|
Name |
Accession |
Description |
Interval |
E-value |
| MglC |
COG4211 |
ABC-type glucose/galactose transport system, permease component [Carbohydrate transport and ... |
211-560 |
1.69e-155 |
|
ABC-type glucose/galactose transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 443358 Cd Length: 336 Bit Score: 447.80 E-value: 1.69e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 211 NDYIYKFKLSKFFLDNGLYLAILVFFIVCIILAPisgsgNLLSLPNIFTILEQSSTRMFYALGVAGLILLAGTDLSVGRM 290
Cdd:COG4211 1 EKKIKKKKIKNFLLNNAIYIVLLLLIIAIIIINP-----NFLSLRNIRNILTQSSTRMIIALGVAGLIVTQGTDLSAGRM 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 291 VALGAVVTGLVLHPGQNIVTFFgmgpWDFTAIPmavrVIMALFSSVFLCVLFSAFAGVFSARLKIHPFISTLATQLIIYG 370
Cdd:COG4211 76 VGLAAVISASLLQSGDYAGKFF----PNLPELP----IIVPILIAIAIGALFGLINGFFVAKLKVPPFIATLGTMLIVYG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 371 LLFFGTS---GTPVGSIDSGIKDVFGGRWVLGVingelVTFPKLIIPAAIAIVVAWFIWNKTTFGKNMYAVGGNAEAASV 447
Cdd:COG4211 148 INSIYTDrpgAQPIGGLDESFTNFAQGSINIGG-----FGIPYLIIYAIIVIVIMWFIWNKTKFGKNMYAVGGNPEAAEV 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 448 SGISVFKVTLGVFIMAGIFYGFGAFFEAFK-ANASAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVLGVIIFTSLTYC 526
Cdd:COG4211 223 SGVNVFKTLIIVYALAGALYGFAGFLEAARtGSATNNYGNGYELDAIAACVVGGVSFSGGIGKISGVVIGVLIFTVINYG 302
|
330 340 350
....*....|....*....|....*....|....
gi 2540495687 527 LTFLGIDTNLQFVFKGFIIIAAVALDSIKYLKRK 560
Cdd:COG4211 303 LTFIGVNPYWQYIIKGLIIIAAVALDIRKYLKKK 336
|
|
| mglC |
PRK09478 |
galactose/methyl galactoside ABC transporter permease MglC; |
216-560 |
7.77e-95 |
|
galactose/methyl galactoside ABC transporter permease MglC;
Pssm-ID: 181892 [Multi-domain] Cd Length: 336 Bit Score: 292.75 E-value: 7.77e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 216 KFKLSKFFLDNGLYLAILVFFIVCIILAPisgsgNLLSLPNIFTILEQSSTRMFYALGVAGLILLAGTDLSVGRMVALGA 295
Cdd:PRK09478 6 KKSFLTYLKEGGIYVVLLVLLAIIIIQDP-----TFLSLLNLSNILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 296 VVTGLVLHPGQNIVTFFGmgpwDFTAIPMAVRVIMAlfssVFLCVLFSAFAGVFSARLKIHPFISTLATQLIIYGL--LF 373
Cdd:PRK09478 81 VVAATLLQSMDNANKVFP----ELATMPIALVILIV----CAIGAVIGLINGLIIAYLNVTPFIATLGTMIIVYGInsLY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 374 FGTSG-TPVGSIDSGIKDVFGGRWVLGVIngelvTFPKLIIPAAIAIVVAWFIWNKTTFGKNMYAVGGNAEAASVSGISV 452
Cdd:PRK09478 153 YDFVGaSPISGFDSGFSTFAQGFVALGSF-----RLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKVSGVNV 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 453 FKVTLGVFIMAGIFYGFGAFFEAFK-ANASAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVLGVIIFTSLTYCLTFLG 531
Cdd:PRK09478 228 PLNLLMIYALSGVFYAFGGMLEAGRiGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVINYGLTYIG 307
|
330 340
....*....|....*....|....*....
gi 2540495687 532 IDTNLQFVFKGFIIIAAVALDSIKYLKRK 560
Cdd:PRK09478 308 VNPYWQYIIKGAIIIFAVALDSLKYARKK 336
|
|
| TM_PBP1_transp_AraH_like |
cd06579 |
Transmembrane subunit (TM) of Escherichia coli AraH and related proteins. E. coli AraH is the ... |
264-552 |
2.44e-74 |
|
Transmembrane subunit (TM) of Escherichia coli AraH and related proteins. E. coli AraH is the TM of a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of the monosaccharide arabinose. This group also contains E. coli RbsC, AlsC, and MglC, which are TMs of other monosaccharide transporters, the ribose transporter, the D-allose transporter and the galactose transporter, respectively. The D-allose transporter may also be involved in low affinity ribose transport. These transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Proteins in this subgroup have a single TM which homodimerizes to generate the transmembrane pore.
Pssm-ID: 119321 [Multi-domain] Cd Length: 263 Bit Score: 236.92 E-value: 2.44e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 264 SSTRMFYALGVAGLILLAGTDLSVGRMVALGAVVTGLVLHPGqnivtffGMGPWdfTAIPMAVrvimalfssvFLCVLFS 343
Cdd:cd06579 1 AAVLGILALGMTLVIITGGIDLSVGSVAALSAVVAALLLVNA-------GLPIP--LAILAAL----------AVGALIG 61
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 344 AFAGVFSARLKIHPFISTLATQLIIYGLLFFGTSGTPVGSIDSGIKDVFGGRWVLGVingelvtfPKLIIPAAIAIVVAW 423
Cdd:cd06579 62 LLNGLLVAYLRIPPFIVTLGTMFILRGLALLITGGRPISGLPPLFSFFLGGGLILGI--------PVPVLIALAVALVAW 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 424 FIWNKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYGFGAFFEAFKAN-ASAGTGQGYELDAIAACVVGGIS 502
Cdd:cd06579 134 FLLRRTRFGRYLYAVGGNPEAARLSGINVRRVKILAYVLSGLLAGLAGILLAARLGsAQPTAGNGYELDAIAAVVLGGTS 213
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2540495687 503 FNGGIGKIGGAVLGVIIFTSLTYCLTFLGIDTNLQFVFKGFIIIAAVALD 552
Cdd:cd06579 214 LTGGRGSVLGTLLGALLLGVLNNGLNLLGVSSFWQQIVKGAILLLAVALD 263
|
|
| GguB |
NF040906 |
sugar ABC transporter permease; |
232-560 |
7.45e-34 |
|
sugar ABC transporter permease;
Pssm-ID: 468841 [Multi-domain] Cd Length: 375 Bit Score: 132.20 E-value: 7.45e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 232 ILVFFIVCIILAPISGSGNLLSLPNIFTILEQSSTRMFYALGVAgLILLAG-TDLSVGRMVAL-GAVVTGLVLHPGqniv 309
Cdd:NF040906 7 MLIALVAIVVLFQILTGGILLRPLNVTNLILQNSYILILAIGML-LVIIAGhIDLSVGSVVAFvGAVAAVLMVNWG---- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 310 tffgmgpwdftaIPMAVRVIMALFssvfLCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFGTSGTPVG------- 382
Cdd:NF040906 82 ------------MPWWLAVLLCLL----VGALIGAWQGFWVAYVGIPAFIVTLAGMLVFRGLTLVVLGGQSIGpfpdgfq 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 383 SIDSG-IKDVFGGR------WVLGVI-------------------NGELVTFPKLIIP-AAIAIVVAWFIW--------- 426
Cdd:NF040906 146 KISSGfLPDLFGGTglhlltLLLGVLaaaalvwsqlrgrrrrikyGLEVEPMALFIAKlVLIAAAILFFTYllasyrglp 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 427 -----------------NKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYGF-GAFFEAFKANASAGTGQGY 488
Cdd:NF040906 226 nvliilgvlilvysfvtNRTVIGRHIYAVGGNEKAAKLSGIKTKRVTFLVFVNMGVLAALaGLVFAARLNSATPKAGNGF 305
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2540495687 489 ELDAIAACVVGGISFNGGIGKIGGAVLGVIIFTSLTYCLTFLGIDTNLQFVFKGFIIIAAVALDSikYLKRK 560
Cdd:NF040906 306 ELDAIAACFIGGASASGGVGTVVGAIIGALVMGVLNNGMSILGIGIDWQQVIKGLVLLAAVAFDV--YNKRK 375
|
|
| BPD_transp_2 |
pfam02653 |
Branched-chain amino acid transport system / permease component; This is a large family mainly ... |
256-549 |
3.81e-28 |
|
Branched-chain amino acid transport system / permease component; This is a large family mainly comprising high-affinity branched-chain amino acid transporter proteins such as E. coli LivH and LivM, both of which are form the LIV-I transport system. Also found with in this family are proteins from the galactose transport system permease and a ribose transport system.
