|
Name |
Accession |
Description |
Interval |
E-value |
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
74-720 |
3.73e-141 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 428.14 E-value: 3.73e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 74 GLTARETPRSVDIISARAIQQRGDRSLAAAVEHATGLSGVASP-TLSNNFSARGFRPIA-WLYNGVEMPGSTLQlgDPAH 151
Cdd:COG4774 3 DTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEgGNGDSFSIRGFSASGdIYVDGLRDPGQYRR--DTFN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 152 YDSIEVLRGPGSALNGLSAAGGSVNLISRRPTFNRQpFELDYGLGSYRSQRLHLGAGGALVDDVmAYRLDVSGNDSGSNV 231
Cdd:COG4774 81 LERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPF-TEVTLTYGSDGQRRATLDVNGPLGDDL-AYRLNGMYRDSDSYR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 232 QYERDRQKRVSGSLLFKLTDDALLTLSLDRmLNRTNNPYYGTPLL-NGRIAGELRDINYNNlTDSRIQSNATAFQASLDW 310
Cdd:COG4774 159 DGVDNDRWGIAPSLTWRLGDRTRLTLDYEY-QDDDRTPDYGVPAVaNGRPVDVDRSTFYGQ-PDDYSDSETDSATLRLEH 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 311 FMTPEVEWHNQFYYYSGFREWRNVERFRVAAAawpGDVNRDSFGAlAHDDDLIGNRSSLVFDRAIAGFDNRLLVGFDLSK 390
Cdd:COG4774 237 DFNDNWTLRNALRYSDYDRDYRNTYPTGGNAT---GTVTRSAYRR-DQDNDTLSNQTDLTGKFDTGGVKHTLLAGVEYSR 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 391 RHFQYYSNGFPGS-EDVPLGAPPREPFAQGTASQRAPvRHVTQNQYAAFLEDRFSLTERLALLGQLRYNHMNMDWRFQGP 469
Cdd:COG4774 313 EDSDNARYSGGGTaPTVNLYNPVYGAPVTGPTLGGAD-NDSRTDTTGLYLQDTISLTDRWSLLAGLRYDRFDTDYTDRTT 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 470 QEESRARTYVFSTWSLGPSYALTDNLTLYANYTTGQEPGNDLFFLSPTQTDLPLTRARQWEAGAKGQFWDNKGEATLALY 549
Cdd:COG4774 392 GATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAPSLSNAGQALDPEKSRQYEVGVKWDLLDGRLSLTAALF 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 550 ELRKDNLFVPDAQRPDALNAVGRQTSRGIELGVVLRPDDRWELAGNAAYTHARYDDYRGGsplrSYNGNRPAYIPDWTAN 629
Cdd:COG4774 472 RIEKTNVRTTDPANPGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANA----ANVGNRLPNVPRHSAS 547
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 630 LSVHYQATAR-LGLASSLRYVGSSYNDDANQRKMRAYTTLDLAADYQLTPIVDVGFRIRNATNQLYAYQRTYPDQALIAP 708
Cdd:COG4774 548 LWTTYDLPLPgLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLNKNLTLRLNVNNLTDKRYYASAYGSGYVTPGA 627
|
650
....*....|..
gi 2310150666 709 PRSYETFVSVRF 720
Cdd:COG4774 628 PRTVLLSASYRF 639
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
83-720 |
2.91e-72 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 246.98 E-value: 2.91e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 83 SVDIISARAIQQRGDRSLAAAVEHATGLSGVA-SPTLSNNFSARGFRP--IAWLYNGVEMPGST------LQLGDPAHYD 153
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRgGGGGGSTISIRGFGPdrTLVLVDGLPLASSNygrgvdLNTIPPELIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 154 SIEVLRGPGSALNGLSAAGGSVNLISRRPT-FNRQPFELDYG-LGSYRSQRLHLGAGGALV-DDVMAYRLDVSGNDSGS- 229
Cdd:cd01347 81 RVEVLKGPSSALYGSGAIGGVVNIITKRPTdEFGGSVTAGYGsDNSGSSGGGGFDVSGALAdDGAFGARLYGAYRDGDGt 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 230 -NVQYERDRQKR----VSGSLLFKLTDDALLTLSLDRmLNRTNNPYYGTPLLNGRIAGELRDINYNNLTDSRIQSNATAF 304
Cdd:cd01347 161 iDGDGQADDSDEerynVAGKLDWRPDDDTRLTLDAGY-QDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDRYR 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 305 QASLDWFMTPEVEWHNQFYYYSGFRE---WRNVERFRVAAAAWPGDVNRDSFGAlAHDDDLIGNRSSLVFDRAIAGFDNR 381
Cdd:cd01347 240 KRASLGLEHDLNDTGWTLRANLSYSYtdnDGDPLILNGGNNAAGGDLGRSGYSS-ERDTTQLGFDAGLNAPFGTGPVAHT 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 382 LLVGFDLSKRHFqyysngfpgsedvplgapprepfaqgtasqrapvrhvTQNQYAAFLEDRFSLTERLALLGQLRYNHMN 461
Cdd:cd01347 319 LTLGVEYRREEL-------------------------------------DEKQTALYAQDTIELTDDLTLTLGLRYDHYD 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 462 MDWRFQGPQEESRARTYVFSTWSLGPSYALTDNLTLYANYTTGQEPGN--DLFFLSPTQ-------TDLPLTRARQWEAG 532
Cdd:cd01347 362 QDSKDTIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSlgELYGGGSHGgtaavgnPNLKPEKSKQYELG 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 533 AKGQfWDNKGEATLALYELRKDNLFVPDAQRPDALN-----AVGRQTSRGIELGVVLRPDDRWELAGNAAYTHARYDDYR 607
Cdd:cd01347 442 LKYD-PGDGLTLSAALFRIDIKNEIVSTPTNTGLGLvtvyvNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRTD 520
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 608 GgsplrSYNGNRPAYIPDWTANLSVHYQATA-RLGLASSLRYVGSSYNDDA---NQRKMRAYTTLDLAADYQLTPIVDVG 683
Cdd:cd01347 521 G-----ATTGNRLPGIPKHTANLGLDYELPDeGLTAGGGVRYRGKQYADTAngnNTVKVPGYTLVDLSASYQFTKNLTLR 595
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 2310150666 684 FRIRNATNQLY---AYQRTYPDQALIAPPRSYETFVSVRF 720
Cdd:cd01347 596 LGVNNLFDKDYytsLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
79-720 |
1.51e-53 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 195.71 E-value: 1.51e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 79 ETPRSVDIISARAIQQRGDRSLAAAVEHATGLSGVASPTLSN--NFSARGFrPIAWLYNGVEMPGSTLQLG------DPA 150
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQfgNITIRGF-GLEVDIDNVYLDGVPLLSRgnlaivDPA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 151 HYDSIEVLRGPGSALNGLSAAGGSVNLISRRPTFNrQPFELDYGLGSYRSQRLHLGAGGAL-VDDVMAYRLDVSGNDSGS 229
Cdd:TIGR01783 80 MVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDE-PKGSVTFGAGTRSGYRTAFDLGGPLgADGTFRGRLNGARQDGDS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 230 NVQYERDRQKRVSGSLLFKLTDDALLTLSLDRMLNRTNNPYYGTPLLNG---------RIAGELRDINYNNLTDSRIqSN 300
Cdd:TIGR01783 159 FYDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGtsgrdlssdRYLGTSSNRNYDDREYLSY-GL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 301 ATAFQASLDWFMTpevewHNQFYYYSGFReWRNVERFRVAAAawpGDVNRDSFGALAHDDDLIGNRSSLVFDRAIAGFDN 380
Cdd:TIGR01783 238 SLEYQFNDVWTGK-----QNLRYSYFDTD-SNQVQASGYSSD---GGLFGRSLTVVNVKQDRVQIDAGLDGEFETGPIEH 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 381 RLLVGFDLSKRHFQYYSNGfpGSEDVPLGAPPREPFAQGTASQRAPVRHVTQNQYA--AFLEDRFSLTERLALLGQLRYN 458
Cdd:TIGR01783 309 DLLLGVSYGQRTTNRFNNT--GYPSDNIYSLTATSSARTDIGDSPKDRALSSTTKAlnGVALQRILLADKWTLTLGGRYD 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 459 HMNMDwRFQGPQEESRARTYVFSTWSLGPSYALTDNLTLYANYTTGQEPGNDLFFLSPTQTD-LPLTRARQWEAGAKGQf 537
Cdd:TIGR01783 387 SVDVK-SNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDiLEPEKGKNYELGVRYD- 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 538 WDNKGEATLALYELRKDNLFVPDAQRPDALNAVGRQTSRGIELGVVLRPDDRWELAGNAAYTHARY-DDYRGGsplrsYN 616
Cdd:TIGR01783 465 LGDSLLATAALFRITKDNQLVQDPVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFtEDTNGD-----TQ 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 617 GNRPAYIPDWTANLSVHYQA---TARLGLASSLRYVGSSYNDDANQRKMRAYTTLDLAADYQLTPIVD--VGFRIRNATN 691
Cdd:TIGR01783 540 GNTVPFVPKHTASLWASYAPpvgDNGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKKKNltLALNVNNLFD 619
|
650 660 670
....*....|....*....|....*....|..
