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Conserved domains on  [gi|2278621977|ref|WP_255512971|]
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MULTISPECIES: Osc7112_2153 family protein [unclassified Tychonema]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Osc7112_2153fam NF040661
Osc7112_2153 family protein; This rare, small cyanobacterial protein, about 80 amino acids in ...
 1-76 7.48e-41

Osc7112_2153 family protein; This rare, small cyanobacterial protein, about 80 amino acids in length, has a signal peptide and a pair of invariant Cys residues that suggest disulfide bond formation. The protein regularly is found encoded just a few genes away from exosortase O (XrtO), but the significance of that finding is unclear.


:

Pssm-ID: 468627  Cd Length: 75  Bit Score: 128.01  E-value: 7.48e-41
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2278621977  1 MKRTFLLSSTILAIITVLQFSQASKAQPTPATVQSTVNESSETPFSSNQSTwRRCSDRNGGNYPCPRFVMPSESEE 76
Cdd:NF040661   1 MKRTVLISSTILAIITVLELSQASKALPTPATVKPTVNNSVETLFNSNQSM-RRCRDKDGGKYPCPRFVMPQESAE 75
 
Name Accession Description Interval E-value
Osc7112_2153fam NF040661
Osc7112_2153 family protein; This rare, small cyanobacterial protein, about 80 amino acids in ...
 1-76 7.48e-41

Osc7112_2153 family protein; This rare, small cyanobacterial protein, about 80 amino acids in length, has a signal peptide and a pair of invariant Cys residues that suggest disulfide bond formation. The protein regularly is found encoded just a few genes away from exosortase O (XrtO), but the significance of that finding is unclear.


Pssm-ID: 468627  Cd Length: 75  Bit Score: 128.01  E-value: 7.48e-41
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2278621977  1 MKRTFLLSSTILAIITVLQFSQASKAQPTPATVQSTVNESSETPFSSNQSTwRRCSDRNGGNYPCPRFVMPSESEE 76
Cdd:NF040661   1 MKRTVLISSTILAIITVLELSQASKALPTPATVKPTVNNSVETLFNSNQSM-RRCRDKDGGKYPCPRFVMPQESAE 75
 
Name Accession Description Interval E-value
Osc7112_2153fam NF040661
Osc7112_2153 family protein; This rare, small cyanobacterial protein, about 80 amino acids in ...
 1-76 7.48e-41

Osc7112_2153 family protein; This rare, small cyanobacterial protein, about 80 amino acids in length, has a signal peptide and a pair of invariant Cys residues that suggest disulfide bond formation. The protein regularly is found encoded just a few genes away from exosortase O (XrtO), but the significance of that finding is unclear.


Pssm-ID: 468627  Cd Length: 75  Bit Score: 128.01  E-value: 7.48e-41
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2278621977  1 MKRTFLLSSTILAIITVLQFSQASKAQPTPATVQSTVNESSETPFSSNQSTwRRCSDRNGGNYPCPRFVMPSESEE 76
Cdd:NF040661   1 MKRTVLISSTILAIITVLELSQASKALPTPATVKPTVNNSVETLFNSNQSM-RRCRDKDGGKYPCPRFVMPQESAE 75
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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