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Conserved domains on  [gi|2267659504|ref|WP_253873943|]
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ketoacyl-ACP synthase III [Promicromonospora umidemergens]

Protein Classification

3-oxoacyl-ACP synthase III family protein( domain architecture ID 11417379)

3-oxoacyl-ACP synthase III family protein such as Pseudomonas aeruginosa 2-heptyl-4(1H)-quinolone synthase subunit PqsC, which with PqsB, forms a complex that catalyzes the condensation of 2-aminobenzoylacetate (2-ABA) and octanoyl-CoA to form 2-heptyl-4(1H)-quinolone

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FabH COG0332
3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl- ...
36-394 2.99e-89

3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl-[acyl-carrier-protein] synthase III is part of the Pathway/BioSystem: Fatty acid biosynthesis


:

Pssm-ID: 440101 [Multi-domain]  Cd Length: 323  Bit Score: 272.37  E-value: 2.99e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  36 ARIVDVAVHLPERTRDVADAERDLHRRNPKVAPRlpmvsrlTGVRRVHVADDDQQASDLAVAASRTVLDRAGLRPQDVDL 115
Cdd:COG0332     3 VRILGTGSYLPERVVTNDDLEKRLDTSDEWIEER-------TGIRERRIAAPDETTSDLAVEAARKALEAAGIDPEDIDL 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 116 LIFASATQDMIEPATSHITAAKLG-VRAPVMDVKNACNSVLNGIEVAEALIGTGRYRRVLVACGEMPTRGVRWDvpDRRT 194
Cdd:COG0332    76 IIVATVTPDYLFPSTACLVQHKLGaKNAAAFDINAACSGFVYALSVAAALIRSGQAKNVLVVGAETLSRIVDWT--DRST 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 195 YamsaagYTMSDAGAAVLVEatgagsgtggadafeddlaaelarlvePTDRPSGILASAFTAESQHWDVGMLPSGGTVNP 274
Cdd:COG0332   154 C------VLFGDGAGAVVLE---------------------------ASEEGPGILGSVLGSDGSGADLLVVPAGGSRNP 200
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 275 R---DPERSYFEIDGSRLREAFLALGPGPVGQALDQAGVTMDDVALVAVHQVAVGYLEDVHRALGVPADRTIVTVADHGN 351
Cdd:COG0332   201 PspvDEGDHYLRMDGREVFKFAVRNLPEVIREALEKAGLTLDDIDWFIPHQANLRIIEAVAKRLGLPEEKVVVNIDRYGN 280
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 2267659504 352 IASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVVRW 394
Cdd:COG0332   281 TSAASIPLALDEALREGRIKPGDLVLLAGFGAGLTWGAAVLRW 323
 
Name Accession Description Interval E-value
FabH COG0332
3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl- ...
36-394 2.99e-89

3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl-[acyl-carrier-protein] synthase III is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440101 [Multi-domain]  Cd Length: 323  Bit Score: 272.37  E-value: 2.99e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  36 ARIVDVAVHLPERTRDVADAERDLHRRNPKVAPRlpmvsrlTGVRRVHVADDDQQASDLAVAASRTVLDRAGLRPQDVDL 115
Cdd:COG0332     3 VRILGTGSYLPERVVTNDDLEKRLDTSDEWIEER-------TGIRERRIAAPDETTSDLAVEAARKALEAAGIDPEDIDL 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 116 LIFASATQDMIEPATSHITAAKLG-VRAPVMDVKNACNSVLNGIEVAEALIGTGRYRRVLVACGEMPTRGVRWDvpDRRT 194
Cdd:COG0332    76 IIVATVTPDYLFPSTACLVQHKLGaKNAAAFDINAACSGFVYALSVAAALIRSGQAKNVLVVGAETLSRIVDWT--DRST 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 195 YamsaagYTMSDAGAAVLVEatgagsgtggadafeddlaaelarlvePTDRPSGILASAFTAESQHWDVGMLPSGGTVNP 274
Cdd:COG0332   154 C------VLFGDGAGAVVLE---------------------------ASEEGPGILGSVLGSDGSGADLLVVPAGGSRNP 200
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 275 R---DPERSYFEIDGSRLREAFLALGPGPVGQALDQAGVTMDDVALVAVHQVAVGYLEDVHRALGVPADRTIVTVADHGN 351
Cdd:COG0332   201 PspvDEGDHYLRMDGREVFKFAVRNLPEVIREALEKAGLTLDDIDWFIPHQANLRIIEAVAKRLGLPEEKVVVNIDRYGN 280
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 2267659504 352 IASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVVRW 394
Cdd:COG0332   281 TSAASIPLALDEALREGRIKPGDLVLLAGFGAGLTWGAAVLRW 323
KAS_III cd00830
Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty ...
36-392 9.64e-74

Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.


