|
Name |
Accession |
Description |
Interval |
E-value |
| ModB |
COG4149 |
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ... |
1-221 |
1.81e-89 |
|
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis
Pssm-ID: 443320 [Multi-domain] Cd Length: 223 Bit Score: 262.68 E-value: 1.81e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 1 MMDWSAFALSMQLAFSTLAVLLPLGLLAGRWLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLQSSF 80
Cdd:COG4149 3 PEDWSALWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEELF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 81 GISLTFNFTGLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEF 160
Cdd:COG4149 83 GISLVFTWTGAVLASVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEF 162
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2769530121 161 GVVLMIGGSIPGETRTLAISIYDSVQSFDLDAANTMSLALLMFSLVAVATSLWLSGRRRRK 221
Cdd:COG4149 163 GATLMFAGNIPGKTQTLPLAIYDAVEAGDYAAAHALSLILLAISFVVLLLLNLLNRRRRRR 223
|
|
| modB_ABC |
TIGR02141 |
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ... |
8-217 |
8.37e-69 |
|
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]
Pssm-ID: 273993 [Multi-domain] Cd Length: 208 Bit Score: 209.79 E-value: 8.37e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 8 ALSMQLAFSTLAVLLPLGLLAGRWLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLqSSFGISLTFN 87
Cdd:TIGR02141 1 WLSLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLL-ELFGISLVFT 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 88 FTGLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMIG 167
Cdd:TIGR02141 80 FTGAVLASVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFA 159
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2769530121 168 GSIPGETRTLAISIYDSVQSfDLDAANTMSLALLMFSLVAVATSLWLSGR 217
Cdd:TIGR02141 160 GNIPGETQTIPLAIYDAVES-DYELAHQLSLVLLAISLIVLLLVELLNKR 208
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
4-221 |
6.90e-50 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 162.01 E-value: 6.90e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 4 WSAFALSMQLAFSTLAVLLPLGLLAGRWLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLQSSFGIS 83
Cdd:PRK09421 8 WQAVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEWFGIS 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 84 LTFNFTGLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVV 163
Cdd:PRK09421 88 FAFSWRGAALAAAVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEFGAT 167
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 164 LMIGGSIPGETRTLAISIYDSVQSFDLDAAnTMSLALL--MFSLVAVATSLWLSGRRRRK 221
Cdd:PRK09421 168 ITFVSNIPGETQTIPSAMYTLIQTPGGESA-AARLCIIsiAIALASLLLSEWLARRSRKR 226
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
7-205 |
2.05e-16 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 74.24 E-value: 2.05e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 7 FALSMQLAFSTLAVLLPLGLLAGRWLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGgaspvgqwLQSSFGISLTF 86
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFG--------VLLGWGILPGL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 87 NFTGLLLASVVFnIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMI 166
Cdd:cd06261 73 GLPALILALLLI-APFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFL 151
|
170 180 190
....*....|....*....|....*....|....*....
gi 2769530121 167 GGSIPGETRTLAISIYDSVQSFDLDAANTMSLALLMFSL 205
Cdd:cd06261 152 GGGEAPGPGTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
84-212 |
8.21e-10 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 56.15 E-value: 8.21e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 84 LTFNFTGLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVV 163
Cdd:pfam00528 48 LGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLL 127
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2769530121 164 LMIGGSIP-GETRTLAISIYDSVQSFDLDAANTMSLALLMFSLVAVATSL 212
Cdd:pfam00528 128 EFLGSWPGlGLLLIEAILGYDYPEIQGPVLAAALILLLLNLLVDILQRLL 177
|
|
| ABC_perm1 |
NF038017 |
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ... |
31-201 |
1.19e-07 |
|
ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.
