|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
11-775 |
3.78e-77 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 261.71 E-value: 3.78e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 11 IALVLGSLAVPAFGADDNQPTAKNDHLDTVVVLGTRRSDlTALQSAAPVDVLSGEQLQQTGATDLSGALtALSPSFNFPQ 90
Cdd:COG4771 1 LLLASLLLLLALAAQAADALAEDATELEEVVVTATRTEQ-SLSDAPASVSVITAEEIEKLGATDLADAL-RLLPGVSVTR 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 91 SPQGAFAGSIaqgaSLRGLASDQVLVLVNGKRRHSSANitrqslvngrgAAAVDLSLIPLSAIQRVEILRDGAAAQYGSD 170
Cdd:COG4771 79 SGGRGGSSGI----SIRGLGGDRVLVLIDGVPVNNPAL-----------GGGGDLSYIPPDDIERIEVIRGPASALYGSD 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 171 AIAGVINIVLKENDD--GGNLGYRLGGYDKGdgiQRKLSGWKGFALpNDGFLTLSFDAGSQDPASDTNPDNRIFYPGdts 248
Cdd:COG4771 144 AIGGVINIITKKPTDelEGSVSLGYGSNGNG---TYSGSLSLGGPG-DKLSFLLSGSYRDRDGYLDYRNGGFVGNSG--- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 249 vntpreqnnryrtwrwgagnvSDQYNVVANSEIGIGEGLTAYGFATYAHKNTDAEGFFDPPTTLRNNYGSNALARYPDGR 328
Cdd:COG4771 217 ---------------------YERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGDRDTTTDRGN 275
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 329 LpitrygledyavtgGLRFENEQLGKFDLALNHGNNTLKSNdrnainpsYGANSPSSIYTGKRENDQTNLTLDWVRDFpt 408
Cdd:COG4771 276 Y--------------SLRYNGDLGDNLDLSLYYSRTDRDST--------NGSLGGSTGSFSDSDDTTYGLELDLTYPL-- 331
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 409 dllFKPLTLSAGLAWRKENYQLSageaagwqngplfntvdpitgrrvpgyysgiTQVDAASLDRKVLGAYIDVEGQITEK 488
Cdd:COG4771 332 ---GGNHTLTLGAEYRYDDLDSS-------------------------------SFLGGADASRDTYGLFAQDEWKLTDK 377
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 489 FQAGVAVRTEHYSDFGDTT----NGKLSLRYDFTPQIAARATASTGYRAPSLvqsgmssfsvqvveqppgsgnyveVQQR 564
Cdd:COG4771 378 LTLTAGLRYDYYSTFGASNytafSPRLGLRYDLSDNLTLRASYGRGFRAPSL------------------------AELY 433
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 565 TLRANSPEAQALGGKALKPEESTNYSLGLVWRPLENA-SVTVDAYRINIDNRITLSDQLPASvvtpifagtpyaniQSAA 643
Cdd:COG4771 434 GSGTGTPGRYVLGNPDLKPETSDNYELGLEYRLGNGGlSLSLTGFYTDIKDLIVLVPVGPGP--------------GDVL 499
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 644 FYTNVADTRTDGIELTGNYQWDlqrwGRLNLSSGFAKNNTTITGLRDVGNIkgsqivgrntqglieDGTPDSKLTLSANW 723
Cdd:COG4771 500 QYENVGKARTYGLELELKYRLG----KGLTLTASYTYLDSKIDDGDTGEPL---------------PNVPPHKANLGLDY 560
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|..
gi 2263446656 724 LYENWGVTVAQRRYGEWKSLNATNPSLDQTYSPQWVTDLDVSYTFYKGVKVS 775
Cdd:COG4771 561 RLPKWWLLLLLTRYYGGRYVTPPSGRLEGYTPGYTLLDLRASYKLTKNLTLS 612
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
58-821 |
1.40e-67 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 236.19 E-value: 1.40e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 58 PVDVLSGEQLQQTGATDLsGALTALSPSFNFPQspqgaFAGSIAQGASLRGLASDQVLVLVNGKRRHSSanitrqslvng 137
Cdd:cd01347 1 SVSVITAEDIEKQPATSL-ADLLRRIPGVSVTR-----GGGGGGSTISIRGFGPDRTLVLVDGLPLASS----------- 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 138 RGAAAVDLSLIPLSAIQRVEILRDGAAAQYGSDAIAGVINIVLKE--NDDGGNLGYRLGGYDKGDGIqrklsgwkgfalp 215
Cdd:cd01347 64 NYGRGVDLNTIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRptDEFGGSVTAGYGSDNSGSSG------------- 130
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 216 NDGFLTLSFDAGSQDPASDTNPDNRiFYPGDTSVNTPREQNNRYRtwrwgagnvsdqYNVVANSEIGIGEGLTAYGFATY 295
Cdd:cd01347 131 GGGFDVSGALADDGAFGARLYGAYR-DGDGTIDGDGQADDSDEER------------YNVAGKLDWRPDDDTRLTLDAGY 197
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 296 AHKNTDaEGFFDPPTTLRNNYGSNALARYPDGRLPITRYGLEDYAVTGGLRFENEQLG-KFDLALNHGNNTLKSNDRNAI 374
Cdd:cd01347 198 QDQDAD-GPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGwTLRANLSYSYTDNDGDPLILN 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 375 NPSYGANSPSSIYTGKRENDQTNLTLDWVRDFPTDLLFKPLTLSAGLAWRKEnyqlsageaagwqngplfntvdpitgrr 454
Cdd:cd01347 277 GGNNAAGGDLGRSGYSSERDTTQLGFDAGLNAPFGTGPVAHTLTLGVEYRRE---------------------------- 328
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 455 vpgyysgitqvdaaSLDRKVLGAYIDVEGQITEKFQAGVAVRTEHY--------------SDFGDTTNGKLSLRYDFTPQ 520
Cdd:cd01347 329 --------------ELDEKQTALYAQDTIELTDDLTLTLGLRYDHYdqdskdtiaggttaKKSYSHWSPSLGLVYKLTDG 394
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 521 IAARATASTGYRAPSLVQSGMSSFSVQVVeqppgsgnyvevqqrtlranspeaqALGGKALKPEESTNYSLGLVWRPLEN 600
Cdd:cd01347 395 LSLYASYSQGFRAPSLGELYGGGSHGGTA-------------------------AVGNPNLKPEKSKQYELGLKYDPGDG 449
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 601 ASVTVDAYRINIDNRITLSDQLPASVVTpifagtpyaniqsaAFYTNVADTRTDGIELTGNYQWdlqrWGRLNLSSGFAK 680
Cdd:cd01347 450 LTLSAALFRIDIKNEIVSTPTNTGLGLV--------------TVYVNGGKARIRGVELEASYDL----TDGLGLTGSYTY 511
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 681 NNTTITglrdvgnikgsqIVGRNTQGLIEDGTPDSKLTLSANW--LYENWGVTVAQRRYGeWKSLNATNPSLDQTYSPQW 758
Cdd:cd01347 512 TDTEVK------------RTDGATTGNRLPGIPKHTANLGLDYelPDEGLTAGGGVRYRG-KQYADTANGNNTVKVPGYT 578
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2263446656 759 VTDLDVSYTFYKGVKVSVGAINLFDTHPDKADGAQlygvpkYSITSPEGAQGAFYYTSVSYDF 821
Cdd:cd01347 579 LVDLSASYQFTKNLTLRLGVNNLFDKDYYTSLSVR------GSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
287-820 |
1.28e-29 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 123.34 E-value: 1.28e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 287 LTAYGFATYAHKNTDAEGFFDPPTTLRNNYGSNALARYPDGRLPITRYGLEDYAVTGGLRFENEQLGKFDLALNHGNNTL 366
Cdd:pfam00593 9 LGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRYS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 367 KSNDRNAINPSYGANSPSSIYTGKRENDQT-NLTLDWVRDFPTDLLFKPLTLSAGLAWRKENYQlsageaagwqNGPLFN 445
Cdd:pfam00593 89 SLDGDYTSNSSGLSGAGDYLSDDRLYGLYGlDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDD----------AYDPYD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 446 TVDPITGRRvpgyysgitqvdaASLDRKVLGAYIDVEGQITEKFQAGVAVRTEHYSDFGDTTNG--------------KL 511
Cdd:pfam00593 159 PANPSSSSY-------------SDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGggdnfsrsysafspRL 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 512 SLRYDFTPQIAARATASTGYRAPSLVQSGMSSfsvqvveqppgsgnyvevqqrtlRANSPEAQALGGKALKPEESTNYSL 591
Cdd:pfam00593 226 GLVYKPTDNLSLYASYSRGFRAPSLGELYGSG-----------------------SGGGGGAVAGGNPDLKPETSDNYEL 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 592 GLVWRPlENASVTVDAYRINIDNRITlsdqlpasvvtpiFAGTPYANIQSAAFYTNVADTRTDGIELTGNYqwdlQRWGR 671
Cdd:pfam00593 283 GLKYDD-GRLSLSLALFYIDIKNLIT-------------SDPDGPGLGGTVYTYTNVGKARIRGVELELSG----RLWGL 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 672 LNLSSGFAKNNTTITglrDVGNIKGSQIvgrntqglieDGTPDSKLTLSANWLYEN--WGVTVAQrRYGEWKSLNATNPS 749
Cdd:pfam00593 345 GLSGGGYTYTDADDD---ADADDTGNPL----------PNVPRHTANLGLTYDFPLggWGARLGA-RYVGSGERRYGDAA 410
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2263446656 750 LDQTYSPQWVTDLDVSYTFYKGVKVSVGAINLFDTHPDKadgaqlYGVPKYSITSPEGAQGAFYYTSVSYD 820
Cdd:pfam00593 411 NTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKR------YYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
37-783 |
