|
Name |
Accession |
Description |
Interval |
E-value |
| PstC |
COG0573 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
98-414 |
4.37e-115 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440338 [Multi-domain] Cd Length: 303 Bit Score: 338.22 E-value: 4.37e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 98 RTISPGLQARNIVERWIRGLLLAASLISILTTVGIVVSILFEAIKFFQLVSFWDFLTGTQWSPDTAflggagrggeavaK 177
Cdd:COG0573 4 SRLRPRRRRRRLGDRLFRGLLLLAALLSILILLLIVLFLLIESLPAFQEVGLLEFLTGTEWNPVSS-------------N 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 178 PDFGSVPIFAGTFMITAIAMVVAVPIGLFAAIFMSEYATHSMRGAMKPMLEILAGIPTVVYGFFAAITVSPLvvqLAESL 257
Cdd:COG0573 71 GEFGILPLIVGTLLVSLIALLIAVPLGLGIAIFLSEYAPPRLRRILKPAIELLAGIPSVVYGFWGLFVLVPL---LRDLF 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 258 GLEADYTNALTPGLVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGE 337
Cdd:COG0573 148 PWPPSGFSLLTAGIVLAIMILPTITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGE 227
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2494100605 338 TMIVVMAAGLRPNLTWNPLEGMTTVTVRIVdALTGDQAFDSPETLSAFGLGLVLLMVTLTLNIVSTIVIRKFKQKYE 414
Cdd:COG0573 228 TMAVLMVAGNAPQIPFSLFDPGRTLTALIA-LEFGEAPFGSLHYSALFALGLVLFVITLLVNLLARLIVRRYREKYG 303
|
|
| phosphate_pstC |
TIGR02138 |
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ... |
111-410 |
5.96e-79 |
|
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273992 [Multi-domain] Cd Length: 295 Bit Score: 245.64 E-value: 5.96e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 111 ERWIRGLLLAASLISILTTVGIVVSILFEAIKFFQLVSFWDFLTGTQWSPdtaflggagrgGEAVAKPDFGSVPIFAGTF 190
Cdd:TIGR02138 1 EKIFKGLLLFSAVIIVLVLLLIVLFLLYEAIPAFEKNGILNFLTGTVWDP-----------GSGPVQEQYGALPLIVGTL 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 191 MITAIAMVVAVPIGLFAAIFMSEYATHSMRGAMKPMLEILAGIPTVVYGFFAAITVSPLVVQ-----LAESLGLE-ADYT 264
Cdd:TIGR02138 70 ITSLIALLIAVPVGIGIAIFLSEIAPKRVRSVLKPVVELLAGIPSVVYGFWGLFVLVPFLKPhfqpfLGSNLGLIpLFGG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 265 NALTPGLVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGETMIVVMA 344
Cdd:TIGR02138 150 PILTAGIVLAIMILPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMV 229
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2494100605 345 AGLR-PNLTWNPLEGMTTVTVRIVDALtGDQAFDSPETLSAFGLGLVLLMVTLTLNIVSTIVIRKFK 410
Cdd:TIGR02138 230 IGNVfPISPLSLFDPGTTITSLIANQF-GEASGGSVHTSALFALGLVLFVITLLVNILARYIVRRRR 295
|
|
| pstC |
PRK11275 |
phosphate ABC transporter permease PstC; |
116-346 |
8.42e-22 |
|
phosphate ABC transporter permease PstC;
Pssm-ID: 183070 Cd Length: 319 Bit Score: 95.15 E-value: 8.42e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 116 GLLLAASLISILTTVGIVVSILFEAIKFFQLVSFwDFLTGTQWSPDTAFLGGAgrggeavakpdfgsVPIFaGTFMITAI 195
Cdd:PRK11275 21 ALVKLAALITLLLLGGIIVSLIISSWPSIQKFGL-SFLWTKEWDAPNDIYGAL--------------VPIY-GTLVTSFI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 196 AMVVAVPIGLFAAIFMSEYATHSMRGAMKPMLEILAGIPTVVYGFFAAITVSPLVVQ-----LAESLG----LEADYTNA 266
Cdd:PRK11275 85 ALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFVFAPLFATyfqepVGNVLSnipiVGALFSGP 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 267 ------LTPGLVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGETMI 340
Cdd:PRK11275 165 afgigiLAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGETMA 244
|
....*.
