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Conserved domains on  [gi|255575683|ref|XP_002528741|]
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cell division protein FtsZ homolog 2-1, chloroplastic isoform X1 [Ricinus communis]

Protein Classification

cell division protein FtsZ( domain architecture ID 11415192)

cell division protein FtsZ assembles into a Z ring that provides the framework for the cell division apparatus

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
137-475 3.06e-160

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 457.66  E-value: 3.06e-160
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 137 SNAVNRMIESAMKGVEFWIVNTDVQAMKMSPVfpENRLQIGQELTRGLGAGGNPEIGMNAAKESKEAIEEALYGSDMVFV 216
Cdd:COG0206   24 GNAVNRMIEAGLEGVEFIAANTDAQALENSKA--PTKIQLGEKLTRGLGAGANPEVGRKAAEESREEIREALEGADMVFI 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 217 TAGMGGGTGTGGAPVIASVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAVSQSTPVTE 296
Cdd:COG0206  102 TAGMGGGTGTGAAPVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPNDKLLEVADKNTPLLE 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 297 AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIG-IERATGI 375
Cdd:COG0206  182 AFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISSPLLEDVsISGAKGV 261
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 376 VWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKrQEENEGRPLQAGQLSGADVTFGI 455
Cdd:COG0206  262 LVNITGGSDLTLDEVNEAAEIIQEEADPDANIIFGAVIDESLGDEIRVTVIATGFD-SEAIVGEEETERPLEETEPAEDL 340
                        330       340
                 ....*....|....*....|
gi 255575683 456 srrpssftesgsvEIPEFLK 475
Cdd:COG0206  341 -------------DIPAFLR 347
 
Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
137-475 3.06e-160

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 457.66  E-value: 3.06e-160
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 137 SNAVNRMIESAMKGVEFWIVNTDVQAMKMSPVfpENRLQIGQELTRGLGAGGNPEIGMNAAKESKEAIEEALYGSDMVFV 216
Cdd:COG0206   24 GNAVNRMIEAGLEGVEFIAANTDAQALENSKA--PTKIQLGEKLTRGLGAGANPEVGRKAAEESREEIREALEGADMVFI 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 217 TAGMGGGTGTGGAPVIASVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAVSQSTPVTE 296
Cdd:COG0206  102 TAGMGGGTGTGAAPVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPNDKLLEVADKNTPLLE 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 297 AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIG-IERATGI 375
Cdd:COG0206  182 AFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISSPLLEDVsISGAKGV 261
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 376 VWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKrQEENEGRPLQAGQLSGADVTFGI 455
Cdd:COG0206  262 LVNITGGSDLTLDEVNEAAEIIQEEADPDANIIFGAVIDESLGDEIRVTVIATGFD-SEAIVGEEETERPLEETEPAEDL 340
                        330       340
                 ....*....|....*....|
gi 255575683 456 srrpssftesgsvEIPEFLK 475
Cdd:COG0206  341 -------------DIPAFLR 347
FtsZ_type1 cd02201
Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the ...
137-429 1.45e-148

Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.


Pssm-ID: 276961 [Multi-domain]  Cd Length: 303  Bit Score: 426.04  E-value: 1.45e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 137 SNAVNRMIESAMKGVEFWIVNTDVQAMKMSPVfpENRLQIGQELTRGLGAGGNPEIGMNAAKESKEAIEEALYGSDMVFV 216
Cdd:cd02201   13 GNAVNRMIESGLEGVEFIAINTDAQALEKSKA--PNKIQIGEKLTRGLGAGGDPEVGRKAAEESREEIKEALKGADMVFI 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 217 TAGMGGGTGTGGAPVIASVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAVSQSTPVTE 296
Cdd:cd02201   91 TAGMGGGTGTGAAPVIAKIAKEMGALTVAVVTLPFSFEGKKRMRNAEEGLEELKKYVDTLIVIPNDKLLEIVGKNLPLLE 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 297 AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIV 376
Cdd:cd02201  171 AFKKADEVLAQAVKGITDLITKPGLINLDFADVKTVMKNGGLALMGIGEASGENRAEEAVEKALNSPLLEDDIKGAKGVL 250
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 255575683 377 WNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATG 429
Cdd:cd02201  251 VNITGGPDLTLEEVNEAAEIITEKADPDANIIFGAVIDEELGDEIRVTVIATG 303
ftsZ TIGR00065
cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found ...
137-437 9.49e-124

cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis. [Cellular processes, Cell division]