2.37e-23 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 105.94 E-value: 2.37e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 37 LDTVVVLGTRrSDLTALQSAAPVDVLSGEQLQQTGATDLSGAL-TALSPSFNFPQSPQGafagsiaQGASLRGLASDQVL 115
Cdd:TIGR01785 1 LDTVTVTATR-TRQVLSEAPASVSVISGEQIESKQANNLADALnTVPGVDVTGGGRPPG-------QSINIRGLQDNRVL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 116 VLVNGKRRHSsanitrqslvnGRGAAAVDLSLIPLSAIQRVEILRDGAAAQYGSDAIAGVINIVLKENDD----GGNLGY 191
Cdd:TIGR01785 73 VVVDGARQNY-----------QRGGAHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADllrpGQLFGG 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 192 RL-GGYDKGD-GIQRKLSGWKGFALPNDGFLTLS------FDAGSQDPA--SDTNPDNRIFYPGDTSVNTPR-EQNNRYR 260
Cdd:TIGR01785 142 LAkLSYGSNNnSFGGSVAVAGRLDDNLDALVAATyrdggnYRNGNKEEAtnSAYVQKNLLAKLGWQLDDAQRlEFSYFTT 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 261 TWRWgagnvSDQYNVVANSEI--GIGEGLTAYGFATYahkNTDAEGFFDPP------TTLRNNYGSNALARYPDGRLPIT 332
Cdd:TIGR01785 222 EGSL-----DEAQNSGPGTEYvlGSSSTLLASSTRDR---SATLTYNWTPEdnpwldATASLYYNRTENDNDRSARGVGR 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 333 RYG--LEDYAVTGGLRFENEQLGKFDLALN---HGNNTLKSNDRNAINPSYGANSPSSIytgkrendqTNLTLDWVRD-F 406
Cdd:TIGR01785 294 EEGyqYTTYGATLQNTSRFDVASWSTLTYGvdwMKDKRRTESFDPNSVTTIVPNPPSAK---------EYFFGLFLQDnI 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 407 PtdLLFKPLTLSAGLawRKENYQLSageaagwqngplfntvdpitgrrvPGYYSGITQVDaasldrkvlgayidvegqit 486
Cdd:TIGR01785 365 P--LLDDRLTLSAGL--RYDHYKLS------------------------PKTTADTEAVD-------------------- 396
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 487 ekfqagvavrtEHYSDFgdttNGKLSLRYDFTPQIAARATASTGYRAPSLVQSGMSSfsvqvvEQPPGSGNYVevqqrtl 566
Cdd:TIGR01785 397 -----------RSYSRW----SPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYGTG------DHPGTPGGYT------- 448
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 567 RANSPEaqalggkaLKPEESTNYSLG------LVWRPLENASVTVDAYRINIDNRITLSdqlpASVVTPIFAGTpyANIQ 640
Cdd:TIGR01785 449 FAPNPN--------LKPETSKTWELGanlsfdNLLLDNDQLQFKVAYFYNDVKDFIDLT----IGVTDNVTAGM--NNIT 514
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 641 SaafYTNVADTRTDGIELTGNYQWDLQRWGrLNLSSGFAKNNTTITGLRDVGNIKGSQIVGRNtqgliedgTPDSKLTLS 720
Cdd:TIGR01785 515 Q---YVNIDGARIRGIEASASYDAGLWATG-LSYGYTIGKDQNTNQWLSNIPPLKLVVTVGYR--------FPDRRLDLG 582
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2263446656 721 ANWLYENwgvtvAQRRYGEWKSLnATNPSLDQtysPQW-VTDLDVSYTF--YKGVKVSVGAINLFD 783
Cdd:TIGR01785 583 AKAAYYE-----RQSESPTTEDV-AANGLLTT---PGYtVVDLYATYQPnaVKGLTVRFGVNNLTD 639
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
14-662 |
1.95e-22 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 102.79 E-value: 1.95e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 14 VLGSLAVPAFGADDNQPTAKNDhldtVVVLGTRRSDLTALQSAAPVDVLSGEQLQQTGATDLSGALTALSPSFnfPQSPQ 93
Cdd:PRK13486 5 TLASVVIPCLGFSASSIAAAED----VMIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVD--VESGT 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 94 GAFAGsiaQGASLRGLASDQVLVLVNGKRRHSSANITRQslvngrGAAAVDLSLIP-LSAIQRVEILRDGAAAQYGSDAI 172
Cdd:PRK13486 79 GKTGG---LEISIRGMPASYTLILIDGVRQGGSSDVTPN------GFSAMNTGFMPpLAAIERIEVIRGPMSTLYGSDAM 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 173 AGVINIVLKENDD----GGNLGYRLGGYDKGdGIQRKLSGWKGFALPnDGFLTLSFDAGSQD-------PASDTNpDNRI 241
Cdd:PRK13486 150 GGVVNIITRKNADkwlsSVNAGLNLQESNKW-GNSSQFNFWSSGPLV-DDSVSLQVRGSTQQrqgssvtSLSDTA-ATRI 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 242 FYPGDtsvntpreqnnryrtwrwgagnvSDQYNVVANseigigegltaygfatYAHKNTDAEGFFDPPTTLRNNYGSNal 321
Cdd:PRK13486 227 PYPTE-----------------------SQNYNLGAR----------------LDWKASEQDVLWFDMDTTRQRYDNR-- 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 322 arypDGRLPitrygledyAVTGG----LRFE-NEQLGKFDLALNHGnnTLKSNDRNAINPSYGANSPSSIYT-------G 389
Cdd:PRK13486 266 ----DGQLG---------SLTGGydrtLRYErNKISAGYDHTFTFG--TWKSYLNWNETENKGRELVRSVLKrdkwglaG 330
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 390 K-RENDQTNLTLDwvrdfptDLLFKPLtlsaglawrKENYQLSAGeaAGWQNGPLFNTVdpitgrrvpgyysgITQVDAA 468
Cdd:PRK13486 331 QpRELKESNLILN-------SLLLTPL---------GESHLVTVG--GEFQSSSMKDGV--------------VLASTGE 378
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 469 SLDRKVLGAYIDVEGQITEKFQAGVAVRTEHYSDFGDTTNGKLSLRYDFTPQIAARATASTGYRAPSLVQ--SGMSSFSV 546
Cdd:PRK13486 379 TFRQKSWSVFAEDEWHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQlhKGISGVSG 458
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 547 QvveqppGSGNyvevqqrtlranspeaqALGGKALKPEESTNYSLGLVWRPLENASVTVDAYRINIDNRItlsdqlpasv 626
Cdd:PRK13486 459 Q------GKTN-----------------LLGNPDLKPEESVSYEAGVYYDNPAGLNANVTGFMTDFSNKI---------- 505
|
650 660 670
....*....|....*....|....*....|....*.
gi 2263446656 627 vtpifagTPYANIQSAAFYTNVADTRTDGIELTGNY 662
Cdd:PRK13486 506 -------VSYSINDNTNSYVNSGKARLHGVEFAGTL 534
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
11-775 |
3.78e-77 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 261.71 E-value: 3.78e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 11 IALVLGSLAVPAFGADDNQPTAKNDHLDTVVVLGTRRSDlTALQSAAPVDVLSGEQLQQTGATDLSGALtALSPSFNFPQ 90
Cdd:COG4771 1 LLLASLLLLLALAAQAADALAEDATELEEVVVTATRTEQ-SLSDAPASVSVITAEEIEKLGATDLADAL-RLLPGVSVTR 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 91 SPQGAFAGSIaqgaSLRGLASDQVLVLVNGKRRHSSANitrqslvngrgAAAVDLSLIPLSAIQRVEILRDGAAAQYGSD 170
Cdd:COG4771 79 SGGRGGSSGI----SIRGLGGDRVLVLIDGVPVNNPAL-----------GGGGDLSYIPPDDIERIEVIRGPASALYGSD 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 171 AIAGVINIVLKENDD--GGNLGYRLGGYDKGdgiQRKLSGWKGFALpNDGFLTLSFDAGSQDPASDTNPDNRIFYPGdts 248
Cdd:COG4771 144 AIGGVINIITKKPTDelEGSVSLGYGSNGNG---TYSGSLSLGGPG-DKLSFLLSGSYRDRDGYLDYRNGGFVGNSG--- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 249 vntpreqnnryrtwrwgagnvSDQYNVVANSEIGIGEGLTAYGFATYAHKNTDAEGFFDPPTTLRNNYGSNALARYPDGR 328
Cdd:COG4771 217 ---------------------YERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGDRDTTTDRGN 275
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 329 LpitrygledyavtgGLRFENEQLGKFDLALNHGNNTLKSNdrnainpsYGANSPSSIYTGKRENDQTNLTLDWVRDFpt 408
Cdd:COG4771 276 Y--------------SLRYNGDLGDNLDLSLYYSRTDRDST--------NGSLGGSTGSFSDSDDTTYGLELDLTYPL-- 331
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 409 dllFKPLTLSAGLAWRKENYQLSageaagwqngplfntvdpitgrrvpgyysgiTQVDAASLDRKVLGAYIDVEGQITEK 488
Cdd:COG4771 332 ---GGNHTLTLGAEYRYDDLDSS-------------------------------SFLGGADASRDTYGLFAQDEWKLTDK 377
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 489 FQAGVAVRTEHYSDFGDTT----NGKLSLRYDFTPQIAARATASTGYRAPSLvqsgmssfsvqvveqppgsgnyveVQQR 564
Cdd:COG4771 378 LTLTAGLRYDYYSTFGASNytafSPRLGLRYDLSDNLTLRASYGRGFRAPSL------------------------AELY 433
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 565 TLRANSPEAQALGGKALKPEESTNYSLGLVWRPLENA-SVTVDAYRINIDNRITLSDQLPASvvtpifagtpyaniQSAA 643
Cdd:COG4771 434 GSGTGTPGRYVLGNPDLKPETSDNYELGLEYRLGNGGlSLSLTGFYTDIKDLIVLVPVGPGP--------------GDVL 499
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 644 FYTNVADTRTDGIELTGNYQWDlqrwGRLNLSSGFAKNNTTITGLRDVGNIkgsqivgrntqglieDGTPDSKLTLSANW 723
Cdd:COG4771 500 QYENVGKARTYGLELELKYRLG----KGLTLTASYTYLDSKIDDGDTGEPL---------------PNVPPHKANLGLDY 560
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|..
