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Conserved domains on  [gi|356521709|ref|XP_003529494|]
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molybdopterin synthase catalytic subunit [Glycine max]

Protein Classification

molybdopterin synthase catalytic subunit( domain architecture ID 10791341)

molybdopterin synthase catalytic subunit is the catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin

CATH:  3.90.1170.40
EC:  2.8.1.12
Gene Ontology:  GO:0006777|GO:0030366|GO:1990140
PubMed:  35744859
SCOP:  4001136

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN02390 PLN02390
molybdopterin synthase catalytic subunit
30-140 5.09e-76

molybdopterin synthase catalytic subunit


:

Pssm-ID: 178014  Cd Length: 111  Bit Score: 223.03  E-value: 5.09e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356521709  30 APQAGAIATFSGTTRDTFEGKTVVELRYEAYVPMAIRCIKSICSSARASWNIHSVAVAHRLGTVPVGETSVFVAVSSVHR 109
Cdd:PLN02390   1 DPQAGAIATFSGTTRDTFEGKTVLELRYEAYVPMALRELRKICDEARSRWSLHKIAVAHRLGPVPVGETSVFVAVSSVHR 80
                         90       100       110
                 ....*....|....*....|....*....|.
gi 356521709 110 ADALEACRFLIDEIKAQVPIWKKEVYSNGEV 140
Cdd:PLN02390  81 ADALDACKFLIDELKASVPIWKKEVYDDGEV 111
 
Name Accession Description Interval E-value
PLN02390 PLN02390
molybdopterin synthase catalytic subunit
30-140 5.09e-76

molybdopterin synthase catalytic subunit


Pssm-ID: 178014  Cd Length: 111  Bit Score: 223.03  E-value: 5.09e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356521709  30 APQAGAIATFSGTTRDTFEGKTVVELRYEAYVPMAIRCIKSICSSARASWNIHSVAVAHRLGTVPVGETSVFVAVSSVHR 109
Cdd:PLN02390   1 DPQAGAIATFSGTTRDTFEGKTVLELRYEAYVPMALRELRKICDEARSRWSLHKIAVAHRLGPVPVGETSVFVAVSSVHR 80
                         90       100       110
                 ....*....|....*....|....*....|.
gi 356521709 110 ADALEACRFLIDEIKAQVPIWKKEVYSNGEV 140
Cdd:PLN02390  81 ADALDACKFLIDELKASVPIWKKEVYDDGEV 111
MoaE cd00756
MoaE family. Members of this family are involved in biosynthesis of the molybdenum cofactor ...
19-142 1.54e-59

MoaE family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor for a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), which carries the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase in the second major step in Moco biosynthesis. MPT synthase is a heterotetramer consisting of two large (MoaE) and two small (MoaD) subunits.


Pssm-ID: 238385 [Multi-domain]  Cd Length: 124  Bit Score: 181.56  E-value: 1.54e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356521709  19 IDVAKYMNFVGAPQAGAIATFSGTTRDTFEGKTVVELRYEAYVPMAIRCIKSICSSARASWNIHSVAVAHRLGTVPVGET 98
Cdd:cd00756    1 FDLAELLAALRDPEAGAVVTFVGTVRDHDEGKGVEALEYEAYPPMAEKELEEIAEEARERWGLLRVAIIHRVGRLPPGEA 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 356521709  99 SVFVAVSSVHRADALEACRFLIDEIKAQVPIWKKEVYSNGEVWK 142
Cdd:cd00756   81 IVLVAVSSPHRKEAFEACEFLIDRLKHRAPIWKKEIFEGGEEWV 124
MoaE COG0314
Molybdopterin synthase catalytic subunit MoaE [Coenzyme transport and metabolism]; ...
18-143 3.30e-59