Pssm-ID: 396977 [Multi-domain] Cd Length: 269 Bit Score: 113.51 E-value: 3.81e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 256 NIFTILEQSSTRMFYALGVAGLILLAGT-DLSVGRMVALGAVVTGLVLHpgqnivtFFGMGPWdftaipmavrviMALFS 334
Cdd:pfam02653 1 NILNILTLASIYAIAALGLTLIYGIAGViNLGHGGFMMLGAYVAAMLLN-------LLGPGLW------------LALPV 61
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 335 SVFLCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFGtsgtpVGSIDSGIKDVFGGRWVLGVInGELVTFPKLIIP 414
Cdd:pfam02653 62 GILVGAAVGLLIGILTLRLKINEVIITLLLNLAALGLALFL-----VTGILGGEGGTSGITGPSGFP-GAFLSFAFAFIF 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 415 --AAIAIVVAWFIWNKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYGFGAFFEAFK--ANASAGTGQGYEL 490
Cdd:pfam02653 136 llALLLVLALWLLLYRTKFGRALRAVGENEEAARAAGINVKKLKLLTFVISGALAGLAGALLALYtgVVPPSNFGVGLGL 215
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 491 DAIAACVVggisfnGGIGKIGGAVLGVIIF-TSLTYCLTFLGIDTNLQFVFKGFIIIAAV 549
Cdd:pfam02653 216 DAIAAVVL------GGAGSPIGVVIGSLIIgLVQSLGLGALGSPPELSLLVLGALLILVL 269
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
35-218 |
6.45e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.41 E-value: 6.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 35 NKIADLKQEIFSLKKSKM---IDPVEKQRLISEKKDEIEKAKVVAAKNKTEEIRVEKEAVAYANTISK-EYIAQ------ 104
Cdd:TIGR04523 335 KIISQLNEQISQLKKELTnseSENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNqEKLNQqkdeqi 414
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 105 -VVQAENESIAKHKQDFAQEVLKIKSE-------SAEKENKLKSSGMDSAALKEEIATLKYETKSalfdAKSRLssavgr 176
Cdd:TIGR04523 415 kKLQQEKELLEKEIERLKETIIKNNSEikdltnqDSVKELIIKNLDNTRESLETQLKVLSRSINK----IKQNL------ 484
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 2540495687 177 ckDAKNQAFVNHVQKNRSLrNGKNKFSEDFVLNLNDYIYKFK 218
Cdd:TIGR04523 485 --EQKQKELKSKEKELKKL-NEEKKELEEKVKDLTKKISSLK 523
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
3-161 |
3.73e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 49.72 E-value: 3.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 3 ENASVAEIKSLDEDEKLRGYSETLHNLRKDGVNK---IADLKQEIFSLKK------------------------------ 49
Cdd:pfam05483 573 ENARSIEYEVLKKEKQMKILENKCNNLKKQIENKnknIEELHQENKALKKkgsaenkqlnayeikvnklelelasakqkf 652
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 50 SKMIDPVEKQ---RLISEKK--DEIEKAKVVAaknkTEEIRVEKEavayANTISKEYIAQVVQAenesIAKHKQDFAQEV 124
Cdd:pfam05483 653 EEIIDNYQKEiedKKISEEKllEEVEKAKAIA----DEAVKLQKE----IDKRCQHKIAEMVAL----MEKHKHQYDKII 720
|
170 180 190
....*....|....*....|....*....|....*..
gi 2540495687 125 LKIKSESAEKENKLKSSGMDSAALKEEIATLKYETKS 161
Cdd:pfam05483 721 EERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLS 757
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
48-184 |
3.15e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.06 E-value: 3.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 48 KKSKMIDPVEKQRLISEKKDEIEKAKVVAAKNKTEEIRVEKEAVAYANTISKEYIAQVVQAENESIAKHKQDFAQEV--- 124
Cdd:PTZ00121 1354 AAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKkka 1433
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2540495687 125 --LKIKSESAEKENKLKSSGMDsaALKEEIATLKYETKSALFDAKSRLSSAvGRCKDAKNQA 184
Cdd:PTZ00121 1434 deAKKKAEEAKKADEAKKKAEE--AKKAEEAKKKAEEAKKADEAKKKAEEA-KKADEAKKKA 1492
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
16-197 |
1.50e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.12 E-value: 1.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 16 DEKLRGYSETLHNLRKDgvnkIADLKQEIFSLKKSKmiDPVEKQrlISEKKDEIEKA-KVVAAKNK-----TEEIRVEKE 89
Cdd:COG4372 30 SEQLRKALFELDKLQEE----LEQLREELEQAREEL--EQLEEE--LEQARSELEQLeEELEELNEqlqaaQAELAQAQE 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 90 AVAYANTISKEYIAQV--VQAENESIAKHKQDFAQEVLKIKSESAEKENKLKSSGMDSAALKEEIATLKYETKSAlfdAK 167
Cdd:COG4372 102 ELESLQEEAEELQEELeeLQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQAL---SE 178
|
170 180 190
....*....|....*....|....*....|
gi 2540495687 168 SRLSSAVGRCKDAKNQAFVNHVQKNRSLRN 197
Cdd:COG4372 179 AEAEQALDELLKEANRNAEKEEELAEAEKL 208
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| MglC |
COG4211 |
ABC-type glucose/galactose transport system, permease component [Carbohydrate transport and ... |
211-560 |
1.69e-155 |
|
ABC-type glucose/galactose transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 443358 Cd Length: 336 Bit Score: 447.80 E-value: 1.69e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 211 NDYIYKFKLSKFFLDNGLYLAILVFFIVCIILAPisgsgNLLSLPNIFTILEQSSTRMFYALGVAGLILLAGTDLSVGRM 290
Cdd:COG4211 1 EKKIKKKKIKNFLLNNAIYIVLLLLIIAIIIINP-----NFLSLRNIRNILTQSSTRMIIALGVAGLIVTQGTDLSAGRM 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 291 VALGAVVTGLVLHPGQNIVTFFgmgpWDFTAIPmavrVIMALFSSVFLCVLFSAFAGVFSARLKIHPFISTLATQLIIYG 370
Cdd:COG4211 76 VGLAAVISASLLQSGDYAGKFF----PNLPELP----IIVPILIAIAIGALFGLINGFFVAKLKVPPFIATLGTMLIVYG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 371 LLFFGTS---GTPVGSIDSGIKDVFGGRWVLGVingelVTFPKLIIPAAIAIVVAWFIWNKTTFGKNMYAVGGNAEAASV 447
Cdd:COG4211 148 INSIYTDrpgAQPIGGLDESFTNFAQGSINIGG-----FGIPYLIIYAIIVIVIMWFIWNKTKFGKNMYAVGGNPEAAEV 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 448 SGISVFKVTLGVFIMAGIFYGFGAFFEAFK-ANASAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVLGVIIFTSLTYC 526
Cdd:COG4211 223 SGVNVFKTLIIVYALAGALYGFAGFLEAARtGSATNNYGNGYELDAIAACVVGGVSFSGGIGKISGVVIGVLIFTVINYG 302
|
330 340 350
....*....|....*....|....*....|....