gi 2263446656 724 LYENWGVTVAQRRYGEWKSLNATNPSLDQTYSPQWVTDLDVSYTFYKGVKVS 775
Cdd:COG4771 561 RLPKWWLLLLLTRYYGGRYVTPPSGRLEGYTPGYTLLDLRASYKLTKNLTLS 612
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
58-821 |
1.40e-67 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 236.19 E-value: 1.40e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 58 PVDVLSGEQLQQTGATDLsGALTALSPSFNFPQspqgaFAGSIAQGASLRGLASDQVLVLVNGKRRHSSanitrqslvng 137
Cdd:cd01347 1 SVSVITAEDIEKQPATSL-ADLLRRIPGVSVTR-----GGGGGGSTISIRGFGPDRTLVLVDGLPLASS----------- 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 138 RGAAAVDLSLIPLSAIQRVEILRDGAAAQYGSDAIAGVINIVLKE--NDDGGNLGYRLGGYDKGDGIqrklsgwkgfalp 215
Cdd:cd01347 64 NYGRGVDLNTIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRptDEFGGSVTAGYGSDNSGSSG------------- 130
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 216 NDGFLTLSFDAGSQDPASDTNPDNRiFYPGDTSVNTPREQNNRYRtwrwgagnvsdqYNVVANSEIGIGEGLTAYGFATY 295
Cdd:cd01347 131 GGGFDVSGALADDGAFGARLYGAYR-DGDGTIDGDGQADDSDEER------------YNVAGKLDWRPDDDTRLTLDAGY 197
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 296 AHKNTDaEGFFDPPTTLRNNYGSNALARYPDGRLPITRYGLEDYAVTGGLRFENEQLG-KFDLALNHGNNTLKSNDRNAI 374
Cdd:cd01347 198 QDQDAD-GPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGwTLRANLSYSYTDNDGDPLILN 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 375 NPSYGANSPSSIYTGKRENDQTNLTLDWVRDFPTDLLFKPLTLSAGLAWRKEnyqlsageaagwqngplfntvdpitgrr 454
Cdd:cd01347 277 GGNNAAGGDLGRSGYSSERDTTQLGFDAGLNAPFGTGPVAHTLTLGVEYRRE---------------------------- 328
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 455 vpgyysgitqvdaaSLDRKVLGAYIDVEGQITEKFQAGVAVRTEHY--------------SDFGDTTNGKLSLRYDFTPQ 520
Cdd:cd01347 329 --------------ELDEKQTALYAQDTIELTDDLTLTLGLRYDHYdqdskdtiaggttaKKSYSHWSPSLGLVYKLTDG 394
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 521 IAARATASTGYRAPSLVQSGMSSFSVQVVeqppgsgnyvevqqrtlranspeaqALGGKALKPEESTNYSLGLVWRPLEN 600
Cdd:cd01347 395 LSLYASYSQGFRAPSLGELYGGGSHGGTA-------------------------AVGNPNLKPEKSKQYELGLKYDPGDG 449
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 601 ASVTVDAYRINIDNRITLSDQLPASVVTpifagtpyaniqsaAFYTNVADTRTDGIELTGNYQWdlqrWGRLNLSSGFAK 680
Cdd:cd01347 450 LTLSAALFRIDIKNEIVSTPTNTGLGLV--------------TVYVNGGKARIRGVELEASYDL----TDGLGLTGSYTY 511
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 681 NNTTITglrdvgnikgsqIVGRNTQGLIEDGTPDSKLTLSANW--LYENWGVTVAQRRYGeWKSLNATNPSLDQTYSPQW 758
Cdd:cd01347 512 TDTEVK------------RTDGATTGNRLPGIPKHTANLGLDYelPDEGLTAGGGVRYRG-KQYADTANGNNTVKVPGYT 578
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2263446656 759 VTDLDVSYTFYKGVKVSVGAINLFDTHPDKADGAQlygvpkYSITSPEGAQGAFYYTSVSYDF 821
Cdd:cd01347 579 LVDLSASYQFTKNLTLRLGVNNLFDKDYYTSLSVR------GSGLYGYYGPGRTYYLSVSYKF 635
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
37-785 |
6.60e-52 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 192.35 E-value: 6.60e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 37 LDTVVVLGTRRsDLTALQSAAPVDVLSGEQLQQTGATDLSGALTALsPSFNFPQSpqGAFAGSIaqgaSLRGL--ASDQV 114
Cdd:COG1629 1 LEEVVVTATRT-DESLQDVPGSVSVISREQLEDQPATDLGDLLRRV-PGVSVTSA--GGGAGQI----SIRGFggGGNRV 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 115 LVLVNGKRrhssanitrqslVNGRGAAAVDLSLIPLSAIQRVEILRDGAAAQYGSDAIAGVINIVLKENDDG--GNLGYR 192
Cdd:COG1629 73 LVLVDGVP------------LNDPSGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGkgGEVSAS 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 193 LGGYDKGDGiqrklsgwkgfalpndgflTLSFDAGSQDpasdtnpdnrifypGDTSVNTPREQNNRYRTWrwgagNVSDQ 272
Cdd:COG1629 141 YGSYGTYRA-------------------SLSLSGGNGK--------------LAYRLSASYRDSDGYRDN-----SDSDR 182
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 273 YNVVANSEIGIGEGLTAYGFATYAHKNTDAEGFFDPPTTLRNNYGSNALARYPDGRLPITRYGledyaVTGGLRFEN-EQ 351
Cdd:COG1629 183 YNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLTLAALRPRGAMDDGTNPYSNDTDDNTRDR-----YSLSLEYEHlGD 257
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 352 LGKFDLALNHGNNTlkSNDRNAINPSYGANSPSSIYTGKRENDQTNLTLDWVRDFPTDLlfkplTLSAGLAWRKENYqls 431
Cdd:COG1629 258 GLKLSASAYYRYDD--TDLDSDFTPTPADGGTLEQTDFDNRTYGLELRLTYDLGFGGKH-----TLLVGLDYQRQDL--- 327
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 432 ageaagwqNGPLFNTVDPitgrrvPGYYSGITQVDAASLDRKVLGAYIDVEGQITEKFQAGVAVRTEHYS-DFGDTTNG- 509
Cdd:COG1629 328 --------DGSGYPLDLG------SGSLPTLTSGADDDGTTTSLALYAQDTYKLTDKLTLTAGLRYDYVSyDVDDTVTGt 393
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 510 --------------KLSLRYDFTPQIAARATASTGYRAPSLvqsgmssfsvqvveqppgsgnyvevqqRTLRANSPEAQA 575
Cdd:COG1629 394 dsasgsrsysafspSLGLTYQLSPNLSLYASYSRGFRAPTF---------------------------GELYANGTDPYS 446
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 576 LGGKALKPEESTNYSLGLVWRPLENA-SVTVDAYRINIDNRITlsdqlpaSVVTPIFAGTPyaniqsaAFYTNVADTRTD 654
Cdd:COG1629 447 VGNPDLKPETSTNYELGLRYRLLDGRlSLSLALFYSDVDNEIL-------SVPLPNDSGFS-------TYYTNAGKARSY 512
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 655 GIELTGNYQWdlqrWGRLNLSSGFAKNNTTITGLRD-VGNIKGSQIVGrntqgliedgTPDSKLTLSANW-LYENWGVTV 732
Cdd:COG1629 513 GVELELSYQL----TPGLSLNASYSYTDAKFDDDTDgSADLDGNRLPG----------VPPLTANLGLTYeFPGGWSLGL 578
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|...