Pssm-ID: 272884 [Multi-domain]  Cd Length: 349  Bit Score: 364.71  E-value: 9.49e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683  137 SNAVNRMIESAMKGVEFWIVNTDVQAMKMSPVfpENRLQIGQELTRGLGAGGNPEIGMNAAKESKEAIEEALYGSDMVFV 216
Cdd:TIGR00065  30 NNTVNRMLEEGVEGVEFIAINTDAQHLKTTKA--DKKILIGKKLTRGLGAGGNPEIGRKAAEESRDEIRKLLEGADMVFI 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683  217 TAGMGGGTGTGGAPVIASVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAVSQsTPVTE 296
Cdd:TIGR00065 108 TAGMGGGTGTGAAPVVAKIAKELGALTVAVVTKPFKFEGLKRRKKAEEGLERLKQAVDTLIVIPNDKLLEVVPN-LPLND 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683  297 AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGK---TRARDAALNAIQSPLLD-IGIERA 372
Cdd:TIGR00065 187 AFKVADDVLVRAVKGISELITKPGLINIDFADVRAVMSGGGVAMMGIGEALGEdtaNRAFEAVRKALSSPLLDvDKISGA 266
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 255575683  373 TGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEENE 437
Cdd:TIGR00065 267 KGALVHITGGADLTLLEAEEIQEIITSELDQDANIIWGAIIDPNLEDEIRVTIVATGVKSQIFFG 331
PRK13018 PRK13018
cell division protein FtsZ; Provisional
137-434 3.32e-121

cell division protein FtsZ; Provisional


Pssm-ID: 237273 [Multi-domain]  Cd Length: 378  Bit Score: 359.32  E-value: 3.32e-121
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 137 SNAVNRMIESAMKGVEFWIVNTDVQAMKMSPVfpENRLQIGQELTRGLGAGGNPEIGMNAAKESKEAIEEALYGSDMVFV 216
Cdd:PRK13018  41 NNTINRLYEIGIEGAETIAINTDAQHLAMIKA--DKKILIGKSLTRGLGAGGDPEVGRKAAEESRDEIKEVLKGADLVFV 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 217 TAGMGGGTGTGGAPVIASVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAVsQSTPVTE 296
Cdd:PRK13018 119 TAGMGGGTGTGAAPVVAEIAKEQGALVVGVVTKPFKFEGRARMQKAEEGIERLREAADTVIVIDNNRLLDIV-PNLPIAD 197
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 297 AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIV 376
Cdd:PRK13018 198 AFSVADEVIAETVKGITETITKPSLINLDFADVKSVMKGGGVAMMGVGEAKGQNRAMEAVRAALANPLLDVDYRGAKGAL 277
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 255575683 377 WNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQE 434
Cdd:PRK13018 278 VHITGGPDLTLKEANEAASRITEELDPEANIIWGARIDPDMEGKVRVMVIMTGVKSAQ 335
Tubulin smart00864
Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the ...
137-320 6.88e-62

Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.


Pssm-ID: 214867 [Multi-domain]  Cd Length: 192  Bit Score: 200.02  E-value: 6.88e-62
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683   137 SNAVNRMIESamKGVEFWIVNTDVQAMKMSPVFPeNRLQIGQELTRGLGAGGNPEIGMNAAKESKEAIEEALYGSDMVFV 216
Cdd:smart00864  12 PNAVNVDLEP--GVIDGVRANTDAQALNPESLAS-GKIQAGNNWTRGLGAGADPEVGREAAEESLDEIREELEGADGVFI 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683   217 TAGMGGGTGTGGAPVIASVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAVSQSTPVTE 296
Cdd:smart00864  89 TAGMGGGTGTGAAPVIAEIAKEYGILTVAVVTKPFSFEGVVRPYNAELGLEELREHVDSLIVIDNDALLDICGRKLPLRP 168
                          170       180
                   ....*....|....*....|....
gi 255575683   297 AFNLADDILRQGVRGISDIITIPG 320
Cdd:smart00864 169 AFKDANDLLAQAVSGITDLIRFPG 192
FtsZ_C pfam12327
FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. ...
337-431 4.58e-35

FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ is a GTPase, like tubulin. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea.