gi 2310150666 692 QLY--AYQRTYPDQALI-APPRSYETFVSVRF 720
Cdd:TIGR01783 620 RDYytSGYRWGPSAYIYpGAPRTVGLSVSYDF 651
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
266-720 |
7.94e-42 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 158.78 E-value: 7.94e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 266 TNNPYYGTPLLNGRIAGELRDINYNNLTDSRIQSNATAFQASLDWFMTPEVEWHNQFYYYSGFREWRNVERFRVAAAAwp 345
Cdd:pfam00593 25 TDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRYSSLDGDYTSNSSGLS-- 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 346 gdvnrdSFGALAHDDDLIGNRSSLVFDRAIAGFDNRLLVGFDLSKRHFQYYSNGFPGSedvplgapprePFAQGTASQRA 425
Cdd:pfam00593 103 ------GAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAY-----------DPYDPANPSSS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 426 PVRHVTQNQYAAFLEDRFSLTERLALLGQLRYNHMNMDWRFQGPQEESRARTYVFSTWSLGPSYALTDNLTLYANYTTGQ 505
Cdd:pfam00593 166 SYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGGGDNFSRSYSAFSPRLGLVYKPTDNLSLYASYSRGF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 506 E--PGNDLFFLSPTQT---------DLPLTRARQWEAGAKgqFWDNKGEATLALYELRKDNLFVPDAQRPDALNA----- 569
Cdd:pfam00593 246 RapSLGELYGSGSGGGggavaggnpDLKPETSDNYELGLK--YDDGRLSLSLALFYIDIKNLITSDPDGPGLGGTvytyt 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 570 -VGRQTSRGIELGVVLRPDDRWELAGNAAYTHARYDDYrggsplRSYNGNRPAYIPDWTANLSVHYQ-ATARLGLASSLR 647
Cdd:pfam00593 324 nVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDAD------ADDTGNPLPNVPRHTANLGLTYDfPLGGWGARLGAR 397
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2310150666 648 YVGSS---YNDDANQRKMRAYTTLDLAADYQLTPIVDVGFRIRNATNQLYAYQRTYPDQAL---IAPPRSYetFVSVRF 720
Cdd:pfam00593 398 YVGSGerrYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRYYSSGGGNLggyPGPGRTF--YLGLSY 474
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
3-676 |
1.29e-32 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 134.50 E-value: 1.29e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 3 TTRRRLGTPKKSLCLAAAWIGGALT--APLAFAADCDKarnatgcEEQLTVEAAaPAGRYDALNAVSRSASQIGLTA--- 77
Cdd:PRK10044 1 MARSKTAQPNHSLRKIAVVVATAVSgmSVYAQAAVEPK-------EETITVTAA-PAPQESAWGPAATIAAKRSATGtkt 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 78 ----RETPRSVDIISARAIQQRGDRSLAAAVEHATGLSgVASPTLSNNFSA---RGFRPIA-----WLyNGVEMPG---S 142
Cdd:PRK10044 73 dtpiEKTPQSISVVTAEEMALHQPKSVKEALSYTPGVS-VGTRGASNTYDHliiRGFAASGqsqnnYL-DGLKLQGnfyN 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 143 TLQLgDPAHYDSIEVLRGPGSALNGLSAAGGSVNLISRRPTfnRQPF-ELDYGLGSYRSQRLHLGAGGALVDD-VMAYRL 220
Cdd:PRK10044 151 DAVI-DPYMLERAELMRGPVSVLYGKSNPGGLLNMVSKRPT--TEPLkEVQFKMGTDNLFQTGFDFSDALDDDgVYSYRL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 221 dvSGNDSGSNVQYERDRQKR--VSGSLLFKLTDDALLTLsLDRMLNRTNNPYYG--------TPLLNG-RIAGELRDINY 289
Cdd:PRK10044 228 --TGLARSANAQQKGSEEQRyaIAPSFTWRPDDKTNFTF-LSYFQNEPETGYYGwlpkegtvEPLPNGkRLPTDFNEGAK 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 290 NNLTDSRIQSNATAFQASLDWFMTPEvewhnQFYYYSGFR-EWRNVERFRVAAAaWPGDVNRdsfgALAHDDDLIGNRS- 367
Cdd:PRK10044 305 NNTYSRNEKMVGYSFDHEFNDTFTVR-----QNLRYAENKtSQRSVYGYGVCSD-KGHYLNR----GYVVDDEKLQNFSv 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 368 --SLVFDRAIAGFDNRLLVGFDLSK-RHFQYYSNGFPGSED-VPLGAPPREPFAQGTASQraPVRHVT-QNQYAAFLEDR 442
Cdd:PRK10044 375 dtQLQSKFATGDVDHTLLTGVDFMRmRNDINAWFGYADSVPlLNLYGPVNTDFDFNANSG--PYQILNkQKQTGLYVQDQ 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 443 FSLTERLALLGQlRYNHMNMDWRFQGPQEESRARTYVFsTWSLGPSYALTDNLTLYANYTTGQEPGndlfflspTQTDLP 522
Cdd:PRK10044 453 AEWDKWLVTLGG-RYDWADQSSLNRVNGTTDKRDDKQF-TWRGGVNYLFDNGITPYFSYSESFEPS--------SGTGKD 522
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 523 -----LTRARQWEAGAKGQFWDNKGEATLALYELRKDNLFVPDAQRPDALNAVGRQTSRGIELGVVLRPDDRWELAGNAA 597
Cdd:PRK10044 523 gnifaPSKGKQYEAGVKYVPKDRPIVVTGAVYQLTKTNNLTADPENSFFSVQGGEIRARGVELEAKAALSANVNVTGSYT 602
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 598 YTHARYddyrggSPLRSYNGNRPAYIPDWTANL----SVHYQATARLGLASSLRYVGSSYNDDANQRKMRAYTTLDLAAD 673
Cdd:PRK10044 603 YTDAEY------TTDTTYKGNTPAQVPKHMASLwadyTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVK 676
|
...
gi 2310150666 674 YQL 676
Cdd:PRK10044 677 YDL 679
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
74-720 |
3.73e-141 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 428.14 E-value: 3.73e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 74 GLTARETPRSVDIISARAIQQRGDRSLAAAVEHATGLSGVASP-TLSNNFSARGFRPIA-WLYNGVEMPGSTLQlgDPAH 151
Cdd:COG4774 3 DTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEgGNGDSFSIRGFSASGdIYVDGLRDPGQYRR--DTFN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 152 YDSIEVLRGPGSALNGLSAAGGSVNLISRRPTFNRQpFELDYGLGSYRSQRLHLGAGGALVDDVmAYRLDVSGNDSGSNV 231
Cdd:COG4774 81 LERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPF-TEVTLTYGSDGQRRATLDVNGPLGDDL-AYRLNGMYRDSDSYR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 232 QYERDRQKRVSGSLLFKLTDDALLTLSLDRmLNRTNNPYYGTPLL-NGRIAGELRDINYNNlTDSRIQSNATAFQASLDW 310
Cdd:COG4774 159 DGVDNDRWGIAPSLTWRLGDRTRLTLDYEY-QDDDRTPDYGVPAVaNGRPVDVDRSTFYGQ-PDDYSDSETDSATLRLEH 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 311 FMTPEVEWHNQFYYYSGFREWRNVERFRVAAAawpGDVNRDSFGAlAHDDDLIGNRSSLVFDRAIAGFDNRLLVGFDLSK 390
Cdd:COG4774 237 DFNDNWTLRNALRYSDYDRDYRNTYPTGGNAT---GTVTRSAYRR-DQDNDTLSNQTDLTGKFDTGGVKHTLLAGVEYSR 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 391 RHFQYYSNGFPGS-EDVPLGAPPREPFAQGTASQRAPvRHVTQNQYAAFLEDRFSLTERLALLGQLRYNHMNMDWRFQGP 469
Cdd:COG4774 313 EDSDNARYSGGGTaPTVNLYNPVYGAPVTGPTLGGAD-NDSRTDTTGLYLQDTISLTDRWSLLAGLRYDRFDTDYTDRTT 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 470 QEESRARTYVFSTWSLGPSYALTDNLTLYANYTTGQEPGNDLFFLSPTQTDLPLTRARQWEAGAKGQFWDNKGEATLALY 549
Cdd:COG4774 392 GATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGAPSLSNAGQALDPEKSRQYEVGVKWDLLDGRLSLTAALF 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 550 ELRKDNLFVPDAQRPDALNAVGRQTSRGIELGVVLRPDDRWELAGNAAYTHARYDDYRGGsplrSYNGNRPAYIPDWTAN 629
Cdd:COG4774 472 RIEKTNVRTTDPANPGVYVQTGEQRSRGVELEATGELTPGWSVLAGYTYLDAEITKSANA----ANVGNRLPNVPRHSAS 547
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 630 LSVHYQATAR-LGLASSLRYVGSSYNDDANQRKMRAYTTLDLAADYQLTPIVDVGFRIRNATNQLYAYQRTYPDQALIAP 708
Cdd:COG4774 548 LWTTYDLPLPgLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLNKNLTLRLNVNNLTDKRYYASAYGSGYVTPGA 627
|
650
....*....|..