gi 2263446656 733 AQRRYGEWKSLNATNPSLDQTYspqWVTDLDVSYTFYKGVKVSVGAINLFDTH 785
Cdd:COG1629 579 GVRYVGDRYLDDANTQGAPGGY---TLVDLGAGYRFGDNLTLSLGVDNLFDKK 628
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
11-785 |
1.38e-30 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 128.51 E-value: 1.38e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 11 IALVLGSLAVPAFGAddnqptAKNDHLDTVVVLGTRRSDLTALQSAAPVDVLSGEQLQQTGATDLSGALtALSPSFNFpq 90
Cdd:COG4772 3 RALAAALLLAAAAAA------EAATTLETVVVTGSRAAEARLKDVPGSVSVVDREELENQAATSLREVL-RRVPGVNV-- 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 91 spQGAFAGSIAQGASLRGLASD---QVLVLVNGkrrhssanitrqSLVN--GRGAAAVDLSLiPLSAIQRVEILRDGAAA 165
Cdd:COG4772 74 --QEEDGFGLRPNIGIRGLGPRrsrGITLLEDG------------IPIApaPYGDPAAYYFP-DLERMERIEVLRGAAAL 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 166 QYGSDAIAGVINIVLKE--NDDGGNLGYRLGGYDKG-----------------DGIQRKLSGWK--------------GF 212
Cdd:COG4772 139 RYGPQTVGGAINFVTRTipTAFGGELRVTGGSFGYRrthasvggtvgnfgylvEYSRKRGDGFRdnsgfdindfnaklGY 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 213 ALPNDGFLTLSF---DAGSQDPASDTnpdnrifypgDTSVNTPREQNNRYRTWRWGagnvsDQYNVVANSEIGIGEG--L 287
Cdd:COG4772 219 RLSDRQELTLKFqyyDEDANTPGGLT----------DAQFDADPRQSYRPADQFDT-----RRTQLSLRYEHQLSDNttL 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 288 TAYGFATYAHKNTDAEGFFDPPTTLRNNYGSNALARY---PDGRLpITRYGLEDYA--VTGGLRFENEqlgkfdlalnhg 362
Cdd:COG4772 284 TTTAYYNDFSRNWYIRQNTADPNTPGLGLRGNPRGYRsygIEPRL-THRFELGGVPhtLEVGLRYHRE------------ 350
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 363 nntlkSNDRNAINPSYGANSPSSIYTGKRENDQTNLTLdWVRDfpTDLLFKPLTLSAGLawRKENYQlsageaagwqngp 442
Cdd:COG4772 351 -----EEDRKQYVNTYGQGRSGAGLRRDRRFSADALAA-YAQN--RFELTGRLTLTPGL--RYEHIR------------- 407
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 443 lfntvdpitgRRVPGYYSGITQVDAAsldrkvlgayidvegqitekfqagvavRTEHYSDFgdttNGKLSLRYDFTPQIA 522
Cdd:COG4772 408 ----------RDRTDRYSTRTGGDDS---------------------------GSNSYSEF----LPGLGLLYQLTDNLQ 446
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 523 ARATASTGYRAPSLVQSGMSSFSVQvveqppgsgnyvevqqrtlranspeaqalggkALKPEESTNYSLGLVWRPLENAS 602
Cdd:COG4772 447 LYANVSRGFEPPTFGDLAYGNGGNP--------------------------------DLKPEKSWNYELGTRGRIGNGLS 494
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 603 VTVDAYRINIDNRItlsdqLPASVVTPIfagtpyaniqsAAFYTNVADTRTDGIELTGNYQWDLQRWGRLNLSSGFAKNN 682
Cdd:COG4772 495 AEVALFYIDYDNEL-----GSCSAAGGD-----------RSTFTNAGETRHQGLELALDYDLLKGGGLGLPLFAAYTYTD 558
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 683 TTITGLRDvGNIKGSQIVgrntqgliedGTPDSKLTLSANWLYENWGVTVAQRRYGEWKSlNATNPSLDQTYSPQ---WV 759
Cdd:COG4772 559 AEFTSDFG-PVFAGNRLP----------YVPRHQLTAGLGYEHGGWTANLNGRYVSEQFT-DAANTVADGSFGKIpsyTV 626
|
810 820
....*....|....*....|....*.
gi 2263446656 760 TDLDVSYTFYKGVKVSVGAINLFDTH 785
Cdd:COG4772 627 LDLSASYDFGKNLSLFAGVNNLFDKR 652
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
287-820 |
1.28e-29 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 123.34 E-value: 1.28e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 287 LTAYGFATYAHKNTDAEGFFDPPTTLRNNYGSNALARYPDGRLPITRYGLEDYAVTGGLRFENEQLGKFDLALNHGNNTL 366
Cdd:pfam00593 9 LGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRYS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 367 KSNDRNAINPSYGANSPSSIYTGKRENDQT-NLTLDWVRDFPTDLLFKPLTLSAGLAWRKENYQlsageaagwqNGPLFN 445
Cdd:pfam00593 89 SLDGDYTSNSSGLSGAGDYLSDDRLYGLYGlDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDD----------AYDPYD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 446 TVDPITGRRvpgyysgitqvdaASLDRKVLGAYIDVEGQITEKFQAGVAVRTEHYSDFGDTTNG--------------KL 511
Cdd:pfam00593 159 PANPSSSSY-------------SDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGggdnfsrsysafspRL 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 512 SLRYDFTPQIAARATASTGYRAPSLVQSGMSSfsvqvveqppgsgnyvevqqrtlRANSPEAQALGGKALKPEESTNYSL 591
Cdd:pfam00593 226 GLVYKPTDNLSLYASYSRGFRAPSLGELYGSG-----------------------SGGGGGAVAGGNPDLKPETSDNYEL 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 592 GLVWRPlENASVTVDAYRINIDNRITlsdqlpasvvtpiFAGTPYANIQSAAFYTNVADTRTDGIELTGNYqwdlQRWGR 671
Cdd:pfam00593 283 GLKYDD-GRLSLSLALFYIDIKNLIT-------------SDPDGPGLGGTVYTYTNVGKARIRGVELELSG----RLWGL 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 672 LNLSSGFAKNNTTITglrDVGNIKGSQIvgrntqglieDGTPDSKLTLSANWLYEN--WGVTVAQrRYGEWKSLNATNPS 749
Cdd:pfam00593 345 GLSGGGYTYTDADDD---ADADDTGNPL----------PNVPRHTANLGLTYDFPLggWGARLGA-RYVGSGERRYGDAA 410
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2263446656 750 LDQTYSPQWVTDLDVSYTFYKGVKVSVGAINLFDTHPDKadgaqlYGVPKYSITSPEGAQGAFYYTSVSYD 820
Cdd:pfam00593 411 NTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKR------YYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
40-315 |
1.23e-27 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 113.04 E-value: 1.23e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 40 VVVLGTRRSDlTALQSAAPVDVLSGEQLQQTGATDLSGALTALsPSFNFPQSPQGAFAGSIaqgaSLRGLASDQVLVLVN 119
Cdd:COG4206 1 VVVTATRLEQ-SKSDLTGSVTVIDAEELERSGATSLADALRRV-PGVQVSSSGGPGSAASI----SIRGLGSNQTLVLID 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 120 GKRrhssanitrqslVNGRGAAAVDLSLIPLSAIQRVEILRDGAAAQYGSDAIAGVINIVLKENDDG--GNLGYRLGGYD 197
Cdd:COG4206 75 GVP------------LNDPSLGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGfkGSVSASYGSFG 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 198 KGDG---IQRKLSGW----KGFALPNDGFLTLSFDAGSQDPASDTNPDNRIFYPGDTSVN---TPREQNNRYRTWRWGAG 267
Cdd:COG4206 143 TRRLsasLSGGAGKFsyslSASYRRSDGYRYNDPDLRNNDGYENTSLNARLGYKLGDNGSlslSGGYSDSERGYPGAVGS 222
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2263446656 268 NVSDQYNVVANSEIGIGEGLTAYGFATYAHKNTDAEGFFDPPTTLRNN 315
Cdd:COG4206 223 DRNLRLSLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGA 270
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
47-785 |
2.06e-24 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 108.81 E-value: 2.06e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 47 RSDLTALQSAAPVDVLSGEQLQQTGATDLSGALtALSPSFNFpqspqGAFAGSIAQGASLRGLaSDQVLVLVNGKRRHSS 126
Cdd:COG4774 1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADAL-RNVPGVTF-----GAGEGGNGDSFSIRGF-SASGDIYVDGLRDPGQ 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 127 ANItrqslvngrgaaavdlsliPLSAIQRVEILRDGAAAQYGSDAIAGVINIVLK--ENDDGGNLGYRLGGYDkgdgiQR 204
Cdd:COG4774 74 YRR-------------------DTFNLERVEVLKGPASVLYGRGSPGGVINLVTKrpTDEPFTEVTLTYGSDG-----QR 129
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 205 KLSGWKGFALPNDGFLTLSFDAGSQDPASDTNPDNRI-FYPGdtsvntpreqnnryrtWRWGAGnvsDQYNVVANSEIGI 283
Cdd:COG4774 130 RATLDVNGPLGDDLAYRLNGMYRDSDSYRDGVDNDRWgIAPS----------------LTWRLG---DRTRLTLDYEYQD 190
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 284 GEGLTAYGFATYAHKNtdaegffdPPTTLR-NNYGsnalarypdgrLPITRYGLEDYAVTggLRFE---NEQLgKFDLAL 359
Cdd:COG4774 191 DDRTPDYGVPAVANGR--------PVDVDRsTFYG-----------QPDDYSDSETDSAT--LRLEhdfNDNW-TLRNAL 248
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 360 NHGNNTlksNDRNAINPSYGANSPS---SIYTGKRENDQTNLTLDWVRDFPTDLLfkPLTLSAGLAWRKENYQLSAGEAA 436
Cdd:COG4774 249 RYSDYD---RDYRNTYPTGGNATGTvtrSAYRRDQDNDTLSNQTDLTGKFDTGGV--KHTLLAGVEYSREDSDNARYSGG 323
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 437 GwqNGPLFNTVDPITGRRVPGYYSGITQVDAaslDRKVLGAYIDVEGQITEKFQAGVAVRTEHY-SDFGDTTNG------ 509
Cdd:COG4774 324 G--TAPTVNLYNPVYGAPVTGPTLGGADNDS---RTDTTGLYLQDTISLTDRWSLLAGLRYDRFdTDYTDRTTGattssy 398
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 510 -------KLSLRYDFTPQIAARATASTGYRapslvqsgmssfsvqvveqpPGSGNYvevqqrtlranspeAQALGGKALK 582
Cdd:COG4774 399 ddsafspRAGLVYKPTPNLSLYASYSTSFN--------------------PGGGAP--------------SLSNAGQALD 444
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 583 PEESTNYSLGLVWRPLEN-ASVTVDAYRINIDNRITlsdqlpasvvtpifagtpyANIQSAAFYTNVADTRTDGIELTGN 661
Cdd:COG4774 445 PEKSRQYEVGVKWDLLDGrLSLTAALFRIEKTNVRT-------------------TDPANPGVYVQTGEQRSRGVELEAT 505
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 662 YQWdLQRWgrlNLSSGFAKNNTTITGLRDVGNiKGSQIVGrntqgliedgTPDSKLTLSANW--LYENWGVTVAQRRYGE 739
Cdd:COG4774 506 GEL-TPGW---SVLAGYTYLDAEITKSANAAN-VGNRLPN----------VPRHSASLWTTYdlPLPGLTLGGGVRYVGS 570
|
730 740 750 760
....*....|....*....|....*....|....*....|....*.