gi 2494100605 341 VVMAAG 346
Cdd:PRK11275 245 VTFIIG 250
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
186-346 |
1.59e-13 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 68.84 E-value: 1.59e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 186 FAGTFMITAIAMVVAVPIGLFAAIFMSEYaTHSMRGAMKPMLEILAGIPTVVYGFFaaitvspLVVQLAESLGLEADYTN 265
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARK-RGKLDRLLRRIIDLLLSLPSLVLGLL-------LVLLFGVLLGWGILPGL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 266 ALTPGLVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGETMIVVMAA 345
Cdd:cd06261 73 GLPALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLG 152
|
.
gi 2494100605 346 G 346
Cdd:cd06261 153 G 153
|
|
| DUF3708 |
pfam12501 |
Phosphate ATP-binding cassette transporter; This domain family is found in bacteria, and is ... |
10-68 |
2.11e-08 |
|
Phosphate ATP-binding cassette transporter; This domain family is found in bacteria, and is typically between 143 and 173 amino acids in length. The family is found in association with pfam00528. There is a single completely conserved residue P that may be functionally important.
Pssm-ID: 432598 Cd Length: 165 Bit Score: 53.45 E-value: 2.11e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2494100605 10 FLGVLPLGAMAYYIGRNKASAKESQEGRRLHSRPGAYGWYAVIWMAAPAVALNGIAALL 68
Cdd:pfam12501 1 LLILLLLGAIGFVLGRSRALALAGGDSRSLHSLPGYYGAYVALWAALPALLVLAVWLLF 59
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
200-346 |
1.27e-05 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 45.37 E-value: 1.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 200 AVPIGLFAAIFMSEYAthsmRGAMKPMLEILAGIPTVVygffaaitVSPLVVQLAESLGLEADYTNALTPGLVMgimIIP 279
Cdd:pfam00528 1 GIPLGIIAALRRGRRL----DRLLRPLIDLLQALPSFV--------LAILLVVIAILSILGHGILPAIILALLG---WAG 65
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2494100605 280 FVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGETMIVVMAAG 346
Cdd:pfam00528 66 YARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGS 132
|
|
| ABC_perm1 |
NF038017 |
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ... |
193-346 |
2.85e-03 |
|
ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.
Pssm-ID: 411610 [Multi-domain] Cd Length: 184 Bit Score: 38.68 E-value: 2.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 193 TAIAMVVAVPIGLFAAIfmseyATHSMRGAMKPMLEILAGIPTVVYGFFAAITVS---PLvvqlaESLGLeadytnALTP 269
Cdd:NF038017 9 TLIAALIGIPLGALLAL-----RRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSrsgPL-----GFLGL------LYTP 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 270 G---LVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALpGIVSAVLLAVSRALGETMIVVMAAG 346
Cdd:NF038017 73 TamiIAQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALWTLLKEARF-ALLAAVLAGFGRAISEVGAVMMVGG 151
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PstC |
COG0573 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
98-414 |
4.37e-115 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440338 [Multi-domain] Cd Length: 303 Bit Score: 338.22 E-value: 4.37e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 98 RTISPGLQARNIVERWIRGLLLAASLISILTTVGIVVSILFEAIKFFQLVSFWDFLTGTQWSPDTAflggagrggeavaK 177