Pssm-ID: 411610 [Multi-domain] Cd Length: 184 Bit Score: 49.85 E-value: 1.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 31 WLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWlqssfgiSLTFNFTGLLLASVVFNIPFMLQPIQRA 110
Cdd:NF038017 22 LLALRRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGFL-------GLLYTPTAMIIAQAVLALPIVAGLTLAA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 111 FESIPRNLNEAAQVSGLSTWAIFTKVeLPLAWPGVLSAMVLTFVHTLGEFGVVLMIGGSIPGETRTLAISIYDSVQSFDL 190
Cdd:NF038017 95 VQGLDPELRLQILSLGATRWQALWTL-LKEARFALLAAVLAGFGRAISEVGAVMMVGGNIRGYTRVLTTAIVLETSKGNF 173
|
170
....*....|.
gi 2769530121 191 DAANTMSLALL 201
Cdd:NF038017 174 DLALALGIILL 184
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ModB |
COG4149 |
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ... |
1-221 |
1.81e-89 |
|
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis
Pssm-ID: 443320 [Multi-domain] Cd Length: 223 Bit Score: 262.68 E-value: 1.81e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 1 MMDWSAFALSMQLAFSTLAVLLPLGLLAGRWLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLQSSF 80
Cdd:COG4149 3 PEDWSALWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEELF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 81 GISLTFNFTGLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEF 160
Cdd:COG4149 83 GISLVFTWTGAVLASVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEF 162
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2769530121 161 GVVLMIGGSIPGETRTLAISIYDSVQSFDLDAANTMSLALLMFSLVAVATSLWLSGRRRRK 221
Cdd:COG4149 163 GATLMFAGNIPGKTQTLPLAIYDAVEAGDYAAAHALSLILLAISFVVLLLLNLLNRRRRRR 223
|
|
| modB_ABC |
TIGR02141 |
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ... |
8-217 |
8.37e-69 |
|
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]
Pssm-ID: 273993 [Multi-domain] Cd Length: 208 Bit Score: 209.79 E-value: 8.37e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 8 ALSMQLAFSTLAVLLPLGLLAGRWLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLqSSFGISLTFN 87
Cdd:TIGR02141 1 WLSLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLL-ELFGISLVFT 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 88 FTGLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMIG 167
Cdd:TIGR02141 80 FTGAVLASVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFA 159
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 2769530121 168 GSIPGETRTLAISIYDSVQSfDLDAANTMSLALLMFSLVAVATSLWLSGR 217
Cdd:TIGR02141 160 GNIPGETQTIPLAIYDAVES-DYELAHQLSLVLLAISLIVLLLVELLNKR 208
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
4-221 |
6.90e-50 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 162.01 E-value: 6.90e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 4 WSAFALSMQLAFSTLAVLLPLGLLAGRWLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLQSSFGIS 83
Cdd:PRK09421 8 WQAVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEWFGIS 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 84 LTFNFTGLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVV 163
Cdd:PRK09421 88 FAFSWRGAALAAAVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEFGAT 167
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 164 LMIGGSIPGETRTLAISIYDSVQSFDLDAAnTMSLALL--MFSLVAVATSLWLSGRRRRK 221
Cdd:PRK09421 168 ITFVSNIPGETQTIPSAMYTLIQTPGGESA-AARLCIIsiAIALASLLLSEWLARRSRKR 226
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
32-220 |
2.51e-46 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 154.14 E-value: 2.51e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 32 LARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLQSsFGISLTFNFTGLLLASVVFNIPFMLQPIQRAF 111
Cdd:COG0555 81 LVRYRFPGKRLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAP-LGIKVAFTPLGIVLAQTFVSLPFVVRTVQPVL 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 112 ESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMIGGSIPGETRTLAISIYDSVQSFDLD 191
Cdd:COG0555 160 EELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNLPMKTEILPLLIYLKLEEGDYA 239
|
170 180
....*....|....*....|....*....
gi 2769530121 192 AANTMSLALLMFSLVAVATSLWLSGRRRR 220
Cdd:COG0555 240 GATAIALVLLLISFLLLLLINLLQRRSRR 268
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
32-219 |
1.40e-37 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 136.83 E-value: 1.40e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 32 LARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLQSSFGISLT--FNFTGLLLASVVFNIPFMLQPIQR 109
Cdd:COG1178 81 LARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLNTLLRALFGLEPPdiYGLGGIILVLVLFNYPYVYLLLRA 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 110 AFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMIGGSIPgetrTLAISIYDSVQS-F 188
Cdd:COG1178 161 ALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVLGGGYT----TLTTAIYQAWLGdF 236
|
170 180 190
....*....|....*....|....*....|.
