|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-355 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 713.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 1 RKSHPLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHA 80
Cdd:MTH00100 5 RKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 81 NGASLFFICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWI 160
Cdd:MTH00100 85 NGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 161 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVL 240
Cdd:MTH00100 165 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 241 FFPDKLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTL 320
Cdd:MTH00100 245 FSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCL 324
|
330 340 350
....*....|....*....|....*....|....*
gi 2741723315 321 FWIPVSDLLLLTWIGGQPVEPPFIIIGQVASILYF 355
Cdd:MTH00100 325 FWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYF 359
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
5-355 |
3.45e-127 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 370.27 E-value: 3.45e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 5 PLMKIVNHaFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGAS 84
Cdd:COG1290 19 PLASLVRE-HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 85 LFFICLYIHIGRGIYYGSYLYTE--TWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWIWG 162
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 163 GFSVDKATLTRFFAFH-FILPFIITALAMVHLLFLHETGSNNPLGIPSDCGK----VPFHPYYTTKDFLGAIMLLMLFLT 237
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 238 LVLFFPDklGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVVALVLSILVLALLPYLHTSNQRSLMFRP 315
Cdd:COG1290 258 LAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2741723315 316 LSQTLFWIPVSDLLLLTWIGGQPvePPFIIIGQVASILYF 355
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYF 373
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
5-202 |
7.08e-96 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 283.49 E-value: 7.08e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 5 PLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGAS 84
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 85 LFFICLYIHIGRGIYYGSY--LYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWIWG 162
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2741723315 163 GFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSN 202
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
14-200 |
1.27e-88 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 264.63 E-value: 1.27e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 14 FIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGASLFFICLYIH 93
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 94 IGRGIYYGSYLYT--ETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWIWGGFSVDKATL 171
Cdd:pfam00033 81 IFRGLYYGGFSYPreLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2741723315 172 TRFFAFHFILPFIITALAMVHLLFLHETG 200
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
254-323 |
8.46e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 57.11 E-value: 8.46e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2741723315 254 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMF-RPLSQTLFWI 323
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVFLF 135
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-355 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 713.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 1 RKSHPLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHA 80
Cdd:MTH00100 5 RKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 81 NGASLFFICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWI 160
Cdd:MTH00100 85 NGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 161 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVL 240
Cdd:MTH00100 165 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 241 FFPDKLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTL 320
Cdd:MTH00100 245 FSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCL 324
|
330 340 350
....*....|....*....|....*....|....*
gi 2741723315 321 FWIPVSDLLLLTWIGGQPVEPPFIIIGQVASILYF 355
Cdd:MTH00100 325 FWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYF 359
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-355 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 665.83 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 1 RKSHPLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHA 80
Cdd:MTH00119 6 RKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 81 NGASLFFICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWI 160
Cdd:MTH00119 86 NGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 161 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVL 240
Cdd:MTH00119 166 WGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLAL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 241 FFPDKLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTL 320
Cdd:MTH00119 246 FSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLL 325
|
330 340 350
....*....|....*....|....*....|....*
gi 2741723315 321 FWIPVSDLLLLTWIGGQPVEPPFIIIGQVASILYF 355
Cdd:MTH00119 326 FWTLVANLLILTWIGSQPVEHPFIIIGQLASILYF 360
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-355 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 651.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 1 RKSHPLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHA 80
Cdd:MTH00131 5 RKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 81 NGASLFFICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWI 160
Cdd:MTH00131 85 NGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 161 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVL 240
Cdd:MTH00131 165 WGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLAL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 241 FFPDKLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTL 320
Cdd:MTH00131 245 FSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFL 324
|
330 340 350
....*....|....*....|....*....|....*
gi 2741723315 321 FWIPVSDLLLLTWIGGQPVEPPFIIIGQVASILYF 355
Cdd:MTH00131 325 FWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYF 359
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-355 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 632.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 1 RKSHPLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHA 80
Cdd:MTH00074 6 RKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 81 NGASLFFICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWI 160
Cdd:MTH00074 86 NGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 161 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVL 240
Cdd:MTH00074 166 WGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 241 FFPDKLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTL 320
Cdd:MTH00074 246 FSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQIL 325
|
330 340 350
....*....|....*....|....*....|....*
gi 2741723315 321 FWIPVSDLLLLTWIGGQPVEPPFIIIGQVASILYF 355
Cdd:MTH00074 326 FWLLVANTLILTWIGGQPVEDPFIEIGQAASILYF 360
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-355 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 628.10 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 1 RKSHPLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHA 80
Cdd:MTH00191 2 RKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 81 NGASLFFICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWI 160
Cdd:MTH00191 82 NGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 161 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVL 240
Cdd:MTH00191 162 WGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 241 FFPDKLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTL 320
Cdd:MTH00191 242 FSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVV 321
|
330 340 350
....*....|....*....|....*....|....*
gi 2741723315 321 FWIPVSDLLLLTWIGGQPVEPPFIIIGQVASILYF 355
Cdd:MTH00191 322 FWLWVANFILLTWLGGQPVEDPFILLGQISSFLYF 356
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
7-355 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 612.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 7 MKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGASLF 86
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 87 FICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWIWGGFSV 166
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 167 DKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVLFFPDKL 246
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 247 GDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTLFWIPVS 326
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340
....*....|....*....|....*....
