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Conserved domains on  [gi|2745580214|gb|XBW51310|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Platichthys flesus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009580)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
1-324 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177192  Cd Length: 324  Bit Score: 635.11  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   1 MISTLITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVA 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  81 PMLALTLALTLWAPMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNII 160
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 161 IFTGGFTLQTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLM 240
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 241 NALSATLFLGASHIPSIPELTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLALPIAFAGL 320
Cdd:MTH00134  241 NTLSAILFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320

                  ....
gi 2745580214 321 PPQL 324
Cdd:MTH00134  321 PPQL 324
 
Name Accession Description Interval E-value
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
1-324 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 635.11  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   1 MISTLITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVA 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  81 PMLALTLALTLWAPMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNII 160
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 161 IFTGGFTLQTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLM 240
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 241 NALSATLFLGASHIPSIPELTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLALPIAFAGL 320
Cdd:MTH00134  241 NTLSAILFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320

                  ....
gi 2745580214 321 PPQL 324
Cdd:MTH00134  321 PPQL 324
NADHdh pfam00146
NADH dehydrogenase;
13-309 1.53e-118

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 343.69  E-value: 1.53e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  13 LAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAPMLALTLALTLW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  93 APMPF--PYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFTGGFTLQT 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 171 FNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNALSATLFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2745580214 251 ASHIPsIPELTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIW 309
Cdd:pfam00146 243 GWLGP-FPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
2-309 7.05e-110

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 322.46  E-value: 7.05e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   2 ISTLITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAP 81
Cdd:COG1005     5 LAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAP 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  82 MLALTLALTLWAPMPF--PYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNI 159
Cdd:COG1005    85 ILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGV 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 160 IIFTGGFTLQTFNTAQEA-IWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNIL 238
Cdd:COG1005   165 VLLAGSLNLSEIVEAQAGgLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMF 244
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2745580214 239 LMNALSATLFLGASHIPSIPELTS-----INIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIW 309
Cdd:COG1005   245 LVSALATTLFLGGWLGPFPILPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
 
Name Accession Description Interval E-value
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
1-324 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 635.11  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   1 MISTLITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVA 80
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  81 PMLALTLALTLWAPMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNII 160
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 161 IFTGGFTLQTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLM 240
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 241 NALSATLFLGASHIPSIPELTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLALPIAFAGL 320
Cdd:MTH00134  241 NTLSAILFLGASHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGL 320

                  ....
gi 2745580214 321 PPQL 324
Cdd:MTH00134  321 PPQL 324
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
4-323 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 558.85  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   4 TLITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAPML 83
Cdd:MTH00071    3 TLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTM 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  84 ALTLALTLWAPMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFT 163
Cdd:MTH00071   83 ALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLT 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 164 GGFTLQTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNAL 243
Cdd:MTH00071  163 GGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTL 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 244 SATLFLGASHIPSIPELTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLALPIAFAGLPPQ 323
Cdd:MTH00071  243 STILFLGSTYNHLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
2-324 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 549.88  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   2 ISTLITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAP 81
Cdd:MTH00111    1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  82 MLALTLALTLWAPMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIII 161
Cdd:MTH00111   81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 162 FTGGFTLQTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMN 241
Cdd:MTH00111  161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 242 ALSATLFLGASHIPSIPELTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLALPIAFAGLP 321
Cdd:MTH00111  241 TLTTILFLNPSTLNLPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320

                  ...
gi 2745580214 322 PQL 324
Cdd:MTH00111  321 PQL 323
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
8-324 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 508.39  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   8 HIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAPMLALTL 87
Cdd:MTH00104    2 FMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  88 ALTLWAPMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFTGGFT 167
Cdd:MTH00104   82 ALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFT 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 168 LQTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNALSATL 247
Cdd:MTH00104  162 LSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTIL 241
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2745580214 248 FLGASHIPSIPELTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
Cdd:MTH00104  242 FLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
5-322 6.42e-159

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 446.28  E-value: 6.42e-159
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   5 LITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAPMLA 84
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  85 LTLALTLWAPMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFTG 164
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 165 GFTLQTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNALS 244
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2745580214 245 ATLFLGASHipsipelTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLALPIAFAGLPP 322
Cdd:MTH00218  241 VILFLGTSL-------TTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
4-322 6.52e-155

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 436.71  E-value: 6.52e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   4 TLITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAPML 83
Cdd:MTH00040    2 SVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  84 ALTLALTLWAPMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFT 163
Cdd:MTH00040   82 FLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFS 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 164 GGFTLQTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNAL 243
Cdd:MTH00040  162 GSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLL 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 244 SATLFLGA-SHIPSIPELTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLALPIAFAGLPP 322
Cdd:MTH00040  242 SVILFLGGgSPFNEIFPINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
5-319 1.10e-123