Pssm-ID: 463534 [Multi-domain]  Cd Length: 95  Bit Score: 126.16  E-value: 4.58e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683  337 GSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPS 416
Cdd:pfam12327   1 GVAMMGTGEASGENRAEEAAEAAISSPLLDVDLSGARGVLVNITGGPDLTLFEANEAAETIREEVDPDANIIFGTVIDPE 80
                          90
                  ....*....|....*
gi 255575683  417 LSGQVSITLIATGFK 431
Cdd:pfam12327  81 LEDEIRVTVVATGID 95
 
Name Accession Description Interval E-value
FtsZ COG0206
Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];
137-475 3.06e-160

Cell division GTPase FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 439976 [Multi-domain]  Cd Length: 347  Bit Score: 457.66  E-value: 3.06e-160
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 137 SNAVNRMIESAMKGVEFWIVNTDVQAMKMSPVfpENRLQIGQELTRGLGAGGNPEIGMNAAKESKEAIEEALYGSDMVFV 216
Cdd:COG0206   24 GNAVNRMIEAGLEGVEFIAANTDAQALENSKA--PTKIQLGEKLTRGLGAGANPEVGRKAAEESREEIREALEGADMVFI 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 217 TAGMGGGTGTGGAPVIASVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAVSQSTPVTE 296
Cdd:COG0206  102 TAGMGGGTGTGAAPVIAEIAKELGALTVGVVTKPFSFEGKRRMRQAEEGIEELRKYVDTLIVIPNDKLLEVADKNTPLLE 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 297 AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIG-IERATGI 375
Cdd:COG0206  182 AFKKADDVLRQAVQGITDLITKPGLINLDFADVKTVMSNGGVALMGIGEASGENRAEEAAEKAISSPLLEDVsISGAKGV 261
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 376 VWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKrQEENEGRPLQAGQLSGADVTFGI 455
Cdd:COG0206  262 LVNITGGSDLTLDEVNEAAEIIQEEADPDANIIFGAVIDESLGDEIRVTVIATGFD-SEAIVGEEETERPLEETEPAEDL 340
                        330       340
                 ....*....|....*....|
gi 255575683 456 srrpssftesgsvEIPEFLK 475
Cdd:COG0206  341 -------------DIPAFLR 347
FtsZ_type1 cd02201
Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the ...
137-429 1.45e-148

Filamenting temperature sensitive mutant Z, type 1; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. FtsZ is capable of polymerizing in a GTP-driven process into structures similar to those formed by tubulin. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells.


Pssm-ID: 276961 [Multi-domain]  Cd Length: 303  Bit Score: 426.04  E-value: 1.45e-148
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 137 SNAVNRMIESAMKGVEFWIVNTDVQAMKMSPVfpENRLQIGQELTRGLGAGGNPEIGMNAAKESKEAIEEALYGSDMVFV 216
Cdd:cd02201   13 GNAVNRMIESGLEGVEFIAINTDAQALEKSKA--PNKIQIGEKLTRGLGAGGDPEVGRKAAEESREEIKEALKGADMVFI 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 217 TAGMGGGTGTGGAPVIASVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAVSQSTPVTE 296
Cdd:cd02201   91 TAGMGGGTGTGAAPVIAKIAKEMGALTVAVVTLPFSFEGKKRMRNAEEGLEELKKYVDTLIVIPNDKLLEIVGKNLPLLE 170
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 297 AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIV 376
Cdd:cd02201  171 AFKKADEVLAQAVKGITDLITKPGLINLDFADVKTVMKNGGLALMGIGEASGENRAEEAVEKALNSPLLEDDIKGAKGVL 250
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 255575683 377 WNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATG 429
Cdd:cd02201  251 VNITGGPDLTLEEVNEAAEIITEKADPDANIIFGAVIDEELGDEIRVTVIATG 303
ftsZ TIGR00065
cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found ...
137-437 9.49e-124

cell division protein FtsZ; This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis. [Cellular processes, Cell division]


