|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-462 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 677.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 1 MLKIVLPTMMLLPTALLSPLKFMWANTTMHSLLIAALSLQWLTPSYYPYKNLTQWTGADQTSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 81 QNHLHHEPPTRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 161 LVAVLFLQSQTGTLHLPTLKLTPysllPTPTNHWSTLLLNTALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTH----PTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 241 KLGGYGIMRLTCLTPPPPNNLlHYSFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMIL 320
Cdd:MTH00124 237 KLGGYGIIRITLLLPPLSNTL-HYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 321 MISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFNWSSPTILL 400
Cdd:MTH00124 316 MIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIIL 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2725689047 401 TGTATLLTASYTLFMLTTTQRGTPSPYITTLQNSTTREHLLMALHLLPMLLLILKPELISGP 462
Cdd:MTH00124 396 TGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-463 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 544.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 1 MLKIVLPTMMLLPTALLSPLKFMWANTTMHSLLIAALSLQWLTPSYYPYKNLTQWTGADQTSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 81 QNHLHHEPPTRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 161 LVAVLFLQSQTGTLHLPTLKLTPYSLLPTptnhWSTLLLNTALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNS----WSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 241 KLGGYGIMRLTCLTPPPPNNLLhYSFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMIL 320
Cdd:MTH00110 237 KLGGYGMMRITIILNPLTEFMA-YPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATAL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 321 MISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFNWSSPTILL 400
Cdd:MTH00110 316 MIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIIL 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2725689047 401 TGTATLLTASYTLFMLTTTQRGTPSPYITTLQNSTTREHLLMALHLLPMLLLILKPELISGPL 463
Cdd:MTH00110 396 MGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPT 458
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-461 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 541.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 1 MLKIVLPTMMLLPTALLSPLKFMWANTTMHSLLIAALSLQWLTPSYYPYKNLTQWTGADQTSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 81 QNHLHHEPPTRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 161 LVAVLFLQSQTGTLHLPTLKLTPYSLLPTPTNhwstLLLNTALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTN----KIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 241 KLGGYGIMRLTCLTPPPPNNLLhYSFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMIL 320
Cdd:MTH00068 237 KLGGYGILRISILLTPLSKELS-YPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIIL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 321 MISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFNWSSPTILL 400
Cdd:MTH00068 316 MISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILI 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2725689047 401 TGTATLLTASYTLFMLTTTQRGTPSPYITTLQNSTTREHLLMALHLLPMLLLILKPELISG 461
Cdd:MTH00068 396 TGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-461 |
1.44e-156 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 451.72 E-value: 1.44e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 1 MLKIVLPTMMLLPTALLSPLKFMWANTTMHSLLIAALSLQWLT-PSYYPYKNLTQWTGADQTSSPLLVLSCWLLPLMILA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKnLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 80 SQNHLHHEPPTRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 160 LLVAVLFLQSQTGTLHLPTLKLTPysllPTPTNHWSTLLLNTALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALL 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQ----PLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 240 LKLGGYGIMRLTCLTPPPPNNLLhYSFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMI 319
Cdd:MTH00127 237 LKLGGYGMMRMMVMLDPLTKELS-YPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 320 LMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFNWSSPTIL 399
Cdd:MTH00127 316 LMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLA 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2725689047 400 LTGTATLLTASYTLFMLTTTQRGTPSPYITTLQNSTTREHLLMALHLLPMLLLILKPELISG 461
Cdd:MTH00127 396 LTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-459 |
1.30e-147 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 428.59 E-value: 1.30e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 3 KIVLPTMMLLPTALLSPLKFMWANTTMHSLLIAALSLQWLTPSY-YPYKNLTQWTGADQTSSPLLVLSCWLLPLMILASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSeVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 82 NHLHHEPPTRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 162 VAVLFLQSQTGTLHLPTLKLTPYSLlptptnhWSTLLLNTALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLK 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLTT-------WNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 242 LGGYGIMRLtCLTPPPPNNLLHYSFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILM 321
Cdd:MTH00206 234 LGGYGMMRI-ILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLM 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 322 ISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFNWSSPTILLT 401
Cdd:MTH00206 313 IAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLL 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2725689047 402 GTATLLTASYTLFMLTTTQRGTPSPYITTLQNSTTREHLLMALHLLPMLLLILKPELI 459
Cdd:MTH00206 393 GLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-438 |
6.41e-130 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 383.94 E-value: 6.41e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 1 MLKIVLPTMMLLPTALLSPLKFMWANTTMHSLLIAALSLQWLTPSYY-PYKNLTQWTGADQTSSPLLVLSCWLLPLMILA 79
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSsSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 80 SQNHLHHEPPTRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLP 159
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 160 LLVAVLFLQSQTGTLHLPTLKLTPYSLLPTPTNHWSTLLLntalLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALL 239
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFC----ILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAIL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 240 LKLGGYGIMRLTCLTPPPPNNLLHYSFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMI 319
Cdd:MTH00044 237 LKLGGYGLIRLINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 320 LMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFNWSSPTIL 399
Cdd:MTH00044 317 LMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFP 396
|
410 420 430
....*....|....*....|....*....|....*....
gi 2725689047 400 LTGTATLLTASYTLFMLTTTQRGTPSPYITTLQNSTTRE 438
Cdd:MTH00044 397 IIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSRE 435
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-438 |
6.75e-110 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 332.12 E-value: 6.75e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 1 MLKIVLPTMMLLPtalLSPLKFMWaNTTMHSLLIAALSLQWLTPSYYPYKNLTQWTGADQTSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIP---LCFLKNSW-WLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 81 QNHLHHEPPTRKRIFTATLIAVqpFIISAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00163 77 ESVYKKNNYSNLFLFLILFLLI--FLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 161 LVAVLFLQSQTGTLHLPTLKLtpysllptptNHWSTLLLNTALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF----------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLL 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 241 KLGGYGIMRLTCLTPPPpNNLLHYSFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMIL 320
Cdd:MTH00163 225 KLGGYGLLRVMSFFSKL-GLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLM 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 321 MISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFNWSSPTILL 400
Cdd:MTH00163 304 MIGHGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIF 383
|
410 420 430
....*....|....*....|....*....|....*...