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 356.74  E-value: 1.10e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   5 LITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAPMLA 84
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  85 LTLALTLWAPMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFTG 164
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 165 GFTLQTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNALS 244
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2745580214 245 ATLFLGASHIPSipeltsinIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLALPIAFAG 319
Cdd:MTH00195  241 TILFLGGGGTII--------VALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
8-306 6.81e-119

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 344.55  E-value: 6.81e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   8 HIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAPMLALTL 87
Cdd:MTH00143    3 SLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLIL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  88 ALTLWAPMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFTGGFT 167
Cdd:MTH00143   83 ALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFS 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 168 LQTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNALSATL 247
Cdd:MTH00143  163 FIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVL 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2745580214 248 FLGASHIPSIpeLTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLAL 306
Cdd:MTH00143  243 FFGGSSVLFL--LGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSI 299
NADHdh pfam00146
NADH dehydrogenase;
13-309 1.53e-118

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 343.69  E-value: 1.53e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  13 LAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAPMLALTLALTLW 92
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  93 APMPF--PYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFTGGFTLQT 170
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 171 FNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNALSATLFLG 250
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2745580214 251 ASHIPsIPELTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIW 309
Cdd:pfam00146 243 GWLGP-FPLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
9-317 3.88e-116

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 337.51  E-value: 3.88e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   9 IINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAPMLALTLA 88
Cdd:MTH00193    5 LINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLS 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  89 LTLWAPMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFTGGFTL 168
Cdd:MTH00193   85 LLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNL 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 169 QTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNALSATLF 248
Cdd:MTH00193  165 LDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMF 244
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2745580214 249 LGAShipsipeLTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLALPIAF 317
Cdd:MTH00193  245 LGGD-------LLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
9-313 1.85e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 325.84  E-value: 1.85e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   9 IINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAPMLALTLA 88
Cdd:MTH00225    4 LLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILS 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  89 LTLWAPMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFTGGFTL 168
Cdd:MTH00225   84 LILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 169 QTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNALSATLF 248
Cdd:MTH00225  164 FDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILF 243
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2745580214 249 LGASHipsipELTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLAL 313
Cdd:MTH00225  244 FGGFF-----VTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
2-309 7.05e-110

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 322.46  E-value: 7.05e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   2 ISTLITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAP 81
Cdd:COG1005     5 LAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAP 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  82 MLALTLALTLWAPMPF--PYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNI 159
Cdd:COG1005    85 ILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGV 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 160 IIFTGGFTLQTFNTAQEA-IWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNIL 238
Cdd:COG1005   165 VLLAGSLNLSEIVEAQAGgLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMF 244
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2745580214 239 LMNALSATLFLGASHIPSIPELTS-----INIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIW 309
Cdd:COG1005   245 LVSALATTLFLGGWLGPFPILPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
9-322 1.85e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 321.29  E-value: 1.85e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   9 IINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAPMLALTLA 88
Cdd:MTH00054    5 IIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLA 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  89 LTLWAPMPFPYPVI--DLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFTGGF 166
Cdd:MTH00054   85 FIAWGVIPYGEGVVlsDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSL 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 167 TLQTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNALSAT 246
Cdd:MTH00054  165 NLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVI 244
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2745580214 247 LFLGASHIPSIPELTSINIM---TKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLALPIAFAGLPP 322
Cdd:MTH00054  245 LFLGGWLVISGPTSYFSNFVwfgIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
1-322 2.06e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 316.29  E-value: 2.06e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   1 MISTLITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVA 80
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  81 PMLALTLALTLWAPMPFPYPVI--DLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLN 158
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYERGVLisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 159 IIIFTGGFTLQTFNTAQEA-IWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNI 237
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNNgIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 238 LLMNALSATLFLGaSHIPSIPELTSINIM--TKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIWHLALPI 315
Cdd:MTH00216  241 ILMSCLTTILFLG-GWLSPIKYFKGGAGWfgLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLF 319

                  ....*..
gi 2745580214 316 AFAGLPP 322
Cdd:MTH00216  320 GFNGPPP 326
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-309 5.81e-105