gi 2769530121 189 DLDAANTMSLALLMFSLVAVATSLWLSGRRR 219
Cdd:COG1178 237 DLGAAAALALVLLLLVLLLLLLERRLRRRRR 267
|
|
| Mo_ABC_porter |
TIGR01581 |
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively ... |
32-208 |
3.04e-35 |
|
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively weak homology compared to its neighbor clades, the molybdate (TIGR02141) and sulfate (TIGR00969) porters. Neighbor-Joining, PAM-distance phylogenetic trees support the separation of the clades in this way. Included in this group is a gene designated NifC in Clostridium pasturianum. It would be reasonable to presume that NifC acts as a molybdate porter since the most common form of nitrogenase is a molybdoenzyme. Several other sequences falling within the scope of this model are annotated as molybdate porters and one, from Halobacterium, is annotated as a sulfate porter. There is presently no experimental evidence to support annotations with this degree of specificity.
Pssm-ID: 130643 Cd Length: 225 Bit Score: 124.43 E-value: 3.04e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 32 LARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLQSSfGISLTFNFTGLLLASVVFNIPFMLQPIQRAF 111
Cdd:TIGR01581 48 LARVRFPLKKLLDTLLDLPMVLPPLVAGLALLLLFGRNGLLGPYLEAA-GIQVIFSTLGVVLAQTFVASPYYVRVARSTF 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 112 ESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMIGGSIPGETRTLAISIYDSVQSFDLD 191
Cdd:TIGR01581 127 KSVDPRYEDVARSLGAGPLETFRKITLPMARPGLLAGLVLAWARALGEFGATLMFAGSIQGKTRTLPLAIYLNIQSDNIE 206
|
170
....*....|....*..
gi 2769530121 192 AANTMSLALLMFSLVAV 208
Cdd:TIGR01581 207 AAVASALLLLVIAFLLL 223
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
4-221 |
8.40e-33 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 119.06 E-value: 8.40e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 4 WSAFALSMQLAFSTLAVLLPLGLLAGRWLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALggaspvgqwlqSSFGIS 83
Cdd:COG1177 60 LDALLNSLLIALLSTLLATVLGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLF-----------SALGLS 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 84 LTFnfTGLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVV 163
Cdd:COG1177 129 GGL--WGLILAHVVFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVIT 206
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2769530121 164 LMIGGsipGETRTLAISIYDSVQSFDLDAANTMSLALLMFSLVAVATSLWLSGRRRRK 221
Cdd:COG1177 207 LFLAG---PGVTTLPVYIYSMIRRGISPEINALSTLLILLSLLLLLLAERLRRRGERR 261
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
4-218 |
2.52e-28 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 111.41 E-value: 2.52e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 4 WSAFALSMQLAFSTLAVLLPLGLLAGRWLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALggASPVGQWLQSSFGIs 83
Cdd:COG1178 337 LRALLNSLLLALLAALLAVLLALLLAYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLGLLLLF--NRPLPLLLYGTLAI- 413
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 84 ltfnftgLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVV 163
Cdd:COG1178 414 -------LVLAYVVRFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSAT 486
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2769530121 164 LMIGgsiPGETRTLAISIYDSVQSFDLDAANTMSLALLMFSLVAVATSLWLSGRR 218
Cdd:COG1178 487 LLLR---PPGFETLAVLIYQLASSGRYGEAAALALLLVLVSLLPVLLLERLLGRR 538
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
5-188 |
7.63e-28 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 105.48 E-value: 7.63e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 5 SAFALSMQLAFSTLAVLLPLGLLAGRWLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLqSSFGISL 84
Cdd:CHL00187 55 SAYSLTLSMALIAALINGFFGLLIAWVLVRYNFPGKRLLDAAVDLPFALPTSVAGLTLATVYGDNGWIGHLL-SHLGIQI 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 85 TFNFTGLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVL 164
Cdd:CHL00187 134 VFTKLGVLLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEYGSIV 213
|
170 180
....*....|....*....|....
gi 2769530121 165 MIGGSIPGETRTLAISIYDSVQSF 188
Cdd:CHL00187 214 IISSNIPFKDLVASVLIFQSLEQY 237
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
31-221 |
3.84e-27 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 104.84 E-value: 3.84e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 31 WLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLQS----SFGISLTFNFTGLLLASVVFNIPFMLQP 106
Cdd:COG1176 93 FLARAPPRWRNLLLLLVILPFWTSFLVRTYAWIVLLGRNGLLNSLLLAlgliDEPLRLLYTEFAVVIGLVYVYLPFMVLP 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 107 IQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMIGGsipGETRTLAISIYDSV- 185
Cdd:COG1176 173 LYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGG---GKVLMIGNLIYQQFl 249
|
170 180 190
....*....|....*....|....*....|....*.