gi 2310150666 709 PRSYETFVSVRF 720
Cdd:COG4774 628 PRTVLLSASYRF 639
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
17-720 |
9.12e-141 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 428.93 E-value: 9.12e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 17 LAAAWIGGALTAPLAFAADCDKARNATgcEEQLTVEAAAPAGRyDALNAVSRSASQIGLTARETPRSVDIISARAIQQRG 96
Cdd:COG4773 5 LAGSGLAAAAAGALAQAAAAAAAEATT--LPEVTVTGTAEGTG-GYTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 97 DRSLAAAVEHATGLSGVASPTLS-NNFSARGFRPIAWLYNGVEMPGSTLQLGDPAHYDSIEVLRGPGSALNGLSAAGGSV 175
Cdd:COG4773 82 ATTLDDALRNVPGVTVSSYDGGGrDSFSIRGFSIDNYLRDGLPLGGFGGGQPDTANLERVEVLKGPAGLLYGAGSPGGLV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 176 NLISRRPTFNRQpFELDYGLGSYRSQRLHLGAGGALVDDV-MAYRLDVSGNDSGSNVQYERDRQKRVSGSLLFKLTDDAL 254
Cdd:COG4773 162 NLVTKRPTAEPQ-GEVSLSAGSWDTYRATADVGGPLNEDGtLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 255 LTLSLDRMLNRTNNPYYGTPLlNGRIAGELRDINYNNlTDSRIQSNATAFQASLDWFMTPEVEWHNQFYYYSGFREWRNV 334
Cdd:COG4773 241 LTLGAEYQDDDSTGDRGFLPL-DGTLLDLPRSTNLGE-PWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 335 ERFRVAAAAwPGDVNRdSFGALAHDDDLIGNRSSLVFDRAIAGFDNRLLVGFDLSKRHFQYYSNGFPgseDVPLGAPPRE 414
Cdd:COG4773 319 YAYGAPDAA-TGTLTR-YASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDSDSATAG---TINIYNPVYG 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 415 PFAqgTASQRAPVRHVTQNQYAAFLEDRFSLTERLALLGQLRYNHMNMDWRFQGPQEESRARTYVFsTWSLGPSYALTDN 494
Cdd:COG4773 394 NLP--EPDFDASDTDTTTRQTGLYAQDQISLTDRLSLLLGGRYDWYETDSTNRLGGSTTSYDDSAF-TPRAGLVYDLTPG 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 495 LTLYANYTTGQEPGNDLfflSPTQTDLPLTRARQWEAGAKGQFWDNKGEATLALYELRKDNLFVPDAQRPDALNAVGRQT 574
Cdd:COG4773 471 LSLYASYSESFEPQSGA---DNNGNPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATTDPDNPNFYVQVGEVR 547
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 575 SRGIELGVVLRPDDRWELAGNAAYTHARYDDYRGgsplrSYNGNRPAYIPDWTANLSVHYQ----ATARLGLASSLRYVG 650
Cdd:COG4773 548 SRGVELELSGELTPGLNLIAGYTYTDAKITKDAD-----ALEGKRLTNVPRHTASLWTTYRfpsgALKGLGLGGGVRYVG 622
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 651 SSYNDDANQRKMRAYTTLDLAADYQLTPIVDVGFRIRNATNQLYAYQRTYPDQALIAPPRSYETFVSVRF 720
Cdd:COG4773 623 ERYGDAANTFTLPSYTLVDAGARYDLGKNWTLQLNVNNLFDKKYYASSGSRGYVYYGAPRNVRLSLSYKF 692
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
63-696 |
8.99e-90 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 294.04 E-value: 8.99e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 63 LNAVSRSASQIGLTARETPRSVDIISARAIQQRGDRSLAAAVEHATGLSGVASPTLSNNFSARGF----RPIAWLYNGVE 138
Cdd:COG1629 1 LEEVVVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQISIRGFggggNRVLVLVDGVP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 139 MPGST-----LQLGDPAHYDSIEVLRGPGSALNGLSAAGGSVNLISRRPTFNRQpFELDYGLGSYRSQRLHLGAGGAlvD 213
Cdd:COG1629 81 LNDPSggdggLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKG-GEVSASYGSYGTYRASLSLSGG--N 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 214 DVMAYRLDVSGNDSGSNVQYERDRQKRVSGSLLFKLTDDALLTLSLDRMLNRTNNPYYGTPLLNGRIAGELRDINYNNLT 293
Cdd:COG1629 158 GKLAYRLSASYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLTLAALRPRGAMDDGTNPYSND 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 294 DSRIQSNATAFQASLDWFmTPEVEWHNQFYYYSGFREWRNverfrvaaAAWPGDVNRDSFGALAHDDDLIGNRSSLVFDR 373
Cdd:COG1629 238 TDDNTRDRYSLSLEYEHL-GDGLKLSASAYYRYDDTDLDS--------DFTPTPADGGTLEQTDFDNRTYGLELRLTYDL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 374 AIaGFDNRLLVGFDLSKRHFQyySNGFPgsedVPLGAPPREPFAQGTASqrapvrHVTQNQYAAFLEDRFSLTERLALLG 453
Cdd:COG1629 309 GF-GGKHTLLVGLDYQRQDLD--GSGYP----LDLGSGSLPTLTSGADD------DGTTTSLALYAQDTYKLTDKLTLTA 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 454 QLRYNHMNMD--WRFQGPQEESRARTYVFSTWSLGPSYALTDNLTLYANYTTGQEPG--NDLFFLSPTQT-----DLPLT 524
Cdd:COG1629 376 GLRYDYVSYDvdDTVTGTDSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPtfGELYANGTDPYsvgnpDLKPE 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 525 RARQWEAGAKGQFWDNKGEATLALYELRKDNLFVPDAQRPDA-----LNAVGRQTSRGIELGVVLRPDDRWELAGNAAYT 599
Cdd:COG1629 456 TSTNYELGLRYRLLDGRLSLSLALFYSDVDNEILSVPLPNDSgfstyYTNAGKARSYGVELELSYQLTPGLSLNASYSYT 535
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 600 HARYDDYRGGSPlrSYNGNRPAYIPDWTANLSVHYQATARLGLASSLRYVGSSYNDDAN-QRKMRAYTTLDLAADYQLTP 678
Cdd:COG1629 536 DAKFDDDTDGSA--DLDGNRLPGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRYLDDANtQGAPGGYTLVDLGAGYRFGD 613
|
650
....*....|....*...
gi 2310150666 679 IVDVGFRIRNATNQLYAY 696
Cdd:COG1629 614 NLTLSLGVDNLFDKKYAT 631
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
83-720 |
2.91e-72 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 246.98 E-value: 2.91e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 83 SVDIISARAIQQRGDRSLAAAVEHATGLSGVA-SPTLSNNFSARGFRP--IAWLYNGVEMPGST------LQLGDPAHYD 153
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRgGGGGGSTISIRGFGPdrTLVLVDGLPLASSNygrgvdLNTIPPELIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 154 SIEVLRGPGSALNGLSAAGGSVNLISRRPT-FNRQPFELDYG-LGSYRSQRLHLGAGGALV-DDVMAYRLDVSGNDSGS- 229
Cdd:cd01347 81 RVEVLKGPSSALYGSGAIGGVVNIITKRPTdEFGGSVTAGYGsDNSGSSGGGGFDVSGALAdDGAFGARLYGAYRDGDGt 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 230 -NVQYERDRQKR----VSGSLLFKLTDDALLTLSLDRmLNRTNNPYYGTPLLNGRIAGELRDINYNNLTDSRIQSNATAF 304
Cdd:cd01347 161 iDGDGQADDSDEerynVAGKLDWRPDDDTRLTLDAGY-QDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDRYR 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 305 QASLDWFMTPEVEWHNQFYYYSGFRE---WRNVERFRVAAAAWPGDVNRDSFGAlAHDDDLIGNRSSLVFDRAIAGFDNR 381
Cdd:cd01347 240 KRASLGLEHDLNDTGWTLRANLSYSYtdnDGDPLILNGGNNAAGGDLGRSGYSS-ERDTTQLGFDAGLNAPFGTGPVAHT 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 382 LLVGFDLSKRHFqyysngfpgsedvplgapprepfaqgtasqrapvrhvTQNQYAAFLEDRFSLTERLALLGQLRYNHMN 461
Cdd:cd01347 319 LTLGVEYRREEL-------------------------------------DEKQTALYAQDTIELTDDLTLTLGLRYDHYD 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 462 MDWRFQGPQEESRARTYVFSTWSLGPSYALTDNLTLYANYTTGQEPGN--DLFFLSPTQ-------TDLPLTRARQWEAG 532
Cdd:cd01347 362 QDSKDTIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSlgELYGGGSHGgtaavgnPNLKPEKSKQYELG 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 533 AKGQfWDNKGEATLALYELRKDNLFVPDAQRPDALN-----AVGRQTSRGIELGVVLRPDDRWELAGNAAYTHARYDDYR 607
Cdd:cd01347 442 LKYD-PGDGLTLSAALFRIDIKNEIVSTPTNTGLGLvtvyvNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRTD 520
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 608 GgsplrSYNGNRPAYIPDWTANLSVHYQATA-RLGLASSLRYVGSSYNDDA---NQRKMRAYTTLDLAADYQLTPIVDVG 683
Cdd:cd01347 521 G-----ATTGNRLPGIPKHTANLGLDYELPDeGLTAGGGVRYRGKQYADTAngnNTVKVPGYTLVDLSASYQFTKNLTLR 595
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 2310150666 684 FRIRNATNQLY---AYQRTYPDQALIAPPRSYETFVSVRF 720