Pssm-ID: 238426 [Multi-domain]  Cd Length: 320  Bit Score: 232.43  E-value: 9.64e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  36 ARIVDVAVHLPERTRDVADAERDLHrrnpkvAPRLPMVSRlTGVRRVHVADDDQQASDLAVAASRTVLDRAGLRPQDVDL 115
Cdd:cd00830     2 ARILGIGSYLPERVVTNDELEKRLD------TSDEWIRTR-TGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 116 LIFASATQDMIEPATSHITAAKLGVR-APVMDVKNACNSVLNGIEVAEALIGTGRYRRVLVACGEMPTRGVRWDvpDRRT 194
Cdd:cd00830    75 IIVATSTPDYLFPATACLVQARLGAKnAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRILDWT--DRST 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 195 YAMSAAGytmsdAGAAVLveatgagsgtggadafeddlaaelarlvEPTDRPSGILASAFTAESQHWDVGMLPSGGTVNP 274
Cdd:cd00830   153 AVLFGDG-----AGAVVL----------------------------EATEEDPGILDSVLGSDGSGADLLTIPAGGSRSP 199
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 275 RDPERS---YFEIDGSRLREAFLALGPGPVGQALDQAGVTMDDVALVAVHQVAVGYLEDVHRALGVPADRTIVTVADHGN 351
Cdd:cd00830   200 FEDAEGgdpYLVMDGREVFKFAVRLMPESIEEALEKAGLTPDDIDWFVPHQANLRIIEAVAKRLGLPEEKVVVNLDRYGN 279
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 2267659504 352 IASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVV 392
Cdd:cd00830   280 TSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320
PRK09352 PRK09352
beta-ketoacyl-ACP synthase 3;
36-394 1.60e-53

beta-ketoacyl-ACP synthase 3;


Pssm-ID: 236475 [Multi-domain]  Cd Length: 319  Bit Score: 179.88  E-value: 1.60e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  36 ARIVDVAVHLPERTRDVADAERdlhrrnpkvaprlpMV--------SRlTGVRRVHVADDDQQASDLAVAASRTVLDRAG 107
Cdd:PRK09352    4 AKILGTGSYLPERVVTNDDLEK--------------MVdtsdewivTR-TGIKERRIAAPDETTSDLATEAAKKALEAAG 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 108 LRPQDVDLLIFASATQDMIEPATSHITAAKLGVR-APVMDVKNACNSVLNGIEVAEALIGTGRYRRVLVACGEMPTRGVR 186
Cdd:PRK09352   69 IDPEDIDLIIVATTTPDYAFPSTACLVQARLGAKnAAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIVD 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 187 WDvpDRRTYAMSAAGytmsdAGAAVLveatgagsgtggadafeddlaaelarlvEPTDRPsGILASAFTAESQHWDVGML 266
Cdd:PRK09352  149 WT--DRSTCVLFGDG-----AGAVVL----------------------------GASEEP-GILSTHLGSDGSYGDLLYL 192
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 267 PSGGTVNPrdPERSYFEIDGsrlREAF-LALG--PGPVGQALDQAGVTMDDVALVAVHQVAVGYLEDVHRALGVPADRTI 343
Cdd:PRK09352  193 PGGGSRGP--ASPGYLRMEG---REVFkFAVRelAKVAREALEAAGLTPEDIDWLVPHQANLRIIDATAKKLGLPMEKVV 267
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2267659504 344 VTVADHGNIASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVVRW 394
Cdd:PRK09352  268 VTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRW 318
ACP_syn_III_C pfam08541
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on ...
305-394 1.40e-25

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.


Pssm-ID: 430060  Cd Length: 90  Bit Score: 99.11  E-value: 1.40e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 305 LDQAGVTMDDVALVAVHQVAVGYLEDVHRALGVPADRTIVTVADHGNIASATLPLQLATALESGRLRRGDVVLLLGLAGG 384
Cdd:pfam08541   1 LEKAGLTPEDIDWFVPHQANLRIIDAVAKRLGLPPEKVVVNLDEYGNTSAASIPLALDEAVEEGKLKPGDLVLLVGFGAG 80
                          90
                  ....*....|
gi 2267659504 385 ISMGAMVVRW 394
Cdd:pfam08541  81 LTWGAALLRW 90
 
Name Accession Description Interval E-value
FabH COG0332
3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl- ...
36-394 2.99e-89

3-oxoacyl-[acyl-carrier-protein] synthase III [Lipid transport and metabolism]; 3-oxoacyl-[acyl-carrier-protein] synthase III is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 440101 [Multi-domain]  Cd Length: 323  Bit Score: 272.37  E-value: 2.99e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  36 ARIVDVAVHLPERTRDVADAERDLHRRNPKVAPRlpmvsrlTGVRRVHVADDDQQASDLAVAASRTVLDRAGLRPQDVDL 115
Cdd:COG0332     3 VRILGTGSYLPERVVTNDDLEKRLDTSDEWIEER-------TGIRERRIAAPDETTSDLAVEAARKALEAAGIDPEDIDL 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 116 LIFASATQDMIEPATSHITAAKLG-VRAPVMDVKNACNSVLNGIEVAEALIGTGRYRRVLVACGEMPTRGVRWDvpDRRT 194
Cdd:COG0332    76 IIVATVTPDYLFPSTACLVQHKLGaKNAAAFDINAACSGFVYALSVAAALIRSGQAKNVLVVGAETLSRIVDWT--DRST 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 195 YamsaagYTMSDAGAAVLVEatgagsgtggadafeddlaaelarlvePTDRPSGILASAFTAESQHWDVGMLPSGGTVNP 274
Cdd:COG0332   154 C------VLFGDGAGAVVLE---------------------------ASEEGPGILGSVLGSDGSGADLLVVPAGGSRNP 200
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 275 R---DPERSYFEIDGSRLREAFLALGPGPVGQALDQAGVTMDDVALVAVHQVAVGYLEDVHRALGVPADRTIVTVADHGN 351
Cdd:COG0332   201 PspvDEGDHYLRMDGREVFKFAVRNLPEVIREALEKAGLTLDDIDWFIPHQANLRIIEAVAKRLGLPEEKVVVNIDRYGN 280
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 2267659504 352 IASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVVRW 394
Cdd:COG0332   281 TSAASIPLALDEALREGRIKPGDLVLLAGFGAGLTWGAAVLRW 323
KAS_III cd00830
Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty ...
36-392 9.64e-74

Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.