gi 2263446656 740 WKSLNATNPSLDqtysPQWVTDLDVSYTFYKGVKVSVGAINLFDTH 785
Cdd:COG4774 571 RYADAANTVKLP----SYTRFDAGASYRLNKNLTLRLNVNNLTDKR 612
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
37-783 |
2.37e-23 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 105.94 E-value: 2.37e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 37 LDTVVVLGTRrSDLTALQSAAPVDVLSGEQLQQTGATDLSGAL-TALSPSFNFPQSPQGafagsiaQGASLRGLASDQVL 115
Cdd:TIGR01785 1 LDTVTVTATR-TRQVLSEAPASVSVISGEQIESKQANNLADALnTVPGVDVTGGGRPPG-------QSINIRGLQDNRVL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 116 VLVNGKRRHSsanitrqslvnGRGAAAVDLSLIPLSAIQRVEILRDGAAAQYGSDAIAGVINIVLKENDD----GGNLGY 191
Cdd:TIGR01785 73 VVVDGARQNY-----------QRGGAHNGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADllrpGQLFGG 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 192 RL-GGYDKGD-GIQRKLSGWKGFALPNDGFLTLS------FDAGSQDPA--SDTNPDNRIFYPGDTSVNTPR-EQNNRYR 260
Cdd:TIGR01785 142 LAkLSYGSNNnSFGGSVAVAGRLDDNLDALVAATyrdggnYRNGNKEEAtnSAYVQKNLLAKLGWQLDDAQRlEFSYFTT 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 261 TWRWgagnvSDQYNVVANSEI--GIGEGLTAYGFATYahkNTDAEGFFDPP------TTLRNNYGSNALARYPDGRLPIT 332
Cdd:TIGR01785 222 EGSL-----DEAQNSGPGTEYvlGSSSTLLASSTRDR---SATLTYNWTPEdnpwldATASLYYNRTENDNDRSARGVGR 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 333 RYG--LEDYAVTGGLRFENEQLGKFDLALN---HGNNTLKSNDRNAINPSYGANSPSSIytgkrendqTNLTLDWVRD-F 406
Cdd:TIGR01785 294 EEGyqYTTYGATLQNTSRFDVASWSTLTYGvdwMKDKRRTESFDPNSVTTIVPNPPSAK---------EYFFGLFLQDnI 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 407 PtdLLFKPLTLSAGLawRKENYQLSageaagwqngplfntvdpitgrrvPGYYSGITQVDaasldrkvlgayidvegqit 486
Cdd:TIGR01785 365 P--LLDDRLTLSAGL--RYDHYKLS------------------------PKTTADTEAVD-------------------- 396
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 487 ekfqagvavrtEHYSDFgdttNGKLSLRYDFTPQIAARATASTGYRAPSLVQSGMSSfsvqvvEQPPGSGNYVevqqrtl 566
Cdd:TIGR01785 397 -----------RSYSRW----SPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYGTG------DHPGTPGGYT------- 448
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 567 RANSPEaqalggkaLKPEESTNYSLG------LVWRPLENASVTVDAYRINIDNRITLSdqlpASVVTPIFAGTpyANIQ 640
Cdd:TIGR01785 449 FAPNPN--------LKPETSKTWELGanlsfdNLLLDNDQLQFKVAYFYNDVKDFIDLT----IGVTDNVTAGM--NNIT 514
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 641 SaafYTNVADTRTDGIELTGNYQWDLQRWGrLNLSSGFAKNNTTITGLRDVGNIKGSQIVGRNtqgliedgTPDSKLTLS 720
Cdd:TIGR01785 515 Q---YVNIDGARIRGIEASASYDAGLWATG-LSYGYTIGKDQNTNQWLSNIPPLKLVVTVGYR--------FPDRRLDLG 582
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2263446656 721 ANWLYENwgvtvAQRRYGEWKSLnATNPSLDQtysPQW-VTDLDVSYTF--YKGVKVSVGAINLFD 783
Cdd:TIGR01785 583 AKAAYYE-----RQSESPTTEDV-AANGLLTT---PGYtVVDLYATYQPnaVKGLTVRFGVNNLTD 639
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
14-662 |
1.95e-22 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 102.79 E-value: 1.95e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 14 VLGSLAVPAFGADDNQPTAKNDhldtVVVLGTRRSDLTALQSAAPVDVLSGEQLQQTGATDLSGALTALSPSFnfPQSPQ 93
Cdd:PRK13486 5 TLASVVIPCLGFSASSIAAAED----VMIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVD--VESGT 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 94 GAFAGsiaQGASLRGLASDQVLVLVNGKRRHSSANITRQslvngrGAAAVDLSLIP-LSAIQRVEILRDGAAAQYGSDAI 172
Cdd:PRK13486 79 GKTGG---LEISIRGMPASYTLILIDGVRQGGSSDVTPN------GFSAMNTGFMPpLAAIERIEVIRGPMSTLYGSDAM 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 173 AGVINIVLKENDD----GGNLGYRLGGYDKGdGIQRKLSGWKGFALPnDGFLTLSFDAGSQD-------PASDTNpDNRI 241
Cdd:PRK13486 150 GGVVNIITRKNADkwlsSVNAGLNLQESNKW-GNSSQFNFWSSGPLV-DDSVSLQVRGSTQQrqgssvtSLSDTA-ATRI 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 242 FYPGDtsvntpreqnnryrtwrwgagnvSDQYNVVANseigigegltaygfatYAHKNTDAEGFFDPPTTLRNNYGSNal 321
Cdd:PRK13486 227 PYPTE-----------------------SQNYNLGAR----------------LDWKASEQDVLWFDMDTTRQRYDNR-- 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 322 arypDGRLPitrygledyAVTGG----LRFE-NEQLGKFDLALNHGnnTLKSNDRNAINPSYGANSPSSIYT-------G 389
Cdd:PRK13486 266 ----DGQLG---------SLTGGydrtLRYErNKISAGYDHTFTFG--TWKSYLNWNETENKGRELVRSVLKrdkwglaG 330
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 390 K-RENDQTNLTLDwvrdfptDLLFKPLtlsaglawrKENYQLSAGeaAGWQNGPLFNTVdpitgrrvpgyysgITQVDAA 468
Cdd:PRK13486 331 QpRELKESNLILN-------SLLLTPL---------GESHLVTVG--GEFQSSSMKDGV--------------VLASTGE 378
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 469 SLDRKVLGAYIDVEGQITEKFQAGVAVRTEHYSDFGDTTNGKLSLRYDFTPQIAARATASTGYRAPSLVQ--SGMSSFSV 546
Cdd:PRK13486 379 TFRQKSWSVFAEDEWHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQlhKGISGVSG 458
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 547 QvveqppGSGNyvevqqrtlranspeaqALGGKALKPEESTNYSLGLVWRPLENASVTVDAYRINIDNRItlsdqlpasv 626
Cdd:PRK13486 459 Q------GKTN-----------------LLGNPDLKPEESVSYEAGVYYDNPAGLNANVTGFMTDFSNKI---------- 505
|
650 660 670
....*....|....*....|....*....|....*.
gi 2263446656 627 vtpifagTPYANIQSAAFYTNVADTRTDGIELTGNY 662
Cdd:PRK13486 506 -------VSYSINDNTNSYVNSGKARLHGVEFAGTL 534
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
1-821 |
2.35e-22 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 102.66 E-value: 2.35e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 1 MFQRTPLA-GAIALVLGSLAVPAFGADDNqptakndhLDTVVVlgTRRSDLTALQSA-APVDVLSGEQLQQTGATDLSGA 78
Cdd:PRK10064 1 MFRLNPFVrVGLCASAISCAWPVLAVDDD--------GETMVV--TASAVEQNLKDApASISVITQEDLQRKPVQNLKDV 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 79 LTALspsfnfpQSPQGAFAGSIAQGASLRGLASDQVLVLVNGKRRHSSANITRQSlvngrgaaAVDLSLIPLSAIQRVEI 158
Cdd:PRK10064 71 LKEV-------PGVQLTNEGDNRKGVSIRGLDSSYTLILIDGKRVNSRNAVFRHN--------DFDLNWIPVDAIERIEV 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 159 LRDGAAAQYGSDAIAGVINIVLK-----------------ENDDGGNlGYRLGGYDKGDGIQRKLsGWKGFalpndGFLT 221
Cdd:PRK10064 136 VRGPMSSLYGSDALGGVVNIITKkigqkwhgtvtvdttiqEHRDRGD-TYNGQFFTSGPLIDGVL-GMKAY-----GSLA 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 222 LSFDAGSQDPA-SDTNPDNRIfyPGDTSVNtpreqNNRYRTWrwgagNVSDQYNVVAnseigigegltAYGFATYAHKNT 300
Cdd:PRK10064 209 KREKDDPQNSTtTDTGETPRI--EGFTSRD-----GNVEFAW-----TPNQNHDFTA-----------GYGFDRQDRDSD 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 301 DaegfFDPPTTLRNNYGSNALARYPDGRLPITRYgledyavtgGLRFENEqlgkfdlalNHGNNTLKSNDRNAINPSYga 380
Cdd:PRK10064 266 S----LDKNRLERQNYSLSHNGRWDYGNSELKYY---------GEKVENK---------NPGNSSPITSESNSIDGKY-- 321
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 381 nspssiytgkrendqtnlTLdwvrdfPTDLLFKPLTLsaGLAWRKENYQlsageaagwqngplfntvDPITgrrVPGYYS 460
Cdd:PRK10064 322 ------------------TL------PLTAINQFLTF--GGEWRHDKLS------------------DAVN---LTGGTS 354
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 461 GITQVDAASLdrkvlgaYIDVEGQITEKFQAGVAVRTEHYSDFGDTTNGKLSLRYDFTPQIAARATASTGYRAPSLVQsg 540
Cdd:PRK10064 355 SKTSASQYAL-------FVEDEWRIFEPLALTTGVRMDDHETYGDHWSPRAYLVYNATDTVTVKGGWATAFKAPSLLQ-- 425
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 541 mssFSVQVVEQPPGSGNYVevqqrtlrANSPEaqalggkaLKPEESTNYSLGLVWRP----LENASVTVDAYRINIDNRI 616
Cdd:PRK10064 426 ---LSPDWTSNSCRGACKI--------VGSPD--------LKPETSESWELGLYYMGeegwLEGVESSVTVFRNDVDDRI 486
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 617 TLSDQLPASVVT--PIFAG-TPYANIQSAAF--YTNVADTRTDGIELTGNY----QWDLQRwgrlnlssgfaknNTTITG 687
Cdd:PRK10064 487 SISRTSDVNAAPgyQNFVGfETNGRGRRVPVfrYYNVNKARIQGVETELKIpfndEWKLSL-------------NYTYND 553
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 688 LRDV--GNIKGSQIVGRNTQglieDGTPDSKLTLSANWLYENWGVTVAQRRYGEwkslnatnpSLDQTYSPQWVTDLDVS 765
Cdd:PRK10064 554 GRDVsnGENKPLSDLPFHTA----NGTLDWKPLALEDWSFYVSGNYTGQKRADS---------ATAKTPGGYTIWNTGAA 620
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*.
