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Conserved domains on  [gi|2627930423|ref|WP_320908112|]
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MULTISPECIES: Por secretion system protein [Bacteroides]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 17352027)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

CATH:  3.80.10.10
Gene Ontology:  GO:0005515
SCOP:  4003523

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
836-1113 2.65e-10

Leucine-rich repeat (LRR) protein [Transcription];


:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 64.18  E-value: 2.65e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  836 LVDKVINSTKTSIQGTPTDTKIIKIYTDAAKIKEISLAYCDYLTGVDLSRCTALEILSIKESSKIATITYPENIATITSL 915
Cdd:COG4886      1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  916 TIENSNIRNLDIHDWSGLKNLNYapSGTATIvlpDETENLETVIL--KKLSSKTIDLSKYTNLTSLEATNNSsLEELDVN 993
Cdd:COG4886     81 LLSLLLLGLTDLGDLTNLTELDL--SGNEEL---SNLTNLESLDLsgNQLTDLPEELANLTNLKELDLSNNQ-LTDLPEP 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  994 --TCSKLSKLICkSNTKLVTLTLPTVK-TALTELNCEYTALASI--NLKEYTNLQMLNCSGIKEATLPENAATMTSLT-- 1066
Cdd:COG4886    155 lgNLTNLKSLDL-SNNQLTDLPEELGNlTNLKELDLSNNQITDLpePLGNLTNLEELDLSGNQLTDLPEPLANLTNLEtl 233
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*....
gi 2627930423 1067 -CKENGLKTL-DISSYINLTYLDCSYNELTKILVPESLNQILEIDCSYN 1113
Cdd:COG4886    234 dLSNNQLTDLpELGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNN 282
LRR super family cl34836
Leucine-rich repeat (LRR) protein [Transcription];
394-715 7.77e-10

Leucine-rich repeat (LRR) protein [Transcription];


The actual alignment was detected with superfamily member COG4886:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 62.64  E-value: 7.77e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  394 LVDKVINSAKTSIQGTPAGTKNIKIYADAAKIKEVSLAYCDYLTGVDLSKCTALQTLSIKESSKITSIAYPEDITTLKNL 473
Cdd:COG4886      1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  474 TIDNSSIKNIDLHNWSGLKNLKYSPYGASTivlpdEAENLENIVLSKLSLKAI--DLNKYVNLASLEVtSHSALETL--D 549
Cdd:COG4886     81 LLSLLLLGLTDLGDLTNLTELDLSGNEELS-----NLTNLESLDLSGNQLTDLpeELANLTNLKELDL-SNNQLTDLpeP 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  550 VGKCNKLTKLICkRDTKLATlILPEIK--TTLTELDCEYTALTAI--DLKEYSKLQVLNCSGIKETILPEDPSTLTSLT- 624
Cdd:COG4886    155 LGNLTNLKSLDL-SNNQLTD-LPEELGnlTNLKELDLSNNQITDLpePLGNLTNLEELDLSGNQLTDLPEPLANLTNLEt 232
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  625 --CKENGLKVL-DISSCTNLTYLDCSYNELTEIKVPGNPNQDINIDCSYNYLFLPNFPEGEKIDLTYMDQREKVSQYTLS 701
Cdd:COG4886    233 ldLSNNQLTDLpELGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLE 312
                          330
                   ....*....|....
gi 2627930423  702 ERYTTNDIIDLSEL 715
Cdd:COG4886    313 LLILLLLLTTLLLL 326
LRR super family cl34836
Leucine-rich repeat (LRR) protein [Transcription];
83-229 3.70e-04

Leucine-rich repeat (LRR) protein [Transcription];