Pssm-ID: 238426 [Multi-domain]  Cd Length: 320  Bit Score: 232.43  E-value: 9.64e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  36 ARIVDVAVHLPERTRDVADAERDLHrrnpkvAPRLPMVSRlTGVRRVHVADDDQQASDLAVAASRTVLDRAGLRPQDVDL 115
Cdd:cd00830     2 ARILGIGSYLPERVVTNDELEKRLD------TSDEWIRTR-TGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 116 LIFASATQDMIEPATSHITAAKLGVR-APVMDVKNACNSVLNGIEVAEALIGTGRYRRVLVACGEMPTRGVRWDvpDRRT 194
Cdd:cd00830    75 IIVATSTPDYLFPATACLVQARLGAKnAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRILDWT--DRST 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 195 YAMSAAGytmsdAGAAVLveatgagsgtggadafeddlaaelarlvEPTDRPSGILASAFTAESQHWDVGMLPSGGTVNP 274
Cdd:cd00830   153 AVLFGDG-----AGAVVL----------------------------EATEEDPGILDSVLGSDGSGADLLTIPAGGSRSP 199
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 275 RDPERS---YFEIDGSRLREAFLALGPGPVGQALDQAGVTMDDVALVAVHQVAVGYLEDVHRALGVPADRTIVTVADHGN 351
Cdd:cd00830   200 FEDAEGgdpYLVMDGREVFKFAVRLMPESIEEALEKAGLTPDDIDWFVPHQANLRIIEAVAKRLGLPEEKVVVNLDRYGN 279
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 2267659504 352 IASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVV 392
Cdd:cd00830   280 TSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320
PRK09352 PRK09352
beta-ketoacyl-ACP synthase 3;
36-394 1.60e-53

beta-ketoacyl-ACP synthase 3;


Pssm-ID: 236475 [Multi-domain]  Cd Length: 319  Bit Score: 179.88  E-value: 1.60e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  36 ARIVDVAVHLPERTRDVADAERdlhrrnpkvaprlpMV--------SRlTGVRRVHVADDDQQASDLAVAASRTVLDRAG 107
Cdd:PRK09352    4 AKILGTGSYLPERVVTNDDLEK--------------MVdtsdewivTR-TGIKERRIAAPDETTSDLATEAAKKALEAAG 68
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 108 LRPQDVDLLIFASATQDMIEPATSHITAAKLGVR-APVMDVKNACNSVLNGIEVAEALIGTGRYRRVLVACGEMPTRGVR 186
Cdd:PRK09352   69 IDPEDIDLIIVATTTPDYAFPSTACLVQARLGAKnAAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIVD 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 187 WDvpDRRTYAMSAAGytmsdAGAAVLveatgagsgtggadafeddlaaelarlvEPTDRPsGILASAFTAESQHWDVGML 266
Cdd:PRK09352  149 WT--DRSTCVLFGDG-----AGAVVL----------------------------GASEEP-GILSTHLGSDGSYGDLLYL 192
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 267 PSGGTVNPrdPERSYFEIDGsrlREAF-LALG--PGPVGQALDQAGVTMDDVALVAVHQVAVGYLEDVHRALGVPADRTI 343
Cdd:PRK09352  193 PGGGSRGP--ASPGYLRMEG---REVFkFAVRelAKVAREALEAAGLTPEDIDWLVPHQANLRIIDATAKKLGLPMEKVV 267
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2267659504 344 VTVADHGNIASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVVRW 394
Cdd:PRK09352  268 VTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRW 318
PRK12879 PRK12879
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
36-394 2.51e-48

3-oxoacyl-(acyl carrier protein) synthase III; Reviewed


Pssm-ID: 237245 [Multi-domain]  Cd Length: 325  Bit Score: 166.58  E-value: 2.51e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  36 ARIVDVAVHLPERTRDVADAERDLHRRNPKVAPRlpmvsrlTGVRRVHVADDDQQASDLAVAASRTVLDRAGLRPQDVDL 115
Cdd:PRK12879    5 ARITGIGTYVPPRVLTNDDLETFIDTSDEWIVQR-------TGIKERRIAHVEEYTSDLAIKAAERALARAGLDAEDIDL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 116 LIFASATQDMIEPATSHITAAKLGVR-APVMDVKNACNSVLNGIEVAEALIGTGRYRRVLVACGEMPTRGVRWDvpDRRT 194
Cdd:PRK12879   78 IIVATTTPDYLFPSTASQVQARLGIPnAAAFDINAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKVTDYT--DRTT 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 195 YAMSAAGytmsdAGAAVlveatgagsgtggadafeddlaaelarlVEPTDRPSGILASAFTAESQHWDVGMLPSGGTVNP 274
Cdd:PRK12879  156 CILFGDG-----AGAVV----------------------------LEATENEPGFIDYVLGTDGDGGDILYRTGLGTTMD 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 275 RDPE--RSYFEIDGsrlREAF---LALGPGPVGQALDQAGVTMDDVALVAVHQVAVGYLEDVHRALGVPADRTIVTVADH 349
Cdd:PRK12879  203 RDALsgDGYIVQNG---REVFkwaVRTMPKGARQVLEKAGLTKDDIDWVIPHQANLRIIESLCEKLGIPMEKTLVSVEYY 279
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 2267659504 350 GNIASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVVRW 394
Cdd:PRK12879  280 GNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324
PRK09258 PRK09258
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
69-394 3.05e-36