gi 2725689047 401 TGTATLLTASYTLFMLTTTQRGTPSPYITTLQNSTTRE 438
Cdd:MTH00163 384 LMLLSFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVRE 421
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-460 |
3.78e-102 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 312.45 E-value: 3.78e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 1 MLKIVLPTMMLLPTALLSPlKFMWANTTMHSLLIAALSLQWLTPSYYPYKNLTQWTGADQTSSPLLVLSCWLLPLMILAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 81 QNHLHHEppTRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPL 160
Cdd:MTH00014 80 FKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 161 LVAVLFLQSQTGTLHLPTLKLTPYSLLPTptNHWSTLLLntallMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLL 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSIYLM--NLWWLITI-----LAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 241 KLGGYGIMRLTCLTPPPPNNLLHYsFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMIL 320
Cdd:MTH00014 231 KLGGYGLLRMSSLFMHINKSLSAP-FSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAM 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 321 MISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFNWSSPTILL 400
Cdd:MTH00014 310 MIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAIL 389
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 401 TGTATLLTASYTLFMLTTTQRGTPSPYITTLQNSTTREHLLMALHLLPMLLLILKPELIS 460
Cdd:MTH00014 390 LAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
37-438 |
5.23e-98 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 300.60 E-value: 5.23e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 37 LSLQWLTPSYYPYKNLTQWTGADQTSSPLLVLSCWLLPLMILASQNHLHHEPPTRKRIFTATLIAVqpFIISAFSTTELM 116
Cdd:MTH00150 1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCL--ILVLAFSVSSLL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 117 MFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTPYSLLptptnhwST 196
Cdd:MTH00150 79 MFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLS-------SM 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 197 LLLNTALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTppppnNLLHYSF----ITLALW 272
Cdd:MTH00150 152 GLWGLLVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVF-----SLSSSSFsiflISLSLW 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 273 GALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQG 352
Cdd:MTH00150 227 GGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKG 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 353 LQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFNWSSPTILLTGTATLLTASYTLFMLTTTQRGTPSPYITTLQ 432
Cdd:MTH00150 307 MLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFN 386
|
....*.
gi 2725689047 433 NSTTRE 438
Cdd:MTH00150 387 ELKSSE 392
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
8-438 |
1.88e-96 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 297.66 E-value: 1.88e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 8 TMMLLPTALLSPLKFMWANTTMHSLLIAALSLQWLTPSYYPYKNLTQWTGADQTSSPLLVLSCWLLPLMILASQNHLhhE 87
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF--K 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 88 PPTRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFL 167
Cdd:MTH00205 83 SNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 168 QSQTGTLHLptlkltpySLLPTPTNHWSTL-LLNTALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYG 246
Cdd:MTH00205 163 NSLNFSLSM--------FFNFPLNFSDFYLfLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 247 IMRLTCLTppppnNLLHYS----FITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMI 322
Cdd:MTH00205 235 LIRITSML-----YKLNSNfselFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMV 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 323 SHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFNWSSPTILLTG 402
Cdd:MTH00205 310 AHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLS 389
|
410 420 430
....*....|....*....|....*....|....*.
gi 2725689047 403 TATLLTASYTLFMLTTTQRGTPSPYITTLQNSTTRE 438
Cdd:MTH00205 390 LISFLSGAYSLYLYSQSQHGKVSSQISSFLAISERE 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-398 |
5.15e-73 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 231.82 E-value: 5.15e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 113 TELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTpyslLPTPTN 192
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKA----LTGGLN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 193 HWSTLLLNTALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPpNNLLHYSFITLALW 272
Cdd:pfam00361 78 SSGLLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPS-SPFIQQILLILAII 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 273 GALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLA-NTNYERTHSRTLLLAQ 351
Cdd:pfam00361 157 SMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYG 236
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2725689047 352 GLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFNWSSPTI 398
Cdd:pfam00361 237 GLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFL 283
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
57-391 |
7.68e-64 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 214.17 E-value: 7.68e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 57 GADQTSSPLLVLSCWLLPLMILASQNHLHHepptRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRW 136
Cdd:COG1008 79 GVDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 137 GNqPERLSAGIYLLFYTLISSLPLLVAVLFL--QSQTGTLHLPTLKLTPYSLlptptnHWSTLLLnTALLMAFMVKAPLY 214
Cdd:COG1008 155 GG-ERRIYAAIKFFLYTLAGSLLMLVAILALyfLAGALTFDIAELAAAPLPL------TAQLLLF-LAFFIAFAVKVPMF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 215 GLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLtCLtPPPPNNLLHYS--FITLALWGALMTSSICLRQVDLKSLIA 292
Cdd:COG1008 227 PFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRF-AL-PLFPEASAYFAplLAALGVIGIIYGALVALAQTDLKRLIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 293 YSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNM 372
Cdd:COG1008 305 YSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
330
....*....|....*....
gi 2725689047 373 ALPPTTNLMAELSIMVALF 391
Cdd:COG1008 385 GLPGTSGFVGEFLVLLGAF 403
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-391 |
1.41e-58 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 199.78 E-value: 1.41e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 57 GADQTSSPLLVLSCWLLPLMILASQNHLHHepptRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRW 136
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 137 GNqPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTG-TLHLPTLKLTPYSLlptptnhWSTLLLNTALLMAFMVKAPLYG 215
Cdd:TIGR01972 150 GG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgTFDLLELLNLPLPF-------GVQTWLFLAFFIAFAVKVPLFP 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 216 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYSFITLALWGALMTSSICLRQVDLKSLIAYSS 295
Cdd:TIGR01972 222 LHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSS 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 296 VSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALP 375
Cdd:TIGR01972 302 ISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
330
....*....|....*.
gi 2725689047 376 PTTNLMAELSIMVALF 391
Cdd:TIGR01972 382 GTSGFVGEFLILLGSF 397
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
57-391 |
5.10e-57 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 196.19 E-value: 5.10e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 57 GADQTSSPLLVLSCWLLPLMILASQnhlhHEPPTRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRW 136
Cdd:PRK05846 79 GVDGISLLLVVLTALLTPLAVLASW----EEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 137 GnQPERLSAGIYLLFYTLISSLPLLVAVLFL----QSQTGTLHLPTLKLTPyslLPTPTNHWstLLLntALLMAFMVKAP 212
Cdd:PRK05846 155 G-GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADLLNLP---LPPGVQYW--LFL--AFFIAFAVKMP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 213 LYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLtCLtPPPPN--NLLHYSFITLALWGALMTSSICLRQVDLKSL 290
Cdd:PRK05846 227 MFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRF-SL-PLFPDasHEFAPIIITLGVIAIIYGALVALAQTDIKKL 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 291 IAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLT 370
Cdd:PRK05846 305 IAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMA 384
|
330 340
....*....|....*....|.