Pssm-ID: 272884 [Multi-domain]  Cd Length: 349  Bit Score: 364.71  E-value: 9.49e-124
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683  137 SNAVNRMIESAMKGVEFWIVNTDVQAMKMSPVfpENRLQIGQELTRGLGAGGNPEIGMNAAKESKEAIEEALYGSDMVFV 216
Cdd:TIGR00065  30 NNTVNRMLEEGVEGVEFIAINTDAQHLKTTKA--DKKILIGKKLTRGLGAGGNPEIGRKAAEESRDEIRKLLEGADMVFI 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683  217 TAGMGGGTGTGGAPVIASVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAVSQsTPVTE 296
Cdd:TIGR00065 108 TAGMGGGTGTGAAPVVAKIAKELGALTVAVVTKPFKFEGLKRRKKAEEGLERLKQAVDTLIVIPNDKLLEVVPN-LPLND 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683  297 AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGK---TRARDAALNAIQSPLLD-IGIERA 372
Cdd:TIGR00065 187 AFKVADDVLVRAVKGISELITKPGLINIDFADVRAVMSGGGVAMMGIGEALGEdtaNRAFEAVRKALSSPLLDvDKISGA 266
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 255575683  373 TGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEENE 437
Cdd:TIGR00065 267 KGALVHITGGADLTLLEAEEIQEIITSELDQDANIIWGAIIDPNLEDEIRVTIVATGVKSQIFFG 331
PRK13018 PRK13018
cell division protein FtsZ; Provisional
137-434 3.32e-121

cell division protein FtsZ; Provisional


Pssm-ID: 237273 [Multi-domain]  Cd Length: 378  Bit Score: 359.32  E-value: 3.32e-121
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 137 SNAVNRMIESAMKGVEFWIVNTDVQAMKMSPVfpENRLQIGQELTRGLGAGGNPEIGMNAAKESKEAIEEALYGSDMVFV 216
Cdd:PRK13018  41 NNTINRLYEIGIEGAETIAINTDAQHLAMIKA--DKKILIGKSLTRGLGAGGDPEVGRKAAEESRDEIKEVLKGADLVFV 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 217 TAGMGGGTGTGGAPVIASVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAVsQSTPVTE 296
Cdd:PRK13018 119 TAGMGGGTGTGAAPVVAEIAKEQGALVVGVVTKPFKFEGRARMQKAEEGIERLREAADTVIVIDNNRLLDIV-PNLPIAD 197
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 297 AFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIV 376
Cdd:PRK13018 198 AFSVADEVIAETVKGITETITKPSLINLDFADVKSVMKGGGVAMMGVGEAKGQNRAMEAVRAALANPLLDVDYRGAKGAL 277
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 255575683 377 WNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQE 434
Cdd:PRK13018 278 VHITGGPDLTLKEANEAASRITEELDPEANIIWGARIDPDMEGKVRVMVIMTGVKSAQ 335
FtsZ_CetZ-like cd02191
Subfamily of FitZ and Cell-structure-related euryarchaeota tubulin/FtsZ homolog-like; FtsZ is ...
138-429 1.00e-64

Subfamily of FitZ and Cell-structure-related euryarchaeota tubulin/FtsZ homolog-like; FtsZ is a GTPase that is similar to the eukaryotic tubulins and is essential for cell division in prokaryotes. CetZ-like proteins are related to tubulin and FtsZ and co-exists with FtsZ in many archaea. However, a recent study found that Cetz proteins (formerly annotated FtsZ type 2) are not required for cell division. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276960 [Multi-domain]  Cd Length: 308  Bit Score: 211.65  E-value: 1.00e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 138 NAVNRMIESAMK-----GVEFWIVNTDVQAMKMSPVfpENRLQIGQELTRGLGAGGNPEIGMNAAKESKEAIEEALYG-- 210
Cdd:cd02191   14 NLASALQSFDREtgfgaGVETVAINTAAQDLKSLKA--KETLLIGQDRTNGHGVGGNPELGAQAAEEDQEEIMEALEGrv 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 211 -SDMVFVTAGMGGGTGTGGAPVIASVAKSMGI-LTVGIVTTPFSFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAV 288
Cdd:cd02191   92 eADMIFVTTGLGGGTGSGGAPVLAEALKKVYDvLTVAVVTLPFADEGALYMQNAGEGLRTLAEEADALILVDNEKLRSIG 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 289 SqstPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKT-RARDAALNAIQSPLLDI 367
Cdd:cd02191  172 G---SLSEAYDAINEVLARRVGGLLEAIEATGLSVVDFADVKTVMNSGGMAMLGYGSADASInRAREATRRALRTPLLLP 248
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 255575683 368 GIERATGIVWNITGGSD-LTLFEVNAAAEVIYDLVDpTANLIFGAVIDPslSGQVSITLIATG 429
Cdd:cd02191  249 DASGADGALVVIAGEPDtLPLKEVERVRRWVEDETG-SATVRGGDVIDE--SGRLRVLVVLTG 308
Tubulin smart00864
Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the ...
137-320 6.88e-62

Tubulin/FtsZ family, GTPase domain; This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.