3-oxoacyl-(acyl carrier protein) synthase III; Reviewed


Pssm-ID: 181732  Cd Length: 338  Bit Score: 135.01  E-value: 3.05e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  69 RLPM--VSRLTGVRRVHVADDDQQASDLAVAASRTVLDRAGLRPQDVDLLIFASATQDMIEPATSHITAAKLGV--RAPV 144
Cdd:PRK09258   37 RLPPgqLEALTGIRERRWWPEGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLpkSCAN 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 145 MDVKNACNSVLNGIEVAEALIGTGRYRRVLVACGEMPTRGV-----RWDVPD--RRTYAMSAAGYTMSDAGAAVLveatg 217
Cdd:PRK09258  117 FDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIVeatidRLLAPEttREDFAQSFATLTLGSGAAAAV----- 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 218 agsgtggadafeddlaaeLARLVEPTDRPSgILASAFTAESQHWDvgmLPSGGtvnprdpeRSYFEIDGSRLREAFLALG 297
Cdd:PRK09258  192 ------------------LTRGSLHPRGHR-LLGGVTRAATEHHE---LCQGG--------RDGMRTDAVGLLKEGVELA 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 298 PGPVGQALDQAGVTMDDVALVAVHQVAVGYLEDVHRALGVPADRTIVTVADHGNIASATLPLQLATALESGRLRRGDVVL 377
Cdd:PRK09258  242 VDTWEAFLAQLGWAVEQVDRVICHQVGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVA 321
                         330
                  ....*....|....*..
gi 2267659504 378 LLGLAGGISMGAMVVRW 394
Cdd:PRK09258  322 LLGIGSGLNCSMLEVKW 338
PRK07204 PRK07204
beta-ketoacyl-ACP synthase III;
34-394 1.33e-34

beta-ketoacyl-ACP synthase III;


Pssm-ID: 235964  Cd Length: 329  Bit Score: 130.34  E-value: 1.33e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  34 PVARIVDVAVHLPERTRDVADAERDLHRRNPKVAPRLPMVSRltgvrrvHVADDdQQASDLAVAASRTVLDRAGLRPQDV 113
Cdd:PRK07204    3 RYISIKGIGTYLPKRKVDSLELDKKLDLPEGWVLKKSGVKTR-------HFVDG-ETSSYMGAEAAKKAVEDAKLTLDDI 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 114 DLLIFASATQDMIEPATSHITAAKLGVRA---PVMDVKNACNSVLNGIEVAEALIGTGRYRRVLVACGEMPTRGVRWDvp 190
Cdd:PRK07204   75 DCIICASGTIQQAIPCTASLIQEQLGLQHsgiPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVGLNWG-- 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 191 DRRTYAMsaagytMSDAGAAVLVEAtgagsgtggadafeddlaaelarlvepTDRPSGILASAFTAESQHWDVGMLPSGG 270
Cdd:PRK07204  153 QNESCIL------FGDGAAAVVITK---------------------------GDHSSRILASHMETYSSGAHLSEIRGGG 199
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 271 T-VNPRDP-----ERSYFEIDGSRLREAFLALGPGPVGQALDQAGVTMDDVALVAVHQVAVGYLEDVHRALGVPADRTIV 344
Cdd:PRK07204  200 TmIHPREYseerkEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQASGPAMRLIRKKLGVDEERFVT 279
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 2267659504 345 TVADHGNIASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVVRW 394
Cdd:PRK07204  280 IFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329
init_cond_enzymes cd00827
"initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, ...
36-392 1.50e-33

"initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.


Pssm-ID: 238423 [Multi-domain]  Cd Length: 324  Bit Score: 127.55  E-value: 1.50e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  36 ARIVDVAVHLPERTRDVADAERdlhrrnpkvAPRLPMVSRLTGVRRVHVADDDQQASDLAVAASRTVLDRAGLRPQDVDL 115
Cdd:cd00827     2 VGIEAIGAYLPRYRVDNEELAE---------GLGVDPGKYTTGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGL 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 116 LIFASATQDMIEPATSHITAAKLG-VRAPVMDVKNACNSVLNGIEVAEALIGTGRYRRVLVACGemptrgvrwDVPDRRT 194
Cdd:cd00827    73 LIVATESPIDKGKSAATYLAELLGlTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVAS---------DIASYLL 143
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 195 YAMSAAGYTMSDAGAAVLVEatgagsgtggadafeddlaaelarlVEPTDRPSGILASAFTAE-SQHWDVGMLPSGGTVN 273
Cdd:cd00827   144 DEGSALEPTLGDGAAAMLVS-------------------------RNPGILAAGIVSTHSTSDpGYDFSPYPVMDGGYPK 198
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 274 PRDPERSYF---EIDGSRLREAFLALGPGPVGQALDQAGVTmDDVALVAVHQV-AVGYLEDVHRALGVPADRTIVT---- 345
Cdd:cd00827   199 PCKLAYAIRltaEPAGRAVFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPnGKKILEAVAKKLGGPPEKASQTrwil 277
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 2267659504 346 VADHGNIASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVV 392
Cdd:cd00827   278 LRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324
PRK05963 PRK05963
beta-ketoacyl-ACP synthase III;
37-394 2.01e-30

beta-ketoacyl-ACP synthase III;