The actual alignment was detected with superfamily member COG4886:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 44.54  E-value: 3.70e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423   83 GDANKLKKIEISSNKLLKV-LDFSKCLALTELSCSSCQgVTEIILPSSTENQLTKINCRYLNLASFDAS--KCAKLKTLA 159
Cdd:COG4886    110 SNLTNLESLDLSGNQLTDLpEELANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDLSNNQLTDLPEElgNLTNLKELD 188
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2627930423  160 LSNADATLKTLVLPENTDiLNDLTLQQCGLTTL--DISKYTNLTNLDCTYNFLTSIQTPNSDKNL-SVDCSYN 229
Cdd:COG4886    189 LSNNQITDLPEPLGNLTN-LEELDLSGNQLTDLpePLANLTNLETLDLSNNQLTDLPELGNLTNLeELDLSNN 260
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
836-1113 2.65e-10

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 64.18  E-value: 2.65e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  836 LVDKVINSTKTSIQGTPTDTKIIKIYTDAAKIKEISLAYCDYLTGVDLSRCTALEILSIKESSKIATITYPENIATITSL 915
Cdd:COG4886      1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  916 TIENSNIRNLDIHDWSGLKNLNYapSGTATIvlpDETENLETVIL--KKLSSKTIDLSKYTNLTSLEATNNSsLEELDVN 993
Cdd:COG4886     81 LLSLLLLGLTDLGDLTNLTELDL--SGNEEL---SNLTNLESLDLsgNQLTDLPEELANLTNLKELDLSNNQ-LTDLPEP 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  994 --TCSKLSKLICkSNTKLVTLTLPTVK-TALTELNCEYTALASI--NLKEYTNLQMLNCSGIKEATLPENAATMTSLT-- 1066
Cdd:COG4886    155 lgNLTNLKSLDL-SNNQLTDLPEELGNlTNLKELDLSNNQITDLpePLGNLTNLEELDLSGNQLTDLPEPLANLTNLEtl 233
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*....
gi 2627930423 1067 -CKENGLKTL-DISSYINLTYLDCSYNELTKILVPESLNQILEIDCSYN 1113
Cdd:COG4886    234 dLSNNQLTDLpELGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNN 282
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
394-715 7.77e-10

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 62.64  E-value: 7.77e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  394 LVDKVINSAKTSIQGTPAGTKNIKIYADAAKIKEVSLAYCDYLTGVDLSKCTALQTLSIKESSKITSIAYPEDITTLKNL 473
Cdd:COG4886      1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  474 TIDNSSIKNIDLHNWSGLKNLKYSPYGASTivlpdEAENLENIVLSKLSLKAI--DLNKYVNLASLEVtSHSALETL--D 549
Cdd:COG4886     81 LLSLLLLGLTDLGDLTNLTELDLSGNEELS-----NLTNLESLDLSGNQLTDLpeELANLTNLKELDL-SNNQLTDLpeP 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  550 VGKCNKLTKLICkRDTKLATlILPEIK--TTLTELDCEYTALTAI--DLKEYSKLQVLNCSGIKETILPEDPSTLTSLT- 624
Cdd:COG4886    155 LGNLTNLKSLDL-SNNQLTD-LPEELGnlTNLKELDLSNNQITDLpePLGNLTNLEELDLSGNQLTDLPEPLANLTNLEt 232
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  625 --CKENGLKVL-DISSCTNLTYLDCSYNELTEIKVPGNPNQDINIDCSYNYLFLPNFPEGEKIDLTYMDQREKVSQYTLS 701
Cdd:COG4886    233 ldLSNNQLTDLpELGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLE 312
                          330
                   ....*....|....
gi 2627930423  702 ERYTTNDIIDLSEL 715
Cdd:COG4886    313 LLILLLLLTTLLLL 326
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
457-654 2.07e-07