Cdd:COG0573 4 SRLRPRRRRRRLGDRLFRGLLLLAALLSILILLLIVLFLLIESLPAFQEVGLLEFLTGTEWNPVSS-------------N 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 178 PDFGSVPIFAGTFMITAIAMVVAVPIGLFAAIFMSEYATHSMRGAMKPMLEILAGIPTVVYGFFAAITVSPLvvqLAESL 257
Cdd:COG0573 71 GEFGILPLIVGTLLVSLIALLIAVPLGLGIAIFLSEYAPPRLRRILKPAIELLAGIPSVVYGFWGLFVLVPL---LRDLF 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 258 GLEADYTNALTPGLVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGE 337
Cdd:COG0573 148 PWPPSGFSLLTAGIVLAIMILPTITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGE 227
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2494100605 338 TMIVVMAAGLRPNLTWNPLEGMTTVTVRIVdALTGDQAFDSPETLSAFGLGLVLLMVTLTLNIVSTIVIRKFKQKYE 414
Cdd:COG0573 228 TMAVLMVAGNAPQIPFSLFDPGRTLTALIA-LEFGEAPFGSLHYSALFALGLVLFVITLLVNLLARLIVRRYREKYG 303
|
|
| phosphate_pstC |
TIGR02138 |
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ... |
111-410 |
5.96e-79 |
|
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273992 [Multi-domain] Cd Length: 295 Bit Score: 245.64 E-value: 5.96e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 111 ERWIRGLLLAASLISILTTVGIVVSILFEAIKFFQLVSFWDFLTGTQWSPdtaflggagrgGEAVAKPDFGSVPIFAGTF 190
Cdd:TIGR02138 1 EKIFKGLLLFSAVIIVLVLLLIVLFLLYEAIPAFEKNGILNFLTGTVWDP-----------GSGPVQEQYGALPLIVGTL 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 191 MITAIAMVVAVPIGLFAAIFMSEYATHSMRGAMKPMLEILAGIPTVVYGFFAAITVSPLVVQ-----LAESLGLE-ADYT 264
Cdd:TIGR02138 70 ITSLIALLIAVPVGIGIAIFLSEIAPKRVRSVLKPVVELLAGIPSVVYGFWGLFVLVPFLKPhfqpfLGSNLGLIpLFGG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 265 NALTPGLVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGETMIVVMA 344
Cdd:TIGR02138 150 PILTAGIVLAIMILPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMV 229
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2494100605 345 AGLR-PNLTWNPLEGMTTVTVRIVDALtGDQAFDSPETLSAFGLGLVLLMVTLTLNIVSTIVIRKFK 410
Cdd:TIGR02138 230 IGNVfPISPLSLFDPGTTITSLIANQF-GEASGGSVHTSALFALGLVLFVITLLVNILARYIVRRRR 295
|
|
| PstA |
COG0581 |
ABC-type phosphate transport system, permease component [Inorganic ion transport and ... |
124-366 |
4.55e-43 |
|
ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440346 [Multi-domain] Cd Length: 259 Bit Score: 151.34 E-value: 4.55e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 124 ISILTTVGIVVSILFEAIKFFQlvsfWDFLTGTqwSPDTAFLGGAGrggeavakpdfgsvPIFAGTFMITAIAMVVAVPI 203
Cdd:COG0581 1 LALLPLVWILGTVLVKGLPALS----WEFLTSS--PSPGPEGGGIL--------------PAIVGTLLLVLLATLIAVPL 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 204 GLFAAIFMSEYATHS-MRGAMKPMLEILAGIPTVVYGFFA-AITVSPLVVQlaeslgleadyTNALTPGLVMGIMIIPFV 281
Cdd:COG0581 61 GVLAAIYLAEYARGGrLARLIRFAIDVLAGVPSIVYGLFGyALFVLTLGLG-----------FSLLAGALALALLMLPVV 129
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 282 SSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGETMIVVMAAGLRPNLTWNPLEGMTT 361
Cdd:COG0581 130 IRTTEEALRLVPNSLREASYALGATKWQTIRKVVLPAALPGILTGVILAIARAAGETAPLLFTAGVSPFLPLSLFDPFAT 209
|
....*
gi 2494100605 362 VTVRI 366
Cdd:COG0581 210 LPVHI 214
|
|
| 3a0107s02c |
TIGR00974 |
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ... |