gi 2769530121 186 QSFDLDAANTMSLALLMFSLVAVATSLWLSGRRRRK 221
Cdd:COG1176 250 SALNWPLAAALAVVLLLIVLLVLLLYLRLLRRRRLL 285
|
|
| PRK10971 |
PRK10971 |
sulfate/thiosulfate ABC transporter permease CysT; |
32-206 |
3.20e-23 |
|
sulfate/thiosulfate ABC transporter permease CysT;
Pssm-ID: 182873 Cd Length: 277 Bit Score: 94.05 E-value: 3.20e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 32 LARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLqSSFGISLTFNFTGLLLASVVFNIPFMLQPIQRAF 111
Cdd:PRK10971 85 LTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGWYGEWL-AKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 112 ESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMIGGSIPGETRTLAISIYDSVQSFDLD 191
Cdd:PRK10971 164 EELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEFDYP 243
|
170
....*....|....*
gi 2769530121 192 AANTMSLALLMFSLV 206
Cdd:PRK10971 244 AASAIASVILAASLL 258
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
31-219 |
5.93e-18 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 80.18 E-value: 5.93e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 31 WLARTSFKGRTWIEAAILLPLVLPPTVMGY--------------YLLVALGGASPvgQWLQSSfgislTFNFTGLLLASV 96
Cdd:COG1175 101 LLLNRKLRGRGFFRTLFFLPWVISPVVVALiwkwlfnpdygllnALLGALGLEPI--NWLGDP-----SLALPAVIIVTV 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 97 VFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVV-LMIGGSIPGETR 175
Cdd:COG1175 174 WKGTGFNMLIFLAGLQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQVFDLVyVLTGGGPGNSTT 253
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2769530121 176 TLAISIYD-SVQSFDLDAANTMSLALLMFSLVAVATSLWLSGRRR 219
Cdd:COG1175 254 TLVLYIYQtAFQQFDFGYASAIAVVLFLIILVLTLLQLRLLRRRE 298
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
7-205 |
2.05e-16 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 74.24 E-value: 2.05e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 7 FALSMQLAFSTLAVLLPLGLLAGRWLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGgaspvgqwLQSSFGISLTF 86
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFG--------VLLGWGILPGL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 87 NFTGLLLASVVFnIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMI 166
Cdd:cd06261 73 GLPALILALLLI-APFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFL 151
|
170 180 190
....*....|....*....|....*....|....*....
gi 2769530121 167 GGSIPGETRTLAISIYDSVQSFDLDAANTMSLALLMFSL 205
Cdd:cd06261 152 GGGEAPGPGTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
|
|
| cysW |
PRK11602 |
sulfate/thiosulfate ABC transporter permease CysW; |
31-203 |
2.21e-16 |
|
sulfate/thiosulfate ABC transporter permease CysW;
Pssm-ID: 183225 Cd Length: 283 Bit Score: 75.94 E-value: 2.21e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 31 WL-ARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLQSsFGISLTFNFTGLLLASVVFNIPFMLQPIQR 109
Cdd:PRK11602 89 WLvTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDE-HNLQLMFSWPGMVLVTIFVTCPFVVRELVP 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 110 AFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMIGGSIPGETRTLAISI------YD 183
Cdd:PRK11602 168 VMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIelleqdYN 247
|
170 180
....*....|....*....|
gi 2769530121 184 SVQSFDLDAANTMSLALLMF 203
Cdd:PRK11602 248 TVGSFTAAALLTLMAIITLF 267
|
|
| PRK15050 |
PRK15050 |
2-aminoethylphosphonate transport system permease PhnU; Provisional |
32-220 |
8.18e-15 |
|
2-aminoethylphosphonate transport system permease PhnU; Provisional
Pssm-ID: 237888 [Multi-domain] Cd Length: 296 Bit Score: 71.57 E-value: 8.18e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 32 LARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLQSSFGIS---LTFNFT--GLLLASVVFNIPFMLQP 106
Cdd:PRK15050 100 LAFVPFPGASLVGRFIDTFVAFPSFLITLAFTFLYGSAGSVNIALQRLFGLEappLDFLYSpgGVILAEITFYTPFVVRP 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 107 IQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMIGGSipgETRTLAISIYDS-V 185
Cdd:PRK15050 180 LLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNEFGIVLFTGAK---DVVTLPVLIYSKaI 256
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2769530121 186 QSFDLDAANT-----MSLALLMFSLVAVATSLWLSGRRRR 220
Cdd:PRK15050 257 VDFDYPTACAiavvnLALSLGLYALYRRVNRRAGGGSRDR 296
|
|
| PhnU |
TIGR03226 |
2-aminoethylphosphonate ABC transporter, permease protein; This ABC transporter permease ... |
10-205 |
6.58e-14 |
|
2-aminoethylphosphonate ABC transporter, permease protein; This ABC transporter permease (membrane-spanning) component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238).