gi 2540495687 527 LTFLGIDTNLQFVFKGFIIIAAVALDSIKYLKRK 560
Cdd:COG4211 303 LTFIGVNPYWQYIIKGLIIIAAVALDIRKYLKKK 336
|
|
| mglC |
PRK09478 |
galactose/methyl galactoside ABC transporter permease MglC; |
216-560 |
7.77e-95 |
|
galactose/methyl galactoside ABC transporter permease MglC;
Pssm-ID: 181892 [Multi-domain] Cd Length: 336 Bit Score: 292.75 E-value: 7.77e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 216 KFKLSKFFLDNGLYLAILVFFIVCIILAPisgsgNLLSLPNIFTILEQSSTRMFYALGVAGLILLAGTDLSVGRMVALGA 295
Cdd:PRK09478 6 KKSFLTYLKEGGIYVVLLVLLAIIIIQDP-----TFLSLLNLSNILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 296 VVTGLVLHPGQNIVTFFGmgpwDFTAIPMAVRVIMAlfssVFLCVLFSAFAGVFSARLKIHPFISTLATQLIIYGL--LF 373
Cdd:PRK09478 81 VVAATLLQSMDNANKVFP----ELATMPIALVILIV----CAIGAVIGLINGLIIAYLNVTPFIATLGTMIIVYGInsLY 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 374 FGTSG-TPVGSIDSGIKDVFGGRWVLGVIngelvTFPKLIIPAAIAIVVAWFIWNKTTFGKNMYAVGGNAEAASVSGISV 452
Cdd:PRK09478 153 YDFVGaSPISGFDSGFSTFAQGFVALGSF-----RLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPEAAKVSGVNV 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 453 FKVTLGVFIMAGIFYGFGAFFEAFK-ANASAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVLGVIIFTSLTYCLTFLG 531
Cdd:PRK09478 228 PLNLLMIYALSGVFYAFGGMLEAGRiGSATNNLGFMYELDAIAACVVGGVSFSGGVGTVIGVVTGVIIFTVINYGLTYIG 307
|
330 340
....*....|....*....|....*....
gi 2540495687 532 IDTNLQFVFKGFIIIAAVALDSIKYLKRK 560
Cdd:PRK09478 308 VNPYWQYIIKGAIIIFAVALDSLKYARKK 336
|
|
| AraH |
COG1172 |
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component ... |
216-560 |
1.53e-78 |
|
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440785 Cd Length: 322 Bit Score: 250.02 E-value: 1.53e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 216 KFKLSKFFLDNGLYLAILVFFIVCIILAPisgsgNLLSLPNIFTILEQSSTRMFYALGVAGLILLAGTDLSVGRMVALGA 295
Cdd:COG1172 9 RSLLRRLLPELGLLLALVLLLVVFSILSP-----GFLSPGNLSNILRQAAILGILALGMTLVIITGGIDLSVGSVVALSG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 296 VVTGLVLhpgqnivTFFGMGPWdftaipmavrviMALFSSVFLCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFG 375
Cdd:COG1172 84 VVAALLL-------VALGLPIL------------LAILLALLVGALLGLLNGLLVAKLRIPPFIVTLGTMFIARGLALLL 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 376 TSGTPVGSIDSGIKDVFGGRwVLGVingelvtfPKLIIPAAIAIVVAWFIWNKTTFGKNMYAVGGNAEAASVSGISVFKV 455
Cdd:COG1172 145 TGGRPISGLPDAFRALGQGS-LLGI--------PVPVLIALVVALVAWFLLRRTRFGRYIYAVGGNEEAARLSGINVRRV 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 456 TLGVFIMAGIFYGFGAFFEAFKAN-ASAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVLGVIIFTSLTYCLTFLGIDT 534
Cdd:COG1172 216 KILAYVLSGLLAGLAGILLAARLGsAQPNAGSGYELDAIAAVVIGGTSLTGGRGSVLGTLLGALILGVLNNGLNLLGVSS 295
|
330 340
....*....|....*....|....*.
gi 2540495687 535 NLQFVFKGFIIIAAVALDSIKYLKRK 560
Cdd:COG1172 296 YWQQIVKGAIILLAVLLDRLRRRRRA 321
|
|
| TM_PBP1_transp_AraH_like |
cd06579 |
Transmembrane subunit (TM) of Escherichia coli AraH and related proteins. E. coli AraH is the ... |
264-552 |
2.44e-74 |
|
Transmembrane subunit (TM) of Escherichia coli AraH and related proteins. E. coli AraH is the TM of a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of the monosaccharide arabinose. This group also contains E. coli RbsC, AlsC, and MglC, which are TMs of other monosaccharide transporters, the ribose transporter, the D-allose transporter and the galactose transporter, respectively. The D-allose transporter may also be involved in low affinity ribose transport. These transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Proteins in this subgroup have a single TM which homodimerizes to generate the transmembrane pore.
Pssm-ID: 119321 [Multi-domain] Cd Length: 263 Bit Score: 236.92 E-value: 2.44e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 264 SSTRMFYALGVAGLILLAGTDLSVGRMVALGAVVTGLVLHPGqnivtffGMGPWdfTAIPMAVrvimalfssvFLCVLFS 343
Cdd:cd06579 1 AAVLGILALGMTLVIITGGIDLSVGSVAALSAVVAALLLVNA-------GLPIP--LAILAAL----------AVGALIG 61
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 344 AFAGVFSARLKIHPFISTLATQLIIYGLLFFGTSGTPVGSIDSGIKDVFGGRWVLGVingelvtfPKLIIPAAIAIVVAW 423
Cdd:cd06579 62 LLNGLLVAYLRIPPFIVTLGTMFILRGLALLITGGRPISGLPPLFSFFLGGGLILGI--------PVPVLIALAVALVAW 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 424 FIWNKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYGFGAFFEAFKAN-ASAGTGQGYELDAIAACVVGGIS 502
Cdd:cd06579 134 FLLRRTRFGRYLYAVGGNPEAARLSGINVRRVKILAYVLSGLLAGLAGILLAARLGsAQPTAGNGYELDAIAAVVLGGTS 213
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2540495687 503 FNGGIGKIGGAVLGVIIFTSLTYCLTFLGIDTNLQFVFKGFIIIAAVALD 552
Cdd:cd06579 214 LTGGRGSVLGTLLGALLLGVLNNGLNLLGVSSFWQQIVKGAILLLAVALD 263
|
|
| COG4158 |
COG4158 |
Predicted ABC-type sugar transport system, permease component [General function prediction ... |
230-553 |
1.20e-55 |
|
Predicted ABC-type sugar transport system, permease component [General function prediction only];
Pssm-ID: 443324 Cd Length: 334 Bit Score: 190.53 E-value: 1.20e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 230 LAILVFFIV-CIILAPISGsgNLLSLPNIFTILEQSSTRMFYALGVAGLILLAGTDLSVGRMVALGAVVTGLV-LHPGqn 307
Cdd:COG4158 30 VGMLPVLILlCIGFELLTP--NFLTVQNLSNIARQASINIVLAAGMTFVILTGGIDLSVGSILAASAVVAVLVsLLPG-- 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 308 ivtffgmgpWDFTAIPMAVrvIMALfssvflcvLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFGTSGTPVgsIDSG 387
Cdd:COG4158 106 ---------LGLLGIPAAL--LVGL--------LFGLINGLLIAFLKLPPFIVTLGSLTALRGAARLLANGTTV--FNPD 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 388 IKDVFGGrwvlgviNGELVTFPKLIIPAAIAIVVAWFIWNKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFY 467
Cdd:COG4158 165 LPFAWIG-------NGYLLGIPWLVVIALAVVLASWFILRRTVLGVHIYAVGGNAQAARLTGIKVWRVLLFVYAVSGLLA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 468 GFGAFFEA---FKANAsAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVLGVIIFTSLTYCLTFLGIDTNLQFVFKGFI 544
Cdd:COG4158 238 GLGGVMSAarlYAANG-LQLGQGYELDAIAAVILGGTSFVGGIGSIWGTLIGALIIAVLNNGLILLGVSDFWQFIIKGLV 316
|
....*....