gi 2725689047 371 NMALPPTTNLMAELSIMVALF 391
Cdd:PRK05846 385 SLGLPGTSGFVGEFLILLGSF 405
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
59-428 |
6.67e-55 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 190.27 E-value: 6.67e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 59 DQTSSPLLVLSCWLLPLMILASQNHLHHepptRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRWGN 138
Cdd:MTH00204 82 DGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGS 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 139 QPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTPyslLPTPTNHWstllLNTALLMAFMVKAPLYGLHL 218
Cdd:MTH00204 158 REEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIK---LPLSIQKW----LLVGFFLSLAVKIPQIPFHI 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 219 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYSFITLAL----WGALMTSsiclRQVDLKSLIAYS 294
Cdd:MTH00204 231 WLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSViaviYGSLTTC----RQVDFKRLIAYS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 295 SVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMAL 374
Cdd:MTH00204 307 SVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGF 386
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2725689047 375 PPTTNLMAELSIMVALFNWSSPTILLTGTATLLTASYTLFMLTTTQRGTPSPYI 428
Cdd:MTH00204 387 PLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYL 440
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
59-438 |
4.63e-51 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 180.50 E-value: 4.63e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 59 DQTSSPLLVLSCWLLPLMILASQNHLHHepptRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRWGN 138
Cdd:MTH00226 101 DGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGS 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 139 QPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTPYsLLPTPTNHWSTLllntALLMAFMVKAPLYGLHL 218
Cdd:MTH00226 177 REEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSH-VVSEQTQKWIFL----GIFLAMAVKIPIFPFHI 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 219 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYSFITLALWGALMTSSICLRQVDLKSLIAYSSVSH 298
Cdd:MTH00226 252 WLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAH 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 299 MGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTT 378
Cdd:MTH00226 332 MGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSG 411
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 379 NLMAELSIMVALFNWSSPTILLTGTATLLTASYTLFMLTTTQRGTPSPYITTLQNSTTRE 438
Cdd:MTH00226 412 NFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRRE 471
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
57-438 |
1.50e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 173.31 E-value: 1.50e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 57 GADQTSSPLLVLSCWLLPLMILASQNHLHHepptRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRW 136
Cdd:MTH00217 77 AVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIW 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 137 GNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLkltpYSLLptpTNHWSTLLLNTALLMAFMVKAPLYGL 216
Cdd:MTH00217 153 GSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQAL----CCLK---IEKELQYFIFLGFFLSLAIKIPKIPF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 217 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYSFITLALWGALMTSSICLRQVDLKSLIAYSSV 296
Cdd:MTH00217 226 HIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 297 SHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPP 376
Cdd:MTH00217 306 AHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPL 385
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2725689047 377 TTNLMAELSIMVALFNWSSPTILLTGTATLLTASYTLFMLTTTQRGTPSPYITTLQNSTTRE 438
Cdd:MTH00217 386 SCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNRRE 447
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
105-417 |
2.01e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 157.38 E-value: 2.01e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 105 FIISAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVavlflqsqtgtLHLPTLKLTPY 184
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLF-----------VYLKNFFFFSL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 185 SLLptptNHWSTLLLNTALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTppppNNLLHY 264
Cdd:MTH00094 143 CYF----DFFLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSL----NFVYNN 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 265 SFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHS 344
Cdd:MTH00094 215 FWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKS 294
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2725689047 345 RTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFNWSSPTILLTGTATLLTASYTLFMLT 417
Cdd:MTH00094 295 RLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
54-390 |
4.20e-39 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 147.87 E-value: 4.20e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 54 QWT-GADQTSSPLLVLSCWLLPLMILASQNhLHHEPptrkRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLIL 132
Cdd:PRK12561 52 EWSlGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 133 ITRWGNQpERLSAGIYLLFYTLISSLPLLVAVLFL--QSQTGTLHLPTLKLTPYSLlptptnhWSTLLLNTALLMAFMVK 210
Cdd:PRK12561 127 ISIWGGQ-KRLYAATKFILYTALASIFILVAGLALalSGDTFTFDLAELGAKSYPL-------ALELLLYAGFLIAFGVK 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 211 APLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYSFITLA----LWGALMTssicLRQVD 286
Cdd:PRK12561 199 LPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGvvniIYGALNA----FAQDN 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 287 LKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHsrTLLLAQ--GLQPLLPLMAIWW 364
Cdd:PRK12561 275 VKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTH--TLSIPNmgGLAKVMPKTFALF 352
|
330 340
....*....|....*....|....*.
gi 2725689047 365 LLANLTNMALPPTTNLMAELSIMVAL 390
Cdd:PRK12561 353 TASSMASLALPGMSGFVSELTVFLGI 378
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-392 |
1.95e-38 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 144.52 E-value: 1.95e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 58 ADQTSSPLLVLSCWLLPLMILASQNHLHHEppTRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITrWG 137
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 138 NQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTpYSLLPTPTNHWSTLLLntalLMAFMVKAPLYGLH 217
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR-LAELDPGLLLAAFALL----LVGFGIKAALFPLH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 218 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRL-TCLTPPPPNNLLHYSFITLALWGALMTSSICLRQVDLKSLIAYSSV 296
Cdd:COG0651 226 FWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVlTLLFGADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 297 SHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPP 376
Cdd:COG0651 306 SQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPP 385
|
330
....*....|....*.
gi 2725689047 377 TTNLMAELSIMVALFN 392
Cdd:COG0651 386 LSGFVSKWLLLQAALE 401
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
45-390 |
2.04e-35 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 137.92 E-value: 2.04e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 45 SYYPYKNLTQWTGADQTSSPLLVLSCWLLPLMILASQnhlhhePPTRK-RIFTATLIAVQPFIISAFSTTELMMFYISFE 123
Cdd:PRK02546 72 SWLPQLGLTWSVGADGLSMPLILLTGFITTLAVLAAW------PVTFKpKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWE 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 124 ATLIPTLILITRWGNQpERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTlhlPTLKLTPYSLLPTPTNHwsTLLLNTAL 203
Cdd:PRK02546 146 LELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDT---PTFDMTALAAKDFGLGF--QLLCYAGL 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 204 LMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYSFITLALWGALMTSSICLR 283
Cdd:PRK02546 220 LIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 284 QVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIW 363
Cdd:PRK02546 300 QRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAM 379
|
330 340
....*....|....*....|....*..
gi 2725689047 364 WLLANLTNMALPPTTNLMAELSIMVAL 390
Cdd:PRK02546 380 WTACSLASLALPGMSGFVAELMVFVGF 406
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
57-392 |
9.46e-32 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 127.12 E-value: 9.46e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 57 GADQTSSPLLVLSCWLLPLMILASQNHLHhepptRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRW 136
Cdd:PRK06473 76 GVDGLSLPLLVLNSLLTLIAIYSSDESIQ-----RPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 137 GNQpERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGtlhLPTLKLTPY--SLLPTPTNhwstLLLNTALLMAFMVKAPLY 214
Cdd:PRK06473 151 GGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSG---ASSFDYEPLrsHTLPLSTQ----LLLLAPILVGFGIKIPLV 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 215 GLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYSFITLALWGALMTSSICLRQVDLKSLIAYS 294
Cdd:PRK06473 223 PFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYS 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 295 SVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGL---QPLLPLMAIWWLLANLTN 371
Cdd:PRK06473 303 SIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMAS 382
|
330 340
....*....|....*....|.