Pssm-ID: 214867 [Multi-domain]  Cd Length: 192  Bit Score: 200.02  E-value: 6.88e-62
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683   137 SNAVNRMIESamKGVEFWIVNTDVQAMKMSPVFPeNRLQIGQELTRGLGAGGNPEIGMNAAKESKEAIEEALYGSDMVFV 216
Cdd:smart00864  12 PNAVNVDLEP--GVIDGVRANTDAQALNPESLAS-GKIQAGNNWTRGLGAGADPEVGREAAEESLDEIREELEGADGVFI 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683   217 TAGMGGGTGTGGAPVIASVAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAVSQSTPVTE 296
Cdd:smart00864  89 TAGMGGGTGTGAAPVIAEIAKEYGILTVAVVTKPFSFEGVVRPYNAELGLEELREHVDSLIVIDNDALLDICGRKLPLRP 168
                          170       180
                   ....*....|....*....|....
gi 255575683   297 AFNLADDILRQGVRGISDIITIPG 320
Cdd:smart00864 169 AFKDANDLLAQAVSGITDLIRFPG 192
Tubulin_C smart00865
Tubulin/FtsZ family, C-terminal domain; This domain is found in the tubulin alpha, beta and ...
322-439 1.98e-39

Tubulin/FtsZ family, C-terminal domain; This domain is found in the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. These proteins are GTPases and are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea. This is the C-terminal domain.


Pssm-ID: 214868 [Multi-domain]  Cd Length: 120  Bit Score: 138.45  E-value: 1.98e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683   322 VNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLD-IGIERATGIVWNITGGSDLTLFEVNAAAEVIYDL 400
Cdd:smart00865   1 INVDFADVKTVMVPMGFAMMGIGPASGENRALEAAELAISSPLLEdSNIMGAKGVLVNITGGPDLTLKEVNEAMERIREK 80
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|
gi 255575683   401 VDPTANLIFGAVIDPSLSG-QVSITLIATGFKRQEENEGR 439
Cdd:smart00865  81 ADPDAFIIWGPVIDEELGGdEIRVTVIATGIGSLFKRLSE 120
FtsZ_C pfam12327
FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. ...
337-431 4.58e-35

FtsZ family, C-terminal domain; This family includes the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ is a GTPase, like tubulin. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea.


Pssm-ID: 463534 [Multi-domain]  Cd Length: 95  Bit Score: 126.16  E-value: 4.58e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683  337 GSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPS 416
Cdd:pfam12327   1 GVAMMGTGEASGENRAEEAAEAAISSPLLDVDLSGARGVLVNITGGPDLTLFEANEAAETIREEVDPDANIIFGTVIDPE 80
                          90
                  ....*....|....*
gi 255575683  417 LSGQVSITLIATGFK 431
Cdd:pfam12327  81 LEDEIRVTVVATGID 95
Tubulin pfam00091
Tubulin/FtsZ family, GTPase domain; This family includes the tubulin alpha, beta and gamma ...
137-285 5.45e-27

Tubulin/FtsZ family, GTPase domain; This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.


Pssm-ID: 459669 [Multi-domain]  Cd Length: 190  Bit Score: 107.30  E-value: 5.45e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683  137 SNAVNRMIESAMK---------------GVEFW----IVNTDVQAMKMSPV-FPENRLQIGQELTRGLGAGGNPEIGMNA 196
Cdd:pfam00091  12 NNIGNALWELLCLehgidslnvffsesgSVEFIprslAIDTDPQALNEIKAgFNPNKILLGKEGTGGNGAGGYPEIGREA 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683  197 AKESKEAIEEALYGSDM---VFVTAGMGGGTGTGGAPVIASVAKSM--GILTVGIVTTPFSF-EGRRRAVQAQEGIAALR 270
Cdd:pfam00091  92 AEESLEEIRKEVEGCDMlqgFFITASLGGGTGSGAAPVIAEILKELypGALTVAVVTFPFGFsEGVVRPYNAILGLKELI 171
                         170
                  ....*....|....*
gi 255575683  271 DSVDTLIVIPNDKLL 285
Cdd:pfam00091 172 EHSDSVIVIDNDALY 186
Tubulin_FtsZ_Cetz-like cd00286
Tubulin protein family of FtsZ and CetZ-like; This family includes tubulin alpha-, beta-, ...
170-429 2.79e-14