gi 2540495687 545 IIAAVALDS 553
Cdd:COG4158 317 IIIAVALDR 325
|
|
| XylH |
COG4214 |
ABC-type xylose transport system, permease component [Carbohydrate transport and metabolism]; |
219-560 |
8.49e-54 |
|
ABC-type xylose transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 443360 [Multi-domain] Cd Length: 393 Bit Score: 187.25 E-value: 8.49e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 219 LSKFFLDNGLYLAILVFFIVCIILAPISGsGNLLSLPNIFTILEQSSTRMFYALGVAGLILLAGTDLSVGRMVALGAVVT 298
Cdd:COG4214 15 RRLLGGDLRSLGMIIALVVIWIVFQILTG-GTFLTPRNLSNLLLQNSYIGILAIGMVLVILLGHIDLSVGSVSGFVGAVA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 299 GLVlhpgqniVTFFGMGPWdfTAIPMAvrvimalfssvfLCV--LFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFGT 376
Cdd:COG4214 94 AVL-------MVNWGLPWW--LAILAA------------LLVgaLIGAWQGFWVAYVGIPSFIVTLAGMLAFRGLTLLVL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 377 SGTPVGSIDSGIKDVFGGR---------WVLGVI-----------------NGELVTFP------KLIIPAAIAIVVAW- 423
Cdd:COG4214 153 GGGTIAPFDPTFQAIGNGFlpdilgtlsWVLGAVavaayvalqlrsrrrrrRYGLPVEPlwlfvlKLALLAVLILGAVYl 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 424 ----------------------FIWNKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYGFGAFFEAFKAN-A 480
Cdd:COG4214 233 lnsyrgipivvlillvlvvvytFVLTRTVFGRHIYAVGGNPEAARLSGINVRRVTFSVFVNMGVLAALAGIVFAARLNsA 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 481 SAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVLGVIIFTSLTYCLTFLGIDTNLQFVFKGFIIIAAVALDSikYLKRK 560
Cdd:COG4214 313 TPSAGTGFELDAIAAAVIGGTSLFGGVGTVYGAVIGALVMGSLNNGMSLLGVDSDWQQIVKGLVLLLAVAFDV--LSRRR 390
|
|
| rbsC |
PRK09512 |
ribose ABC transporter permease protein; Reviewed |
216-552 |
1.47e-47 |
|
ribose ABC transporter permease protein; Reviewed
Pssm-ID: 181922 [Multi-domain] Cd Length: 320 Bit Score: 168.36 E-value: 1.47e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 216 KFKLSKFFLDNGLYLAILVFFIVCIILAPisgsgNLLSLPNIFTILEQSSTRMFYALGVAGLILLAGTDLSVGRMVAL-G 294
Cdd:PRK09512 9 RYFTKAWLIEQKSLIALLVLIAIVSTLSP-----NFFTVNNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALtG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 295 AVVTGLVlhpgqnivtffgmgpwdftaiPMAVRVIMALFSSVFLCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFF 374
Cdd:PRK09512 84 AVAASIV---------------------GIEVNALVAVPAALALGAAIGAVTGVIVAKGKVQAFIATLVMMLLLRGVTMV 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 375 GTSGTPVGSIDSGIKDVFGgrWvLGVinGELVTFPKLIIPAAIAIVVAWFIWNKTTFGKNMYAVGGNAEAASVSGISVFK 454
Cdd:PRK09512 143 YTDGSPINTGFTDNADLFG--W-FGI--GRPLGIPTPVWIMAIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNK 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 455 VTLGVFIMAGIFYGFGAFFEAFK-ANASAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVLGVIIFTSLTYCLTFLGID 533
Cdd:PRK09512 218 VKIIVYALCGLLAALAGIIEVARlSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVS 297
|
330
....*....|....*....
gi 2540495687 534 TNLQFVFKGFIIIAAVALD 552
Cdd:PRK09512 298 SYYQMIVKAVVILLAVLVD 316
|
|
| araH |
PRK11285 |
L-arabinose transporter permease protein; Provisional |
216-560 |
5.43e-42 |
|
L-arabinose transporter permease protein; Provisional
Pssm-ID: 183076 [Multi-domain] Cd Length: 333 Bit Score: 153.68 E-value: 5.43e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 216 KFKLSKFFLDNGLYLAILVFFIVCIILAPisgsgNLLSLPNIFTILEQSSTRMFYALGVAGLILLAGTDLSVGRMVALGA 295
Cdd:PRK11285 20 RFSLWRIWDQYGMLVVFAVLFIACSLFVP-----NFASFINMKGLGLAISMIGMVACTMLFCLASGDFDLSVASVVAFAG 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 296 VVTGLVlhpgqnivtffgmgpwdftaIPMAVRVIMALFSSVFLCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFG 375
Cdd:PRK11285 95 VVTAVV--------------------INATESLWLGVAAGLLLGAAVGLVNGFVIARLKINALITTLATMQIVRGLAYII 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 376 TSGTPVGSIDSGIKDVFGGRWvLGVingelvtfPKLIIPAAIAIVVAWFIWNKTTFGKNMYAVGGNAEAASVSGISVFKV 455
Cdd:PRK11285 155 SDGKAVGISDERFFALGYANF-FGV--------PAPIWLTVACFVVFGFLLNKTTFGRNTLAIGGNEEAARLAGVPVVRT 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 456 TLGVFIMAGIFYGFGAFFEAfkANASAG---TGQGYELDAIAACVVGGISFNGGIGKIGGAVLGVIIFTSLTYCLTFLGI 532
Cdd:PRK11285 226 KIIIFVLQGLVSALAGVILA--SRMTSGqpmTSIGFELIVISACVLGGVSLKGGIAKISGVVAGVLILGTVENAMNLLNI 303
|
330 340
....*....|....*....|....*...
gi 2540495687 533 DTNLQFVFKGFIIIAAVALDSIKYLKRK 560
Cdd:PRK11285 304 SPFYQYVVRGLILLAAVLFDRYKQRAKR 331
|
|
| PRK09699 |
PRK09699 |
D-allose ABC transporter permease; |
229-552 |
3.83e-40 |
|
D-allose ABC transporter permease;
Pssm-ID: 182035 [Multi-domain] Cd Length: 312 Bit Score: 148.00 E-value: 3.83e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 229 YLAILVFFIVCIILAPISgSGNLLSLPNIFTILEQSSTRMFYALGVAGLILLAGTDLSVGRMVALGAVVTGLVLhpgqni 308
Cdd:PRK09699 12 YGTFFILAIIVAIFGSLS-PEYFLTTNNITQIFVQSSVTVLIGMGEFFAILVAGIDLSVGAILALSGMVTAKLM------ 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 309 vtFFGMGPwdftaipmavrVIMALFSSVFLCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFGTSGTPVGSIDSGI 388
Cdd:PRK09699 85 --LAGVDP-----------FLAALIGGVLVGGALGAINGCLVNWTGLHPFIITLGTNAIFRGITLVISDANSVYGFSFDF 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 389 KDVFGGrwvlgvingELVTFPKLIIPAAIAIVVAWFIWNKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYG 468
Cdd:PRK09699 152 VNFFAA---------SVIGIPVPVIFSLIVALILWFLTTRMRLGRNIYALGGNKNSAFYSGIDVKFHILVVFIISGVCAG 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 469 F-GAFFEAFKANASAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVLGVIIFTSLTYCLTFLGIDTNLQFVFKGFIIIA 547
Cdd:PRK09699 223 LaGVVSTARLGAAEPLAGMGFETYAIASAIIGGTSFFGGKGRIFSVVIGGLIIGTINNGLNILQVQTYYQLVVMGGLIIA 302
|
....*
gi 2540495687 548 AVALD 552
Cdd:PRK09699 303 AVALD 307
|
|
| GguB |
NF040906 |
sugar ABC transporter permease; |
232-560 |
7.45e-34 |
|
sugar ABC transporter permease;
Pssm-ID: 468841 [Multi-domain] Cd Length: 375 Bit Score: 132.20 E-value: 7.45e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 232 ILVFFIVCIILAPISGSGNLLSLPNIFTILEQSSTRMFYALGVAgLILLAG-TDLSVGRMVAL-GAVVTGLVLHPGqniv 309
Cdd:NF040906 7 MLIALVAIVVLFQILTGGILLRPLNVTNLILQNSYILILAIGML-LVIIAGhIDLSVGSVVAFvGAVAAVLMVNWG---- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 310 tffgmgpwdftaIPMAVRVIMALFssvfLCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFGTSGTPVG------- 382
Cdd:NF040906 82 ------------MPWWLAVLLCLL----VGALIGAWQGFWVAYVGIPAFIVTLAGMLVFRGLTLVVLGGQSIGpfpdgfq 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 383 SIDSG-IKDVFGGR------WVLGVI-------------------NGELVTFPKLIIP-AAIAIVVAWFIW--------- 426
Cdd:NF040906 146 KISSGfLPDLFGGTglhlltLLLGVLaaaalvwsqlrgrrrrikyGLEVEPMALFIAKlVLIAAAILFFTYllasyrglp 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 427 -----------------NKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYGF-GAFFEAFKANASAGTGQGY 488
Cdd:NF040906 226 nvliilgvlilvysfvtNRTVIGRHIYAVGGNEKAAKLSGIKTKRVTFLVFVNMGVLAALaGLVFAARLNSATPKAGNGF 305
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2540495687 489 ELDAIAACVVGGISFNGGIGKIGGAVLGVIIFTSLTYCLTFLGIDTNLQFVFKGFIIIAAVALDSikYLKRK 560
Cdd:NF040906 306 ELDAIAACFIGGASASGGVGTVVGAIIGALVMGVLNNGMSILGIGIDWQQVIKGLVLLAAVAFDV--YNKRK 375
|
|
| BPD_transp_2 |
pfam02653 |
Branched-chain amino acid transport system / permease component; This is a large family mainly ... |
256-549 |
3.81e-28 |
|
Branched-chain amino acid transport system / permease component; This is a large family mainly comprising high-affinity branched-chain amino acid transporter proteins such as E. coli LivH and LivM, both of which are form the LIV-I transport system. Also found with in this family are proteins from the galactose transport system permease and a ribose transport system.