gi 2263446656 766 YTFYKGVKVSVGAINLFDTHPDKADgaqlygvpkYSITSpegaQGAFYYTSVSYDF 821
Cdd:PRK10064 621 WQVTKDVKLRAGVLNLGDKDLSRDD---------YSYNE----DGRRYFMAVDYRF 663
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
15-785 |
6.25e-22 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 101.51 E-value: 6.25e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 15 LGSLAVPAFGADDNQPTAKNDHLDTVVVLGTR---------------RSDLTALQSAAPVDVLSGEQLQQTGATDLSGAL 79
Cdd:COG4773 10 LAAAAAGALAQAAAAAAAEATTLPEVTVTGTAegtggytakssstatKLDTPLRETPQSVSVVTRQLIEDQGATTLDDAL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 80 tALSPSFNfpqspQGAFAGSIAQGASLRGLASDQVLVlvngkrrhssanitrqslvNGRGAAAVDLSLIPLSAIQRVEIL 159
Cdd:COG4773 90 -RNVPGVT-----VSSYDGGGRDSFSIRGFSIDNYLR-------------------DGLPLGGFGGGQPDTANLERVEVL 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 160 RDGAAAQYGSDAIAGVINIVLK--ENDDGGNLGYRLGGYDkgdgiqrklsgwkgfalpndgFLTLSFDAGsqDPASDtnp 237
Cdd:COG4773 145 KGPAGLLYGAGSPGGLVNLVTKrpTAEPQGEVSLSAGSWD---------------------TYRATADVG--GPLNE--- 198
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 238 DNRIFYpgdtSVNTPREQNNRYRtwrwgaGNVSDQYNVVANS-EIGIGEGLTAYGFATYAHKNTDAEGFFDPPTTLRNNY 316
Cdd:COG4773 199 DGTLRY----RLNAAYEDGDSFR------DGVDNRRTLIAPSlDWDLTDDTTLTLGAEYQDDDSTGDRGFLPLDGTLLDL 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 317 GSNalaRYPDGrlPITRYGLEDYAVTGGLRFE-NEQLgKFDLALNHGNNTLKSNDRNAINPSYGANSPSSIYTGKRENDQ 395
Cdd:COG4773 269 PRS---TNLGE--PWDYYDTETTTLFAELEHRfNDDW-SLRANARYSDSDRDGRSAYAYGAPDAATGTLTRYASARDGDS 342
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 396 TNLTLDWVRDFPTDLLFKPLTLSAGLAWRKENYQlsageaAGWQNGPLFNTVDPITGRRVPGYYSGITQvdaaSLDRKVL 475
Cdd:COG4773 343 RSDSLDANLNGKFETGGLEHTLLVGADYSRYDSD------SDSATAGTINIYNPVYGNLPEPDFDASDT----DTTTRQT 412
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 476 GAYIDVEGQITEKFQAGVAVRTEHYSDFGDTTNG-------------KLSLRYDFTPQIAARATASTGYRapslvqsgms 542
Cdd:COG4773 413 GLYAQDQISLTDRLSLLLGGRYDWYETDSTNRLGgsttsyddsaftpRAGLVYDLTPGLSLYASYSESFE---------- 482
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 543 sfsvqvveqpPGSGnyvevqqrtlranspeaQALGGKALKPEESTNYSLGLVWRPLENA-SVTVDAYRINIDNRITlsdq 621
Cdd:COG4773 483 ----------PQSG-----------------ADNNGNPLDPETGKQYEAGVKGELFDGRlNATLAVFDITQKNVAT---- 531
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 622 lpasvvtpifagtpyANIQSAAFYTNVADTRTDGIELTGNYQWdlqrWGRLNLSSGFAKNNTTITglRDVGNIKGSQIVG 701
Cdd:COG4773 532 ---------------TDPDNPNFYVQVGEVRSRGVELELSGEL----TPGLNLIAGYTYTDAKIT--KDADALEGKRLTN 590
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 702 --RNTQGL-----IEDGTPDsKLTLSAnwlyenwGVTVAQRRYGewkslNATNpslDQTYSPQWVTDLDVSYTFYKGVKV 774
Cdd:COG4773 591 vpRHTASLwttyrFPSGALK-GLGLGG-------GVRYVGERYG-----DAAN---TFTLPSYTLVDAGARYDLGKNWTL 654
|
810
....*....|.
gi 2263446656 775 SVGAINLFDTH 785
Cdd:COG4773 655 QLNVNNLFDKK 665
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
51-175 |
2.02e-20 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 86.94 E-value: 2.02e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 51 TALQSAAPVDVLSGEQLQQTGATDLSGALTALsPSFNFPQSPQGAfagsiAQGASLRGLASDQVLVLVNGKRrhssanit 130
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGV-PGVSVSSGGGGG-----GSSISIRGFGSNRVLVLVDGVP-------- 66
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 2263446656 131 rqslVNGRGAAAVDLSLIPLSAIQRVEILRDGAAAQYGSDAIAGV 175
Cdd:pfam07715 67 ----LNSGGGGSVDLNSIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
12-783 |
3.98e-19 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 92.14 E-value: 3.98e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 12 ALVLGSLAVPAFGADDNQPTAKNDHLDTVVVLGT----RRSDltalqSAAPVDVLSGEQLQQTGATDLSGALTalspsfN 87
Cdd:PRK13513 10 KAALVIAAAISSQAYAAEKTNTATPTDTMVVTASgfqqRIQD-----APASISVVTREQLENKAYRDVTDALK------D 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 88 FPqspqgafaGSIAQGA------SLRGLASDQVLVLVNGKRRHssaniTRQSLVNGRGAAAVDLSLIPLSAIQRVEILRD 161
Cdd:PRK13513 79 VP--------GVVVTGGgstsdiSIRGMAAKYTLILVDGKRVD-----TRSTRPNSDGSGIEQGWLPPLAAIERIEVVRG 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 162 GAAAQYGSDAIAGVINIvlkenddggnlgyrlggydkgdgIQRKLS-GWKGfalpndgflTLSfdagsqdpasdtnpdnr 240
Cdd:PRK13513 146 PMSSLYGSDAMGGVINI-----------------------ITRKVQkEWHG---------SLR----------------- 176
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 241 ifypGDTSVNTPREQNNRYRTWRWGAG---------NVSDQYNVVANSEI--GIGEGLTAYGFATYAHKNTDAEGF-FDP 308
Cdd:PRK13513 177 ----ADATLQEDSKSGDIFQTNAYASGplidgllglKVSGLLSHRSEDKIidGYNEQRMRNGTATFSLTPDDNNEFdFEI 252
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 309 PTTLRNNYGSNALARYPDGRLPITRYGLEDYAVTgglrfeneQLGKFDLalnhGNNTLKSNDRNAINPSYGANSPSSIYt 388
Cdd:PRK13513 253 GRYVQDRNSTPGRTLALNGTNSDTQYDRNNYAIT--------HNGYYDF----GNSTSYIQRDETRNPSRQMKSVDTIF- 319
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 389 gkreNDQTNLTLDwvrdfptdllfkPLTLSAGLAWRKENYQLSAGEAAGwqngplfntvdpitgrrvpgyYSGITQvdaa 468
Cdd:PRK13513 320 ----NTQTSFLLD------------DHTLSLGGQYRYEELYDKGNQLPS---------------------ASDLNK---- 358
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 469 sLDRKVLGAYIDVEGQITEKFQAGVAVRTEHYSDFGDTTNGKLSLRYDFTPQIAARATASTGYRAPSLVQSgmssfsvqv 548
Cdd:PRK13513 359 -LTRWSWALFAEDEWQMTNDFALTGGIRMDQDQNYGTHWTPRLYGVWHLADQWTLKGGVSTGYRSPDLRQA--------- 428
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 549 veqppgSGNYvevQQRTLRANSPeAQALGGKALKPEESTNYSLGLVWRPLENASVTVDAYRINIDNRITLSDQLPASVVT 628
Cdd:PRK13513 429 ------TDNW---GQLTGGGGLP-ALILGNSDLKPEKSISQEIGILWDNQENLNASVTLFNTDFKDKITEVRNCDTTNTD 498
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 629 P--IFAGTPYANIQSAafyTNVADTRTDGIELTGNyqWDLQRwgRLNLSSgfakNNTTITGLRDVGNIKGSQIvgrntqg 706
Cdd:PRK13513 499 GqcVFNGINYDFISDR---INVDKANMRGVEATFN--WDINQ--AWSLAT----NYTFTQSEQKSGAFAGQPL------- 560
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 707 lieDGTPDSKLTLSANWlyenwgvtVAQRRYGEWKSLNATNPSLD-------QTYSPQWV-TDLDVSYTFYKGVKVSVGA 778
Cdd:PRK13513 561 ---NQMPKHMANATLNW--------QTTEDFATWIRINYRGKTSEylnrtsmGSGTPSYTfVDLGASYQLTKELRLMGGV 629
|
....*
gi 2263446656 779 INLFD 783
Cdd:PRK13513 630 YNLLD 634
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
1-783 |
2.03e-18 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 90.22 E-value: 2.03e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 1 MFQRTPLAGAIALVLGSLAvPAFGADdnqptAKNDHLDTVVVlgTRRSDLTALQSA-APVDVLSGEQLQQTGATDLSGAL 79