gi 2725689047 372 MALPPTTNLMAELSIMVALFN 392
Cdd:PRK06473 383 AGIPGMVGFIAEFLVFRGSFP 403
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-384 |
3.87e-29 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 119.66 E-value: 3.87e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 57 GADQTSSPLLVLSCWLLPLMILASQnhlhhePPTRK-RIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITR 135
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSM 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 136 WGNQpERLSAGIYLLFYTLISSLPLLVAVL---FLQSQTGTLHLPTLKLTPYSLLptptnhwSTLLLNTALLMAFMVKAP 212
Cdd:CHL00011 155 WGGK-KRLYSATKFILYTAGGSIFLLIGVLgmgLYGSNEPTLNFETLANQSYPVA-------LEILFYIGFLIAYAVKLP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 213 LYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCltppppnNLL---HYSFIT-LALWGALM---TSSICLRQV 285
Cdd:CHL00011 227 IIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINM-------ELLphaHSIFSPwLVIVGAIQiiyAASTSLGQR 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 286 DLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERThsRTLLLAQ--GLQPLLPLMAIW 363
Cdd:CHL00011 300 NLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTM 377
|
330 340
....*....|....*....|.
gi 2725689047 364 WLLANLTNMALPPTTNLMAEL 384
Cdd:CHL00011 378 FSSFSMASLALPGMSGFVAEL 398
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
57-383 |
4.05e-27 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 113.65 E-value: 4.05e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 57 GADQTSSPLLVLSCWLLPLMILASQNHLHhepptRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRW 136
Cdd:PRK07363 76 GVDGLSLPLLVLNSLLTWIAIYSIGENTE-----RPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 137 GNQpERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTlhlPTLKLTPYSLLPTPTNhwSTLLLNTALLMAFMVKAPLYGL 216
Cdd:PRK07363 151 GGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGS---TSFDYDAISTQNLSLN--TQLILLTGLLLGFGIKIPLVPL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 217 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHysfITLALWGA---LMTSSICLRQVDLKSLIAY 293
Cdd:PRK07363 225 HTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVA---PGLAIIGTisvIYGALSAIAQKDIKRMVAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 294 SSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGL-QPL--LPLMAIWWLLANLT 370
Cdd:PRK07363 302 SSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGMA 381
|
330
....*....|...
gi 2725689047 371 NMALPPTTNLMAE 383
Cdd:PRK07363 382 SAGIPGLVGFVAE 394
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-107 |
3.30e-24 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 96.82 E-value: 3.30e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 1 MLKIVLPTMMLLPTALLSPLKFMWANTTMHSLLIAALSLQWLT-PSYYPYKNLTQWTGADQTSSPLLVLSCWLLPLMILA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100
....*....|....*....|....*...
gi 2725689047 80 SQNHLHHEPPTRKRIFTATLIAVQPFII 107
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLI 108
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-391 |
6.20e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 98.50 E-value: 6.20e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 58 ADQTSSPLLVLSCWLLPLMILASQNHLHHEppTRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRWG 137
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHE--SGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 138 NQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTPYSLLPTPTNH------WSTLLLNTALLMAFMVKA 211
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGGlagnppLALGVALALALWAFTIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 212 PLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRL------TCLTPPPPNNLLHYSFITLALWGALMTSSICLRQV 285
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgISPSLIDFRAALSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 286 DLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWL 365
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFL 397
|
330 340
....*....|....*....|....*.
gi 2725689047 366 LANLTNMALPPTTNLMAELSIMVALF 391
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALL 423
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-391 |
1.20e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 91.09 E-value: 1.20e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 109 AFSTTELMMFYISFEATLIPTLILITRWGNqPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLkltPYSLLP 188
Cdd:PRK08375 122 ALLTADLFNLFVFLEIMSLSSYALVAMGGD-RRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADL---AGALAE 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 189 TPTnhwstllLNTAL---LMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRL--TCLTPPPPNNL-L 262
Cdd:PRK08375 198 NPT-------VVTAFgfvLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIyfTVFGGDFRFALgL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 263 HYSFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERT 342
Cdd:PRK08375 271 GWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTY 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2725689047 343 HSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALF 391
Cdd:PRK08375 351 GTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAV 399
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-389 |
1.85e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 75.39 E-value: 1.85e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 58 ADQTSSPLLVLSCW-LLPLMILA-SQNHLHHEPPTRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITR 135
Cdd:PRK12665 74 VDRLSALMLVVSSVvLLAVLVYAiGQGIRDGDEEQPVSIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 136 wGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTpYSLLPTPTnhwsTLLLNTALLMAFMVKAPLYG 215
Cdd:PRK12665 154 -GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVR-LDELPSGT----RTALFAVLLVAFGIKAAVFP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 216 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPppnnllHYSFITLALWGALMTSSI----CLRQVDLKSLI 291
Cdd:PRK12665 228 LSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP------GGGLDTLLMVVALLTMVVgilgAIAQSDIKRLL 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 292 AYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTN 371
Cdd:PRK12665 302 SFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNL 381
|
330
....*....|....*...
gi 2725689047 372 MALPPTTNLMAELSIMVA 389
Cdd:PRK12665 382 GGIPPFSGFIGKVALLEA 399
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-344 |
1.17e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 72.68 E-value: 1.17e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 91 RKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQ 170
Cdd:PRK07234 92 KTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQA 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 171 TGTLHLPTLKLTPysllPTPTnhwstlllntALL-MAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMR 249
Cdd:PRK07234 171 NGTFAFSGLATAD----PEAF----------ALIaLGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVR 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 250 LTCLTPPPPNNLLHYSFITlalwgALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIqtywsfsgAMILMISHGLTSS 329
Cdd:PRK07234 237 CALDVPGLDLIVRIFGVGT-----ALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKS 303
|
250
....*....|....*
gi 2725689047 330 MLFCLANTNYERTHS 344
Cdd:PRK07234 304 TLFLCAGALPSRNFT 318
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
57-391 |
2.95e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 72.07 E-value: 2.95e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 57 GADQTSSPLLVLSCWLLPLMILASQNHLHHEPPTRKRIFTATLIAVQPF----IISAFSTTELMMFYisfEATLIPTLIL 132
Cdd:PRK08667 74 HIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsmlgVVASANTFSFLFFW---EIMALSSFFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 133 ITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTPYSLLptptnhwstlLLNTALLMAFMVKAP 212
Cdd:PRK08667 151 VMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILS----------LVFLLLFLGFGIKAG 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 213 LYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTcLTPPPPNNLLHYSFITLALWGALMTSSICLRQVDLKSLIA 292
Cdd:PRK08667 221 IIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFL-MDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 293 YSSVSHMGLVIAAcmIQTYWSFS-------------GAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPL 359
Cdd:PRK08667 300 YSSIENIGIILMG--IGLYVIFGvygldtlallalgGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPY 377
|
330 340 350
....*....|....*....|....*....|..