Cdd:cd01347 596 LGVNNLFDKDYytsLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
53-720 |
3.12e-61 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 217.87 E-value: 3.12e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 53 AAAPAGRYDALNAVSRSASQIGLT-ARETPRSVDIISARAIQQRGDRSLAAAVEHATGLSGVAS--PTLSNNFSARGFRP 129
Cdd:COG4772 13 AAAAAEAATTLETVVVTGSRAAEArLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNVQEEdgFGLRPNIGIRGLGP 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 130 -----IAWLYNGVemPGSTLQLGDPAHY--------DSIEVLRGPGSALNGLSAAGGSVNLISRRPTfNRQPFELDYGLG 196
Cdd:COG4772 93 rrsrgITLLEDGI--PIAPAPYGDPAAYyfpdlermERIEVLRGAAALRYGPQTVGGAINFVTRTIP-TAFGGELRVTGG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 197 SYRSQRLHLGAGGalVDDVMAYRLDVSGNDSGSNVQYERDRQKRVSGSLLFKLTDDALLTLSLDRMLNRTNNPYYGTPll 276
Cdd:COG4772 170 SFGYRRTHASVGG--TVGNFGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKFQYYDEDANTPGGLTD-- 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 277 ngriAGELRDINYNNLTDSRIQSNATAFQASLDWFMTPEVEWHNQFYYYSGFREWRNveRFRVAAAAWPGDVNRDSFGal 356
Cdd:COG4772 246 ----AQFDADPRQSYRPADQFDTRRTQLSLRYEHQLSDNTTLTTTAYYNDFSRNWYI--RQNTADPNTPGLGLRGNPR-- 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 357 ahDDDLIGNRSSLVFDRAIAGFDNRLLVGFDLSK--RHFQYYSNGFPGSEDvplGAPPREPFAQGTasqrapvrhvtqNQ 434
Cdd:COG4772 318 --GYRSYGIEPRLTHRFELGGVPHTLEVGLRYHReeEDRKQYVNTYGQGRS---GAGLRRDRRFSA------------DA 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 435 YAAFLEDRFSLTERLALLGQLRYNHMNMDWR----FQGPQEESRARTYVFSTWSLGPSYALTDNLTLYANYTTGQEP--G 508
Cdd:COG4772 381 LAAYAQNRFELTGRLTLTPGLRYEHIRRDRTdrysTRTGGDDSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPptF 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 509 NDLFFLSPTQTDLPLTRARQWEAGAKGQfWDNKGEATLALYELRKDNLFVPDAQRPDALNA---VGRQTSRGIELGVVLR 585
Cdd:COG4772 461 GDLAYGNGGNPDLKPEKSWNYELGTRGR-IGNGLSAEVALFYIDYDNELGSCSAAGGDRSTftnAGETRHQGLELALDYD 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 586 P----DDRWELAGNAAYTHARYDDYRGGsplrSYNGNRPAYIPDWTANLSVHYQaTARLGLASSLRYVGSSYNDDANQRK 661
Cdd:COG4772 540 LlkggGLGLPLFAAYTYTDAEFTSDFGP----VFAGNRLPYVPRHQLTAGLGYE-HGGWTANLNGRYVSEQFTDAANTVA 614
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2310150666 662 MR------AYTTLDLAADYQLTPIVDVGFRIRNATNQLYAYQR--TYPDQALIAPPRSYETFVSVRF 720
Cdd:COG4772 615 DGsfgkipSYTVLDLSASYDFGKNLSLFAGVNNLFDKRYIASRapNYAAGIRPGPPRTVYAGLRLKF 681
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
62-682 |
1.10e-55 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 200.85 E-value: 1.10e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 62 ALNAVSRSASQIGLTARETPRSVDIISARAIQQRGDRSLAAAVEHATGLS--GVASPTLSNNFSARGFRP--IAWLYNGV 137
Cdd:COG4771 26 ELEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSvtRSGGRGGSSGISIRGLGGdrVLVLIDGV 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 138 EMPGSTLQLG------DPAHYDSIEVLRGPGSALNGLSAAGGSVNLISRRPTfNRQPFELDYGLGSYRSQRLHLGAGGAL 211
Cdd:COG4771 106 PVNNPALGGGgdlsyiPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPT-DELEGSVSLGYGSNGNGTYSGSLSLGG 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 212 VDDVMAYRLDVSGNDSGSNVQYERD--------RQKRVSGSLLFKLTDDALLTLSLDRMLNRTNNPYYGTPLLNGRIAGE 283
Cdd:COG4771 185 PGDKLSFLLSGSYRDRDGYLDYRNGgfvgnsgyERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNA 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 284 LRDINYNNLTDsriqsnatafqASLDWFMTPEVEWHNQFYYysgfrEWRNVERFRVAAAAWPGDVNrdsfgalAHDDDLI 363
Cdd:COG4771 265 GDRDTTTDRGN-----------YSLRYNGDLGDNLDLSLYY-----SRTDRDSTNGSLGGSTGSFS-------DSDDTTY 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 364 GNRSSLVFDraiAGFDNRLLVGFDLskRHFQYYSNGFPGSEDvplgapprepfaqgtasqrapvrhVTQNQYAAFLEDRF 443
Cdd:COG4771 322 GLELDLTYP---LGGNHTLTLGAEY--RYDDLDSSSFLGGAD------------------------ASRDTYGLFAQDEW 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 444 SLTERLALLGQLRYNHMNMDwrfqGPQEESRArtyvfsTWSLGPSYALTDNLTLYANYTTGQEPGN--DLFFLSPTQTDL 521
Cdd:COG4771 373 KLTDKLTLTAGLRYDYYSTF----GASNYTAF------SPRLGLRYDLSDNLTLRASYGRGFRAPSlaELYGSGTGTPGR 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 522 PLT--------RARQWEAGAKGQFWDNKGEATLALYELRKDNLFVPDAQRPDALNA-----VGRQTSRGIELGVVLRPDD 588
Cdd:COG4771 443 YVLgnpdlkpeTSDNYELGLEYRLGNGGLSLSLTGFYTDIKDLIVLVPVGPGPGDVlqyenVGKARTYGLELELKYRLGK 522
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 589 RWELAGNAAYTHARYDDYRGGSPLrsyngnrpAYIPDWTANLSVHYQATARLGLASSLRYVGSSY---NDDANQRKMRAY 665
Cdd:COG4771 523 GLTLTASYTYLDSKIDDGDTGEPL--------PNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYvtpPSGRLEGYTPGY 594
|
650
....*....|....*..
gi 2310150666 666 TTLDLAADYQLTPIVDV 682
Cdd:COG4771 595 TLLDLRASYKLTKNLTL 611
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
79-720 |
1.51e-53 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 195.71 E-value: 1.51e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 79 ETPRSVDIISARAIQQRGDRSLAAAVEHATGLSGVASPTLSN--NFSARGFrPIAWLYNGVEMPGSTLQLG------DPA 150
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQfgNITIRGF-GLEVDIDNVYLDGVPLLSRgnlaivDPA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 151 HYDSIEVLRGPGSALNGLSAAGGSVNLISRRPTFNrQPFELDYGLGSYRSQRLHLGAGGAL-VDDVMAYRLDVSGNDSGS 229
Cdd:TIGR01783 80 MVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDE-PKGSVTFGAGTRSGYRTAFDLGGPLgADGTFRGRLNGARQDGDS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 230 NVQYERDRQKRVSGSLLFKLTDDALLTLSLDRMLNRTNNPYYGTPLLNG---------RIAGELRDINYNNLTDSRIqSN 300
Cdd:TIGR01783 159 FYDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGtsgrdlssdRYLGTSSNRNYDDREYLSY-GL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 301 ATAFQASLDWFMTpevewHNQFYYYSGFReWRNVERFRVAAAawpGDVNRDSFGALAHDDDLIGNRSSLVFDRAIAGFDN 380
Cdd:TIGR01783 238 SLEYQFNDVWTGK-----QNLRYSYFDTD-SNQVQASGYSSD---GGLFGRSLTVVNVKQDRVQIDAGLDGEFETGPIEH 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 381 RLLVGFDLSKRHFQYYSNGfpGSEDVPLGAPPREPFAQGTASQRAPVRHVTQNQYA--AFLEDRFSLTERLALLGQLRYN 458
Cdd:TIGR01783 309 DLLLGVSYGQRTTNRFNNT--GYPSDNIYSLTATSSARTDIGDSPKDRALSSTTKAlnGVALQRILLADKWTLTLGGRYD 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 459 HMNMDwRFQGPQEESRARTYVFSTWSLGPSYALTDNLTLYANYTTGQEPGNDLFFLSPTQTD-LPLTRARQWEAGAKGQf 537
Cdd:TIGR01783 387 SVDVK-SNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNSGDiLEPEKGKNYELGVRYD- 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 538 WDNKGEATLALYELRKDNLFVPDAQRPDALNAVGRQTSRGIELGVVLRPDDRWELAGNAAYTHARY-DDYRGGsplrsYN 616
Cdd:TIGR01783 465 LGDSLLATAALFRITKDNQLVQDPVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFtEDTNGD-----TQ 539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 617 GNRPAYIPDWTANLSVHYQA---TARLGLASSLRYVGSSYNDDANQRKMRAYTTLDLAADYQLTPIVD--VGFRIRNATN 691
Cdd:TIGR01783 540 GNTVPFVPKHTASLWASYAPpvgDNGLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLTKKKNltLALNVNNLFD 619
|
650 660 670
....*....|....*....|....*....|..