Tubulin protein family of FtsZ and CetZ-like; This family includes tubulin alpha-, beta-, gamma-, delta-, epsilon, and zeta-tubulins as well as FtsZ and CetZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts. A recent study found that CetZ proteins, formerly annotated FtsZ type 2, are not required for cell division, whereas FtsZ proteins play an important role. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276954 [Multi-domain]  Cd Length: 332  Bit Score: 73.60  E-value: 2.79e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 170 PENRLQIGQeltrGLGAGGNPEIGMNAAK-ESKEAIEEAL-------YGSDMVFVTAGMGGGTGTGGAPVIASVAKSM-- 239
Cdd:cd00286   46 PENIILIQK----YHGAGNNWAKGHSVAGeEYQEEILDAIrkeveecDELQGFFITHSLGGGTGSGLGPLLAERLKDEyp 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 240 GILTVGIVTTPFSFEGRR-RAVQAQEGIAALRDSVDTLIVIPNDKLLTAVSQST-PVTEAFNLADDILRQGVRGISDIIT 317
Cdd:cd00286  122 NRLVVTFSILPGPDEGVIvYPYNAALTLKTLTEHADCLLLVDNEALYDICPRPLhIDAPAYDHINELVAQRLGSLTEALR 201
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 318 IPGLVNVDF---ADVRAIMANAGSSLMGIGTATGKT-------RARDAALNAIQSPLLDIG----IERATGIVWNITGGS 383
Cdd:cd00286  202 FEGSLNVDLrelAENLVPLPRGHFLMLGYAPLDSATsatprslRVKELTRRAFLPANLLVGcdpdHGEAIAALLVIRGPP 281
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 255575683 384 DLTLFEVNAAAEVIYD-----LVDPTANLIFGAVIDPSLSGQVSITLIATG 429
Cdd:cd00286  282 DLSSKEVERAIARVKEtlghlFSWSPAGVKTGISPKPPAEGEVSVLALLNS 332
CetZ_tubulin-like cd02202
Cell-structure-related euryarchaeota tubulin/FtsZ homologs; CetZ proteins comprise a distinct ...
156-354 3.12e-10

Cell-structure-related euryarchaeota tubulin/FtsZ homologs; CetZ proteins comprise a distinct tubulin/FtsZ family. The crystal structures of CetZ contain the FtsZ/tubulin superfamily fold and its family members have mosaic of tubulin-like and FtsZ-like amino acid residues. However, a recent study found that CetZ proteins (formerly annotated FtsZ type 2) are not required for cell division, whereas FtsZ proteins play an important role. Instead, CetZ proteins are shown to be involved in controlling archaeal cell shape dynamics. The results from inactivation studies of CetZ proteins in Haloferax volcanii suggest that CetZ1 is essential for normal swimming motility and rod-cell development.


Pssm-ID: 276962 [Multi-domain]  Cd Length: 357  Bit Score: 61.49  E-value: 3.12e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 156 VNTDVQA-MKMSPVFPENRLQIGQELTRGLGAGGNPEIGMNAAKESKEAIEEAL-----YGSDMVFVTAGMGGGTGTGGA 229
Cdd:cd02202   37 VNTDRADlSGLDHIPEERRILIGDTETGGHGVGGDNELGAEVAEEDIDELLRALdtapfSEADAFLVVAGLGGGTGSGAA 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255575683 230 PVIASVAKSMGILTV-GIVTTPFSFEGRRRAVQAQEGIAALRDSVDTLIVIPNDKLLTAvsqSTPVTEAFNLADDILRQG 308
Cdd:cd02202  117 PVLAEELKERYDKPVyALGVLPAAEEGGRYALNAARSLRSLVELADAVILFDNDAWRRS---GESIAEAYDRINEEIAER 193
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 255575683 309 VR-----GISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARD 354
Cdd:cd02202  194 LGallaaGEVDAPKSVGESVLDASDIINTLSGGGVATIGYASEDLPTDGRS 244
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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