Pssm-ID: 274484 Cd Length: 288 Bit Score: 68.82 E-value: 6.58e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 10 SMQLAFSTLAVLLPLGLLAGRWLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLQSSFGISLT---- 85
Cdd:TIGR03226 73 TLQIAFAAAGGALVLGSLLAAILFFIPFPGAQLVGRFIDLFIAFPSFLIAFAFIFIYGSAGLLNGALMAAFAFDAPpldf 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 86 -FNFTGLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVL 164
Cdd:TIGR03226 153 lFGAGGVILAEITFFTPFVMRPLLAGFAQIDKRLLEAASILGAHGLMLARQVIFPAALPAIAAGGILCFLLTLNEFGILL 232
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 2769530121 165 MIGGSipgETRTLAISIYDS-VQSFDLDAANTMSLALLMFSL 205
Cdd:TIGR03226 233 FIGAA---GLITLPMAIYSKaILDIDLPAAAAGALIMIALSL 271
|
|
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
32-202 |
1.12e-13 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 68.20 E-value: 1.12e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 32 LARTSFKGRTWIEAAILLPLVLPPTVM--GYYLLVAlggaspvgqwlqssfGISLTFNFTGLLLASVVFNIPFMLQPIQR 109
Cdd:COG0395 101 LARFRFRGRKLLFLLILATLMIPGQVLliPLYLLFR---------------QLGLLNTYWGLILPYLAFGLPFGIFLLRQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 110 AFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMIGGSipGETRTLAISIYDSVQSFD 189
Cdd:COG0395 166 FFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWPLILLTS--PDLRTLPVGLASFQGQYG 243
|
170
....*....|...
gi 2769530121 190 LDAANTMSLALLM 202
Cdd:COG0395 244 TDWGLLMAAAVIA 256
|
|
| thiP |
TIGR01253 |
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, ... |
4-203 |
1.78e-13 |
|
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, permease protein in bacteria. The protein belongs to the larger ABC transport system. It consists of atleast three components: the inner mebrane permease; thiamine binding protein; an ATP-binding subunit. It has been experimentally demonstrated that the mutants in the various steps in the de novo synthesis of the thiamine and the biologically active form, namely thiamine pyrophosphate can be exogenously supplemented with thiamine, thiamine monophosphate (TMP) or thiamine pyrophosphate (TPP). [Transport and binding proteins, Other]
Pssm-ID: 130320 [Multi-domain] Cd Length: 519 Bit Score: 68.79 E-value: 1.78e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 4 WSAFALSMQLAFSTLAVLLPLGLLAGRWLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLvALGGASPVGQWLQSSFGIS 83
Cdd:TIGR01253 46 QHLILFSFGQAFLSALLSIFFAIFLARALFRKPFLGKKALLKLCALTFILPALVAIFGII-GIYGRQGWLATLANLFGLE 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 84 LTFN---FTGLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEF 160
Cdd:TIGR01253 125 WQFHiygLQGILIAHLFFNIPLAAQLFLQALENIPGEQRQLAAQLGLQGWHFFKFVEWPVFRQQCLPTAALIFMLCFASF 204
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2769530121 161 GVVLMIGGSipGETRTLAISIYDSVqSFDLDAANTMSLALLMF 203
Cdd:TIGR01253 205 ATVLSLGGG--PQATTIELAIYQAI-LFDFDLAKAALFALLQF 244
|
|
| thiP |
PRK09433 |
thiamine transporter membrane protein; Reviewed |
30-216 |
3.64e-13 |
|
thiamine transporter membrane protein; Reviewed
Pssm-ID: 181853 [Multi-domain] Cd Length: 525 Bit Score: 67.55 E-value: 3.64e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 30 RWLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWLQsSFGISLTFNFTGL---LLASVVFNIPFMLQP 106
Cdd:PRK09433 69 RALYRRRFPGRGLLLRLCAMTLVLPVLVAVFGLLSVYGRSGWLAQLLQ-ALGLEWPFSIYGLqgiLLAHVFFNLPLATRL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 107 IQRAFESIP---RNLneAAQVsGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMIGGSiPGETrTLAISIYD 183
Cdd:PRK09433 148 LLQALESIPaeqRQL--AAQL-GMRGWQFFRLVEWPYLRRQLPPVAALIFMLCFTSFATVLTLGGG-PKAT-TIELAIYQ 222
|
170 180 190
....*....|....*....|....*....|....*
gi 2769530121 184 SVqSFDLDAANTMSLALL--MFSLVAVATSLWLSG 216
Cdd:PRK09433 223 AL-SFDFDLARAALLALLqmVLCLGLVLLSQRLSK 256