Pssm-ID: 396977 [Multi-domain] Cd Length: 269 Bit Score: 113.51 E-value: 3.81e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 256 NIFTILEQSSTRMFYALGVAGLILLAGT-DLSVGRMVALGAVVTGLVLHpgqnivtFFGMGPWdftaipmavrviMALFS 334
Cdd:pfam02653 1 NILNILTLASIYAIAALGLTLIYGIAGViNLGHGGFMMLGAYVAAMLLN-------LLGPGLW------------LALPV 61
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 335 SVFLCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFGtsgtpVGSIDSGIKDVFGGRWVLGVInGELVTFPKLIIP 414
Cdd:pfam02653 62 GILVGAAVGLLIGILTLRLKINEVIITLLLNLAALGLALFL-----VTGILGGEGGTSGITGPSGFP-GAFLSFAFAFIF 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 415 --AAIAIVVAWFIWNKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYGFGAFFEAFK--ANASAGTGQGYEL 490
Cdd:pfam02653 136 llALLLVLALWLLLYRTKFGRALRAVGENEEAARAAGINVKKLKLLTFVISGALAGLAGALLALYtgVVPPSNFGVGLGL 215
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 491 DAIAACVVggisfnGGIGKIGGAVLGVIIF-TSLTYCLTFLGIDTNLQFVFKGFIIIAAV 549
Cdd:pfam02653 216 DAIAAVVL------GGAGSPIGVVIGSLIIgLVQSLGLGALGSPPELSLLVLGALLILVL 269
|
|
| PRK11618 |
PRK11618 |
inner membrane ABC transporter permease protein YjfF; Provisional |
228-519 |
3.42e-24 |
|
inner membrane ABC transporter permease protein YjfF; Provisional
Pssm-ID: 183235 [Multi-domain] Cd Length: 317 Bit Score: 103.11 E-value: 3.42e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 228 LYLAILVF---FIVCIILAPisgsgNLLSLPNIFTILEQSSTRMFYALGVAGLILLAGTDLSVGRMVALGAVVTGLvlhp 304
Cdd:PRK11618 8 LMITIGVFvlgYLFCLVQFP-----GFASTRVICNLLTDNAFLGIVAVGMTFVILSGGIDLSVGSVIAFTGVFLAK---- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 305 gqnIVTFFGMGPWdftaipMAVRVIMALfssvflCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFGTsgTPVGSI 384
Cdd:PRK11618 79 ---LIGDYGWSPL------LAFPLVLVM------GAAFGAFMGALIHYLKLPAFIVTLAGMFLARGVSFLVS--EESIPI 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 385 DSGIKDVFGGrWVLGVINGELVTFPKLIipAAIAIVVAWFIWNKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAG 464
Cdd:PRK11618 142 NHPFYDTLSS-LAWKLPGGGRLSAMALI--MLAVVAIGIFLAHRTRFGNNVYAIGGNATSANLMGIPVRRTTIRIYMLSG 218
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2540495687 465 IFYGF-GAFFEAFKANASAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVLGVII 519
Cdd:PRK11618 219 FLATLaGIVFSLYTSAGYALAAVGVELDAIAAVVIGGTLLTGGVGTVLGTLFGVLI 274
|
|
| PRK15432 |
PRK15432 |
autoinducer 2 ABC transporter permease LsrC; Provisional |
221-552 |
1.22e-21 |
|
autoinducer 2 ABC transporter permease LsrC; Provisional
Pssm-ID: 185330 [Multi-domain] Cd Length: 344 Bit Score: 96.34 E-value: 1.22e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 221 KFFLDN---GLYLAILVFFIVCIILAPisgsgNLLSLPNIFTILEQSSTRMFYALGVAGLILLAGTDLSVGRMVALGAVV 297
Cdd:PRK15432 3 KFIQNNrelTALLAIVLLFVLLGFLDR-----QYLSLQTLTMVFSSAQILILLAIGATLVMLTRNIDVSVGSITGLCAVL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 298 TGLVLHPGQNIVTffgmgpwdftaipmavrvimALFSSVFLCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFGTS 377
Cdd:PRK15432 78 VGMLLNAGYSLPV--------------------ACLATLLLGLLAGFFNGVLVAWLRIPAIVATLGTLGLYRGIMLLWTG 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 378 GTPVGSIDSGIKDVFGGRWVLGVINGELVTFpkliipaaIAIVVAWFIwNKTTFGKNMYAVGGNAEAASVSGISVFKVTL 457
Cdd:PRK15432 138 GKWIEGLPAELKQLSAPILLGISPIGWLTLI--------LILAMAWLL-AKTAFGRSFYATGDNLQGARQLGVRTEAIRI 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 458 GVFIMAGIFYGF-GAFFEAFKANASAGTGQGYELDAIAACVVGGISFNGGIGKIGGAVLGVIIFTSLTYCLTFLGIDTNL 536
Cdd:PRK15432 209 VAFSLNGCMAALaGIVFASQIGFIPNQTGTGLEMKAIAACVLGGISLLGGSGTIIGAVLGAYFLTQIDSVLVLLRIPAWW 288
|
330
....*....|....*.
gi 2540495687 537 QFVFKGFIIIAAVALD 552
Cdd:PRK15432 289 NDFIAGLVLLGVLVFD 304
|
|
| TM_PBP1_branched-chain-AA_like |
cd06574 |
Transmembrane subunit (TM) of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette ... |
269-548 |
2.35e-20 |
|
Transmembrane subunit (TM) of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which are involved in the uptake of branched-chain amino acids (AAs), as well as TMs of transporters involved in the uptake of monosaccharides including ribose, galactose, and arabinose. These transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. This group includes Escherichia coli LivM and LivH, two TMs which heterodimerize to form the translocation pathway of the E. coli branched-chain AA LIV-1/LS transporter. This transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) and LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine. Included in this group are proteins from transport systems that contain a single TM which homodimerizes to generate the transmembrane pore; for example E. coli RbsC, AlsC, and MglC, the TMs of the high affinity ribose transporter, the D-allose transporter and the galactose transporter, respectively. The D-allose transporter may also to be involved in low affinity ribose transport.