gi 2310150666 692 QLY--AYQRTYPDQALI-APPRSYETFVSVRF 720
Cdd:TIGR01783 620 RDYytSGYRWGPSAYIYpGAPRTVGLSVSYDF 651
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
266-720 |
7.94e-42 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 158.78 E-value: 7.94e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 266 TNNPYYGTPLLNGRIAGELRDINYNNLTDSRIQSNATAFQASLDWFMTPEVEWHNQFYYYSGFREWRNVERFRVAAAAwp 345
Cdd:pfam00593 25 TDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRYSSLDGDYTSNSSGLS-- 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 346 gdvnrdSFGALAHDDDLIGNRSSLVFDRAIAGFDNRLLVGFDLSKRHFQYYSNGFPGSedvplgapprePFAQGTASQRA 425
Cdd:pfam00593 103 ------GAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAY-----------DPYDPANPSSS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 426 PVRHVTQNQYAAFLEDRFSLTERLALLGQLRYNHMNMDWRFQGPQEESRARTYVFSTWSLGPSYALTDNLTLYANYTTGQ 505
Cdd:pfam00593 166 SYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGGGDNFSRSYSAFSPRLGLVYKPTDNLSLYASYSRGF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 506 E--PGNDLFFLSPTQT---------DLPLTRARQWEAGAKgqFWDNKGEATLALYELRKDNLFVPDAQRPDALNA----- 569
Cdd:pfam00593 246 RapSLGELYGSGSGGGggavaggnpDLKPETSDNYELGLK--YDDGRLSLSLALFYIDIKNLITSDPDGPGLGGTvytyt 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 570 -VGRQTSRGIELGVVLRPDDRWELAGNAAYTHARYDDYrggsplRSYNGNRPAYIPDWTANLSVHYQ-ATARLGLASSLR 647
Cdd:pfam00593 324 nVGKARIRGVELELSGRLWGLGLSGGGYTYTDADDDAD------ADDTGNPLPNVPRHTANLGLTYDfPLGGWGARLGAR 397
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2310150666 648 YVGSS---YNDDANQRKMRAYTTLDLAADYQLTPIVDVGFRIRNATNQLYAYQRTYPDQAL---IAPPRSYetFVSVRF 720
Cdd:pfam00593 398 YVGSGerrYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRYYSSGGGNLggyPGPGRTF--YLGLSY 474
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
3-676 |
1.29e-32 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 134.50 E-value: 1.29e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 3 TTRRRLGTPKKSLCLAAAWIGGALT--APLAFAADCDKarnatgcEEQLTVEAAaPAGRYDALNAVSRSASQIGLTA--- 77
Cdd:PRK10044 1 MARSKTAQPNHSLRKIAVVVATAVSgmSVYAQAAVEPK-------EETITVTAA-PAPQESAWGPAATIAAKRSATGtkt 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 78 ----RETPRSVDIISARAIQQRGDRSLAAAVEHATGLSgVASPTLSNNFSA---RGFRPIA-----WLyNGVEMPG---S 142
Cdd:PRK10044 73 dtpiEKTPQSISVVTAEEMALHQPKSVKEALSYTPGVS-VGTRGASNTYDHliiRGFAASGqsqnnYL-DGLKLQGnfyN 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 143 TLQLgDPAHYDSIEVLRGPGSALNGLSAAGGSVNLISRRPTfnRQPF-ELDYGLGSYRSQRLHLGAGGALVDD-VMAYRL 220
Cdd:PRK10044 151 DAVI-DPYMLERAELMRGPVSVLYGKSNPGGLLNMVSKRPT--TEPLkEVQFKMGTDNLFQTGFDFSDALDDDgVYSYRL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 221 dvSGNDSGSNVQYERDRQKR--VSGSLLFKLTDDALLTLsLDRMLNRTNNPYYG--------TPLLNG-RIAGELRDINY 289
Cdd:PRK10044 228 --TGLARSANAQQKGSEEQRyaIAPSFTWRPDDKTNFTF-LSYFQNEPETGYYGwlpkegtvEPLPNGkRLPTDFNEGAK 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 290 NNLTDSRIQSNATAFQASLDWFMTPEvewhnQFYYYSGFR-EWRNVERFRVAAAaWPGDVNRdsfgALAHDDDLIGNRS- 367
Cdd:PRK10044 305 NNTYSRNEKMVGYSFDHEFNDTFTVR-----QNLRYAENKtSQRSVYGYGVCSD-KGHYLNR----GYVVDDEKLQNFSv 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 368 --SLVFDRAIAGFDNRLLVGFDLSK-RHFQYYSNGFPGSED-VPLGAPPREPFAQGTASQraPVRHVT-QNQYAAFLEDR 442
Cdd:PRK10044 375 dtQLQSKFATGDVDHTLLTGVDFMRmRNDINAWFGYADSVPlLNLYGPVNTDFDFNANSG--PYQILNkQKQTGLYVQDQ 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 443 FSLTERLALLGQlRYNHMNMDWRFQGPQEESRARTYVFsTWSLGPSYALTDNLTLYANYTTGQEPGndlfflspTQTDLP 522
Cdd:PRK10044 453 AEWDKWLVTLGG-RYDWADQSSLNRVNGTTDKRDDKQF-TWRGGVNYLFDNGITPYFSYSESFEPS--------SGTGKD 522
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 523 -----LTRARQWEAGAKGQFWDNKGEATLALYELRKDNLFVPDAQRPDALNAVGRQTSRGIELGVVLRPDDRWELAGNAA 597
Cdd:PRK10044 523 gnifaPSKGKQYEAGVKYVPKDRPIVVTGAVYQLTKTNNLTADPENSFFSVQGGEIRARGVELEAKAALSANVNVTGSYT 602
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 598 YTHARYddyrggSPLRSYNGNRPAYIPDWTANL----SVHYQATARLGLASSLRYVGSSYNDDANQRKMRAYTTLDLAAD 673
Cdd:PRK10044 603 YTDAEY------TTDTTYKGNTPAQVPKHMASLwadyTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVK 676
|
...
gi 2310150666 674 YQL 676
Cdd:PRK10044 677 YDL 679
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
1-720 |
1.28e-30 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 128.45 E-value: 1.28e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 1 MSTTRRRLGTPKKSL--CLAAAWIGGALTAPLAFAAdcdkarnaTGCEEQLTVEAAAPAGRYDALNAVSRSASQIG---- 74
Cdd:PRK10003 1 LSTQFNRDNQYQAIAkpSLLAGCIALALLPSAAFAA--------PATEDTVIVEGSATAPVDDGEQDYSVKTTSAGtkmq 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 75 LTARETPRSVDIISARAIQQRGDRSLAAAVEHATGLSGVASPTLSNNFSARGFRPIAWLYNGveMP---------GSTlq 145
Cdd:PRK10003 73 MTQRDIPQSVSIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGFQIDNYMVDG--IPtyfesrwnlGDA-- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 146 LGDPAHYDSIEVLRGPGSALNGLSAAGGSVNLISRRPTFNRQPFELDYGLGSYRSQRLHLGAGGALVDDVMAYRLDVSG- 224
Cdd:PRK10003 149 LSDTALFERVEVVRGATGLMTGTGNPSAAINMVRKHATSREFKGDVSAEYGSWNKQRYVADLQSPLTEDGKVRARIVAGy 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 225 NDSGSNVQYERDRQKRVSGSLLFKLTDDALLTLSLDRMLNRTNNPYY-GTPLLN--------GRIAGELRDINYNNLTDS 295
Cdd:PRK10003 229 QNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWgGLPRWNtdgssnsyDRARSTAPDWAYNDKEIN 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 296 RI-----QSNATAFQASLDwFMTPEVEWHNQFYYYSGFREWRNverfrvAAAAWPGDVNRDSFGALAHDDDLIGNRSSLV 370
Cdd:PRK10003 309 KVfmtlkQRFADTWQATLN-ATHSEVEFDSKMMYVDAYVDKAT------GMLVGPYSNYGPGFDYVGGTGWNSGKRKVDA 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 371 FDR------AIAGFDNRLLVGFDLSKRHFQYYS---NGFPgsEDVPLGAPPREPFAQGTASQRAPVRHVTQNQYAAFLED 441
Cdd:PRK10003 382 LDLfadgsyELFGRQHNLMFGGSYSKQNNRYFSswaNIFP--DEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAAT 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 442 RFSLTERLALLGQLRYNHMNMDWRFQGPqEESRARTYVfstwslGPSYALTDNLTLYANYTTGQEPGNDL----FFLSPT 517
Cdd:PRK10003 460 RVSLADPLHLILGARYTNWRVDTLTYSM-EKNHTTPYA------GLVYDINDNWSTYASYTSIFQPQNDRdssgKYLAPI 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 518 QtdlpltrARQWEAGAKGQFWDNKGEATLALYELRKDNL------FVPDAQRPDALNAVGRQTSRGIELGVVLRPDDRWE 591