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
32-219 |
5.71e-11 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 61.23 E-value: 5.71e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 32 LARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWlqssFGISLTFNFTGLLLASVVFNIPFMLQPIQRAF 111
Cdd:TIGR03262 81 LTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGL----LGGFSIYGFWGIVIGEVFYTFPHALMILVTAL 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 112 ESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMIGGSIPgetrTLAISIYDSV---QSF 188
Cdd:TIGR03262 157 SLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGGDYN----VLATDIYKQVigqQNF 232
|
170 180 190
....*....|....*....|....*....|.
gi 2769530121 189 DLDAanTMSLALLMFSLVAVATSLWLSGRRR 219
Cdd:TIGR03262 233 PMGA--VVGVLLLLPALLAFGIDRAIQRRQR 261
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
84-212 |
8.21e-10 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 56.15 E-value: 8.21e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 84 LTFNFTGLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVV 163
Cdd:pfam00528 48 LGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLL 127
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2769530121 164 LMIGGSIP-GETRTLAISIYDSVQSFDLDAANTMSLALLMFSLVAVATSL 212
Cdd:pfam00528 128 EFLGSWPGlGLLLIEAILGYDYPEIQGPVLAAALILLLLNLLVDILQRLL 177
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
32-220 |
1.39e-08 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 53.45 E-value: 1.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 32 LARTSFKGRTWIEAAILLPLVLPPTVMGYYLLValggaspvgqwLQSSFGISLtfNFTGLLLASVVFNIPFMLQPIQRAF 111
Cdd:PRK09500 84 LYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLV-----------LFMLLGIQL--GFWSLLFAHITFCLPFVVVTVYSRL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 112 ESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMIGGSipgETRTLAISIYDSVQSFDLD 191
Cdd:PRK09500 151 KGFDVRMLEAAKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSSFVTGP---SYEILPLKIYSMVKVGVSP 227
|
170 180
....*....|....*....|....*....
gi 2769530121 192 AANTMSLALLMFSLVAVATSLWLSGRRRR 220
Cdd:PRK09500 228 EVNALATILLVLSLVLVILSQLLARDKTK 256
|
|
| MalG |
COG3833 |
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ... |
32-182 |
2.66e-08 |
|
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];
Pssm-ID: 443045 [Multi-domain] Cd Length: 282 Bit Score: 52.85 E-value: 2.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 32 LARTSFKGRTWIEAAILLpLVLPPTVMG----YYLLVALGgaspvgqwlqssfgisLTFNFTGLLLASVVFNIPFMLQPI 107
Cdd:COG3833 100 FSRFRFKGRKAGLLALLL-LQMFPAFLAlvalYLLLSALG----------------LLNTLLGLILVYLGGAIPFNTWLM 162
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2769530121 108 QRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGVVLMIGGSipGETRTLAISIY 182
Cdd:COG3833 163 KGYFDTIPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASVLLRS--PENYTLAVGLY 235
|
|
| phosphate_pstC |
TIGR02138 |
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ... |
72-203 |
8.85e-08 |
|
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273992 [Multi-domain] Cd Length: 295 Bit Score: 51.50 E-value: 8.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 72 VGQWLQSSFGISLTFNFtGLLLASVVFNI---PFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSA 148
Cdd:TIGR02138 133 FQPFLGSNLGLIPLFGG-PILTAGIVLAImilPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGA 211
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2769530121 149 MVLTFVHTLGEFGVVLMIGGSI----------PGETRTLAISIYDSVQSFDLDAANT-MSLALLMF 203
Cdd:TIGR02138 212 VVLGLGRALGETMAVTMVIGNVfpisplslfdPGTTITSLIANQFGEASGGSVHTSAlFALGLVLF 277
|
|
| ABC_perm1 |
NF038017 |
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ... |
31-201 |
1.19e-07 |
|
ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.