Pssm-ID: 119320 [Multi-domain] Cd Length: 266 Bit Score: 90.80 E-value: 2.35e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 269 FYALGVAGLILLAG-TDLSVGRMVALGAVVTGLVLHpgqnivtfFGMGPWDFTAIPMAVRVIMALFSsvflcvlfsafaG 347
Cdd:cd06574 6 ILALGVYIVFRILGfPDLTVDGSFPLGAAVAAILIV--------AGYNPWLALIAAILAGAAAGLVT------------G 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 348 VFSARLKIHPFISTLATQLIIYG--LLFFGTSGTPVGSIDSGIKDVFGGRWvLGVINGELVTfpkLIIPAAIAIVVAWFI 425
Cdd:cd06574 66 FLHTRLKINGLLAGILIMIGLYSinLRIMGGPNIPLGTRDTLLGLLLLFGI-SGTLSIPVVL---LLIVLLVLFLVIWFL 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 426 wnKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYGF-GAFFEAFKANASAGTGQGYELDAIAACVVGGISFN 504
Cdd:cd06574 142 --RTKLGLAMRATGDNPDMARSLGINVDRTRILGLVISNALAALgGALYAQYQGFADVNMGIGTGVIGLAAVIIGGAIVG 219
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2540495687 505 G--GIGKIGGAVLGVIIF-TSLTYCLTFLGIDTNLQFVFKGFIIIAA 548
Cdd:cd06574 220 RrtIKASILGVIIGAILYrIALALALGSGLIPSDLKLITAGVIVLVL 266
|
|
| LivH |
COG0559 |
Branched-chain amino acid ABC-type transport system, permease component [Amino acid transport ... |
268-549 |
1.80e-18 |
|
Branched-chain amino acid ABC-type transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 440325 [Multi-domain] Cd Length: 290 Bit Score: 85.88 E-value: 1.80e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 268 MFYALGVAGLILLAGT----DLSVGRMVALGAVVTGLVlhpgqniVTFFGMGPWdfTAIPMAVrVIMALFSSVFLCVLFS 343
Cdd:COG0559 16 SIYALIALGLTLIFGVmgviNFAHGEFVMLGAYVAYTL-------ATLLGLPLW--LALLLAV-LVAALLGVLLERLVIR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 344 AFAGvfsaRLKIHPFISTLATQLIIYGL--LFFGTSGTPVGSIdsgikdvFGGRWVLGVINgelVTFPKLIIPAAIAIVV 421
Cdd:COG0559 86 PLRG----APPLALLLATIGLSLVLQGLvlLIFGADPRSFPAL-------LSGSVELGGVS---IPAYRLFIIVVALVLL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 422 A--WFIWNKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYGFGAFFEAFKANASAGTGQGYELDAIAACVVG 499
Cdd:COG0559 152 AalWLFLRRTRLGLAMRAVAQNREAARLMGINVDRVIALTFALGAALAGLAGVLLAPIYSVSPTMGFLLGLKAFAAVVLG 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2540495687 500 GI-SFNGGIgkIGGAVLGVIIFTSLTYcltflgIDTNLQFVFkGFIIIAAV 549
Cdd:COG0559 232 GLgSIPGAV--VGGLLLGLAESLGAAY------LPSGYKDVV-AFVLLILV 273
|
|
| TM_PBP1_LivM_like |
cd06581 |
Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two ... |
268-549 |
4.13e-18 |
|
Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.
Pssm-ID: 119323 [Multi-domain] Cd Length: 268 Bit Score: 84.42 E-value: 4.13e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 268 MFYALGVAGLILLAGTD--LSVGRM--VALGAVVTGLVlhpgqniVTFFGMGPWdftaipmavrviMALFSSVFLCVLFS 343
Cdd:cd06581 2 LIYAILALGLNLLLGYAgqLSLGHAafFGIGAYTAALL-------ATRLGLPFW------------LALLAAGLVAALVG 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 344 AFAGVFSARLKIHPF-ISTLATQLIIYGLLF------FGTSGTPVGSIDSGIKDVFGGRWVLgvingelvtfpkLIIPAA 416
Cdd:cd06581 63 LLLGLPALRLRGVYFaIATLAFAEIVRLLALnwssltGGSNGLSGIPPPLLGGLLLSSPLAF------------YYLVLA 130
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 417 IAIVVAWFIWN--KTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYGF-GAFFEAFKANASAGT-GQGYELDA 492
Cdd:cd06581 131 VLLLVLLLLRRlvRSPFGRALRAIRENEVAAEALGINVTRYKLLAFALSAALAGLaGALYAHYLGFVSPESfGFALSIEL 210
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2540495687 493 IAACVVGGIsfnggiGKIGGAVLGVIIFTSLTYCLTFLGidTNLQFVFKGFIIIAAV 549
Cdd:cd06581 211 LLMVVLGGL------GSLLGPVLGAALLVLLPELLRSLG--PGLRLLVFGLLLILVV 259
|
|
| TM_PBP1_LivH_like |
cd06582 |
Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two ... |
268-549 |
6.25e-18 |
|
Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivH forms a heterodimer with another TM, LivM, to generate the transmembrane pore. LivM is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.
Pssm-ID: 119324 [Multi-domain] Cd Length: 272 Bit Score: 84.02 E-value: 6.25e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 268 MFYALGVAGLILLAGT----DLSVGRMVALGAVVTGLVlhpgqniVTFFGMGPWdfTAIPMAVrVIMALFSSVFLCVLFS 343
Cdd:cd06582 6 AIYALIALGLTLIFGVtgviNFAHGEFYMLGAYVAYTL-------LVALGLPFW--LALLLAL-LVAALLGVLLERLVLR 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 344 AFAGVFSARLKIHPFISTLATQLIIygLLFFGTSGTPVGSIDSGIKDVFGGRwvlgvingelVTFPKLIIPA-AIAIVVA 422
Cdd:cd06582 76 PLRGAPLLTLLITFGGLLILLQGLL--LIFGGDPRVPPPPLLSGSVELGGVT----------IPPYRLFIIAvALVLLAA 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 423 -WFIWNKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYGFGAFFEAFKANASAGTGQGYELDAIAACVVGGI 501
Cdd:cd06582 144 lYLFLRRTRLGRAIRAVAQNPEAARLLGINVRRVFALTFALGAALAGLAGVLLAPITGVSPTMGLLLLLKAFAAVVLGGL 223
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2540495687 502 -SFNGGIgkIGGAVLGVIIFTSLTYcltflgIDTNLQFVFkGFIIIAAV 549
Cdd:cd06582 224 gSIPGAV--VGGLLLGLAESLAAAY------LSSGYKDAV-AFVLLILV 263
|
|
| TM_PBP1_transp_TpRbsC_like |
cd06580 |
Transmembrane subunit (TM) of Treponema pallidum (Tp) RbsC-1, RbsC-2 and related proteins. ... |
319-548 |
7.99e-18 |
|
Transmembrane subunit (TM) of Treponema pallidum (Tp) RbsC-1, RbsC-2 and related proteins. This is a functionally uncharacterized subgroup of TMs which belong to a larger group of TMs of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters, which are mainly involved in the uptake of branched-chain amino acids (AAs) or in the uptake of monosaccharides including ribose, galactose, and arabinose, and which generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction.