Cdd:PRK10003 533 T-------GNNYELGLKSDWMNSRLTTTLAIFRIEQDNVaqstgtPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQ 605
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 592 LAGNAaythARY--DDYRGgsplrsyNGNRPaYIPDWTANLSVHYQ--ATARLGLASSLRYVGSSYNDDANQRKM-RA-- 664
Cdd:PRK10003 606 LTFGA----TRYiaEDNEG-------NAVNP-NLPRTTVKLFTRYRlpVMPELTVGGGVNWQNRVYTDTVTPYGTfRAeq 673
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 2310150666 665 --YTTLDLAADYQLTPIVDVGFRIRNATNQLYAyqrTYPDQALI-APPRSYETFVSVRF 720
Cdd:PRK10003 674 gsYALVDLFTRYQVTKNFSVQGNVNNLFDKTYD---TNVEGSIVyGAPRNFSITATYQF 729
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
23-675 |
5.63e-24 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 107.58 E-value: 5.63e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 23 GGALTAPLAFAADCDKARNATGCEEQLTVE--------AAAPAGRYDALNAVSRSASQIGLTarETPRSVDIISARAIQQ 94
Cdd:PRK14050 16 AGVALAALVLSGLVAAQEGNTTQLETIVVEggnaasatATGPVDGYVAKATATGSKTDTPIT--EIPQSVSVVGRQEMDD 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 95 RGDRSLAAAVEHATglSGVASPTLSNN-----FSARGFRPIAwlyNGVEMPGSTL--------QLgDPAHYDSIEVLRGP 161
Cdd:PRK14050 94 RGVTNKVDEALRYT--PGVLSQPFGTDgdtdwFYIRGFDATQ---TGVFLDGLNLfsygfggfQI-DPFMLERVEVLKGP 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 162 GSALNGLSAAGGSVNLISRRPTfNRQPFELDYGLGSYRSQRLHLGAGGALVDD-VMAYRLD--VSGNDSGSNvqYERDRQ 238
Cdd:PRK14050 168 ASVLYGGSNPGGIVNMVSKRPL-DEPLYYTEIGINSYGNAFTGFDVGDKLSDDgTVRYRVTgkVAGGDNYSD--YSEDLR 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 239 KRVSGSLLFKLTDDALLTL-----SLDRmLNRTNN--PYYGT--PLLNGRIAgelRDINY-----NNLTdSRIQSNATAF 304
Cdd:PRK14050 245 GFIMPQITYAPDDATSLTVygylsGLDQ-VHVGNGflPYVGTvvDAPFGKID---RDAFYgepdiDNGS-YAQQMLGYEF 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 305 QASLD--WFMTPEVEW-----HNQFYYYSGfreWRNVERFRVAAAAWPGDVNRDSFGALAHDDD-LIGNRSSLVFDraIA 376
Cdd:PRK14050 320 SHEFDngWTFSQNARYghlhkHEKGPYTYG---YVGGATGLPDPTGPDYMLNRIGFEHRSKVDSfSIDNRLEGEFD--TG 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 377 GFDNRLLVGFDLskRHFQYYSNGFPGSEDVPLGAPPREPFAQGTASQRAPvRHVTQNQYAAFLEDRFSLTERLALLGQLR 456
Cdd:PRK14050 395 ALTHNLLFGLDY--KYYRLDQVQACCGATPISATNPVYGTTQGANFVYLD-QILTQQQIGIYAQDQIRFGDGWLVTLNGR 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 457 YNHMNMDwrfqgpQEESRARTYVFSTWSL----GPSYALTDNLTLYANYTTgqepgndlfFLSP----TQTDLPLT--RA 526
Cdd:PRK14050 472 YDYVDTD------SDARIGTSYESNDGALsgraGLAYEFDNGLTPYVSAAT---------FFNPlvgtLASGPPLKpeEG 536
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 527 RQWEAGAKGQ--FWDnkGEATLALYELRKDNLFVPD----AQRpdalnAVGRQTSRGIELGVVLRPDDRWELAGNAAYTH 600
Cdd:PRK14050 537 EQYEAGIKYEpsFID--GLITASVFQITKKNVTVTDpltfAST-----QLGEVRSRGFELEGKVNLDDNWKALASFTYTD 609
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2310150666 601 ARYDDYRGGSPLrsynGNRPAYIPDWTANLSVHYQATAR----LGLASSLRYVGSSYNDDANQRKMRAYTTLDLAADYQ 675
Cdd:PRK14050 610 LEITEDANPSLI----GNSPYLVPETQASLWLDYAVTDGafegVSLGAGVRYQGESWADEANTLKVPAATLFDAAIRYE 684
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
67-679 |
5.78e-22 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 101.13 E-value: 5.78e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 67 SRSASQIGLTARETPRSVDIISARAIQQRGDRSLAAAVEHATG--LSGVASPTLSNNFSARGFRPIawlYNGV-----EM 139
Cdd:PRK14049 66 SATGAKVDTPFLETPQSISSVTEQQLKDRNPQTLLETLAYTPGarVGAFGFDPRFDAFFVRGFDVT---YTGVfrdnlRQ 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 140 PG--STLQLGDPAHYDSIEVLRGPGSALNGLSAAGGSVNLISRRPTFNR-QPFELDYGlGSYRSQRLHLGAGGALVDDVM 216
Cdd:PRK14049 143 PGasSSIFKTEPYGLEGVSILRGPSSALYGASGAGGLFNLITKRPTEEPlREVQVQYG-TNNRYQGQFDFSGPVNETDPV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 217 AYRLDVSGNDSGSNVQYERDRQKRVSGSLLFKLTDDALLTL--SLDRMLNRTNNPYYGTPLlngriAGELRDINYNNltd 294
Cdd:PRK14049 222 YYRLTGLLRDADTEQVGVPDDRAYIAPAFTWKPDEDTRLTVlgEYSRTKTGGTAAYYNDPL-----TGEVTDIFAGN--- 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 295 sriqsnaTAFQASLDWFMTPEVEWHNQFYYYSGFREWRNVERFRV----AAAAWPGDVNRDSFGALA--HDDDL----IG 364
Cdd:PRK14049 294 -------PAFNDSVQKQGRIGYEFEHRLNDTFVFRQNARVSTLNIdadwAFAYAPNAADPTLLDSSAgtYDERLtafvID 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 365 NRSSLVFDraIAGFDNRLLVGFDLSKRHFQYYSN-GFPGSEDV--PLGAPPREPFAQGTASQRapvrhvTQNQYAAFLED 441
Cdd:PRK14049 367 NQLEAKFD--TGAFEHTLLAGVDYTKLRFRALNGrGVSPPLDTknPTQGRPVAAIDFSTRTVQ------DQWQLGTYLQD 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 442 RFSLtERLALLGQLRYNHMNMDWR----FQGPQEESRARTYVFStWSLGPSYALTDNLTLYANYTTGQEPgnDLFFLSPT 517
Cdd:PRK14049 439 QIRY-DAWTLTAGGRYDWVSTDTDttdlATDSLTTVSQKDKEFS-GRIGLTYETDFGLAPYISYSTAFSP--NAGFNRAT 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 518 QTDLPLTRARQWEAGAKGQFWDNKGEATLALYELRKDNLFVPDAQRPDALNAV-----GRQTSRGIELGVVLRPDDRWEL 592
Cdd:PRK14049 515 NQPFKPTESEQQEVGVKYLLPNSNTLITAALFNIDQTNGLYYEVVFLAAGPTNiqvqrGKLRSRGFELEANTSLDNGLSL 594
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 593 AGNAAYTHARYDDYRGGSplrsyNGNRPAYIPDWTANLSVHYQ-----ATARLGLASSLRYVGSSYNDDANQRKMRAYTT 667
Cdd:PRK14049 595 IASYTYTDVKIIQGPEGT-----IGNEVSSVPNHMASAWAHYTlpeggPLYGLGLGAGARFVGSSYGNDQNTFKNSSRVL 669
|
650
....*....|..
gi 2310150666 668 LDLAADYQLTPI 679
Cdd:PRK14049 670 FDASVGYDFAAI 681
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
69-326 |
6.54e-22 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 96.09 E-value: 6.54e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 69 SASQIGLTARETPRSVDIISARAIQQRGDRSLAAAVEHATGLSGVAS--PTLSNNFSARGFRP--IAWLYNGVEMPGSTL 144
Cdd:COG4206 4 TATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSggPGSAASISIRGLGSnqTLVLIDGVPLNDPSL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 145 QLGDPAHY-----DSIEVLRGPGSALNGLSAAGGSVNLISRRPTFNRQPfELDYGLGSYRSQRLHLGAGGALVDD---VM 216
Cdd:COG4206 84 GGVDLSLIppddiERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKG-SVSASYGSFGTRRLSASLSGGAGKFsysLS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 217 AYRLDVSGNDSGSNVQYERD--RQKRVSGSLLFKLTDDALLTLSLDRMLNRTNNPYYGTPLLNGRIagelrDINYNNLTD 294
Cdd:COG4206 163 ASYRRSDGYRYNDPDLRNNDgyENTSLNARLGYKLGDNGSLSLSGGYSDSERGYPGAVGSDRNLRL-----SLSLEYKLS 237
|
250 260 270
....*....|....*....|....*....|..