116-410 |
2.61e-36 |
|
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]
Pssm-ID: 273373 Cd Length: 271 Bit Score: 133.90 E-value: 2.61e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 116 GLLLAASLISILTTVGIVVSILFEAIKFFQLVSFWDFLTGTqwspdtaflggagrggeavakPDFGSV-PIFAGTFMITA 194
Cdd:TIGR00974 6 FISLLSALLALLPLIWILWYILIKGLPALNLEFFTKSPTPT---------------------GAEGGIgPAIVGTLLLTL 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 195 IAMVVAVPIGLFAAIFMSEYATHSMRGAM-KPMLEILAGIPTVVYGFFAAItvspLVVQLAESLGLeadytNALTPGLVM 273
Cdd:TIGR00974 65 LAIVIAVPLGIGAAIYLAEYANGSRFTKIiRFAVDILAGVPSIVVGLFGYG----FFVLTYLGGGF-----SLLAGALAL 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 274 GIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGETM-IVVMAAGLRPNLT 352
Cdd:TIGR00974 136 ALLILPVIIRTTEEALKAVPKDLREASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETApLLFTAGGSAFTPP 215
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 2494100605 353 WNPLEgMTTVTVRIVDALTgdQAFDSPETLSAFGLGLVLLMVTLTLNIVSTIVIRKFK 410
Cdd:TIGR00974 216 NLFDP-FATLPVLIYNLAS--EGPYVEAQQLAWAAALVLIVLVLLLNLIARLLRRRFK 270
|
|
| COG4590 |
COG4590 |
ABC-type uncharacterized transport system, permease component [General function prediction ... |
178-361 |
5.45e-30 |
|
ABC-type uncharacterized transport system, permease component [General function prediction only];
Pssm-ID: 443647 [Multi-domain] Cd Length: 757 Bit Score: 122.26 E-value: 5.45e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 178 PDFGSVPIFAGTFMITAIAMVVAVPIGLFAAI----FMSEyathSMRGAMKPMLEILAGIPTVVYGFFA----------- 242
Cdd:COG4590 447 PKFSLVPLTFGTLKAAFYAMLFAVPLAIAGAIytayFMSP----KMRGVVKPTIEIMEALPTVILGFLAglwlapfveen 522
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 243 ----------------------------------------------------AITVSPLVVQ----------LAESLGLE 260
Cdd:COG4590 523 lpgvfslllllplgillfaylwsrlpesirnrvpegweaallipvillvgwlCFALSPPIENaffggdmrqwLTNELGIT 602
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 261 ADYTNALTPGLVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGETMI 340
Cdd:COG4590 603 FDQRNALVVGIAMGFAVIPTIFSIAEDAIFSVPKHLTQGSLALGATPWQTLTRVVLLTASPGIFSAVMIGLGRAVGETMI 682
|
250 260
....*....|....*....|.
gi 2494100605 341 VVMAAGLRPNLTWNPLEGMTT 361
Cdd:COG4590 683 VLMATGNTPVMDFNIFEGMRT 703
|
|
| pstC |
PRK11275 |
phosphate ABC transporter permease PstC; |
116-346 |
8.42e-22 |
|
phosphate ABC transporter permease PstC;
Pssm-ID: 183070 Cd Length: 319 Bit Score: 95.15 E-value: 8.42e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 116 GLLLAASLISILTTVGIVVSILFEAIKFFQLVSFwDFLTGTQWSPDTAFLGGAgrggeavakpdfgsVPIFaGTFMITAI 195
Cdd:PRK11275 21 ALVKLAALITLLLLGGIIVSLIISSWPSIQKFGL-SFLWTKEWDAPNDIYGAL--------------VPIY-GTLVTSFI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 196 AMVVAVPIGLFAAIFMSEYATHSMRGAMKPMLEILAGIPTVVYGFFAAITVSPLVVQ-----LAESLG----LEADYTNA 266
Cdd:PRK11275 85 ALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFVFAPLFATyfqepVGNVLSnipiVGALFSGP 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 267 ------LTPGLVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGETMI 340
Cdd:PRK11275 165 afgigiLAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGETMA 244
|
....*.