Pssm-ID: 119322 [Multi-domain] Cd Length: 234 Bit Score: 82.87 E-value: 7.99e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 319 FTAIPMAVRVIMALFSSVFLCVLFSAFAGVFSARLKIHPFISTLATQLIIYGLLFFgtsgtpvgsidsgikdvfggrwvl 398
Cdd:cd06580 41 YLGLPATGSLPLGLLAAALAGALWALLPALLKAKLGVNEVISGLMLNYIALGLTSY------------------------ 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 399 gvingelvtfpkLIIPAAIAIVVAWFIWNKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYGFGAFFE--AF 476
Cdd:cd06580 97 ------------LLLLALLLVILVWLLLYRTRFGLRLRAVGENPRAARYAGINVKRVRLLAMLISGALAGLAGAYLvlGV 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2540495687 477 KANASAGTGQGYELDAIAACVVGGisfNGGIGKIGGAVLGVIIFTSLTYCLTFLGIDTNLQFVFKGFIIIAA 548
Cdd:cd06580 165 QGRFTEGMSAGYGFIAIAVALLGR---WNPLGILLAALLFGALEAGGIALQRSGGVPSELVQVLPGIIVLFV 233
|
|
| LivM |
COG4177 |
ABC-type branched-chain amino acid transport system, permease component [Amino acid transport ... |
268-549 |
7.50e-17 |
|
ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 443336 [Multi-domain] Cd Length: 285 Bit Score: 80.90 E-value: 7.50e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 268 MFYALGVAGLILLAG----TDLSVGRMVALGAVVTGLVLhpgqnivTFFGMGPWdfTAIPMAVrvimalfssvFLCVLFS 343
Cdd:COG4177 12 LIYAILALGLNLLLGytglLSLGHAAFFGIGAYAAALLT-------THLGLPFW--LALLLAG----------LVAALLG 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 344 AFAGVFSARLKIHPF-ISTLATQLIIYGLLFFGTSGTpvGSiDSGIKDVFGGRWVLGVINGELVTFpklIIPAAIAIVVA 422
Cdd:COG4177 73 LLIGLPALRLRGDYLaIATLAFAEIVRLLALNLESLT--GG-ADGLSGIPRPTLFGLDLGSPLAFY---YLVLALLVLVL 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 423 WFIWN--KTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYGF-GAFFEAFKANASAGT-GQGYELDAIAACVV 498
Cdd:COG4177 147 LLLRRlvRSRFGRALRAIRENEIAAEALGINVTRYKLLAFVLSAALAGLaGALYAHYVGFVSPESfSFLLSIEILLMVVL 226
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2540495687 499 GGIsfnggiGKIGGAVLGVIIFTSLTYCLTFLgidTNLQFVFKGFIIIAAV 549
Cdd:COG4177 227 GGL------GSLLGPVLGAVLLVLLPELLRSL---PEYRLLIFGLLLILVV 268
|
|
| NupP |
COG4603 |
ABC-type guanosine uptake system NupNOPQ, permease component NupP [Nucleotide transport and ... |
230-560 |
2.88e-15 |
|
ABC-type guanosine uptake system NupNOPQ, permease component NupP [Nucleotide transport and metabolism];
Pssm-ID: 443653 [Multi-domain] Cd Length: 356 Bit Score: 77.47 E-value: 2.88e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 230 LAILVFFIVCIILAPISG-----------SGNLLSLPNIFTILEQSSTRMFYALGVA-----GLI-------LLAGtdls 286
Cdd:COG4603 21 LAVLLALLVGALLILLAGanpleaysalfQGAFGSPYGLGETLVKATPLILTGLAVAvafraGLFnigaegqLYLG---- 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 287 vgrmvALGAVVTGLVLHPgqnivtffgmgpwdftaIPMAVRVIMALFSSVFLCVLFSAFAGVFSARLKIHPFISTL---- 362
Cdd:COG4603 97 -----ALAAAAVGLALPG-----------------LPGPLHLPLALLAGALAGALWAAIPGLLKARFGVNEVITTLmlny 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 363 -ATQLIIYglLFFGTSGTPvGSIDSGIKDVFGGRWVLGVINGELVTFpkLIIPAAIAIVVAWFIWNKTTFGKNMYAVGGN 441
Cdd:COG4603 155 iALYLVNY--LVRGPLRDP-GSGFPQTPPIPESARLPRLLPGTRLHL--GLLIALLAAVLVWVLLNRTTLGYELRAVGLN 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 442 AEAASVSGISVFKVTLGVFIMAGIFYGFGAFFE----AFKANASAGTGQGYelDAIAACVVGGisfNGGIGKIGGAVLGV 517
Cdd:COG4603 230 PRAARYAGINVKRLIVLAMLISGALAGLAGAVEvlgvQGRLTPGFSPGYGF--TGIAVALLGR---NNPLGIILAALLFG 304
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2540495687 518 IIFTSLTYCLTFLGIDTNLQFVFKGFIIIAAVALDS-IKYLKRK 560
Cdd:COG4603 305 ALYVGGDAMQRALGVPSEIVDVIQGLIILFVLAADFlIRYRLRR 348
|
|
| PRK15038 |
PRK15038 |
autoinducer 2 ABC transporter permease LsrD; |
265-554 |
9.22e-13 |
|
autoinducer 2 ABC transporter permease LsrD;
Pssm-ID: 184998 Cd Length: 330 Bit Score: 69.47 E-value: 9.22e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 265 STRMFYALGVAGL-----ILLAGTDLSVGRMVALGAVVTGLVLHPGqnivtffgmgpwdftaIPMAVRVIMALfssvflc 339
Cdd:PRK15038 38 STSDFICIGIVALpltmvIVSGGIDISFGSTIGLCAIALGVLFQSG----------------VPMPLAILLTL------- 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 340 vLFSAFAGVFSARL----KIHPFISTLATQLIIYG--LLFFGTSGTP----VGSIDSGIKDvFGGRWVLGVingelvtfP 409
Cdd:PRK15038 95 -LLGALCGLINAGLiiytGVNPLVITLGTLYLFGGsaLLLSGMAGATgyegIGGFPMAFTD-FANLDVLGL--------P 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 410 KLIIPAAIAIVVAWFIWNKTTFGKNMYAVGGNAEAASVSGISVFKVTLGVFIMAGIFYGFGA-FFEAFKANASAGTGQGY 488
Cdd:PRK15038 165 VPLIIFLICLLVFWLLMHRTHAGRNVFLIGQSPRVALYSAIPVNRTLCALYAMTGLASAIAAvLLVSYFGSARSDLGASF 244
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2540495687 489 ELDAIAACVVGGISFNGGIGKIGGAVLGVIIFTSLTYCLTFLGIDTNLQFVFKGFIIIAAVALDSI 554
Cdd:PRK15038 245 LMPAITAVVLGGANIYGGSGSIIGTALAVLLVGYLQQGLQMAGVPNQISSALSGALLIVVVVGRSV 310
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
35-218 |
6.45e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.41 E-value: 6.45e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 35 NKIADLKQEIFSLKKSKM---IDPVEKQRLISEKKDEIEKAKVVAAKNKTEEIRVEKEAVAYANTISK-EYIAQ------ 104
Cdd:TIGR04523 335 KIISQLNEQISQLKKELTnseSENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNqEKLNQqkdeqi 414
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 105 -VVQAENESIAKHKQDFAQEVLKIKSE-------SAEKENKLKSSGMDSAALKEEIATLKYETKSalfdAKSRLssavgr 176
Cdd:TIGR04523 415 kKLQQEKELLEKEIERLKETIIKNNSEikdltnqDSVKELIIKNLDNTRESLETQLKVLSRSINK----IKQNL------ 484
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 2540495687 177 ckDAKNQAFVNHVQKNRSLrNGKNKFSEDFVLNLNDYIYKFK 218
Cdd:TIGR04523 485 --EQKQKELKSKEKELKKL-NEEKKELEEKVKDLTKKISSLK 523
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
3-161 |
3.73e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 49.72 E-value: 3.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 3 ENASVAEIKSLDEDEKLRGYSETLHNLRKDGVNK---IADLKQEIFSLKK------------------------------ 49
Cdd:pfam05483 573 ENARSIEYEVLKKEKQMKILENKCNNLKKQIENKnknIEELHQENKALKKkgsaenkqlnayeikvnklelelasakqkf 652
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 50 SKMIDPVEKQ---RLISEKK--DEIEKAKVVAaknkTEEIRVEKEavayANTISKEYIAQVVQAenesIAKHKQDFAQEV 124
Cdd:pfam05483 653 EEIIDNYQKEiedKKISEEKllEEVEKAKAIA----DEAVKLQKE----IDKRCQHKIAEMVAL----MEKHKHQYDKII 720
|
170 180 190
....*....|....*....|....*....|....*..
gi 2540495687 125 LKIKSESAEKENKLKSSGMDSAALKEEIATLKYETKS 161
Cdd:pfam05483 721 EERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLS 757
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
48-184 |
3.15e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.06 E-value: 3.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 48 KKSKMIDPVEKQRLISEKKDEIEKAKVVAAKNKTEEIRVEKEAVAYANTISKEYIAQVVQAENESIAKHKQDFAQEV--- 124
Cdd:PTZ00121 1354 AAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKkka 1433
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2540495687 125 --LKIKSESAEKENKLKSSGMDsaALKEEIATLKYETKSALFDAKSRLSSAvGRCKDAKNQA 184
Cdd:PTZ00121 1434 deAKKKAEEAKKADEAKKKAEE--AKKAEEAKKKAEEAKKADEAKKKAEEA-KKADEAKKKA 1492
|
|
| YscO-like |
pfam16789 |
YscO-like protein; This family of proteins is similar to the type III secretion protein YscO. ... |
15-135 |
5.84e-05 |
|
YscO-like protein; This family of proteins is similar to the type III secretion protein YscO. The family includes Chlamydia trachomatis CT670 which is found in a type III secretion gene cluster. CT670 interacts with CT671, a putative YscP homolog and CT670 and CT671 may form a chaperone-effector pair.