Pssm-ID: 180328 [Multi-domain]  Cd Length: 326  Bit Score: 119.05  E-value: 2.01e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  37 RIVDVAVHLPERTRDVADAERDLhrrnpkvAPRLPMVSRLTGVRRVHVADDDQQASDLAVAASRTVLDRAGLRPQDVDLL 116
Cdd:PRK05963    5 RIAGFGHAVPDRRVENAEIEAQL-------GLETGWIERRTGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALT 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 117 IFASATQDMIEPATSHITAAKLGV-RAPVMDVKNACNSVLNGIEVAEALIGTGRyRRVLVACGEMPTRgvRWDVPDRRTY 195
Cdd:PRK05963   78 LLATSTPDHLLPPSAPLLAHRLGLqNSGAIDLAGACAGFLYALVLADGFVRAQG-KPVLVVAANILSR--RINMAERASA 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 196 AMSAagytmsDAGAAVLVEatgagsgtggadafeddlaaelarlvePTDRP-SGILASAFTAESQHWDVGMLPSGGTVNP 274
Cdd:PRK05963  155 VLFA------DAAGAVVLA---------------------------PSAKAnSGVLGSQLISDGSHYDLIKIPAGGSARP 201
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 275 ----RDPERSYFEI-DGSRLREAFLALGPGPVGQALDQAGVTMDDVALVAVHQVAVGYLEDVHRALGVPADRTIVTVADH 349
Cdd:PRK05963  202 fapeRDASEFLMTMqDGRAVFTEAVRMMSGASQNVLASAAMTPQDIDRFFPHQANARIVDKVCETIGIPRAKAASTLETY 281
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 2267659504 350 GNIASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVVRW 394
Cdd:PRK05963  282 GNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326
PLN02326 PLN02326
3-oxoacyl-[acyl-carrier-protein] synthase III
77-394 9.75e-28

3-oxoacyl-[acyl-carrier-protein] synthase III


Pssm-ID: 215185  Cd Length: 379  Bit Score: 112.52  E-value: 9.75e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  77 TGVRRVHVADDDQQASDLAVAASRTVLDRAGLRPQDVDLLIFASATQDMIEPATSHITAAkLGVRAPV-MDVKNACNSVL 155
Cdd:PLN02326   82 TGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAA-LGCTNALaFDLTAACSGFV 160
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 156 NGIEVAEALIGTGRYRRVLVACGEMPTRGVRWDvpDRRTYAMsaagytMSDAGAAVLVEATGagsgtggadafeDDLAAE 235
Cdd:PLN02326  161 LGLVTAARFIRGGGYKNVLVIGADALSRYVDWT--DRGTCIL------FGDGAGAVVLQACD------------DDEDGL 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 236 LARLVEPTDRPSGILASAFTAESQHWDVGMLPSGGTVNPRDPERSYFEIDGsrlREAF---LALGPGPVGQALDQAGVTM 312
Cdd:PLN02326  221 LGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNG---KEVFkfaVRCVPQVIESALQKAGLTA 297
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 313 DDVALVAVHQVAVGYLEDVHRALGVPADRTIVTVADHGNIASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVV 392
Cdd:PLN02326  298 ESIDWLLLHQANQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIV 377

                  ..
gi 2267659504 393 RW 394
Cdd:PLN02326  378 RW 379
fabH CHL00203
3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
73-394 2.80e-27

3-oxoacyl-acyl-carrier-protein synthase 3; Provisional


Pssm-ID: 164577 [Multi-domain]  Cd Length: 326  Bit Score: 110.42  E-value: 2.80e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  73 VSRLTGVRRVHVADDDQQASDLAVAASRTVLDRAGLRPQDVDLLIFASATQDMIEPATSHITAAKLGVRAPVMDVKNACN 152
Cdd:CHL00203   33 ISTRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRAVAFDITAACS 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 153 SVLNGIEVAEALIGTGRYRRVLVACGEMPTRGVRWDvpDRRTYAMSAAGytmsdAGAAVLVEATGAGSGTggadaFEDDL 232
Cdd:CHL00203  113 GFILALVTATQFIQNGSYKNILVVGADTLSKWIDWS--DRKTCILFGDG-----AGAAIIGASYENSILG-----FKLCT 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 233 AAELARLVEPTDRPSgilasaftaESQHWDVGMLPSGgtvnprdpERSYFEIDGSRLREAFLALGPGPVGQALDQAGVTM 312
Cdd:CHL00203  181 DGKLNSHLQLMNKPV---------NNQSFGTTKLPQG--------QYQSISMNGKEVYKFAVFQVPAVIIKCLNALNISI 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 313 DDVALVAVHQVAVGYLEDVHRALGVPADRTIVTVADHGNIASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVV 392
Cdd:CHL00203  244 DEVDWFILHQANKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVL 323

                  ..
gi 2267659504 393 RW 394
Cdd:CHL00203  324 KW 325
ACP_syn_III_C pfam08541
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on ...
305-394 1.40e-25

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.