gi 2494100605 341 VVMAAG 346
Cdd:PRK11275 245 VTFIIG 250
|
|
| pstA |
PRK11268 |
phosphate ABC transporter permease PstA; |
187-338 |
6.54e-15 |
|
phosphate ABC transporter permease PstA;
Pssm-ID: 183065 [Multi-domain] Cd Length: 295 Bit Score: 74.72 E-value: 6.54e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 187 AGTFMITAIAMVVAVPIGLFAAIFMSEYATHSMRGAMKPML-EILAGIPTVVYGFFaaitVSPLVVQLAESLgleadytN 265
Cdd:PRK11268 84 AGSGLLILWATVVGTPLGIMAGIYLAEYGRKSWLAEVIRFInDILLSAPSIVVGLF----VYTIVVAQMEHF-------S 152
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2494100605 266 ALTPGLVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGET 338
Cdd:PRK11268 153 GWAGVIALALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGVLLAIARIAGET 225
|
|
| modB_ABC |
TIGR02141 |
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ... |
189-373 |
1.54e-13 |
|
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]
Pssm-ID: 273993 [Multi-domain] Cd Length: 208 Bit Score: 69.19 E-value: 1.54e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 189 TFMITAIAMVVAVPIGLFAAIFMSEYathsmRGAMKPMLEILAGIPTV----VYGFFAAITVSP--LVVQLAESLGLEAD 262
Cdd:TIGR02141 3 SLKVAVIATLLLLPLGIPVAWLLARS-----RFRGKPLLEVLVTLPLVlpptVLGFYLLIAFGPngPIGKLLELFGISLV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 263 YTnalTPGLVMGIMI--IPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGETMI 340
Cdd:TIGR02141 78 FT---FTGAVLASVIvsFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGA 154
|
170 180 190
....*....|....*....|....*....|...
gi 2494100605 341 VVMAAGLRPNLTwnplegmTTVTVRIVDALTGD 373
Cdd:TIGR02141 155 TLMFAGNIPGET-------QTIPLAIYDAVESD 180
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
186-346 |
1.59e-13 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 68.84 E-value: 1.59e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 186 FAGTFMITAIAMVVAVPIGLFAAIFMSEYaTHSMRGAMKPMLEILAGIPTVVYGFFaaitvspLVVQLAESLGLEADYTN 265
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARK-RGKLDRLLRRIIDLLLSLPSLVLGLL-------LVLLFGVLLGWGILPGL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 266 ALTPGLVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGETMIVVMAA 345
Cdd:cd06261 73 GLPALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLG 152
|
.
gi 2494100605 346 G 346
Cdd:cd06261 153 G 153
|
|
| ModB |
COG4149 |
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ... |
189-346 |
1.48e-09 |
|
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis
Pssm-ID: 443320 [Multi-domain] Cd Length: 223 Bit Score: 57.75 E-value: 1.48e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 189 TFMITAIAMVVAVPIGLFAAIFMSEYathsmRGAMKPMLEILAGIPTV----VYGFFAAITV---SPLVVQLAESLGLEA 261
Cdd:COG4149 12 SLKVALIATLLLLLLGIPLAWWLART-----RFRGKGLLEALVTLPLVlpptVLGFYLLLLFgrnGPLGQLLEELFGISL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 262 DYTnalTPGLVMG--IMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGETM 339
Cdd:COG4149 87 VFT---WTGAVLAsvVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEFG 163
|
....*..
gi 2494100605 340 IVVMAAG 346
Cdd:COG4149 164 ATLMFAG 170
|
|
| DUF3708 |
pfam12501 |
Phosphate ATP-binding cassette transporter; This domain family is found in bacteria, and is ... |
10-68 |
2.11e-08 |
|
Phosphate ATP-binding cassette transporter; This domain family is found in bacteria, and is typically between 143 and 173 amino acids in length. The family is found in association with pfam00528. There is a single completely conserved residue P that may be functionally important.