gi 2725689047 360 MAIWWLLANLTNMALPPTTNLMAELSIMVALF 391
Cdd:PRK08667 378 TSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
203-392 |
8.05e-12 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 66.88 E-value: 8.05e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 203 LLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLT-----PPPPNNLLhysfITLALWGALMT 277
Cdd:PRK06458 220 LLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaaigSDFPGRLL----LIFGLLSVLVA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 278 SSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLL 357
Cdd:PRK06458 296 AFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVS 375
|
170 180 190
....*....|....*....|....*....|....*
gi 2725689047 358 PLMAIWWLLANLTNMALPPTTNLMAELSIMVALFN 392
Cdd:PRK06458 376 PLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLA 410
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-389 |
1.66e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 65.91 E-value: 1.66e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 119 YISFEATLIPTLILITRWGNQPERLSAGIYLLFYTlISSLPLLVAVLFLQSQTGTLHLPTLKLTpysLLPTPTNHwsTLL 198
Cdd:PRK12662 136 YVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGT-IGATFYLIGIGFLYAITGTLNMGDMFLI---IQDLPTNR--AIQ 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 199 LNTALLM-AFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLT--------CLTPPPPNNLlhysFITL 269
Cdd:PRK12662 210 IGVLFIMvGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkanfVFTTLPFNNV----FMIL 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 270 ALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANT---NYERTHSRT 346
Cdd:PRK12662 286 AALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLED 365
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 2725689047 347 LLlaqGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVA 389
Cdd:PRK12662 366 CL---NLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDA 405
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
111-392 |
2.12e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 65.89 E-value: 2.12e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 111 STTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTpYSLLPTP 190
Cdd:PRK08376 139 ITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVK-MSENPTV 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 191 TNHWSTLLLNTALLMafmvKAPLYGLHLWLPKAHVEAPiaGSMLLAALLLKLGG-YGIMR--LTCLTPPPPNNLLHYSFI 267
Cdd:PRK08376 218 VAKIALALFIAGLAM----KSGAVPVHMWLPDAYPAAP--SSISAMLLVIKQAGlYALARvlFSIYGPAINLATVGWVII 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 268 TLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLV-------IAACMIQTYWSF-----SGAMILMISHGLTSSMLFCLA 335
Cdd:PRK08376 292 ILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMllglgvgLAALGDPAMASYgeialAGGIYHIVNHALYKALLFLTA 371
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2725689047 336 NTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIM--VALFN 392
Cdd:PRK08376 372 GAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYesSALFN 430
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
115-392 |
2.20e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 65.33 E-value: 2.20e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 115 LMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLptlkltpysLLPTPTNHW 194
Cdd:MTH00062 93 SLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNF---------SDWGSDDSV 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 195 StLLLNTALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTppPPNNLLHYSFITLALWGA 274
Cdd:MTH00062 164 S-LIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFI--FSGSFLGYLFLCCLFSVF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 275 LMTSSicLRQVDLKSLIAYSSVSHMglVIAACMIQTYWSFSGAMILMIS--HGLTSSMLFCLANTNYERTHSRTLLLAQG 352
Cdd:MTH00062 241 FLITA--CSELDGKRWLAFLSLSHI--LVPVLGLFVGDWSSINLSFFYClgHGLSAGLVFLLLWCFYEVSGSRNWVLLKS 316
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 2725689047 353 LQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFN 392
Cdd:MTH00062 317 GINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFG 356
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
114-377 |
3.73e-11 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 65.45 E-value: 3.73e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 114 ELMMFYISFEATLIPTLILITRWGNQPErlSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLkltpysLLPTPTNH 193
Cdd:PRK12650 131 DVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGI------LHSDVWAE 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 194 WSTLLLNTALLMAFMV--KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPnnLLHYSFITLAL 271
Cdd:PRK12650 203 KPGLTTVVAVLIAVAAftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVA--VWNWLLIIVGM 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 272 WGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQ 351
Cdd:PRK12650 281 ITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLG 360
|
250 260
....*....|....*....|....*.
gi 2725689047 352 GLQPLLPLMAIWWLLANLTNMALPPT 377
Cdd:PRK12650 361 SLWRRMPFTFVSVTIAALSMAAVPPL 386
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
155-392 |
5.31e-11 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 64.40 E-value: 5.31e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 155 ISSLPLLVAVLFLQSQTGTLHLPTLKLTPYSLLPTPTNHWSTLLLntallMAFMVKAPLYGLHLWLPKAHVEAPIAGSML 234
Cdd:PRK08377 169 IGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPTVAQVGLALLI-----FGLAVEAELFPLNAWAPDAYQAAPHPITVM 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 235 LAALLLKLGGYGIMRLTCLTPPPP--NNLLHYsFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYW 312
Cdd:PRK08377 244 FSAFVVKAGLYAMARILYLMQNANgwSSVLKL-VIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQA 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 313 SFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFN 392
Cdd:PRK08377 323 GVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLS 402
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-391 |
7.32e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 64.20 E-value: 7.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 106 IISAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFyTLISSLPLLVAVLFLQSQTGTLHLPTLKLTPYS 185
Cdd:PRK07691 121 VNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADISVKIAE 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 186 LLPTPTNHWSTLLLntALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYS 265
Cdd:PRK07691 200 LSAGQTGLITVVAI--LFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYL 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 266 FITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSR 345
Cdd:PRK07691 278 ILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTT 357
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2725689047 346 TLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALF 391
Cdd:PRK07691 358 DLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTF 403
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
106-390 |
3.76e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 61.69 E-value: 3.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 106 IISAFSTTELMMFYISFEATLIPTLILITRWgNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQT-GTLHLPTLKLTPY 184
Cdd:PRK08676 115 ITFAFFSDNLALFWIFAELTTVFSAMLIAIL-SARENIDAALKYIFIASTAMIFAFIGLIFLFSLTrQALGTGTLNWTEL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 185 SLLPTPTNHWSTLLLNTALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLT------PPPP 258
Cdd:PRK08676 194 AAHASLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqsgaaEQFS 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 259 NNLLHYSFITLALWGALMtssicLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTN 338
Cdd:PRK08676 274 NVLIGLGIFSIAVAAFSM-----LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGIL 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2725689047 339 YERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVAL 390
Cdd:PRK08676 349 HRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
115-332 |
4.51e-10 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 61.71 E-value: 4.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 115 LMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLkltpYSLLPTPTNHW 194
