MULTISPECIES: hypothetical protein [Thermoanaerobacter]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| P-loop_NTPase super family | cl38936 | P-loop containing Nucleoside Triphosphate Hydrolases; Members of the P-loop NTPase domain ... |
1-28 | 4.63e-05 | ||
P-loop containing Nucleoside Triphosphate Hydrolases; Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a hydrophobic residue). The Walker A and B motifs bind the beta-gamma phosphate moiety of the bound nucleotide (typically ATP or GTP) and the Mg2+ cation, respectively. The P-loop NTPases are involved in diverse cellular functions, and they can be divided into two major structural classes: the KG (kinase-GTPase) class which includes Ras-like GTPases and its circularly permutated YlqF-like; and the ASCE (additional strand catalytic E) class which includes ATPase Binding Cassette (ABC), DExD/H-like helicases, 4Fe-4S iron sulfur cluster binding proteins of NifH family, RecA-like F1-ATPases, and ATPases Associated with a wide variety of Activities (AAA). Also included are a diverse set of nucleotide/nucleoside kinase families. The actual alignment was detected with superfamily member PRK06526: Pssm-ID: 476819 Cd Length: 254 Bit Score: 37.16 E-value: 4.63e-05
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| Name | Accession | Description | Interval | E-value | ||
| PRK06526 | PRK06526 | transposase; Provisional |
1-28 | 4.63e-05 | ||
transposase; Provisional Pssm-ID: 180607 Cd Length: 254 Bit Score: 37.16 E-value: 4.63e-05
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| IstB_IS21 | pfam01695 | IstB-like ATP binding protein; This protein contains an ATP/GTP binding P-loop motif. It is ... |
1-29 | 6.90e-05 | ||
IstB-like ATP binding protein; This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function. Pssm-ID: 426385 [Multi-domain] Cd Length: 238 Bit Score: 36.65 E-value: 6.90e-05
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| DnaC | COG1484 | DNA replication protein DnaC [Replication, recombination and repair]; |
1-29 | 1.54e-04 | ||
DNA replication protein DnaC [Replication, recombination and repair]; Pssm-ID: 441093 [Multi-domain] Cd Length: 242 Bit Score: 35.53 E-value: 1.54e-04
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| Name | Accession | Description | Interval | E-value | ||
| PRK06526 | PRK06526 | transposase; Provisional |
1-28 | 4.63e-05 | ||
transposase; Provisional Pssm-ID: 180607 Cd Length: 254 Bit Score: 37.16 E-value: 4.63e-05
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| IstB_IS21 | pfam01695 | IstB-like ATP binding protein; This protein contains an ATP/GTP binding P-loop motif. It is ... |
1-29 | 6.90e-05 | ||
IstB-like ATP binding protein; This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function. Pssm-ID: 426385 [Multi-domain] Cd Length: 238 Bit Score: 36.65 E-value: 6.90e-05
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| PRK09183 | PRK09183 | transposase/IS protein; Provisional |
8-28 | 1.27e-04 | ||
transposase/IS protein; Provisional Pssm-ID: 181681 Cd Length: 259 Bit Score: 35.84 E-value: 1.27e-04
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| DnaC | COG1484 | DNA replication protein DnaC [Replication, recombination and repair]; |
1-29 | 1.54e-04 | ||
DNA replication protein DnaC [Replication, recombination and repair]; Pssm-ID: 441093 [Multi-domain] Cd Length: 242 Bit Score: 35.53 E-value: 1.54e-04
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| Blast search parameters | ||||
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