Pssm-ID: 430060  Cd Length: 90  Bit Score: 99.11  E-value: 1.40e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 305 LDQAGVTMDDVALVAVHQVAVGYLEDVHRALGVPADRTIVTVADHGNIASATLPLQLATALESGRLRRGDVVLLLGLAGG 384
Cdd:pfam08541   1 LEKAGLTPEDIDWFVPHQANLRIIDAVAKRLGLPPEKVVVNLDEYGNTSAASIPLALDEAVEEGKLKPGDLVLLVGFGAG 80
                          90
                  ....*....|
gi 2267659504 385 ISMGAMVVRW 394
Cdd:pfam08541  81 LTWGAALLRW 90
PRK06840 PRK06840
3-oxoacyl-ACP synthase;
33-394 5.49e-21

3-oxoacyl-ACP synthase;


Pssm-ID: 235872  Cd Length: 339  Bit Score: 92.76  E-value: 5.49e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  33 RPVARIVDVAVHLPERtrdVADAERDLHRRNpkvAPRLPMVSRLtGVRRVHVADDDQQASDLAVAASRTVLDRAGLRPQD 112
Cdd:PRK06840    2 EMNVGIVGTGVYLPKD---VMTAEEIAEKTG---IPEEVVIEKF-GIYEKPVPGPEDHTSDMAIAAAKPALKQAGVDPAA 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 113 VDLLI-FASATQDMIEPATSHITAAKLGV-RAPVMDVKNACNSVLNGIEVAEALIGT-GRYRRVLVACGEMPTRGVRWDV 189
Cdd:PRK06840   75 IDVVIyIGSEHKDYPVWSSAPKIQHEIGAkNAWAFDIMAVCASFPIALKVAKDLLYSdPSIENVLLVGGYRNSDLVDYDN 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 190 PdrRTYAMsaagYTMSDAGAAVLveatgagsgtggadafeddLAAELARLVeptdrpsgILASAF-TAESQHWDVGMlPS 268
Cdd:PRK06840  155 P--RTRFM----FNFAAGGSAAL-------------------LKKDAGKNR--------ILGSAIiTDGSFSEDVRV-PA 200
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 269 GGTVNPRDPE---RSYFEID-------GSRLREAFLALGPGPVGQALDQAGVTMDDVALVAVHQVAVGYLEDVHRALGVP 338
Cdd:PRK06840  201 GGTKQPASPEtveNRQHYLDvidpesmKERLDEVSIPNFLKVIREALRKSGYTPKDIDYLAILHMKRSAHIALLEGLGLT 280
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2267659504 339 ADRTIVtVADHGNIASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVVRW 394
Cdd:PRK06840  281 EEQAIY-LDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRW 335
BH0617 COG3424
Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport and ...
36-394 4.02e-12

Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442650 [Multi-domain]  Cd Length: 351  Bit Score: 66.70  E-value: 4.02e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  36 ARIVDVAVHLPE---RTRDVADAERDLHRRNPKVAPRLPMVSRLTGVRRVH-VADDD----------------QQASDLA 95
Cdd:COG3424     2 ARILSIATAVPPhryTQEEIAEFAAELFGLDERDRRRLRRLFENSGIETRHsVLPLEwyleppsfgernalyiEEALELA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  96 VAASRTVLDRAGLRPQDVDLLIFASATQDMIePATSHITAAKLG-----VRAPV--MdvknACNSVLNGIEVAEALIGTG 168
Cdd:COG3424    82 EEAARRALDKAGLDPEDIDHLVTVSCTGFAA-PGLDARLINRLGlrpdvRRLPVggM----GCAAGAAGLRRAADFLRAD 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 169 RYRRVLVACGEMPTRGVRWDVPDRRTyAMSAAGYtmSDAGAAVLVEAtgagsgtggadafeDDLAAELARLVEptdrpsg 248
Cdd:COG3424   157 PDAVVLVVCVELCSLTFQRDDDSKDN-LVANALF--GDGAAAVVVSG--------------DPRPGPGPRILA------- 212
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 249 iLASAFTAESQH---WDVGmlpSGGtvnprdpersyFEIDGSR-----LREAFlalgPGPVGQALDQAGVTMDDVALVAV 320
Cdd:COG3424   213 -FRSYLIPDTEDvmgWDVG---DTG-----------FRMVLSPevpdlIAEHL----APAVEPLLARHGLTIEDIDHWAV 273
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 321 H----QVavgyLEDVHRALGVPADRTIVT---VADHGNIASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMVVR 393
Cdd:COG3424   274 HpggpKV----LDAVEEALGLPPEALAHSrevLREYGNMSSATVLFVLERLLEEGAPAPGERGLAMAFGPGFTAELVLLR 349

                  .
gi 2267659504 394 W 394
Cdd:COG3424   350 W 350
ACP_syn_III pfam08545
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; This domain is found on 3-Oxoacyl- ...
145-214 2.05e-09

3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.180, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria.