Cdd:COG1009 133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSEL----LAAAPTILSSP 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 195 STLLLNTALLMAFMVKAPLYGLHLWLPKAhVEAPI-------------AGSmllaalllklggYGIMRLtcltppppNNL 261
Cdd:COG1009 209 LLTLILLLLLLGAFGKSAQFPLHFWLPDA-MEGPTpvsallhaatmvkAGV------------YLLARL--------SPL 267
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2725689047 262 LHYS---FITLALWG---ALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSfsgAMILMISHGLTSSMLF 332
Cdd:COG1009 268 FALSpvwLTVVAIIGaitALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVA---ALFHLLTHAFFKALLF 341
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
110-332 |
8.78e-10 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 60.78 E-value: 8.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 110 FSTTELMMFYISFEATLIPTLILITRwGNQPERLSAGIYLLFyTLISSLPLLVAVLFLQSQTGTLHLPTLKltpYSLLPT 189
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFADIS---QGLIND 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 190 PTNHWstLLLNTALLMAFMV-KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYG-IMRLTCLtpppPNNLLHYSFI 267
Cdd:PRK08668 190 TSTGF--ALIVFLFLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGfLLVLYVL----PGTKLFSEFG 263
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2725689047 268 T----------LALWGAL---MTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLF 332
Cdd:PRK08668 264 TyrgvplfnyiLAWLGNIsiiVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
112-397 |
9.72e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 60.60 E-value: 9.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 112 TTELMMFYISFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPL-LVAVLFLQSQTGTLHLPTLKLTPysllptp 190
Cdd:PRK06589 135 SSDLFTMFVCYELLTISTAFLIG-HTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLFS------- 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 191 TNHWSTLLLntaLLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYS----F 266
Cdd:PRK06589 207 KNQSIILLL---MFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAefnwL 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 267 ITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRT 346
Cdd:PRK06589 284 IFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQ 363
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2725689047 347 LLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFNWSSPT 397
Cdd:PRK06589 364 VDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPW 414
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
116-375 |
2.62e-09 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 59.38 E-value: 2.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 116 MMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTPYSLLPTPTNHWS 195
Cdd:PRK12646 133 ILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPM 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 196 TLLLntaLLMAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRLTCLTPPppNNLLHYSFITLALWGA 274
Cdd:PRK12646 213 IFMF---LLGAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPLLGL--SNMYIYIVTFVGLITM 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 275 LMTSSICLRQVDLKSLIAYSSVSHMGLVIAAC-------------MIQTY-WSFSGAMILMISHGLTSSMLFCLANTNYE 340
Cdd:PRK12646 286 LFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggyaqhqqdaIASIYvFVLFAALFHLMNHAIFKCALFMGVGIIDH 365
|
250 260 270
....*....|....*....|....*....|....*
gi 2725689047 341 RTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALP 375
Cdd:PRK12646 366 EAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVP 400
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
106-376 |
5.23e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 58.04 E-value: 5.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 106 IISAFSTTELMMFYISFEATLIPTLILITrWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTPYS 185
Cdd:PRK12663 121 VIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLND 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 186 LLPTPTnhwsTLLLNTALLMAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYS 265
Cdd:PRK12663 200 MGDTAT----LTTIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 266 FITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSR 345
Cdd:PRK12663 275 LATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYR 354
|
250 260 270
....*....|....*....|....*....|.
gi 2725689047 346 TLLLAQGLQPLLPLMAIWWLLANLTNMALPP 376
Cdd:PRK12663 355 SLQYLGGLYRKEPLFGALFLILIFAIGGLPP 385
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-377 |
3.11e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 56.08 E-value: 3.11e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 115 LMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLkLTPYSLLPTptNHW 194
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSEL-LASGDVIRE--HPL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 195 STLLLNTALLMAFmVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRLTCL---TPPppnnllhySFITLA 270
Cdd:PRK12647 194 YLAILLLVLGGAF-TKSAQFPFHFWLPNA-MEAPTPVSAYLHSATMVKAGiYLLARLNPVlggTPL--------WQTILP 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 271 LWGA---LMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTL 347
Cdd:PRK12647 264 LFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDI 343
|
250 260 270
....*....|....*....|....*....|
gi 2725689047 348 LLAQGLQPLLPLMAIWWLLANLTNMALPPT 377
Cdd:PRK12647 344 TKLGGLRRAMPITAAAALLAALSMAGLPPL 373
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
117-391 |
5.62e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 55.28 E-value: 5.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 117 MFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLP---TLKLTPYsllptptnh 193
Cdd:PRK06521 137 SFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAamrAAHLSPF--------- 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 194 WSTLLLNTALLmAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPnnLLHYSFITLALWG 273
Cdd:PRK06521 208 WASLVFLLALF-GFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAP--GWWWGVLVLALGA 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 274 --ALMTSSICLRQVDLKSLIAYSSVSHMGLVIAA---CMI-QTY-------WSFSGAMILMISHGLTSSMLFCLANTNYE 340
Cdd:PRK06521 285 isAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGlglAMVfIAYgmpllaaLALTAALYHLLNHALFKSLLFLGAGAVLH 364
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2725689047 341 RTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALF 391
Cdd:PRK06521 365 ATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLL 415
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
111-392 |
1.56e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 53.41 E-value: 1.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 111 STTELMMFYISFEATLIPTLILITRWGNQPERLSAGI-YLLFYTLISSLpLLVAVLFLQSQTGTLHLPTLKLtpysLLPT 189
Cdd:TIGR01770 120 SSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGAFSSGL-LLFGISLIYGFTGSLNFEDLLL----FLSN 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 190 PTNHWSTLLLNTAL-LMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYSFIT 268
Cdd:TIGR01770 195 GMLNISLLLLGIVLiLVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGFSEAWQIFLAI 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 269 LALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLF-CLANT-NYERTHSRT 346
Cdd:TIGR01770 275 IAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEY 354
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2725689047 347 LLLAQGLQPLLPLMAIWWLLANLTNMALPPTTNLMAELSIMVALFN 392
Cdd:TIGR01770 355 ISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLK 400
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-376 |
2.56e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 49.83 E-value: 2.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 109 AFSTTELMMFyISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTPySLLP 188
Cdd:PRK12649 128 VFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDS-ELIE 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 189 TPTNHWSTLLLNTALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRLTCLTPPPPNNLLHYSFI 267
Cdd:PRK12649 206 NIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNA-MEAPTPVSAFLHSATMVKAGvYLVARIHPIFSGTEAWFILVSGT 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 268 TLALwgALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTY----WSFSGAMILMISHGLTSSMLFCLANTNYERTH 343
Cdd:PRK12649 285 GMIT--MVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHATFKACLFLVAGIVAHEAA 362
|
250 260 270
....*....|....*....|....*....|...