gi 2310150666 295 SRIQSNATAFQASLDWFMTPEVEWHNQFYYYS 326
Cdd:COG4206 238 DGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDG 269
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
69-692 |
4.75e-20 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 95.07 E-value: 4.75e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 69 SASQIGLTARETPRSVDIISARAIQQRGDRSLAAAVEHATGLSgVASPTLSNNFSARGfrpiawlyngveMPGS-TLQLG 147
Cdd:PRK13484 36 TASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGIS-ITGGNEKPDISIRG------------LSGDyTLILV 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 148 D-----------------------PAH-YDSIEVLRGPGSALNGLSAAGGSVNLISRrpTFNRQPFELDYGLGSYRSQRL 203
Cdd:PRK13484 103 DgrrqsgresrpngsggfeagfipPVEaIERIEVIRGPMSSLYGSDAIGGVINIITK--PVNNQTWDGVLGLGGIIQEHG 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 204 HLG--------AGGALVDDVMAYRLDVSGN----DSGSNVQYERDrQKRVSGSLLFKLTDDALLTLSLDR-MLNRTNNPy 270
Cdd:PRK13484 181 KFGnsttndfyLSGPLIKDKLGLQLYGGMNyrkeDSISQGTPAKD-NKNITATLQFTPTESQKFVFEYGKnNQVHTLTP- 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 271 yGTPLLNGRIAGELRDINYNNLTDSRIQSNATAFQASLDwFMTPEVewhnQFYYYSGFREWRNverfrvaaaawpGDVNR 350
Cdd:PRK13484 259 -GESLDAWTMRGNLKQPNSKRETHNSRSHWVAAWNAQGE-ILHPEI----AVYQEKVIREVKS------------GKKDK 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 351 DSFGALAHDDDL--IGNRsslVFDRAIAGF--DNRLLVGfdlskRHFQYysngfpgsedvplgAPPREPFAQGTASQRAp 426
Cdd:PRK13484 321 YNHWDLNYESRKpeITNT---IIDAKVTAFlpENVLTIG-----GQFQH--------------AELRDDSATGKKTTET- 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 427 vRHVTQNQYAAFLEDRFSLTERLALLGQLRYNHMNMDWRFQGPqeesraRTYVFstwslgpsYALTDNLTLYA------- 499
Cdd:PRK13484 378 -QSVSIKQKAVFIENEYAATDSLALTGGLRLDNHEIYGSYWNP------RLYAV--------YNLTDNLTLKGgiakafr 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 500 ---------NYTTGQEPGNDLFFlspTQTDL-PLTRARQweagAKGQFWDN----KGEATLALYELrKDNLFVPDAQRPD 565
Cdd:PRK13484 443 apsirevspGFGTLTQGGASIMY---GNRDLkPETSVTE----EIGIIYSNdsgfSASATLFNTDF-KNKLTSYDIGTKD 514
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 566 ALNA--------VGRQTSRGIELGVVLRPDDRWELAGNAAYTHARY---DDYRGGSPLRSYNGNRpayIPDWTANLSVHY 634
Cdd:PRK13484 515 PVTGlntfiydnVGEANIRGVELATQIPVYDKWHVSANYTFTDSRRksdDESLNGKSLKGEPLER---TPRHAANAKLEW 591
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2310150666 635 QATARLGLASSLRYVG-----SSYNDDANQRKMRAYTTLDLAADYQLTPIVDVGFRIRNATNQ 692
Cdd:PRK13484 592 DYTQDITFYSSLNYTGkqiwaAQRNGAKVPRVRNGFTSMDIGLNYQILPDTLINFAVLNVTDR 654
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
11-694 |
2.24e-19 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 92.95 E-value: 2.24e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 11 PKKSLCLAAAWIGGALTAPLAFAADCDKArnATGCEEQLTVEAAAPAgRYDALNAVSRSASQIGLtarETPRSVDIISAR 90
Cdd:PRK09840 8 PARQFHSLAFFAGLCIGITPVAQALAAEG--QTNADDTLVVEASTPS-LYAPDQSADPKFSQPLA---DTTQTITVISEQ 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 91 AIQQRGDRSLAAAVEHATGLSGV-----ASPTLSNNFSARGFRPIAWLY-NGVEMPGSTLQlgDPAHYDSIEVLRGPGSA 164
Cdd:PRK09840 82 VIKDQGATNLTEALRNVPGVGTFfagenGNTTTGDAIYMRGFDTSNSIYvDGIRDIGSISR--DTFNTEQVEVIKGPSGT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 165 LNGLSAAGGSVNLISRRPTfNRQPFELDYGLGSYRSQRLHLGAGGALvDDVMAYRLDVSGNDSG----SNVQYERdrqKR 240
Cdd:PRK09840 160 DYGRSAPTGSINMISKQPR-NDSGIDASASIGSAWFRRGTLDVNQVI-GDTTAVRLNVMGEKTHdagrDKVKNER---YG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 241 VSGSLLFKLTDDALLTLSLdRMLNRTNNPYYGTPL--LNGRIAGELRDINYNNltDSRIQSN-----ATAFQASLDWFMT 313
Cdd:PRK09840 235 VAPSVAFGLGTANRLYLNY-LHVTQNNTPDGGIPTigLPGYSAPSAGRAALNH--AGKVDTHnfygtDSDYDDSTTDTAT 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 314 PEVEwHNqfyyYSGFREWRNVER------------FRVAAAAW----PGDVNRDSFGALAHDDD----LIGNRSSLVFDR 373
Cdd:PRK09840 312 MRFE-HD----INDNTTLRNTTRwsrvkqdylltaIMGGASNIttptPSDVNTWTWSRTANTKDvsnkILTNQTNLTSTF 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 374 AIAGFDNRLLVGFDLSKRHFQYYSNG----------FPGSEDVPLGAPPREPFAQGTAsqrapvrhvtqNQYAAFLEDRF 443
Cdd:PRK09840 387 YTGSIGHDVSTGVEFTRETQTNYGVNpvtlpavnlyHPDSSIHPGGLTRNGANANGQT-----------DTFAIYAFDTL 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 444 SLTERLALLGQLRYNHMNMDWR-FQGPQEESRARTYVFS--------------------TWSLGPSYALTDNLTLYANYT 502
Cdd:PRK09840 456 QLTRDWELNGGIRLDNYHTEYDsATACGGSGRGAITCPAgvakgspvttvdtaksgnlvNWKAGALYKLTENGNVYINYA 535
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 503 TGQE-PGNDLFFL-------SPTQTDLPLTRARQWEAGAKGQFWDNKGEATLALYELRKDNLFVPDAQrpDALNAVGRQT 574
Cdd:PRK09840 536 VSQQpPGGSNFALaqsgsgnSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDD--GTYSQYGKKR 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 575 SRGIELGVVLRPDDRWELagNAAYTHARyDDYRGGSPLRSYNGNRPAYIPDWTANLSVHYQATARLGLASSLRYVGSSYN 654
Cdd:PRK09840 614 VEGYELSVAGNITPAWQV--IAGYTQQK-ATVKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDLSVGGGARYIGSMHR 690
|
730 740 750 760
....*....|....*....|....*....|....*....|....
gi 2310150666 655 DD----ANQRKMRAYTTLDLAADYQLTPIVDVGFRIRNATNQLY 694
Cdd:PRK09840 691 GSdgavGTPAFTEGYWVADAKLGYRVNRNLDLQLNVYNLFDTDY 734
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
76-173 |
8.99e-17 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 76.54 E-value: 8.99e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 76 TARETPRSVDIISARAIQQRGDRSLAAAVEHATGLSGVASP-TLSNNFSARGFRP--IAWLYNGVEMPGST-----LQLG 147
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGgGGGSSISIRGFGSnrVLVLVDGVPLNSGGggsvdLNSI 80
|
90 100
....*....|....*....|....*.
gi 2310150666 148 DPAHYDSIEVLRGPGSALNGLSAAGG 173
Cdd:pfam07715 81 DPEDIERVEVLKGPASALYGSGAIGG 106
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
153-720 |
1.78e-08 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 57.73 E-value: 1.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 153 DSIEVLRGPGSALNGLSAAGGSVNLISRRPT---------FNRQPFELDYGLgsyrSQRLHLGAGGALVDDVmAYRL--- 220
Cdd:PRK13524 147 ERIEVLRGPAAARYGNGAAGGVVNIITKKPTgewhgswntYFNAPEHKAEGA----TKRTNFSLSGPLGDEL-SFRLygn 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 221 --DVSGNDSGSNVQYERDRQKRVSGSL--------------LFKLTDDALLTLSLDRMLNRTNNPYygtpllngriAGEL 284
Cdd:PRK13524 222 lnKTQADAWDINQGHQSARTGSYAGTLpagregvinkdingLLRWDFAPLQSLELEAGYSRQGNLY----------AGDT 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 285 RDINYNNLTDS-------RIQSNATAFQASLDWfmtpevEW---HNQFYYYSGFREWRNVERFrvaAAAWPG--DVNRDS 352
Cdd:PRK13524 292 QNTNSDALVKSlygketnRMYRQNYALTHRGGW------DNgvsTSNYAQYEHTRNSRLPEGL---AGGTEGifNEKATQ 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 353 FGALAHDDDLIGNRSSLVFDraiAGFDNRLLVGFDLSKRHFQ-YYSN--GFPGSEDVPlgapprePFAQGTASQRAPVRh 429
Cdd:PRK13524 363 FSTIDLDDVMLHSEVNLPFD---LLVNQTLTLGTEWNQQRMKdPSSNtqALTSGGAIP-------GVSATGRSPYSKAE- 431
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 430 vtqnQYAAFLEDRFSLTERLALLGQLRYNHmnmdwrfqgpqeesraRTYVFSTWS--LGPSYALTDNLTL---------- 497
Cdd:PRK13524 432 ----IFSLFAEDNMELTDSTMLTPGLRFDH----------------HSIVGNNWSpsLNLSQGLGDDFTLkmgiarayka 491
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 498 ---------YANYTTGQE-----------PGNDLffLSPTQT---DLPLTRARQ-WEAGAKgqfW-----DNKGEATLAl 548
Cdd:PRK13524 492 pnlyqtnpnYILYSKGQGcyasagngcylQGNDD--LKAETSvnkEIGLEFKRDgWLAGLT---WfrndyRNKIEAGYV- 565
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 549 yelrkdnlfvPDAQRPDALNA------VGRQTSRGIE--LGVVLRPDDRWelAGNAAYTharyddyrggspLRSYN---G 617
Cdd:PRK13524 566 ----------PVGTNSVGKTDiyqwenVPKAVVEGLEgtLNVPVSETVNW--TNNLTYM------------LQSKNkttG 621
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 618 NRPAYIPDWTANLSVHYQATARLGLASSLRYVG----SSYN------DDANQRKMRAYTTLDLAADYQLTPIVDVG---- 683
Cdd:PRK13524 622 DPLSIIPEYTLNSTLSWQATEDLSLQSTFTWYGkqkpKKYNykgqpvTGSATKEVSPYSIVGLSATYDVTKNVSLTggvd 701
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 2310150666 684 -------FRIRNATNQ----LYAYQRTYPDqaliaPPRSYetFVSVRF 720
Cdd:PRK13524 702 nlfdkrlWREGNAQTTgdliAGAGAYTYNE-----PGRTY--YMSLNT 742
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
420-720 |
8.72e-08 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 55.55 E-value: 8.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 420 TASQRAPVRHVTQNQYAAFLEDRFSLTERLALLGQLRYNHmnmDWRFqGPQEESRartyVFSTWSLgpsyalTDNLTLYA 499
Cdd:PRK13483 357 TSNQISDLTDISRTQWAVFSEDEWRIADDFALTGGLRLDH---DENF-GGHVSPR----VYGVWNL------APSWTVKG 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 500 NYTTGqepgndlfFLSPT--QT-----------------DLPLTRARQWEAGAKGQfWDNKGEATLALYelrkDNLF--- 557
Cdd:PRK13483 423 GVSTG--------FRAPSlrQTtpdwgqvsrggniygnpDLKPETSLNKELGLYYD-LGSGLTASLTVF----YNEFkdk 489
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 558 -----VPDAQRPDALNAVG----------RQTSRGIELGVVLRPDDRWELAGNAAYTHA--RYDDYRGgSPLRSyngnrp 620
Cdd:PRK13483 490 itrvaCPATQCTDGPNQFGadpttyvnidEAVTQGVEASLSYPITSTLSLSGNYTYTDSeqKSGAYKG-SPLNQ------ 562
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 621 ayIPDWTANLSVHYQATARLGLASSLRYVG--SSYNDDANQRKMRA--YTTLDLAADYQLTPIVDVGFRIRNATNQlyay 696
Cdd:PRK13483 563 --LPKHLFQASLNWEPTDRLNSWARVNYRGeeSQPTTGPSSSSFIApsYTFLDLGANYQLTDNLKLSAGIYNLFDK---- 636
|
330 340
....*....|....*....|....