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 55.47  E-value: 2.07e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  457 KITSIAY--PEDITTLknlTIDNSSIKNIDLHNWSGLKNLKYSPYGASTI--VLPDEAENLEnivlsklslkaIDLNKYV 532
Cdd:PRK15370   189 GLTTIPAciPEQITTL---ILDNNELKSLPENLQGNIKTLYANSNQLTSIpaTLPDTIQEME-----------LSINRIT 254
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  533 nlaslEVTSH--SALETLDVgKCNKLTKLICKRDTKLATL--------ILPE-IKTTLTELDCEYTALTAI------DLK 595
Cdd:PRK15370   255 -----ELPERlpSALQSLDL-FHNKISCLPENLPEELRYLsvydnsirTLPAhLPSGITHLNVQSNSLTALpetlppGLK 328
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2627930423  596 EYS---------------KLQVLNCSGIKETILPED-PSTLTSLTCKENGLKVLDISSCTNLTYLDCSYNELTEI 654
Cdd:PRK15370   329 TLEagenaltslpaslppELQVLDVSKNQITVLPETlPPTITTLDVSRNALTNLPENLPAALQIMQASRNNLVRL 403
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
899-1102 7.42e-06

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 50.47  E-value: 7.42e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  899 KIATITY--PENIatiTSLTIENSNIRNLDIHDWSGLKNLnYAPSGTATIV---LPDETENLE------TVILKKLSS-- 965
Cdd:PRK15370   189 GLTTIPAciPEQI---TTLILDNNELKSLPENLQGNIKTL-YANSNQLTSIpatLPDTIQEMElsinriTELPERLPSal 264
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  966 KTIDLSkYTNLTSLEATNNSSLEELDV--NTCSKLSKLICKSNTKLV----TLT-LP-TVKTALTELNCEYTALASINLK 1037
Cdd:PRK15370   265 QSLDLF-HNKISCLPENLPEELRYLSVydNSIRTLPAHLPSGITHLNvqsnSLTaLPeTLPPGLKTLEAGENALTSLPAS 343
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2627930423 1038 EYTNLQMLNCSGIKEATLPEN-AATMTSLTCKENGLKTLDISSYINLTYLDCSYNELTKIlvPESL 1102
Cdd:PRK15370   344 LPPELQVLDVSKNQITVLPETlPPTITTLDVSRNALTNLPENLPAALQIMQASRNNLVRL--PESL 407
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
83-229 3.70e-04

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 44.54  E-value: 3.70e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423   83 GDANKLKKIEISSNKLLKV-LDFSKCLALTELSCSSCQgVTEIILPSSTENQLTKINCRYLNLASFDAS--KCAKLKTLA 159
Cdd:COG4886    110 SNLTNLESLDLSGNQLTDLpEELANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDLSNNQLTDLPEElgNLTNLKELD 188
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2627930423  160 LSNADATLKTLVLPENTDiLNDLTLQQCGLTTL--DISKYTNLTNLDCTYNFLTSIQTPNSDKNL-SVDCSYN 229
Cdd:COG4886    189 LSNNQITDLPEPLGNLTN-LEELDLSGNQLTDLpePLANLTNLETLDLSNNQLTDLPELGNLTNLeELDLSNN 260
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
836-1113 2.65e-10

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 64.18  E-value: 2.65e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  836 LVDKVINSTKTSIQGTPTDTKIIKIYTDAAKIKEISLAYCDYLTGVDLSRCTALEILSIKESSKIATITYPENIATITSL 915
Cdd:COG4886      1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  916 TIENSNIRNLDIHDWSGLKNLNYapSGTATIvlpDETENLETVIL--KKLSSKTIDLSKYTNLTSLEATNNSsLEELDVN 993
Cdd:COG4886     81 LLSLLLLGLTDLGDLTNLTELDL--SGNEEL---SNLTNLESLDLsgNQLTDLPEELANLTNLKELDLSNNQ-LTDLPEP 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  994 --TCSKLSKLICkSNTKLVTLTLPTVK-TALTELNCEYTALASI--NLKEYTNLQMLNCSGIKEATLPENAATMTSLT-- 1066
Cdd:COG4886    155 lgNLTNLKSLDL-SNNQLTDLPEELGNlTNLKELDLSNNQITDLpePLGNLTNLEELDLSGNQLTDLPEPLANLTNLEtl 233
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*....
gi 2627930423 1067 -CKENGLKTL-DISSYINLTYLDCSYNELTKILVPESLNQILEIDCSYN 1113
Cdd:COG4886    234 dLSNNQLTDLpELGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNN 282
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
394-715 7.77e-10