gi 2725689047 344 SRTLLLAQGLQPLLPLMAIWWLLANLTNMALPP 376
Cdd:PRK12649 363 TRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
110-376 |
2.70e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 49.59 E-value: 2.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 110 FSTTELMMFyISFEATLIPTLILITRWGNqPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTPYSLlpt 189
Cdd:PRK06525 131 YSSTLLGLL-LFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSL--- 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 190 ptnhwsTLLLNTALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYSFITL 269
Cdd:PRK06525 206 ------KYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVM 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 270 ALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWS---FSGAMILMISHGLTSSMLFCLANTNYERTHSRT 346
Cdd:PRK06525 279 AIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSrlaLEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRL 358
|
250 260 270
....*....|....*....|....*....|
gi 2725689047 347 LLLAQGLQPLLPLMAIWWLLANLTNMALPP 376
Cdd:PRK06525 359 LPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
111-328 |
2.88e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 49.34 E-value: 2.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 111 STTELMMFYISFEATLIPTLILITRWGNQPERLSAGI-YLLFYTLISSLpLLVAVLFLQSQTGTLHLPTLkltpysLLPT 189
Cdd:COG1007 120 SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGF-LLYGISLLYGATGSLNLAGI------AAAL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 190 PTNHWSTLLLNTALLM---AFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYSF 266
Cdd:COG1007 193 AAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLLL 272
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2725689047 267 ITLA----LWGALMTssicLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTS 328
Cdd:COG1007 273 AVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMN 334
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
137-335 |
3.64e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 49.08 E-value: 3.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 137 GNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTPYSLLPTptnhwSTLLLNTA---LLMAFMVKAPL 213
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAA-----DRALLEAGaalLLVVFLIKAAM 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 214 YGLHLWLPKAHVEA--PIAGSMllaALLLKLGGYGIMRLTCLTPPPPNNLLHYSFITLALWGALMTSSI----CLRQVDL 287
Cdd:PRK12666 227 WPLNFWLPPAYAAAsaPVAALF---AIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRL 303
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2725689047 288 KSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLA 335
Cdd:PRK12666 304 RRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
112-376 |
1.65e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.95 E-value: 1.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 112 TTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLpLLVAVLFLQSQTGTLHLPTLKltpYSLLPTPT 191
Cdd:PRK06277 119 ADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNITDIH---NALLVNPT 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 192 NhwsTLLLNTALLMAF------------MVKAPLYGLHLwlpkahveaPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPN 259
Cdd:PRK06277 195 S---PVIYGGLLLLIFgllygsglppfhTIKSDIYAKAK---------PFGSALLQTFSKFVLVALMLVIFKLFGGLSYF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 260 NLLHYSFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNY 339
Cdd:PRK06277 263 PSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVS 342
|
250 260 270
....*....|....*....|....*....|....*..
gi 2725689047 340 ERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPP 376
Cdd:PRK06277 343 YRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
105-375 |
2.15e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.99 E-value: 2.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 105 FIISAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLkltpY 184
Cdd:MTH00020 123 LMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSV----F 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 185 SLLPT-PTNHWSTLLLntALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRLTCLTPPPPNNLL 262
Cdd:MTH00020 199 NMVVSaPSSDITLICL--FLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLLIRSSPLFEQAPLALI 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 263 hySFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYwsfSGAMILMISHGLTSSMLFCLANTN-YER 341
Cdd:MTH00020 276 --IVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHY---SISLFHLMNHAFFKALLFLSAGSViHAL 350
|
250 260 270
....*....|....*....|....*....|....
gi 2725689047 342 THSRTLLLAQGLQPLLPLMAIWWLLANLTNMALP 375
Cdd:MTH00020 351 SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFP 384
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
78-349 |
6.36e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 45.16 E-value: 6.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 78 LASQNHLHHEPPTRKRIFTATLIAVQPFIISAFSTTELMMFYISFEATLIPTLILITRwGNQPERLSAGIYLLFYTLISS 157
Cdd:PRK06591 100 ITNQTILKYINNNRKSLFYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIAS-GNNPKSLIGAFDYLIMGSIGA 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 158 LPLLVAVLFLQSQTGTLHLPTLKltpySLLPTPTNHWSTLLLNTALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAA 237
Cdd:PRK06591 179 TLILIAIGFLLSITGSLNMTDIA----AYLQEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAG 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 238 LLLKLGGYGIMRLTCLTPPPPN-NLLHYSFIT-LALWGALMTSSICLRQVDLKSLIAYSSVSHMGLViaacmIQTYWSFS 315
Cdd:PRK06591 255 ISTIIGIYIIYKFTYIIIGYETiKTAITNFIRpIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYV-----FLLYVTEN 329
|
250 260 270
....*....|....*....|....*....|....*....
gi 2725689047 316 GAMI---LMISHGLTSSMLFCLA--NTNYERTHSRTLLL 349
Cdd:PRK06591 330 GIIIlpsLLLADSINKIALFLIDayNESYKREPNKVLII 368
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
115-377 |
7.25e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 45.30 E-value: 7.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 115 LMMFYISFEATLIPTLILItrwGNQPERLS---AGIYLLFYTLISSLPLLVAVLFLQSQTGTlhlptlkltpYSLLPTPT 191
Cdd:PRK12644 128 LLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGT----------YRLSELLA 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 192 NHWSTLLLNTA---LLMAFMVKAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIMRLTcltpPPPNNL 261
Cdd:PRK12644 195 DPPTGPAVSVAvvlILVGALSKSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKA------GIYLVARLA----PGFADV 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 262 LHYSFITLALWGALMTSS--ICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLFCLANTNY 339
Cdd:PRK12644 264 PVWRPTVLVLGLATMLLGgwRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIID 343
|
250 260 270
....*....|....*....|....*....|....*...
gi 2725689047 340 ERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPT 377
Cdd:PRK12644 344 HSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPL 381
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
155-392 |
7.43e-05 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 45.20 E-value: 7.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 155 ISSLPLLVAVLFLQSQTGTLHLPTLKLTPySLLPTPTNHWSTLLLNTALLmafmvkAPLYGLHLWLPKAHVEAPIAGSML 234
Cdd:PRK08042 145 LGTLLLAIACWLLWQRYGTLDLRLLDMRM-QQLPLGSDIWLLGVIGFGLL------AGIIPLHGWVPQAHANASAPAAAL 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 235 LAALLLKLGGYGIMRLTCLTPPPPnnlLHYSFITLALwgALMTSSI----CLRQVDLKSLIAYSSVSHMGLVIAAC---- 306
Cdd:PRK08042 218 FSTVVMKIGLLGILTLSLLGGNAP---LWWGVALLVL--GMITAFVgglyALMEHNIQRLLAYHTLENIGIILLGLgagv 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 307 -------MIQTYWSFSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWWLLANLTNMALPPTTN 379
Cdd:PRK08042 293 tgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNG 372
|
250
....*....|...
gi 2725689047 380 LMAELSIMVALFN 392
Cdd:PRK08042 373 FAGEWVIYQSFFK 385
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
140-332 |
1.12e-04 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 44.50 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 140 PERLSAGI-YLLFYTLiSSLPLLVAVLFLQSQTGTLhlptlKLTPYSLLPTPtnhwSTLLLntalLMAFMVKAPLYGLHL 218
Cdd:PRK12668 139 KAAVRAGFrYLLVHVL-GGVLLLAGILLHYAETGSF-----AFGAIAGLGGT----AAWLI----LIGFGVNAAFPPLHA 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 219 WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTcltppPPNNLLHYSFITLALWGALMTssicLRQVDLKSLIAYSSVSH 298
Cdd:PRK12668 205 WLPDAYPEATVTGSVFLSAFTTKTAVYALARAF-----PGTELLIYIGAAMAVYGVFFA----LLENDLRRLLSYHIVSQ 275
|
170 180 190
....*....|....*....|....*....|....