Molybdopterin synthase catalytic subunit MoaE [Coenzyme transport and metabolism]; Molybdopterin synthase catalytic subunit MoaE is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 440083 [Multi-domain]  Cd Length: 143  Bit Score: 181.53  E-value: 3.30e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356521709  18 PIDVAKYMNFV--GAPQAGAIATFSGTTRDTFEGKTVVELRYEAYVPMAIRCIKSICSSARASWNIHSVAVAHRLGTVPV 95
Cdd:COG0314   10 PFDLAAELAALraSDPEAGAVVTFVGTVRDHNDGRRVTALEYEAYPPMAEKELAEIAEEAAERWGLLDVAVIHRVGRLEP 89
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 356521709  96 GETSVFVAVSSVHRADALEACRFLIDEIKAQVPIWKKEVYSNGEVWKE 143
Cdd:COG0314   90 GEPIVLVAVSSAHRKEAFEACRFLIDRLKTRAPIWKKEIFEDGEEWVE 137
MoaE pfam02391
MoaE protein; This family contains the MoaE protein that is involved in biosynthesis of ...
15-126 9.31e-56

MoaE protein; This family contains the MoaE protein that is involved in biosynthesis of molybdopterin. Molybdopterin, the universal component of the pterin molybdenum cofactors, contains a dithiolene group serving to bind Mo. Addition of the dithiolene sulfurs to a molybdopterin precursor requires the activity of the converting factor. Converting factor contains the MoaE and MoaD proteins.


Pssm-ID: 460546  Cd Length: 113  Bit Score: 171.87  E-value: 9.31e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356521709   15 TLNPIDVAKYMNFVGAPQAGAIATFSGTTRDTFEGKTVVELRYEAYVPMAIRCIKSICSSARASWNIHSVAVAHRLGTVP 94
Cdd:pfam02391   2 TEEPLDVAEIAALVSDPEAGAVVTFVGTVRDHFDGKKVTALEYEAYPPMAEKELAEIAEEARERWPLLDVAIVHRVGRLP 81
                          90       100       110
                  ....*....|....*....|....*....|..
gi 356521709   95 VGETSVFVAVSSVHRADALEACRFLIDEIKAQ 126
Cdd:pfam02391  82 VGEAIVLVAVSSPHRAEAFEACEYLIDELKAR 113
 
Name Accession Description Interval E-value
PLN02390 PLN02390
molybdopterin synthase catalytic subunit
30-140 5.09e-76

molybdopterin synthase catalytic subunit


Pssm-ID: 178014  Cd Length: 111  Bit Score: 223.03  E-value: 5.09e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356521709  30 APQAGAIATFSGTTRDTFEGKTVVELRYEAYVPMAIRCIKSICSSARASWNIHSVAVAHRLGTVPVGETSVFVAVSSVHR 109
Cdd:PLN02390   1 DPQAGAIATFSGTTRDTFEGKTVLELRYEAYVPMALRELRKICDEARSRWSLHKIAVAHRLGPVPVGETSVFVAVSSVHR 80
                         90       100       110
                 ....*....|....*....|....*....|.
gi 356521709 110 ADALEACRFLIDEIKAQVPIWKKEVYSNGEV 140
Cdd:PLN02390  81 ADALDACKFLIDELKASVPIWKKEVYDDGEV 111
MoaE cd00756
MoaE family. Members of this family are involved in biosynthesis of the molybdenum cofactor ...
19-142 1.54e-59

MoaE family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor for a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), which carries the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase in the second major step in Moco biosynthesis. MPT synthase is a heterotetramer consisting of two large (MoaE) and two small (MoaD) subunits.


Pssm-ID: 238385 [Multi-domain]  Cd Length: 124  Bit Score: 181.56  E-value: 1.54e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356521709  19 IDVAKYMNFVGAPQAGAIATFSGTTRDTFEGKTVVELRYEAYVPMAIRCIKSICSSARASWNIHSVAVAHRLGTVPVGET 98
Cdd:cd00756    1 FDLAELLAALRDPEAGAVVTFVGTVRDHDEGKGVEALEYEAYPPMAEKELEEIAEEARERWGLLRVAIIHRVGRLPPGEA 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 356521709  99 SVFVAVSSVHRADALEACRFLIDEIKAQVPIWKKEVYSNGEVWK 142
Cdd:cd00756   81 IVLVAVSSPHRKEAFEACEFLIDRLKHRAPIWKKEIFEGGEEWV 124
MoaE COG0314
Molybdopterin synthase catalytic subunit MoaE [Coenzyme transport and metabolism]; ...
18-143 3.30e-59