gi 2741723315 327 DLLLLTWIGGQPVEPPFIIIGQVASILYF 355
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYF 349
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-355 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 593.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 1 RKSHPLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHA 80
Cdd:MTH00145 6 RKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 81 NGASLFFICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWI 160
Cdd:MTH00145 86 NGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 161 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVL 240
Cdd:MTH00145 166 WGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 241 FFPDKLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTL 320
Cdd:MTH00145 246 FFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVL 325
|
330 340 350
....*....|....*....|....*....|....*
gi 2741723315 321 FWIPVSDLLLLTWIGGQPVEPPFIIIGQVASILYF 355
Cdd:MTH00145 326 FWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYF 360
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-355 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 587.83 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 1 RKSHPLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHA 80
Cdd:MTH00034 5 RKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 81 NGASLFFICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWI 160
Cdd:MTH00034 85 NGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 161 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVL 240
Cdd:MTH00034 165 WGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLAL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 241 FFPDKLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTL 320
Cdd:MTH00034 245 LFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIA 324
|
330 340 350
....*....|....*....|....*....|....*
gi 2741723315 321 FWIPVSDLLLLTWIGGQPVEPPFIIIGQVASILYF 355
Cdd:MTH00034 325 FWLLIATFFILTWIGSQPVEYPFILLGQVASVLYF 359
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-355 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 566.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 1 RKSHPLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHA 80
Cdd:MTH00016 6 RKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 81 NGASLFFICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWI 160
Cdd:MTH00016 86 NGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 161 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVL 240
Cdd:MTH00016 166 WGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 241 FFPDKLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTL 320
Cdd:MTH00016 246 LWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQIL 325
|
330 340 350
....*....|....*....|....*....|....*
gi 2741723315 321 FWIPVSDLLLLTWIGGQPVEPPFIIIGQVASILYF 355
Cdd:MTH00016 326 FWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYF 360
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-355 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 506.93 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 1 RKSHPLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHA 80
Cdd:MTH00022 4 RKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 81 NGASLFFICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWI 160
Cdd:MTH00022 84 NGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWV 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 161 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVL 240
Cdd:MTH00022 164 WGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVY 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 241 FFPDKLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTL 320
Cdd:MTH00022 244 FAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMA 323
|
330 340 350
....*....|....*....|....*....|....*
gi 2741723315 321 FWIPVSDLLLLTWIGGQPVEPPFIIIGQVASILYF 355
Cdd:MTH00022 324 FWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYF 358
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-355 |
1.21e-178 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 500.39 E-value: 1.21e-178
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 1 RKSHPLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHA 80
Cdd:MTH00053 6 RKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 81 NGASLFFICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWI 160
Cdd:MTH00053 86 NGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 161 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVL 240
Cdd:MTH00053 166 WGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 241 FFPDKLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTL 320
Cdd:MTH00053 246 LFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKIL 325
|
330 340 350
....*....|....*....|....*....|....*
gi 2741723315 321 FWIPVSDLLLLTWIGGQPVEPPFIIIGQVASILYF 355
Cdd:MTH00053 326 FWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYF 360
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-355 |
8.37e-177 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 495.60 E-value: 8.37e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 1 RKSHPLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHA 80
Cdd:MTH00224 6 RTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 81 NGASLFFICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWI 160
Cdd:MTH00224 86 NGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWI 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 161 WGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVL 240
Cdd:MTH00224 166 WGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 241 FFPDKLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTL 320
Cdd:MTH00224 246 FEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLL 325
|
330 340 350
....*....|....*....|....*....|....*
gi 2741723315 321 FWIPVSDLLLLTWIGGQPVEPPFIIIGQVASILYF 355
Cdd:MTH00224 326 FWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYF 360
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
15-355 |
6.98e-132 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 381.98 E-value: 6.98e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 15 IDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGASLFFICLYIHI 94
Cdd:MTH00033 16 IDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 95 GRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWIWGGFSVDKATLTRF 174
Cdd:MTH00033 96 GRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 175 FAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVLF--FPDKLGDPDNY 252
Cdd:MTH00033 176 FSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEprIETLLQDPENF 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 253 MPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTLFWIPVSDLLLLT 332
Cdd:MTH00033 256 IQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIILT 335
|
330 340
....*....|....*....|....