gi 2725689047 299 MGLVIAACMIQTYWSFSGAMILMISHGLTSSMLF 332
Cdd:PRK12668 276 VGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
119-332 |
1.26e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 44.61 E-value: 1.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 119 YISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLkltpYSLLPTPTNHWSTLL 198
Cdd:MTH00210 137 FIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTI----SSLLVTNINKESLTI 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 199 LNTALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIMRLTCLTPPPPNNLLHYSFITlALwGALMT 277
Cdd:MTH00210 213 ICLLLFIGAVGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLIIRSGPLFEGSPLALTIVTILG-AL-TAFFA 289
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2725689047 278 SSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYwsfSGAMILMISHGLTSSMLF 332
Cdd:MTH00210 290 ATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNY---STSLFHLMNHAFFKALLF 341
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
282-328 |
3.32e-04 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 42.89 E-value: 3.32e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2725689047 282 LRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTS 328
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
106-369 |
3.97e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 42.86 E-value: 3.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 106 IISAFSTTELMMFYISFEATLIPTLILITRWGNQPerlSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHlptlkltpYS 185
Cdd:PRK06459 85 MAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNK---RPAFVFMAFGELSTVLILAGFAWAFIISGTTN--------FS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 186 LLPTPtnhWSTLLLNtallMAFMVKAPLYGLHL--WLPKAHVEAPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLH 263
Cdd:PRK06459 154 YLPSP---VPLILAS----FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFG 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 264 YSFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAAC--------MIQTYWSFSGAMILM--ISHGLTSSMLFC 333
Cdd:PRK06459 227 LTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALglymvtkqLITSIEHFSLITVILysFAHSVAKTGLFL 306
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2725689047 334 ------------LANTNYERTHSRTLLLAQGLQPLLPL---MAIWWLLANL 369
Cdd:PRK06459 307 ssglqekqsitySKKIRNRWIELGLTLLASSLSGLLPNiggVASWLLLESL 357
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
154-332 |
1.02e-03 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 41.56 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 154 LISSLPLLVAVLFLQSQTGTLHL-PTLKLTPYSLLptptNHWSTLLLNTALLMAFMVKAPLYGLHLWLPKAHVeAPIAGS 232
Cdd:PRK08601 164 LISWLALALAIVWLFIATGEWQLtSVLSNENLAQL----GTWEKTGINLLLILAVMIPAAQWPFQRWLIESAV-APTPVS 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 233 MLLAALLLKLGGygIMrLTCLTPPPPNNLLHYSFITLALWGALMTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYw 312
Cdd:PRK08601 239 AIMHAGLVNAGG--IM-LTRFSPLFHDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAY- 314
|
170 180
....*....|....*....|
gi 2725689047 313 sfSGAMILMISHGLTSSMLF 332
Cdd:PRK08601 315 --SAAIIHLILHGLFKATLF 332
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
203-395 |
1.69e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 40.25 E-value: 1.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 203 LLMAFMVKAPLYGLHLWLPkahveaPIAGSMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYSFITLALWGALMTSSICL 282
Cdd:MTH00144 90 LLLGLCLKLGLFPFHFWVP------SVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCVISVLSALVGSIGGL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 283 RQVDLKSLIAYSSVSHMGLVIAACMIqTYWSFsgAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAqglqplLPLMAI 362
Cdd:MTH00144 164 NQTQVRALLAYSSISHTGWMLVAILH-GSWLM--WMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKP------SYKTGL 234
|
170 180 190
....*....|....*....|....*....|...
gi 2725689047 363 WWLLANLTNMALPPTTNLMAELSIMVALFNWSS 395
Cdd:MTH00144 235 SIISLLLSLGGLPPFLGFCSKLLVLISSMESSP 267
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
116-378 |
2.01e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 40.71 E-value: 2.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 116 MMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKL---------TPYSL 186
Cdd:MTH00032 134 LQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNGgsvgsgimdRGYYG 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 187 LPTPTNHWSTL-LLNTALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIM-RLTCLTPPPPNNLLhy 264
Cdd:MTH00032 214 GGAYESPLAPFaIIGILLLIGCIGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMiRSFPLFEKAPLTLL-- 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 265 sfiTLALWGAL---MTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTywSFSGAMILMISHGLTSSMLFCLA-----N 336
Cdd:MTH00032 291 ---IITIFGALtafFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAgsvihS 365
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2725689047 337 TNYERTHSRTLllaQGLQPLLPLMAIWWLLANLTNMALPPTT 378
Cdd:MTH00032 366 TTVDEQDMRKM---GGLIHSIPFTYTMMLIGSFSIMGLPYLT 404
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
129-376 |
3.20e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 39.89 E-value: 3.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 129 TLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTPYSLLPTPTnhWSTLLlNTALLMAFM 208
Cdd:PRK07390 156 TYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAATANLDPL--TATLL-GLALIAGPT 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 209 VKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIMRLT---CLTPPPPNNLLHYSFITlalwgALMTSSICLRQV 285
Cdd:PRK07390 233 GKCAQFPLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQpvlALSPVALTVLIVIGTVT-----AIGASLVAIAQI 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 286 DLKSLIAYSSVSHMGLV-IAACMIQTywsfSGAMILMISHGLTSSMLFCLANTNYERTHSRTLLLAQGLQPLLPLMAIWW 364
Cdd:PRK07390 307 DIKRALSYSTSAYLGLVfIAVGLQQP----DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAF 382
|
250
....*....|..
gi 2725689047 365 LLANLTNMALPP 376
Cdd:PRK07390 383 LVGSAGLVALLP 394
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
160-332 |
5.41e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 39.24 E-value: 5.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 160 LLVAVLFLQSQTGTLHLPTLKLTPYSLLPTPT-NHWSTLLLNTALLMAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAAL 238
Cdd:PRK07376 189 LLLGILGLFWATGSFDFDGIADRLSELVSSGAvSGWLALLLCILVFLGPMAKSAQFPLHVWLPDA-MEGPTPISALIHAA 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 239 LLKLGG-YGIMRLTCLTPPPPNNLLhysfiTLALWGAL---MTSSICLRQVDLKSLIAYSSVSHMGLVIAACMIQTYwsf 314
Cdd:PRK07376 268 TMVAAGvFLVARMYPVFEQFPAVMT-----VIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAY--- 339
|
170
....*....|....*...
gi 2725689047 315 SGAMILMISHGLTSSMLF 332
Cdd:PRK07376 340 SAGLFHLMTHAYFKAMLF 357
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
106-332 |
6.36e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 38.86 E-value: 6.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 106 IISAFSTTELMMFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVAVLFLQSQTGTLHLPTLKLTPYS 185
Cdd:MTH00196 6 ILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLNS 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2725689047 186 LLPTptNHWSTLLLNTALLMAFMVKAPLYGLHLWLPKAHVEAPiagsMLLAALLLKLGGYGIMRLTCLTPPPPNNLLHYS 265
Cdd:MTH00196 86 GQSF--SSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNILLIGG 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2725689047 266 FITLALwGALMTssicLRQVDLKSLIAYSSVSHMGLVIAACMIQTYWSFSGAMILMISHGLTSSMLF 332
Cdd:MTH00196 160 LFSLFV-GAIGA----LNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVF 221
|
|
| |