gi 2310150666 697 QRTYPDQALIAPPRSYETFVSVRF 720
Cdd:PRK13483 637 EINYEEYGYVEDGRRYWLGMTYSF 660
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
155-499 |
1.26e-07 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 55.15 E-value: 1.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 155 IEVLRGPGSALNGLSAAGGSVNLISRRPT---------FNRQPFELDYGLgsyrSQRLHLGAGGALVDDVMAYRL----- 220
Cdd:PRK13528 147 IEVIRGPAAARYGSGAAGGVVNIITKRPTndwhgslslYTNQPESSKEGA----TRRANFSLSGPLAGDALTMRLygnln 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 221 -------DVSGNDSGSNVQ-YERDRQKRVSGSLLFKLTDDAllTLSLDRMLNRTNNPYygtpllngriAGELRDINYNNL 292
Cdd:PRK13528 223 ktdadswDINSSAGTKNAAgREGVRNKDINGVLSWKMTPQQ--ILDFEAGYSRQGNIY----------AGDTQNSNSSAV 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 293 TDSRI-----------QSNATAFQASLDWFMTPEVewhnqFYYysgfrEWRNVERFRVAAAAWPGdvnrdsfGALAHDDD 361
Cdd:PRK13528 291 TESLAksgketnrlyrQNYGLTHNGIWDWGQSRLG-----FYY-----EKTNNTRMNEGLAGGGE-------GRITADQT 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 362 LIGNR------SSLVFDRAIAGFDNRLLVGF--------DLSKRHFQYYSNGFPGSedvplgapprepfaQGTASQRAPV 427
Cdd:PRK13528 354 FTTSRlesyrtSGELNVPLNWLFEQTLTVGAewnrdelnDPSSTSLTVKDGDIGGI--------------SGSAADRSSK 419
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2310150666 428 RHvtQNQYAAFLEDRFSLTERLALLGQLRYNHMNmdwRFQGpqeesrartyvfsTW--SLGPSYALTDNLTLYA 499
Cdd:PRK13528 420 NK--SEISALYVEDNIEPVPGTNLIPGLRFDYHS---EFGS-------------NWspSLNLSQELGDYFKVKA 475
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
286-712 |
2.31e-07 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 54.26 E-value: 2.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 286 DINYNNLTDSRIQSNATAFQASLdwfmtpeveWHNQFYYYSGFREWR-----NVERFRVAAAAWPGDVNRDSFGALAHDD 360
Cdd:TIGR01782 354 DFDYRGGPTLTLGTPADGDDASN---------YTNPANGELRRTQISyqkaeDSEDAAQLDATFDGPFTSLKFGVRYRRR 424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 361 DlignRSSLVFDRAIAGFDNRLLVGF-----DLSKRHFQYYSNGF-----PGSEDVPLGAPPREP---FAQGTASQRAPV 427
Cdd:TIGR01782 425 D----KTNRGSRYRRSIIGATGASGLagvpsDLAGAGLDGGLGGPltgwdPADLDAFLNAARGDAaggGTYTYASTAPNT 500
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 428 RHVTQNQYAAFLEDRFSLTERLALLGQLRYNHMnmDWRFQGPQEESRA--RTYVFSTWSLGPSYA-----------LTDN 494
Cdd:TIGR01782 501 YTVTEDTTAAYAMANFDTGLRLRGNVGVRYERT--DQTSDGWQSQPAAngTGSVLVPVSADRDYTdvlpslnlaydLTDD 578
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 495 LTLYANYTT-------GQEPGNDLFFLSPTQTDLPLT---------RARQWEAGAKGQFwDNKGEATLALYELRKDNLFV 558
Cdd:TIGR01782 579 LVLRFAASKtitrpdfGDLAANTSLSDDGTGGTVTVSggnpdlkpyESDNLDLSLEWYF-GPGGLLSAAVFYKDIKNFIV 657
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 559 PDAQRPDALNAVGRQTS----------------RGIELGVVLR------PDDRWELAGNAAYTHARyDDYRGGSPLRsyN 616
Cdd:TIGR01782 658 TTTSTETNDGGGGLVVAgvlvsrpvnggkagkiRGVELGYQQTfdflpgPLSGFGVQANYTYVDSE-ADPSVDGVQR--R 734
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 617 GNRPAYIPDWTANLSVHYQ---ATARLGLASSLRYVGSS--YNDDANQRKMRAYTTLDLAADYQLTPIVDVGFRIRNATN 691
Cdd:TIGR01782 735 KLPLPGLSKNTANATLYYEkggFSARLSYNYRSDYLLDVggSNINRLDRYVDPRGQLDLSASYQVSDHLSLGLQASNLTN 814
|
490 500
....*....|....*....|....
gi 2310150666 692 Q-LYAY--QRTYPDQALIAPPRSY 712
Cdd:TIGR01782 815 EpSRWYtgGKQRPREYVETGRTYM 838
|
|
| MtrB_PioB |
pfam11854 |
Putative outer membrane beta-barrel porin, MtrB/PioB; MtrB-PioB is a family of bacterial ... |
484-688 |
8.30e-03 |
|
Putative outer membrane beta-barrel porin, MtrB/PioB; MtrB-PioB is a family of bacterial putative outer membrane porins. This family, is secreted as part of the pio (phototrophic iron oxidation) operon that has been found to couple the oxidation of ferrous iron [Fe(II)] to reductive CO2 fixation using light energy. PioABC is found in Rhodopseudomonas palustris and MtrB-PioB is likely to be a beta-barrel porin. Similar to other outer membrane porins, PioB and MtrB are predicted to have long loops protruding into the extracellular space and short turns on the periplasmic side.
Pssm-ID: 432132 [Multi-domain] Cd Length: 632 Bit Score: 39.63 E-value: 8.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 484 SLGPSYALTDNLTLYANYT----TGQEPGNDLFFLSPTQTDLPL-TRARQWEAGAK--GQFWDNKGEATLALYELRKDNL 556
Cdd:pfam11854 122 GLGFAYTPDSNWKVYVRYShenkTGTKLSGGGLLTQSVNLPEPVdYTTDTLDAGVNysGDNWQLAVGYNGSLFRNDYDAL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 557 FVPDAQRPDALNAVGRQTSRgielgVVLRPD--------------DRWELAGNAAYTHARYDD---YRGGSPLRSYNGNr 619
Cdd:pfam11854 202 SWDNPFFNPTFGAAYSGAMR-----LALPPDnqahqlslsgqynlGRTRLSGRLAYGRMTQDEaliPAPALPAQSLDGE- 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2310150666 620 payIPDWTANLSVHYQATARLGLASSLRY------------VGSSYNDDAN-QRKMRAY----TTLDLAADYQLTP--IV 680
Cdd:pfam11854 276 ---VDTLLANLKLTSRLTPDLRLTASYDYydrdnrtpvleyPQSSTTGVTGgTRRNTPYdftrQKAKLAADYRLARgyKL 352
|
....*...
gi 2310150666 681 DVGFRIRN 688
Cdd:pfam11854 353 EAGYDYEQ 360
|
|
| |
