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Conserved domains on  [gi|2796891201|ref|WP_373278020|]
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hypothetical protein [Geobacillus jurassicus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
XhlA super family cl11371
Haemolysin XhlA; XhlA is a cell-surface associated haemolysin that lyses the two most ...
 10-57 7.95e-04

Haemolysin XhlA; XhlA is a cell-surface associated haemolysin that lyses the two most prevalent types of insect immune cells (granulocytes and plasmatocytes) as well as rabbit and horse erythrocytes. This family has had DUF1267, pfam06895, merged into it.


The actual alignment was detected with superfamily member pfam10779:

Pssm-ID: 402419 [Multi-domain]  Cd Length: 67  Bit Score: 35.72  E-value: 7.95e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 2796891201  10 SMKQELQTVKQKVDKLEQRMDKQEEELRWLKEQMKENTEMIKAIRDNQ 57
Cdd:pfam10779   1 EIKERLARIETKLDNLEERVDKLERKAAEAETKIKNLCEDLKKIESNQ 48
 
Name Accession Description Interval E-value
XhlA pfam10779
Haemolysin XhlA; XhlA is a cell-surface associated haemolysin that lyses the two most ...
 10-57 7.95e-04

Haemolysin XhlA; XhlA is a cell-surface associated haemolysin that lyses the two most prevalent types of insect immune cells (granulocytes and plasmatocytes) as well as rabbit and horse erythrocytes. This family has had DUF1267, pfam06895, merged into it.


Pssm-ID: 402419 [Multi-domain]  Cd Length: 67  Bit Score: 35.72  E-value: 7.95e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 2796891201  10 SMKQELQTVKQKVDKLEQRMDKQEEELRWLKEQMKENTEMIKAIRDNQ 57
Cdd:pfam10779   1 EIKERLARIETKLDNLEERVDKLERKAAEAETKIKNLCEDLKKIESNQ 48
EnvC COG4942
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
 5-86 6.89e-03

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443969 [Multi-domain]  Cd Length: 377  Bit Score: 35.12  E-value: 6.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2796891201   5 KREMDSMKQELQTVKQKVDKLEQRMDKQEEELRWLKEQMKENTEMIKAIRDNQLEQRSIQDGMRHEIANLRGEMAGIREQ 84
Cdd:COG4942    26 EAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEE 105


                  ..
gi 2796891201  85 MA 86
Cdd:COG4942   106 LA 107
 
Name Accession Description Interval E-value
XhlA pfam10779
Haemolysin XhlA; XhlA is a cell-surface associated haemolysin that lyses the two most ...
 10-57 7.95e-04

Haemolysin XhlA; XhlA is a cell-surface associated haemolysin that lyses the two most prevalent types of insect immune cells (granulocytes and plasmatocytes) as well as rabbit and horse erythrocytes. This family has had DUF1267, pfam06895, merged into it.


Pssm-ID: 402419 [Multi-domain]  Cd Length: 67  Bit Score: 35.72  E-value: 7.95e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 2796891201  10 SMKQELQTVKQKVDKLEQRMDKQEEELRWLKEQMKENTEMIKAIRDNQ 57
Cdd:pfam10779   1 EIKERLARIETKLDNLEERVDKLERKAAEAETKIKNLCEDLKKIESNQ 48
EnvC COG4942
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
 5-86 6.89e-03

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443969 [Multi-domain]  Cd Length: 377  Bit Score: 35.12  E-value: 6.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2796891201   5 KREMDSMKQELQTVKQKVDKLEQRMDKQEEELRWLKEQMKENTEMIKAIRDNQLEQRSIQDGMRHEIANLRGEMAGIREQ 84
Cdd:COG4942    26 EAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEE 105


                  ..
gi 2796891201  85 MA 86
Cdd:COG4942   106 LA 107
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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