Cdd:PRK13483 3 KYLAQVISALCLLPAVFVT-HALAQA-----APDKTMETVVV--TASGYEQQIRDApASISVITREDLENRFYRDLTDAL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 80 TALsPSFNFPqspqgafAGSIAQGASLRGLASDQVLVLVNGKRRHSsanitRQSLVNGRGAAAVDLSLIPLSAIQRVEIL 159
Cdd:PRK13483 75 LDV-PGVVVT-------GGGDRTDISLRGMGSQYTLILVDGKRQSS-----RETRPNSDGPGVEQAWTPPLAAIERIEVI 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 160 RDGAAAQYGSDAIAGVINIvlkenddggnlgyrlggydkgdgIQRKlsgwkgfaLPNDgfltlsfdagsqdpasdtnpdn 239
Cdd:PRK13483 142 RGPMSSLYGSDAIGGVINI-----------------------ITRK--------VPNE---------------------- 168
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 240 rifYPGDTSVNTPREQNNRyrtwrwgAGNVSDQYNVVANSEIGIGEGLTAYGfaTYAHKNTD--AEGFFDPpttlRNNYG 317
Cdd:PRK13483 169 ---WQGEVRLDTTLQENSD-------SGNVYQANFFVNGPLIKDLLGLQLYG--QYTQREEDdiEGGYRDK----DARSL 232
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 318 SNALARYPDGRLPITrygLEdyaVTGGLRFENEQLGKFDLALNHGN---------NTLKSNDRNAINPSYG-----ANSP 383
Cdd:PRK13483 233 TAKLALTPNEDHDIM---LE---VGTSNQERDSTVGKTVAPLAPGEscgrrgcpeSSTTEYERSTVSLSHTgrwdfGTSD 306
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 384 SSIYTGKRENDQTNLTLDWVrDFPTdllfkplTLSAGLAwrkENYQLSAGEAAGWQNgplfntVDPITGRRVpgyySGIT 463
Cdd:PRK13483 307 TYIQHEEFDNKSREMKIKNT-DFQS-------SLVAPLG---QEHTLTFGAAYNHQD------LTDETSNQI----SDLT 365
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 464 QVdaaslDRKVLGAYIDVEGQITEKFQAGVAVRTEHYSDFGDTTNGKLSLRYDFTPQIAARATASTGYRAPSLVQsgmss 543
Cdd:PRK13483 366 DI-----SRTQWAVFSEDEWRIADDFALTGGLRLDHDENFGGHVSPRVYGVWNLAPSWTVKGGVSTGFRAPSLRQ----- 435
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 544 fSVQVVEQPPGSGNyvevqqrtlranspeaqALGGKALKPEESTNYSLGLVWRPLENASVTVDAYRINIDNRITLSDqLP 623
Cdd:PRK13483 436 -TTPDWGQVSRGGN-----------------IYGNPDLKPETSLNKELGLYYDLGSGLTASLTVFYNEFKDKITRVA-CP 496
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 624 ASVVTpifAGtPYANIQSAAFYTNVADTRTDGIELTGNYQwdlqrwgrlnLSSGFA-KNNTTITglrdvgniKGSQIVGr 702
Cdd:PRK13483 497 ATQCT---DG-PNQFGADPTTYVNIDEAVTQGVEASLSYP----------ITSTLSlSGNYTYT--------DSEQKSG- 553
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 703 NTQGLIEDGTPDSKLTLSANW-LYENWGvTVAQRRYGEWKSLNATNPSLDQTYSPQWVT-DLDVSYTFYKGVKVSVGAIN 780
Cdd:PRK13483 554 AYKGSPLNQLPKHLFQASLNWePTDRLN-SWARVNYRGEESQPTTGPSSSSFIAPSYTFlDLGANYQLTDNLKLSAGIYN 632
|
...
gi 2263446656 781 LFD 783
Cdd:PRK13483 633 LFD 635
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
14-206 |
4.48e-16 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 82.35 E-value: 4.48e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 14 VLGSLAVPAFGA---DDNQptakndhlDTVVVLGTR----RSdlTALqsaAPVDVLSGEQLQQTGATDLSGALTALsPSF 86
Cdd:PRK10641 7 LLTALSVTAFSGwaqDTSP--------DTLVVTANRfqqpVS--TVL---APTTVVTRDDIDRWQSKSVNDVLRRL-PGV 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 87 NFPQSpqgafaGSIAQGASL--RGLASDQVLVLVNGKRRhSSANITrqslvngrgaAAVDLSLIPLSAIQRVEILRDGAA 164
Cdd:PRK10641 73 DIAQN------GGLGQLSSLfiRGTNSSHVLVLIDGVRL-NQAGIS----------GSADLSQIPISLVQRIEYIRGPRS 135
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2263446656 165 AQYGSDAIAGVINIVLKENDDGGNLGYRLG--GYDKGDG-IQRKL 206
Cdd:PRK10641 136 AVYGSDAIGGVVNIITTRDKPGTTLSAGWGsnGYQNYDGsTQQQL 180
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
5-821 |
1.88e-15 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 80.84 E-value: 1.88e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 5 TPLAGAIALVLGSLAVPAFGADDNQPTAKNDHLDTVVVLGTRRsdltALQsAAPVDVLSGEQLQQTG-ATDLSGALTALs 83
Cdd:PRK13524 6 HSLALLVNLGIYGVAQAAEAEDAKTDDTPASHEDTIVVTAAEQ----NLQ-APGVSTITAEDIRKRPpANDVSEIIRTM- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 84 PSFNFpqspqgafAGSIAQGA-------SLRGLASDQVLVLVNGKRRhSSANITRQ---SLVNGRGaaavDLSLIPLSAI 153
Cdd:PRK13524 80 PGVNL--------TGNSTSGQrgnnrqiDIRGMGPENTLILIDGKPV-SSRNSVRYgwrGERDTRG----DTNWVPPEMI 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 154 QRVEILRDGAAAQYGSDAIAGVINIVLKENDD--------------------------------GGNLGYRL-GGYDKGD 200
Cdd:PRK13524 147 ERIEVLRGPAAARYGNGAAGGVVNIITKKPTGewhgswntyfnapehkaegatkrtnfslsgplGDELSFRLyGNLNKTQ 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 201 GIQRKLSgwKGFALPNDGFLTLSFDAG---------SQDPASDTNPDNRIFYPGDTSvntprEQNNRYrtwrwgAGnvsD 271
Cdd:PRK13524 227 ADAWDIN--QGHQSARTGSYAGTLPAGregvinkdiNGLLRWDFAPLQSLELEAGYS-----RQGNLY------AG---D 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 272 QYNVVANseigigegltaygfatyahkntdaegffdppTTLRNNYG--SNALARYpdgrlpitrygleDYAVTgglrfen 349
Cdd:PRK13524 291 TQNTNSD-------------------------------ALVKSLYGkeTNRMYRQ-------------NYALT------- 319
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 350 eQLGKFDLALNHGNNTLKSNDRNAINPSYGANSPSSIYTGKRENDQT----NLTLDWVRDFPTDLLFkPLTLSAGLAWRK 425
Cdd:PRK13524 320 -HRGGWDNGVSTSNYAQYEHTRNSRLPEGLAGGTEGIFNEKATQFSTidldDVMLHSEVNLPFDLLV-NQTLTLGTEWNQ 397
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 426 ENYqlsageaagwqNGPLFNTVDPITGRRVPGYYSGitqVDAASLDRKVLGAYIDVEGQITEKFQAGVAVRTEHYSDFGD 505
Cdd:PRK13524 398 QRM-----------KDPSSNTQALTSGGAIPGVSAT---GRSPYSKAEIFSLFAEDNMELTDSTMLTPGLRFDHHSIVGN 463
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 506 TTNGKLSLRYDFTPQIAARATASTGYRAPSLVQSG----MSSfsvqvveqpPGSGNYvevqqrtlrANSPEA-QALGGKA 580
Cdd:PRK13524 464 NWSPSLNLSQGLGDDFTLKMGIARAYKAPNLYQTNpnyiLYS---------KGQGCY---------ASAGNGcYLQGNDD 525
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 581 LKPEESTNYSLGLVW-RPLENASVTVdaYRINIDNRITlsdqlPASVVTPIFAGTPYANIQsaafYTNVADTRTDGIE-- 657
Cdd:PRK13524 526 LKAETSVNKEIGLEFkRDGWLAGLTW--FRNDYRNKIE-----AGYVPVGTNSVGKTDIYQ----WENVPKAVVEGLEgt 594
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 658 ----LTGNYQWdlqrwgrlnlssgfaknNTTITGLRDVGNikgsqivgrNTQGLIEDGTPDSKLTLSANW-LYENWGVTV 732
Cdd:PRK13524 595 lnvpVSETVNW-----------------TNNLTYMLQSKN---------KTTGDPLSIIPEYTLNSTLSWqATEDLSLQS 648
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 733 AQRRYGEWKS------LNATNPSLDQTYSPQWVTDLDVSYTFYKGVKVSVGAINLFDTHPDKADGAQ-----LYGVPKYS 801
Cdd:PRK13524 649 TFTWYGKQKPkkynykGQPVTGSATKEVSPYSIVGLSATYDVTKNVSLTGGVDNLFDKRLWREGNAQttgdlIAGAGAYT 728
|
890 900
....*....|....*....|
gi 2263446656 802 ITSPegaqGAFYYTSVSYDF 821
Cdd:PRK13524 729 YNEP----GRTYYMSLNTHF 744
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
31-181 |
1.73e-14 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 77.35 E-value: 1.73e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 31 TAKNDHLDTVVVLGtrrSDLTALQSAAP--VDVLSGEQLQQTGATDLSGALTALSP-SFNfpqspqgafAGSIAQGASLR 107
Cdd:PRK13484 24 ASSDKKEDTLVVTA---SGFTQQLRNAPasVSVITSEQLQKKPVSDLVDAVKDVEGiSIT---------GGNEKPDISIR 91