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 62.64  E-value: 7.77e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  394 LVDKVINSAKTSIQGTPAGTKNIKIYADAAKIKEVSLAYCDYLTGVDLSKCTALQTLSIKESSKITSIAYPEDITTLKNL 473
Cdd:COG4886      1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  474 TIDNSSIKNIDLHNWSGLKNLKYSPYGASTivlpdEAENLENIVLSKLSLKAI--DLNKYVNLASLEVtSHSALETL--D 549
Cdd:COG4886     81 LLSLLLLGLTDLGDLTNLTELDLSGNEELS-----NLTNLESLDLSGNQLTDLpeELANLTNLKELDL-SNNQLTDLpeP 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  550 VGKCNKLTKLICkRDTKLATlILPEIK--TTLTELDCEYTALTAI--DLKEYSKLQVLNCSGIKETILPEDPSTLTSLT- 624
Cdd:COG4886    155 LGNLTNLKSLDL-SNNQLTD-LPEELGnlTNLKELDLSNNQITDLpePLGNLTNLEELDLSGNQLTDLPEPLANLTNLEt 232
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  625 --CKENGLKVL-DISSCTNLTYLDCSYNELTEIKVPGNPNQDINIDCSYNYLFLPNFPEGEKIDLTYMDQREKVSQYTLS 701
Cdd:COG4886    233 ldLSNNQLTDLpELGNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLE 312
                          330
                   ....*....|....
gi 2627930423  702 ERYTTNDIIDLSEL 715
Cdd:COG4886    313 LLILLLLLTTLLLL 326
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
457-654 2.07e-07

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 55.47  E-value: 2.07e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  457 KITSIAY--PEDITTLknlTIDNSSIKNIDLHNWSGLKNLKYSPYGASTI--VLPDEAENLEnivlsklslkaIDLNKYV 532
Cdd:PRK15370   189 GLTTIPAciPEQITTL---ILDNNELKSLPENLQGNIKTLYANSNQLTSIpaTLPDTIQEME-----------LSINRIT 254
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  533 nlaslEVTSH--SALETLDVgKCNKLTKLICKRDTKLATL--------ILPE-IKTTLTELDCEYTALTAI------DLK 595
Cdd:PRK15370   255 -----ELPERlpSALQSLDL-FHNKISCLPENLPEELRYLsvydnsirTLPAhLPSGITHLNVQSNSLTALpetlppGLK 328
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2627930423  596 EYS---------------KLQVLNCSGIKETILPED-PSTLTSLTCKENGLKVLDISSCTNLTYLDCSYNELTEI 654
Cdd:PRK15370   329 TLEagenaltslpaslppELQVLDVSKNQITVLPETlPPTITTLDVSRNALTNLPENLPAALQIMQASRNNLVRL 403
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
899-1102 7.42e-06

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 50.47  E-value: 7.42e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  899 KIATITY--PENIatiTSLTIENSNIRNLDIHDWSGLKNLnYAPSGTATIV---LPDETENLE------TVILKKLSS-- 965
Cdd:PRK15370   189 GLTTIPAciPEQI---TTLILDNNELKSLPENLQGNIKTL-YANSNQLTSIpatLPDTIQEMElsinriTELPERLPSal 264
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  966 KTIDLSkYTNLTSLEATNNSSLEELDV--NTCSKLSKLICKSNTKLV----TLT-LP-TVKTALTELNCEYTALASINLK 1037
Cdd:PRK15370   265 QSLDLF-HNKISCLPENLPEELRYLSVydNSIRTLPAHLPSGITHLNvqsnSLTaLPeTLPPGLKTLEAGENALTSLPAS 343
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2627930423 1038 EYTNLQMLNCSGIKEATLPEN-AATMTSLTCKENGLKTLDISSYINLTYLDCSYNELTKIlvPESL 1102
Cdd:PRK15370   344 LPPELQVLDVSKNQITVLPETlPPTITTLDVSRNALTNLPENLPAALQIMQASRNNLVRL--PESL 407
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
83-229 3.70e-04