Pssm-ID: 411610 [Multi-domain] Cd Length: 184 Bit Score: 49.85 E-value: 1.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 31 WLARTSFKGRTWIEAAILLPLVLPPTVMGYYLLVALGGASPVGQWlqssfgiSLTFNFTGLLLASVVFNIPFMLQPIQRA 110
Cdd:NF038017 22 LLALRRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGFL-------GLLYTPTAMIIAQAVLALPIVAGLTLAA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 111 FESIPRNLNEAAQVSGLSTWAIFTKVeLPLAWPGVLSAMVLTFVHTLGEFGVVLMIGGSIPGETRTLAISIYDSVQSFDL 190
Cdd:NF038017 95 VQGLDPELRLQILSLGATRWQALWTL-LKEARFALLAAVLAGFGRAISEVGAVMMVGGNIRGYTRVLTTAIVLETSKGNF 173
|
170
....*....|.
gi 2769530121 191 DAANTMSLALL 201
Cdd:NF038017 174 DLALALGIILL 184
|
|
| potB |
PRK09497 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
82-169 |
1.73e-05 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 181910 Cd Length: 285 Bit Score: 44.68 E-value: 1.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 82 ISLTFNFTGLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFG 161
Cdd:PRK09497 144 IRIMFTESAVIIGLVYILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMGMFY 223
|
....*...
gi 2769530121 162 VVLMIGGS 169
Cdd:PRK09497 224 VSDLLGGA 231
|
|
| OpuBB |
COG1174 |
ABC-type proline/glycine betaine transport system, permease component [Amino acid transport ... |
110-152 |
6.66e-05 |
|
ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 440787 [Multi-domain] Cd Length: 212 Bit Score: 42.35 E-value: 6.66e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2769530121 110 AFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWP----GVLSAMVLT 152
Cdd:COG1174 104 GLRSVDPAVVEAARGMGMTPWQRLWRVELPLALPvilaGIRTAAVQN 150
|
|
| malG |
PRK10998 |
maltose ABC transporter permease MalG; |
10-162 |
8.42e-04 |
|
maltose ABC transporter permease MalG;
Pssm-ID: 182891 Cd Length: 296 Bit Score: 39.69 E-value: 8.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2769530121 10 SMQLAFSTLAVLLPLGLLAGRWLARTSFKGRTWIEAAILLPLVLPPT---VMGYYLLVALGGASPVgqwlqssfgisLTF 86
Cdd:PRK10998 88 SVKVAGITAIGIVALSTTCAYAFARMRFKGKATLLKGMLIFQMFPAVlslVALYALFDRLGQYIPF-----------IGL 156
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2769530121 87 NFTGLLLASVVFNIPFMLQPIQRAFESIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVLSAMVLTFVHTLGEFGV 162
Cdd:PRK10998 157 NTHGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPV 232
|
|
| COG4986 |
COG4986 |
ABC-type anion transport system, duplicated permease component [Inorganic ion transport and ... |
113-146 |
3.96e-03 |
|
ABC-type anion transport system, duplicated permease component [Inorganic ion transport and metabolism];
Pssm-ID: 444010 [Multi-domain] Cd Length: 576 Bit Score: 37.90 E-value: 3.96e-03
10 20 30
....*....|....*....|....*....|....
gi 2769530121 113 SIPRNLNEAAQVSGLSTWAIFTKVELPLAWPGVL 146
Cdd:COG4986 158 TVPRDLDEAARIFRLSGWQRFWRLELPFAMPGLV 191
|
|
| |