Pssm-ID: 432598 Cd Length: 165 Bit Score: 53.45 E-value: 2.11e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2494100605 10 FLGVLPLGAMAYYIGRNKASAKESQEGRRLHSRPGAYGWYAVIWMAAPAVALNGIAALL 68
Cdd:pfam12501 1 LLILLLLGAIGFVLGRSRALALAGGDSRSLHSLPGYYGAYVALWAALPALLVLAVWLLF 59
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
189-346 |
1.08e-07 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 52.81 E-value: 1.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 189 TFMITAIAMVVAVPIGLFAAifmseYATHSMRGAMKPMLEILAGIPTVVYGFFAAITVSPLVVQLAESLGLeadytnalt 268
Cdd:COG1177 66 SLLIALLSTLLATVLGTPAA-----LALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGL--------- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 269 PGLVMG--IMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGETMIVVMAAG 346
Cdd:COG1177 132 WGLILAhvVFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAG 211
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
233-346 |
1.56e-06 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 48.86 E-value: 1.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 233 IPTVVYGFFAAITVSP--LVVQLAESLGLEADYTNaLTPGLVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSET 310
Cdd:CHL00187 103 LPTSVAGLTLATVYGDngWIGHLLSHLGIQIVFTK-LGVLLAMIFVSFPFVVRTIQPVLQEIEKELEEAAWSLGASPWQT 181
|
90 100 110
....*....|....*....|....*....|....*.
gi 2494100605 311 IKQVLLPAALPGIVSAVLLAVSRALGETMIVVMAAG 346
Cdd:CHL00187 182 FWKVIFPPLIPALLTGLALTFSRAIGEYGSIVIISS 217
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
200-346 |
1.27e-05 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 45.37 E-value: 1.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 200 AVPIGLFAAIFMSEYAthsmRGAMKPMLEILAGIPTVVygffaaitVSPLVVQLAESLGLEADYTNALTPGLVMgimIIP 279
Cdd:pfam00528 1 GIPLGIIAALRRGRRL----DRLLRPLIDLLQALPSFV--------LAILLVVIAILSILGHGILPAIILALLG---WAG 65
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2494100605 280 FVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALGETMIVVMAAG 346
Cdd:pfam00528 66 YARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGS 132
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
80-337 |
5.58e-05 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 45.15 E-value: 5.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 80 LLVPASGVLFIAGLGLGLRTISP----GLQARNIVERWIRGLLLAASLISILTTVGIVVSILFeaikffqLVSFWDFLTG 155
Cdd:COG1178 248 LLLLVLLLLLLERRLRRRRRYATvggrARRPRRVKLGRWRWLALALCLLLVLLGLLLPLLALL-------LWSLTKALDD 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 156 TQWSPDTAFLGGAGRGGEAvakpdfgsvpiFAGTFMITAIAMVVAVPIGLFAAifmseYATHSMRGAMKPMLEILAGIPT 235
Cdd:COG1178 321 NLTLDNYRFVLLDPSLLRA-----------LLNSLLLALLAALLAVLLALLLA-----YLVRRRRGRLARLLDRLAMLPY 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 236 VVYGFFAAITvspLVVQLAESLGLEADYTNALTPgLVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVL 315
Cdd:COG1178 385 AVPGIVLGLG---LLLLFNRPLPLLLYGTLAILV-LAYVVRFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVT 460
|
250 260
....*....|....*....|..