Pssm-ID: 430064 [Multi-domain]  Cd Length: 80  Bit Score: 53.67  E-value: 2.05e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 145 MDVKNACNSVLNGIEVAEALIGTGRYRRVLVACGEMPTRGVRWDvpDRRTyamsaaGYTMSDAGAAVLVE 214
Cdd:pfam08545   1 FDINAACSGFVYALSTAAALIRSGRAKNVLVIGAETLSKILDWT--DRST------AVLFGDGAGAVVLE 62
PRK12880 PRK12880
beta-ketoacyl-ACP synthase III;
36-179 2.31e-09

beta-ketoacyl-ACP synthase III;


Pssm-ID: 171793  Cd Length: 353  Bit Score: 58.44  E-value: 2.31e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  36 ARIVDVAVHLPERTRDVADAERDLHRRNPKVAPRLPMVSrltGVRRVHVADDDQQASDLAVAASRTVLDRAGLRPQDVDL 115
Cdd:PRK12880    8 AKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVI---GLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDA 84
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2267659504 116 LIFASATQDMIEPATSHITAAKLGVRAPVM--DVKNACNSVLNGIEVAEALIGTGrYRRVLVACGE 179
Cdd:PRK12880   85 LIVVTQSPDFFMPSTACYLHQLLNLSSKTIafDLGQACAGYLYGLFVAHSLIQSG-LGKILLICGD 149
CHS_like cd00831
Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, ...
91-391 8.58e-09

Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.


Pssm-ID: 238427 [Multi-domain]  Cd Length: 361  Bit Score: 56.85  E-value: 8.58e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  91 ASDLAVAASRTVLDRAGLRPQDVDLLIFASATqDMIEPATSHITAAKLGVRApvmDVK------NACNSVLNGIEVAEAL 164
Cdd:cd00831    85 ARELAEEAARGALDEAGLRPSDIDHLVVNTST-GNPTPSLDAMLINRLGLRP---DVKrynlggMGCSAGAIALDLAKDL 160
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 165 IGTGRYRRVLVACGEMPTRGVRWdvPDRRTYAMSAAGYtmSDAGAAVLVeATGAGSGTGGADAFEDDLAAelarlveptd 244
Cdd:cd00831   161 LEANPGARVLVVSTELCSLWYRG--PDHRSMLVGNALF--GDGAAAVLL-SNDPRDRRRERPLFELVRAA---------- 225
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 245 rpSGILASafTAESQHWDVGmlPSGGTVNprdpersyFEIDGSRLREAFLALGPGPVGQALdQAGVTMDDVALVAVHQ-- 322
Cdd:cd00831   226 --STLLPD--SEDAMGWHLG--EEGLTFV--------LSRDVPRLVEKNLERVLRKLLARL-GIGLFKLAFDHWCVHPgg 290
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2267659504 323 VAVgyLEDVHRALGVPADRTIV---TVADHGNIASATLPLQLATALESGRLRRGDVVLLLGLAGGISMGAMV 391
Cdd:cd00831   291 RAV--LDAVEKALGLSPEDLEAsrmVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAV 360
PRK07515 PRK07515
3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
95-214 1.15e-08

3-oxoacyl-(acyl carrier protein) synthase III; Reviewed


Pssm-ID: 236037  Cd Length: 372  Bit Score: 56.43  E-value: 1.15e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  95 AVAASRTVLDRAGLRPQDVDLLIFASATQDMIEPATS-HITAAkLGVRAPVMDVKNACNSVLNGIEVAEALIGTGRYRRV 173
Cdd:PRK07515   99 GVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAiEIQQA-LGIEGFAFDMNVACSSATFGIQTAANAIRSGSARRV 177
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 2267659504 174 LVACGEMPTRGVRWDvpDRRTYamsaagYTMSDAGAAVLVE 214
Cdd:PRK07515  178 LVVNPEICSGHLNFR--DRDSH------FIFGDVATAVIVE 210
SCP-x_thiolase cd00829
Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; ...
93-198 1.22e-06

Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.


Pssm-ID: 238425 [Multi-domain]  Cd Length: 375  Bit Score: 49.95  E-value: 1.22e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  93 DLAVAASRTVLDRAGLRPQDVDLLIFASATQDMIEPATSHITAAKLGVR-APVMDVKNACNSVLNGIEVAEALIGTGRYR 171
Cdd:cd00829    18 ELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLgKPATRVEAAGASGSAAVRAAAAAIASGLAD 97
                          90       100
                  ....*....|....*....|....*..
gi 2267659504 172 RVLVACGEMPTRGVRWDVPDRRTYAMS 198
Cdd:cd00829    98 VVLVVGAEKMSDVPTGDEAGGRASDLE 124
decarbox_cond_enzymes cd00825
decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new ...
92-392 2.56e-05

decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).


Pssm-ID: 238421 [Multi-domain]  Cd Length: 332  Bit Score: 45.70  E-value: 2.56e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  92 SDLAVAASRTVLDRAGLRPQDVDLLIFASATQDMIEPATSHITAAKLGVRAPVMDVKNACNSVLNGIEVAEALIGTGRYR 171
Cdd:cd00825    37 IVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQD 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 172 RVLVACGEMPTR--------GVRWDVPDR--RTYAMSAAGYTMSDAGAAVLVEatgagsgtggadafEDDLAAELARLVE 241
Cdd:cd00825   117 IVLAGGSEELAApmdcefdaMGALSTPEKasRTFDAAADGFVFGDGAGALVVE--------------ELEHALARGAHIY 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 242 PTDRPSGILASAFTAESQHWDVGMLPSGgtvnprdpersyfeidgsrlreaflalgpgpVGQALDQAGVTMDDVALVAVH 321
Cdd:cd00825   183 AEIVGTAATIDGAGMGAFAPSAEGLARA-------------------------------AKEALAVAGLTVWDIDYLVAH 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 322 QVAVGYLEDVHRALGVPADR-----TIVTVADHGNIASATLPLQLATALESGRL-------------------------R 371
Cdd:cd00825   232 GTGTPIGDVKELKLLRSEFGdkspaVSATKAMTGNLSSAAVVLAVDEAVLMLEHgfippsihieeldeaglnivtettpR 311
                         330       340
                  ....*....|....*....|.
gi 2267659504 372 RGDVVLLLGLAGGISMGAMVV 392
Cdd:cd00825   312 ELRTALLNGFGLGGTNATLVL 332
thiolase cd00751
Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of ...
91-178 4.95e-05

Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.