Pssm-ID: 435583 [Multi-domain] Cd Length: 160 Bit Score: 43.67 E-value: 5.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 15 EDEKLRGYSETLHNLRKDGVNKIADLKQEI----FSLKKSKM---IDPVEKQRLISEKKDEIEKAKVVAAKNKTEEIRVE 87
Cdd:pfam16789 33 EKEKLAELEAERDKVRKHKKAKMQQLRDEMdrgtTSDKILQMkryIKVVKERLKQEEKKVQDQKEQVRTAARNLEIAREE 112
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2540495687 88 -KEAvayantiskeyiaqvvQAENESIAKHKQDFAQEVLKIKSESAEKE 135
Cdd:pfam16789 113 lKKK----------------RQEVEKLEKHKKEWVKEMKKEEEDQEERE 145
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
3-184 |
5.87e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.29 E-value: 5.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 3 ENASVAEIKSLDEDEKLRGYSETLHNLRKDGVNKiADLKQEIFSLKKSKmidpvEKQRLISEKKDEiEKAKVVAAKNKTE 82
Cdd:PTZ00121 1240 EEAKKAEEERNNEEIRKFEEARMAHFARRQAAIK-AEEARKADELKKAE-----EKKKADEAKKAE-EKKKADEAKKKAE 1312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 83 EIRVEKEAVAYANTISKeyiaqvvQAENesiAKHKqdfAQEVLKiKSESAEKENKLKSSGMDSAALKEEIATLKYETKSA 162
Cdd:PTZ00121 1313 EAKKADEAKKKAEEAKK-------KADA---AKKK---AEEAKK-AAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKK 1378
|
170 180
....*....|....*....|..
gi 2540495687 163 LFDAKSRLSSAVGRCKDAKNQA 184
Cdd:PTZ00121 1379 KADAAKKKAEEKKKADEAKKKA 1400
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
11-214 |
1.14e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 45.01 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 11 KSLDEDEKlrgYSETLHNLRKDGVNKIADLKQEIFSLKKSkmIDPV-----EKQRLISEKKDEIEKAKVVAAKNKTEEIR 85
Cdd:TIGR04523 489 KELKSKEK---ELKKLNEEKKELEEKVKDLTKKISSLKEK--IEKLesekkEKESKISDLEDELNKDDFELKKENLEKEI 563
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 86 VEKEavayantiskEYIAQVVQAENESIAKHKQ------DFAQEVLKIKSESAEKENKLKSsgmdsaaLKEEIATLKYET 159
Cdd:TIGR04523 564 DEKN----------KEIEELKQTQKSLKKKQEEkqelidQKEKEKKDLIKEIEEKEKKISS-------LEKELEKAKKEN 626
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2540495687 160 KsalfdaksRLSSAVGRCKDAKN--QAFVNHVQKnrSLRNGKNKFSE------DFVLNLNDYI 214
Cdd:TIGR04523 627 E--------KLSSIIKNIKSKKNklKQEVKQIKE--TIKEIRNKWPEiikkikESKTKIDDII 679
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
16-197 |
1.50e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.12 E-value: 1.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 16 DEKLRGYSETLHNLRKDgvnkIADLKQEIFSLKKSKmiDPVEKQrlISEKKDEIEKA-KVVAAKNK-----TEEIRVEKE 89
Cdd:COG4372 30 SEQLRKALFELDKLQEE----LEQLREELEQAREEL--EQLEEE--LEQARSELEQLeEELEELNEqlqaaQAELAQAQE 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 90 AVAYANTISKEYIAQV--VQAENESIAKHKQDFAQEVLKIKSESAEKENKLKSSGMDSAALKEEIATLKYETKSAlfdAK 167
Cdd:COG4372 102 ELESLQEEAEELQEELeeLQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQAL---SE 178
|
170 180 190
....*....|....*....|....*....|
gi 2540495687 168 SRLSSAVGRCKDAKNQAFVNHVQKNRSLRN 197
Cdd:COG4372 179 AEAEQALDELLKEANRNAEKEEELAEAEKL 208
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
7-161 |
8.17e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 42.36 E-value: 8.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 7 VAEIKSLDE-----DEKLRGYSETLHNLRkdgvNKIADLKQEIFSLKKSKMIDPV--------EKQRLISEKKDEIEK-- 71
Cdd:PRK03918 390 EKELEELEKakeeiEEEISKITARIGELK----KEIKELKKAIEELKKAKGKCPVcgrelteeHRKELLEEYTAELKRie 465
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 72 AKVVAAKNKTEEIRVEKEAVAYANTISKEYIAQVVQAEN-ESIAKHKQDFAQEVLKIKSESAEKENKLkssgmdSAALKE 150
Cdd:PRK03918 466 KELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQlKELEEKLKKYNLEELEKKAEEYEKLKEK------LIKLKG 539
|
170
....*....|.
gi 2540495687 151 EIATLKYETKS 161
Cdd:PRK03918 540 EIKSLKKELEK 550
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
8-161 |
1.71e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.16 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 8 AEIKSLDEDEKLRgySETLHNLRkdgvNKIADLKQEIFSLKK-----SKMIDPVE------------KQRLISEKKDEIE 70
Cdd:TIGR04523 54 KELKNLDKNLNKD--EEKINNSN----NKIKILEQQIKDLNDklkknKDKINKLNsdlskinseiknDKEQKNKLEVELN 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 71 KAKVVAAKNKTE------EIRVEKEAVAYANTISKEYIAQVVQAENE--SIAKHKQDFAQEVLKIKSESAEKENKL---K 139
Cdd:TIGR04523 128 KLEKQKKENKKNidkfltEIKKKEKELEKLNNKYNDLKKQKEELENElnLLEKEKLNIQKNIDKIKNKLLKLELLLsnlK 207
|
170 180
....*....|....*....|..
gi 2540495687 140 SSGMDSAALKEEIATLKYETKS 161
Cdd:TIGR04523 208 KKIQKNKSLESQISELKKQNNQ 229
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
30-176 |
3.56e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 39.81 E-value: 3.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 30 RKDGVNKIADLKQEIFSLKKSKMIDPVEKQRLISEKKDEIEKAKVVAAKNKTEEIRVEKEAVAYANTISKEYIAQVVQAE 109
Cdd:COG3883 120 RLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLA 199
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2540495687 110 NESIAKHKQDFAQEVLKIKSESAEKENKLKSSGMDSAALKEEIATLKYETKSALFDAKSRLSSAVGR 176
Cdd:COG3883 200 ELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAGAGAAGAAGAAAGSAGAAG 266
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
7-177 |
3.60e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 40.43 E-value: 3.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 7 VAEIKSLDEDEK--------LRGYSETLHNLRKdgvnKIADLKQEIFSLKK--SKMIDPVEKQRLISEKKDEIEKaKVVA 76
Cdd:PRK03918 282 VKELKELKEKAEeyiklsefYEEYLDELREIEK----RLSRLEEEINGIEEriKELEEKEERLEELKKKLKELEK-RLEE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 77 AKNKTEEIRVEKEAVAYANTISKE---YIAQVVQAENESIAKHKQDFAQEVLKIKSESAEkenklkssgmdsaaLKEEIA 153
Cdd:PRK03918 357 LEERHELYEEAKAKKEELERLKKRltgLTPEKLEKELEELEKAKEEIEEEISKITARIGE--------------LKKEIK 422
|
170 180
....*....|....*....|....
gi 2540495687 154 TLKyetksalfDAKSRLSSAVGRC 177
Cdd:PRK03918 423 ELK--------KAIEELKKAKGKC 438
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
26-163 |
6.37e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 38.37 E-value: 6.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2540495687 26 LHNLRKDGVNKIADLKQEIFSLKKS-----KMIDpvEKQRLISEKKDEIEKAKVVAAKNKT--EEIRVEKEAVAyantis 98
Cdd:COG1579 22 LEHRLKELPAELAELEDELAALEARleaakTELE--DLEKEIKRLELEIEEVEARIKKYEEqlGNVRNNKEYEA------ 93
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2540495687 99 keyiaqvVQAENESIAKHKQDFAQEVLKIKSESAEKENKLKSSGMDSAALKEEIATLKYETKSAL 163
Cdd:COG1579 94 -------LQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEEL 151
|
|
| |
