:PHA03247 2974 VPRFRVPQPAPSREAPASSTPPLTGHSLSR 3003
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 275-577 2.95e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 41.31  E-value: 2.95e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  275 RSRSAVTLPRNGRDQGRGSGPGRRPTRARAGASLAPGPHPDR----------THPSAAVPVCPRSASASPLTPCSAPRSA 344
Cdd:PHA03307   93 STLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLsemlrpvgspGPPPAASPPAAGASPAAVASDAASSRQA 172

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  345 HRCTPSGERPERRKPGAGGSPALVRRRLEATPVQKKEKKDKERENEKEKSALARERNLKKRQSLPASIRPRISTGAELST 424
Cdd:PHA03307  173 ALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPE 252

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  425 KSKARP---TSPSTTWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRIRRKEEAKESPSPSGPEDKNHSKSRTAEEKE 501
Cdd:PHA03307  253 NECPLPrpaPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSS 332

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 564352910  502 PAAPASPAPSPVpsptpaqpqkeQSSTQIPPDTAVPAVPTVPTFPTAPPTAAPSVTPSKPmAGTTDREEATRLLAE 577
Cdd:PHA03307  333 SESSRGAAVSPG-----------PSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAAS-AGRPTRRRARAAVAG 396
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
9-130 4.58e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 40.53  E-value: 4.58e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910   9 PGPGAPAAVLARIPQEPRPSPEGDPSPPPPPTPMSALVPDTPPDTPPAMKNASTPQQLPLEPVSPTgQVSPQPAPPPDEC 88
Cdd:PRK14971 370 SGGRGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAV-PVNPPSTAPQAVR 448

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 564352910  89 PSSeAKSRGPTPTATGPRDAKPSQRSSQPsPTAVPASDSPSA 130
Cdd:PRK14971 449 PAQ-FKEEKKIPVSKVSSLGPSTLRPIQE-KAEQATGNIKEA 488
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 403-574 7.32e-03

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 40.06  E-value: 7.32e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910 403 KKRQSLPASIRPRISTGAELSTKSKARPTSPSttwhRPASPCPSPGPGHTLPPKPPSprgttaSPKGRIRRKEEAKESps 482
Cdd:PTZ00449 609 PKSPKLPELLDIPKSPKRPESPKSPKRPPPPQ----RPSSPERPEGPKIIKSPKPPK------SPKPPFDPKFKEKFY-- 676

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910 483 psgpEDKNHSKSRTAEEKEPAAPASPAPSPVPSPTPAQPQKEQSSTQIPPdtavPAVPTVPTFPTAPPTAAPSVTPSKPM 562
Cdd:PTZ00449 677 ----DDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLP----PKLPRDEEFPFEPIGDPDAEQPDDIE 748

                        170
                 ....*....|..
gi 564352910 563 AGTTDREEATRL 574
Cdd:PTZ00449 749 FFTPPEEERTFF 760
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
59-142 7.40e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 39.23  E-value: 7.40e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564352910  59 NASTPQQLPLE-PVSPTGQV---SPQPAPPPDECPSSEAKSRGPTPTATgprdakpsqrssQPSPTAVPASDSPSAKQDV 134
Cdd:PRK13042  29 NATTPSSTKVEaPQSTPPSTkveAPQSKPNATTPPSTKVEAPQQTPNAT------------TPSSTKVETPQSPTTKQVP 96


                 ....*...
gi 564352910 135 KKAGERHK 142
Cdd:PRK13042  97 TEINPKFK 104
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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