Pssm-ID: 238383 [Multi-domain]  Cd Length: 386  Bit Score: 45.16  E-value: 4.95e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  91 ASDLAVAASRTVLDRAGLRPQDVDLLIFASATQdmiEPATSHIT-----AAKLGVRAPVMDVKNACNSVLNGIEVAEALI 165
Cdd:cd00751    22 ADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQ---AGEGQNPArqaalLAGLPESVPATTVNRVCGSGLQAVALAAQSI 98
                          90
                  ....*....|...
gi 2267659504 166 GTGRYrRVLVACG 178
Cdd:cd00751    99 AAGEA-DVVVAGG 110
PRK04262 PRK04262
hypothetical protein; Provisional
84-175 5.06e-04

hypothetical protein; Provisional


Pssm-ID: 235266 [Multi-domain]  Cd Length: 347  Bit Score: 41.82  E-value: 5.06e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  84 VADDDQQASDLAVAASRTVLDRAGLRPQDVDLLIFASATQDMIEPATSHITAAKLGVrAPVM---DVKNACNSVLNGIEV 160
Cdd:PRK04262   44 VPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGA-TPDLtaaDLEFACKAGTAALQA 122
                          90
                  ....*....|....*
gi 2267659504 161 AEALIGTGRYRRVLV 175
Cdd:PRK04262  123 AMGLVKSGMIKYALA 137
cond_enzymes cd00327
Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) ...
91-392 3.05e-03

Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.


Pssm-ID: 238201 [Multi-domain]  Cd Length: 254  Bit Score: 38.96  E-value: 3.05e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  91 ASDLAVAASRTVLDRAGLRPQDVDLLIFASATQDMIEPATSHITAAKLGVR-APVMDVKNACNSVLNGIEVAEALIGTGR 169
Cdd:cd00327     7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISgGPAYSVNQACATGLTALALAVQQVQNGK 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 170 YRRVLVACGEMPTRGvrwdvpdrrtyamsaagytmsDAGAAVLVEatgagsgtggadafeddlaaELARLVEPTDRPSGI 249
Cdd:cd00327    87 ADIVLAGGSEEFVFG---------------------DGAAAAVVE--------------------SEEHALRRGAHPQAE 125
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504 250 LASAFTAesqhwdvgmlpsggtvnprdpersyfeIDGSRLREAFLALGPGP-VGQALDQAGVTMDDVALVAVHQVAVGYL 328
Cdd:cd00327   126 IVSTAAT---------------------------FDGASMVPAVSGEGLARaARKALEGAGLTPSDIDYVEAHGTGTPIG 178
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2267659504 329 EDVHRALGVPAD-----RTIVTVADHGNIASATLPLQLATAL-------ESGRLRRGDVVLLLGLAGGISMGAMVV 392
Cdd:cd00327   179 DAVELALGLDPDgvrspAVSATLIMTGHPLGAAGLAILDELLlmlehefIPPTPREPRTVLLLGFGLGGTNAAVVL 254
PaaJ COG0183
Acetyl-CoA acetyltransferase [Lipid transport and metabolism]; Acetyl-CoA acetyltransferase is ...
91-178 6.13e-03

Acetyl-CoA acetyltransferase [Lipid transport and metabolism]; Acetyl-CoA acetyltransferase is part of the Pathway/BioSystem: Fatty acid biosynthesis


Pssm-ID: 439953 [Multi-domain]  Cd Length: 391  Bit Score: 38.51  E-value: 6.13e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  91 ASDLAVAASRTVLDRAGLRPQDVDLLIFASATQDMIEPATSHITA--AKLGVRAPVMDVKNACNSVLNGIEVAEALIGTG 168
Cdd:COG0183    26 ADDLGAAVIKALLERAGLDPEAVDDVILGCVLQAGQGQNPARQAAllAGLPESVPAVTVNRVCGSGLQAVALAAQAIAAG 105
                          90
                  ....*....|
gi 2267659504 169 RYrRVLVACG 178
Cdd:COG0183   106 DA-DVVIAGG 114
PRK05790 PRK05790
putative acyltransferase; Provisional
88-178 9.98e-03

putative acyltransferase; Provisional


Pssm-ID: 180261 [Multi-domain]  Cd Length: 393  Bit Score: 37.82  E-value: 9.98e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2267659504  88 DQQASDLAVAASRTVLDRAGLRPQDVDLLIFA---SATQDMIEPATSHItAAKLGVRAPVMDVKNACNSVLNGIEVAEAL 164
Cdd:PRK05790   23 DVSAVELGAIVIKAALERAGVPPEQVDEVIMGqvlQAGAGQNPARQAAL-KAGLPVEVPALTINKVCGSGLKAVALAAQA 101
                          90
                  ....*....|....
gi 2267659504 165 IGTGRYrRVLVACG 178
Cdd:PRK05790  102 IRAGDA-DIVVAGG 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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