Molybdopterin synthase catalytic subunit MoaE [Coenzyme transport and metabolism]; Molybdopterin synthase catalytic subunit MoaE is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 440083 [Multi-domain]  Cd Length: 143  Bit Score: 181.53  E-value: 3.30e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356521709  18 PIDVAKYMNFV--GAPQAGAIATFSGTTRDTFEGKTVVELRYEAYVPMAIRCIKSICSSARASWNIHSVAVAHRLGTVPV 95
Cdd:COG0314   10 PFDLAAELAALraSDPEAGAVVTFVGTVRDHNDGRRVTALEYEAYPPMAEKELAEIAEEAAERWGLLDVAVIHRVGRLEP 89
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 356521709  96 GETSVFVAVSSVHRADALEACRFLIDEIKAQVPIWKKEVYSNGEVWKE 143
Cdd:COG0314   90 GEPIVLVAVSSAHRKEAFEACRFLIDRLKTRAPIWKKEIFEDGEEWVE 137
MoaE pfam02391
MoaE protein; This family contains the MoaE protein that is involved in biosynthesis of ...
15-126 9.31e-56

MoaE protein; This family contains the MoaE protein that is involved in biosynthesis of molybdopterin. Molybdopterin, the universal component of the pterin molybdenum cofactors, contains a dithiolene group serving to bind Mo. Addition of the dithiolene sulfurs to a molybdopterin precursor requires the activity of the converting factor. Converting factor contains the MoaE and MoaD proteins.


Pssm-ID: 460546  Cd Length: 113  Bit Score: 171.87  E-value: 9.31e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356521709   15 TLNPIDVAKYMNFVGAPQAGAIATFSGTTRDTFEGKTVVELRYEAYVPMAIRCIKSICSSARASWNIHSVAVAHRLGTVP 94
Cdd:pfam02391   2 TEEPLDVAEIAALVSDPEAGAVVTFVGTVRDHFDGKKVTALEYEAYPPMAEKELAEIAEEARERWPLLDVAIVHRVGRLP 81
                          90       100       110
                  ....*....|....*....|....*....|..
gi 356521709   95 VGETSVFVAVSSVHRADALEACRFLIDEIKAQ 126
Cdd:pfam02391  82 VGEAIVLVAVSSPHRAEAFEACEYLIDELKAR 113
moaE PRK10678
molybdopterin synthase catalytic subunit MoaE;
34-143 1.36e-25

molybdopterin synthase catalytic subunit MoaE;


Pssm-ID: 182642  Cd Length: 150  Bit Score: 96.35  E-value: 1.36e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356521709  34 GAIATFSGTTRDTFEGKTVVELRYEAYVPMAIRCIKSICSSARASWNIHSVAVAHRLGTVPVGETSVFVAVSSVHRADAL 113
Cdd:PRK10678  29 GAVVTFTGKVRNHNLGDSVKALTLEHYPGMTEKALAEIVDEARSRWPLGRVTVIHRVGELWPGDEIVFVGVTSAHRSSAF 108
                         90       100       110
                 ....*....|....*....|....*....|
gi 356521709 114 EACRFLIDEIKAQVPIWKKEVYSNGEVWKE 143
Cdd:PRK10678 109 EAGQFIMDYLKTRAPFWKREATPEGDRWVE 138
PRK14493 PRK14493
putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE; ...
2-141 8.07e-22

putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE; Provisional


Pssm-ID: 237730 [Multi-domain]  Cd Length: 274  Bit Score: 89.29  E-value: 8.07e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 356521709   2 AAEDDRNLVEIME------TLNPIdVAKYMNFVGAPQAGAIATFSGTTR---DTFEGKTVVeLRYEAYVPMAIRCIKSIC 72
Cdd:PRK14493 123 ADLDTEDLVAALEsqppyvTLESL-VAKVKRSPDADKAGAIATFTGRVRakeDADDEPTEY-LEFEKYDGVADERMAAIR 200
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 356521709  73 SSARASWNIHSVAVAHRLGTVPVGETSVFVAVSSVHRADALEACRFLIDEIKAQVPIWKKEVYSNGEVW 141
Cdd:PRK14493 201 EELKQRDGVFEVLLHHRTGVIEAGEDIVFVVVLAGHRQEAFRAVSDGIDRLKDEVPIFKKEVTVDEEFW 269
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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