gi 2494100605 316 LPAALPGIVSAVLLAVSRALGE 337
Cdd:COG1178 461 LPLLRPGLLAAALLVFVTSMKE 482
|
|
| TauC |
COG0600 |
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ... |
194-345 |
4.30e-04 |
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440365 [Multi-domain] Cd Length: 254 Bit Score: 41.67 E-value: 4.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 194 AIAMVVAVPIGLFAAIFmseyatHSMRGAMKPMLEILAGIPTVVYGFFAAITVSplvvqlaeslgleadyTNALTPGLVM 273
Cdd:COG0600 75 ALAALLGVPLGLLLGLS------RLLRRLLDPLLVFLRPIPPLALAPLLILWFG----------------IGEASKIFVI 132
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2494100605 274 GIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAVSRALgetmIVVMAA 345
Cdd:COG0600 133 FLGAFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALGLAW----IGLVVA 200
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
162-376 |
4.52e-04 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 42.46 E-value: 4.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 162 TAFLGGAGRGGEAVAKPDFGSVpiFAGTFMITAIAMVVAVPIGLFAAifmseYATHSMRGAMKPMLEILAGIPTVVYGFF 241
Cdd:COG1178 34 RAFTDGLANFWALLSDPYLWRA--LGNTLLLALLVTLLSLLLGVPLA-----WLLARTDFPGRRLLRWLLLLPLALPPYV 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 242 AAITVS-------PLVVQLAESLGLEADYTNALTPG-LVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQ 313
Cdd:COG1178 107 VALAWIalfgpngLLNTLLRALFGLEPPDIYGLGGIiLVLVLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRR 186
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2494100605 314 VLLPAALPGIVSAVLLAVSRALGETMIVVMAAGlrpnltwnpleGMTTVTVRIVDALTGDQAF 376
Cdd:COG1178 187 VTLPLLRPAIAAGALLVFLLCLADFGTPLVLGG-----------GYTTLTTAIYQAWLGDFDL 238
|
|
| PRK10782 |
PRK10782 |
D-methionine ABC transporter permease MetI; |
256-327 |
9.49e-04 |
|
D-methionine ABC transporter permease MetI;
Pssm-ID: 182726 Cd Length: 217 Bit Score: 40.49 E-value: 9.49e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2494100605 256 SLGLEAdytnALTPglvMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAV 327
Cdd:PRK10782 86 SIGLQA----AIVP---LTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAA 150
|
|
| MetP |
COG2011 |
ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; ... |
275-331 |
2.35e-03 |
|
ABC-type methionine transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 441614 Cd Length: 220 Bit Score: 39.27 E-value: 2.35e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 2494100605 275 IMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALPGIVSAVLLAV 331
Cdd:COG2011 101 IAAIPFFARLVENALREVDPGVIEAAQAMGASPWQIIFKVLLPEALPSLILGLTVTL 157
|
|
| ABC_perm1 |
NF038017 |
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ... |
193-346 |
2.85e-03 |
|
ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.
Pssm-ID: 411610 [Multi-domain] Cd Length: 184 Bit Score: 38.68 E-value: 2.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 193 TAIAMVVAVPIGLFAAIfmseyATHSMRGAMKPMLEILAGIPTVVYGFFAAITVS---PLvvqlaESLGLeadytnALTP 269
Cdd:NF038017 9 TLIAALIGIPLGALLAL-----RRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSrsgPL-----GFLGL------LYTP 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2494100605 270 G---LVMGIMIIPFVSSLSDDVISAVPQSLREGSYALGTTRSETIKQVLLPAALpGIVSAVLLAVSRALGETMIVVMAAG 346
Cdd:NF038017 73 TamiIAQAVLALPIVAGLTLAAVQGLDPELRLQILSLGATRWQALWTLLKEARF-ALLAAVLAGFGRAISEVGAVMMVGG 151
|
|
| |