gi 2741723315 333 WIGGQPV-EPPFIIIGQVASILYF 355
Cdd:MTH00033 336 WIGSAPAgADPYVLIGRIATIFYF 359
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
5-355 |
3.45e-127 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 370.27 E-value: 3.45e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 5 PLMKIVNHaFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGAS 84
Cdd:COG1290 19 PLASLVRE-HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 85 LFFICLYIHIGRGIYYGSYLYTE--TWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWIWG 162
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 163 GFSVDKATLTRFFAFH-FILPFIITALAMVHLLFLHETGSNNPLGIPSDCGK----VPFHPYYTTKDFLGAIMLLMLFLT 237
Cdd:COG1290 178 GEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 238 LVLFFPDklGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVVALVLSILVLALLPYLHTSNQRSLMFRP 315
Cdd:COG1290 258 LAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2741723315 316 LSQTLFWIPVSDLLLLTWIGGQPvePPFIIIGQVASILYF 355
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYF 373
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
8-355 |
5.95e-122 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 355.40 E-value: 5.95e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 8 KIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGASLFF 87
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 88 ICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWIWGGFSVD 167
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 168 KATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGaIMLLMLFLTLVLFFPDKLG 247
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYN-IIFWLVFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 248 DPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQrslMFRPLSQTLFWIPVSD 327
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVV 316
|
330 340
....*....|....*....|....*...
gi 2741723315 328 LLLLTWIGGQPVEPPFIIIGQVASILYF 355
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYF 344
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
5-202 |
7.08e-96 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 283.49 E-value: 7.08e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 5 PLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGAS 84
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 85 LFFICLYIHIGRGIYYGSY--LYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWIWG 162
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2741723315 163 GFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSN 202
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
6-353 |
1.86e-92 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 280.33 E-value: 1.86e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 6 LMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGASL 85
Cdd:MTH00046 1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 86 FFICLYIHIGRGIYYGSYLYTETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWIWGGFS 165
Cdd:MTH00046 81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 166 VDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPLGIP---SDCgkVPFHPYYTTKDFLGAIMLLMLFLTLVLFF 242
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSngySDV--VYFHSYFTVKDLFLFMVVCSLLVFWLFVS 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 243 PDKLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVaLVLSILVLALLPylhtSNQRSLMFRPLSQTLFW 322
Cdd:MTH00046 239 PDLVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLV-LVLSFLFFLWVP----TFNGSSVYSVWRQVNFW 313
|
330 340 350
....*....|....*....|....*....|.
gi 2741723315 323 IPVSDLLLLTWIGGQPVEPPFIIIGQVASIL 353
Cdd:MTH00046 314 LIVSLFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
14-200 |
1.27e-88 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 264.63 E-value: 1.27e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 14 FIDLPTPPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGASLFFICLYIH 93
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 94 IGRGIYYGSYLYT--ETWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWIWGGFSVDKATL 171
Cdd:pfam00033 81 IFRGLYYGGFSYPreLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2741723315 172 TRFFAFHFILPFIITALAMVHLLFLHETG 200
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
203-350 |
1.73e-52 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 170.52 E-value: 1.73e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 203 NPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVLFFPDKLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPN 282
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2741723315 283 KLGGVVALVLSILVLALLPYLHTSNQRSlMFRPLSQTLFWIPVSDLLLLTWIGGQPVEPPFIIIGQVA 350
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
254-354 |
6.15e-48 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 157.26 E-value: 6.15e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 254 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMFRPLSQTLFWIPVSDLLLLTW 333
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 2741723315 334 IGGQPVEPPFIIIGQVASILY 354
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
84-249 |
3.16e-39 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 136.99 E-value: 3.16e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 84 SLFFICLYIHIGRGIYYGSYLYTE--TWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWIW 161
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 162 GGFSVDKATLTRFFAFHF-ILPFIITALAMVHLLFLHETGSNNPLGIPSDCGKVPFHPYYTTKDFLGAIMLLMLFLTLVL 240
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 2741723315 241 FFPDKLGDP 249
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
29-205 |
1.04e-38 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 137.54 E-value: 1.04e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 29 FGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGASLFFICLYIHIGRGIYYGSYLYTE- 107
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 108 -TWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWIWGGFSVDKATLTRFFAFH-FILPFII 185
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 2741723315 186 TALAMVHLLFLHETGSNNPL 205
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
20-205 |
2.79e-33 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 122.91 E-value: 2.79e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 20 PPNISGWWNFGSLLGLCLILQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYMHANGASLFFICLYIHIGRGIY 99
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2741723315 100 YGSYLYTE--TWNIGILLLLLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDLVEWIWGGFSVDKATLTRFFAF 177
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 2741723315 178 H-FILPFIITALAMVHLLFLHETGSNNPL 205
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
254-321 |
3.96e-12 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 63.66 E-value: 3.96e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2741723315 254 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMF-RPLSQTLF 321
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFrRPVATAVF 134
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
254-323 |
4.48e-11 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 60.40 E-value: 4.48e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2741723315 254 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMF-RPLSQTLFWI 323
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLENVNKFQNPFrRPVATTVFLI 135
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
254-323 |
8.46e-10 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 57.11 E-value: 8.46e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2741723315 254 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVVALVLSILVLALLPYLHTSNQRSLMF-RPLSQTLFWI 323
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVFLF 135
|
|
| |