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 44.54  E-value: 3.70e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423   83 GDANKLKKIEISSNKLLKV-LDFSKCLALTELSCSSCQgVTEIILPSSTENQLTKINCRYLNLASFDAS--KCAKLKTLA 159
Cdd:COG4886    110 SNLTNLESLDLSGNQLTDLpEELANLTNLKELDLSNNQ-LTDLPEPLGNLTNLKSLDLSNNQLTDLPEElgNLTNLKELD 188
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2627930423  160 LSNADATLKTLVLPENTDiLNDLTLQQCGLTTL--DISKYTNLTNLDCTYNFLTSIQTPNSDKNL-SVDCSYN 229
Cdd:COG4886    189 LSNNQITDLPEPLGNLTN-LEELDLSGNQLTDLpePLANLTNLETLDLSNNQLTDLPELGNLTNLeELDLSNN 260
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
823-1109 5.27e-04

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 44.15  E-value: 5.27e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  823 DNTTIQIDWGDGNLVDKVINSTKTSIQGTPTDTKIIKIYTDAAKIKEISLAYCDyltgvDLSRCTALEILSIkESSKIAT 902
Cdd:COG4886     54 SLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-----ELSNLTNLESLDL-SGNQLTD 127
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  903 ItyPENIATITSLT---IENSNIRNL--DIHDWSGLKNLNYapSGTATIVLPDETE---NLETVILK--KLSSKTIDLSK 972
Cdd:COG4886    128 L--PEELANLTNLKeldLSNNQLTDLpePLGNLTNLKSLDL--SNNQLTDLPEELGnltNLKELDLSnnQITDLPEPLGN 203
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  973 YTNLTSLEATNN------------SSLEELDVN-----------TCSKLSKLICkSNTKLVTLTLPTVKTALTELNCEYT 1029
Cdd:COG4886    204 LTNLEELDLSGNqltdlpeplanlTNLETLDLSnnqltdlpelgNLTNLEELDL-SNNQLTDLPPLANLTNLKTLDLSNN 282
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423 1030 ALASINLKEYTNLQMLNCSGIKEATLPENAATMTSLTCKENGLKTLDISSYINLTYLDCSYNELTKILVPESLNQILEID 1109
Cdd:COG4886    283 QLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLL 362
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
25-229 4.43e-03

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 41.07  E-value: 4.43e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423   25 DEPIINMTCTAGKISFKLYATEETVFQVDFGEGAIEQTVKTTGTAVNGSASGTSVNVYGDANKLKKIEISSNKLLKVLDF 104
Cdd:COG4886     13 LLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDL 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2627930423  105 SKCLALTELSCSSCQGVTEIilpssteNQLTKINCRYLNLASFDA--SKCAKLKTLALSNADatLKTL--VLPENTDiLN 180
Cdd:COG4886     93 GDLTNLTELDLSGNEELSNL-------TNLESLDLSGNQLTDLPEelANLTNLKELDLSNNQ--LTDLpePLGNLTN-LK 162
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|...
gi 2627930423  181 DLTLQQCGLTTLD--ISKYTNLTNLDCTYNFLTSIQTPNSD-KNL-SVDCSYN 229
Cdd:COG4886    163 SLDLSNNQLTDLPeeLGNLTNLKELDLSNNQITDLPEPLGNlTNLeELDLSGN 215
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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