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 309.82  E-value: 5.81e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   1 MISTLITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVA 80
Cdd:PRK06076    5 GPDLLLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLA 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  81 PMLALTLALTLWAPMPF--PYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLN 158
Cdd:PRK06076   85 PVIAFIPAFLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLA 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 159 IIIFTGGFTLQTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNIL 238
Cdd:PRK06076  165 VVLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMI 244
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2745580214 239 LMNALSATLFLGASHIPSIPE---LTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIW 309
Cdd:PRK06076  245 LVSALITTLFLGGWLPPFPLGggiPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
2-322 1.66e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 281.52  E-value: 1.66e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   2 ISTLITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAP 81
Cdd:MTH00029    3 IYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAP 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  82 MLALTLALTLWAPMPFPYPVI--DLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNI 159
Cdd:MTH00029   83 IISFTLAILAWAIVTMDQGVFlsDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISV 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 160 IIFTGGFTLQTFNTAQEAIWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILL 239
Cdd:MTH00029  163 ILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIIL 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 240 MNALSATLFLGA-----SHIPSIPEL-----------TSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLT 303
Cdd:MTH00029  243 MSCMMTIFFLGGwlsplDGIPTPPEAfsifeqiasskSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLS 322
                         330
                  ....*....|....*....
gi 2745580214 304 LALVIWHLALPIAFAGLPP 322
Cdd:MTH00029  323 LGLVILTAGILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
6-317 6.33e-93

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 278.59  E-value: 6.33e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   6 ITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAPMLAL 85
Cdd:MTH00010    3 ISFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  86 TLALTLWAPMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFTGG 165
Cdd:MTH00010   83 ILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQT 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 166 FTLQTFNTAQEAiWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNALSA 245
Cdd:MTH00010  163 FSFSKIIMSQYS-WILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTS 241
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2745580214 246 TLFLgaSHIPSIpELTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIwhLALPIAF 317
Cdd:MTH00010  242 VFFT--SFIPSI-FISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM--ISIPIMF 308
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
13-304 1.21e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 205.52  E-value: 1.21e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  13 LAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAPMLALTLALTLW 92
Cdd:MTH00090    3 LLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEW 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  93 APMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFTGGFTL-QTF 171
Cdd:MTH00090   83 FVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFvSSF 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 172 NTAQEAIWLvvpawplaaMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNALSATLFLGA 251
Cdd:MTH00090  163 SLSLFVIYL---------PFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKF 233
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2745580214 252 SHIPSIpeltsinimtkaaLLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTL 304
Cdd:MTH00090  234 SFLMLF-------------LIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
13-304 2.93e-48

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 163.56  E-value: 2.93e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  13 LAFIVpVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAPMLALTLALTLW 92
Cdd:MTH00058    9 EGLLI-ILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYC 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  93 APMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFTGGFTLQTFN 172
Cdd:MTH00058   88 FIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFY 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 173 TAQEAIWLVVPawPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLMNALSATLFLGAS 252
Cdd:MTH00058  168 YSGWLSVLLFP--LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGG 245
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2745580214 253 hipsipeltSINIMTKAALLsvVFLWVRASYPRFRYDQLMHLIWKNFLPLTL 304
Cdd:MTH00058  246 ---------FVSIMLLFHLL--FFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
2-304 6.83e-48

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 164.35  E-value: 6.83e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   2 ISTLITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTASPVLFLVAP 81
Cdd:CHL00032   23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  82 MLALTLALTLWAPMPFPYPVI--DLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNI 159
Cdd:CHL00032  103 SIAVISILLSYLVIPFGYHLVlaDLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 160 IIFTGGFTLQTFNTAQEA--IWlvvpAWPLaamW---------YISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFAL 228
Cdd:CHL00032  183 SLLSNSLSTVDIVEAQSKygFW----GWNL---WrqpigfivfLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGL 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 229 FFLAEYSNiLLMNALSAT-LFLGASHIP----SIPELTSIN--------------IMTKAALLSVVFLWVRASYPRFRYD 289
Cdd:CHL00032  256 FYVASYLN-LLVSSLFVTvLYLGGWNLSipyiFIPELFEINktggvfgttigifiTLAKTYLFLFISITTRWTLPRLRMD 334
                         330
                  ....*....|....*
gi 2745580214 290 QLMHLIWKNFLPLTL 304
Cdd:CHL00032  335 QLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-309 5.77e-29

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 112.97  E-value: 5.77e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214   6 ITHIINPLAFIVPVLLAVAFLTLLERKVLGYMQLRKGPnivgpyGLLQPIADGLKLFIKEPVRPSTASPvLFLVAPMLAL 85
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASW-LFRAAPYVAL 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214  86 TLALTLWA--PMPFPYPVIDLNLGILFILALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLNIIIFT 163
Cdd:COG0650    74 AAMLLAALlvPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2745580214 164 GGFTLQTFNTAQEA---IWLVVPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYSNILLM 240
Cdd:COG0650   154 GSTSLSDIVAYQAAhgpLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2745580214 241 NALSATLFLGAShIPSIPELTSINIMTKAALLSVVFLWVRASYPRFRYDQLMHLIWKNFLPLTLALVIW 309
Cdd:COG0650   234 LSLFVNLFLPWG-IALTLLLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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