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2263446656 108 GLASDQVLVLVNGKRRHSsanitRQSLVNGRGAAAVDLsLIPLSAIQRVEILRDGAAAQYGSDAIAGVINIVLK 181
Cdd:PRK13484 92 GLSGDYTLILVDGRRQSG-----RESRPNGSGGFEAGF-IPPVEAIERIEVIRGPMSSLYGSDAIGGVINIITK 159
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
3-821 |
2.63e-13 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 73.64 E-value: 2.63e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 3 QRTPLAGAIALVLGSLAVPAFGADDnqpTAKNDHLDTVVVLGTRRSdltALQSAAPVDVLSGEQLQQTGAT-DLSGALTA 81
Cdd:PRK13528 3 MRVNKILWLLTVLLVGLNSPVSAAE---SSDDDNGETMVVEATAEQ---ELKQQPGVSIITAEDIKKRPPVnDLSDIIRK 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 82 LsPSFNFpqspqgafAGSIAQGA-------SLRGLASDQVLVLVNGKRRhSSANITRQSLvNGRGAAAVDLSLIPLSAIQ 154
Cdd:PRK13528 77 M-PGVNL--------TGNSASGTrgnnrqiDIRGMGPENTLILIDGVPV-TSRNSVRYSW-RGERDTRGDTNWVPPEMVE 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 155 RVEILRDGAAAQYGSDAIAGVINIVLK-----------------ENDDGGN---LGYRLGGYDKGDGIQRKLSGwkgfal 214
Cdd:PRK13528 146 RIEVIRGPAAARYGSGAAGGVVNIITKrptndwhgslslytnqpESSKEGAtrrANFSLSGPLAGDALTMRLYG------ 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 215 pndgfltlsfdagsqdPASDTNPDNR-IFYPGDTSVNTPRE--QN---NRYRTWRWGAGNV-------SDQYNVVA---- 277
Cdd:PRK13528 220 ----------------NLNKTDADSWdINSSAGTKNAAGREgvRNkdiNGVLSWKMTPQQIldfeagySRQGNIYAgdtq 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 278 -NSEIGIGEGLTAYGFATYAHKntdaegffdppttlRNNYGsnalarypdgrlpITRYGLEDYAVTgglrfeneqlgKFD 356
Cdd:PRK13528 284 nSNSSAVTESLAKSGKETNRLY--------------RQNYG-------------LTHNGIWDWGQS-----------RLG 325
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 357 LALNHGNNT-----LKSNDRNAINPsyGANSPSSIYTGKRENDQTNLTLDWVRDfptdllfkpLTLSAGLAWRKEnyQLs 431
Cdd:PRK13528 326 FYYEKTNNTrmnegLAGGGEGRITA--DQTFTTSRLESYRTSGELNVPLNWLFE---------QTLTVGAEWNRD--EL- 391
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 432 ageaagwqNGPlFNTVDPITGRRVPGyysgiTQVDAASLDRK----VLGAYIDVEGQITEKFQAGVAVRTEHYSDFGDTT 507
Cdd:PRK13528 392 --------NDP-SSTSLTVKDGDIGG-----ISGSAADRSSKnkseISALYVEDNIEPVPGTNLIPGLRFDYHSEFGSNW 457
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 508 NGKLSLRYDFTPQIAARATASTGYRAPSLVQSGmssfsvqvveqpPGSGNYVEVQQRTLRANSPEAQALGGKALKPEEST 587
Cdd:PRK13528 458 SPSLNLSQELGDYFKVKAGIARAFKAPNLYQSS------------EGYLLYSRGNGCPKDITSGGCYLVGNKNLDPEISV 525
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 588 NYSLGLVWRPLE-NASVTVdaYRINIDNRITLSDqlpasvvTPIFAGTPYANIQSaafYTNVADTRTDGIEltGNYQWDL 666
Cdd:PRK13528 526 NKEIGLEFTVDDyHASVTY--FRNDYQNKIVAGD-------DVIGRTASGAYILQ---WQNGGKAVVEGLE--GNLLVPL 591
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 667 QRwGRLNLSSGF-----AKNnttitglRDVGNikGSQIVGRNTQGLIEDGTPDSKLTLSANWLYenWGVTvAQRRYGEWK 741
Cdd:PRK13528 592 MK-DRLNWNTNAtymitSEQ-------KDTGN--PLSVIPKYTINSTLDWQITQALSANVNWTL--YGKQ-KPRTHAESR 658
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 742 SLNATNPSLDQ--TYSpqwVTDLDVSYTFYKGVKVSVGAINLFDTHPDK-ADGAQLYGVPkysitspegaqGAFYYTSVS 818
Cdd:PRK13528 659 SEETGGLSGKElgAYS---LVGVNVNYDINKNLRLNVGVSNLFDKQIYReGEGANTYNEP-----------GRAYYAGVT 724
|
...
gi 2263446656 819 YDF 821
Cdd:PRK13528 725 ASF 727
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
59-783 |
3.19e-12 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 70.13 E-value: 3.19e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 59 VDVLSGEQLQQTGATDLSGALTALSPSFNfpqspQGAFAGSIAQGASLRGLasdQVLVLVNGKRRHSSanitrqslvngR 138
Cdd:TIGR01783 6 VSVITRQELEDQQAGSLSEALQRVPGVVV-----GGSGGTTQFGNITIRGF---GLEVDIDNVYLDGV-----------P 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 139 GAAAVDLSLIPLSAIQRVEILRDGAAAQYGSDAIAGVINIVLK--------------ENDDG--------------GNLG 190
Cdd:TIGR01783 67 LLSRGNLAIVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKrpqdepkgsvtfgaGTRSGyrtafdlggplgadGTFR 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 191 YRL-GGYDKGDGI-----QRKLSGWKGFALPNDGFLTLSFDAGSQDpaSDTNPDNRIFYPGDTSVNTPREQNNRYRTWRW 264
Cdd:TIGR01783 147 GRLnGARQDGDSFydgagEETRLGATATDWQLDDRTLLRLGAYYQK--ERDRGGYGGLPASGGTSGRDLSSDRYLGTSSN 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 265 GAGNVSDQYNVVANSEIGIGEGLTAYGFATYAHKNTDAEgffdppttlrNNYGSNALA--RYPDGRLPITRYGLEDYAVT 342
Cdd:TIGR01783 225 RNYDDREYLSYGLSLEYQFNDVWTGKQNLRYSYFDTDSN----------QVQASGYSSdgGLFGRSLTVVNVKQDRVQID 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 343 GGLRFEneqlgkFDL-ALNH-----GNNTLKSNDRNAINPSYGANSPSSIYTGKRENDQTNLTLDWVRDFPTDllfkplT 416
Cdd:TIGR01783 295 AGLDGE------FETgPIEHdlllgVSYGQRTTNRFNNTGYPSDNIYSLTATSSARTDIGDSPKDRALSSTTK------A 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 417 LSAGLAWRKEnyqlsageaagwQNGPLFNTVdpiTGRRvpgyysgitqvdaasldrkvlgayidveGQITEKFQAGVAVR 496
Cdd:TIGR01783 363 LNGVALQRIL------------LADKWTLTL---GGRY----------------------------DSVDVKSNNGVAGS 399
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 497 TEHYSDFgdTTNGKLSLRYDFTPQIAARATASTGYRAPSLVQSGmssfsvqvveqppgsgnyvevqqrtlranspeaQAL 576
Cdd:TIGR01783 400 TGKRDDS--QFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKG---------------------------------AGN 444
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 577 GGKALKPEESTNYSLGLVWRPLENASVTVDAYRINIDNRITlsdQLPASVVtpifagtpyaniqsaaFYTNVADTRTDGI 656
Cdd:TIGR01783 445 SGDILEPEKGKNYELGVRYDLGDSLLATAALFRITKDNQLV---QDPVNGT----------------FSVNAGKTRNRGV 505
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 657 ELTGNYQWDLQrwgrLNLSSGFAKNNTTITglrDVGNIkgsqivgrNTQGLIEDGTPDSKLTLSANWLYENWgvtvaQRR 736
Cdd:TIGR01783 506 ELEARGYLTPG----LSLSAGYTYTDAEFT---EDTNG--------DTQGNTVPFVPKHTASLWASYAPPVG-----DNG 565
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....
gi 2263446656 737 YGEWKSLNAT---NPSLDQTY--SPQWVTDLDVSYTFY--KGVKVSVGAINLFD 783
Cdd:TIGR01783 566 LTLGGGVQYTgkaYVDGGNTGkvPSYTVVDLSVRYDLTkkKNLTLALNVNNLFD 619
|
|
| OMP_b-brl_3 |
pfam14905 |
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ... |
581-785 |
4.34e-03 |
|
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.
Pssm-ID: 434300 [Multi-domain] Cd Length: 407 Bit Score: 40.33 E-value: 4.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 581 LKPEESTNYSLGLVWRplENASVTVDAYRINIDNRITLSdqlpasvvtpifagTPYANIQSAAFYTNVADTRTDGIELTG 660
Cdd:pfam14905 212 LKPEYTNSFELGYTYK--WKLSLSLSYRYTNDVIQQTFI--------------TDDNDNVTYTTYENLGKSNSYGLELSA 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 661 NYQwdLQRWGRLNLSSGFAKNNTTITGLRDVG-NIKGSQIVGRNTQgliedgTPDSKLTLSANWLYenwgvtvaqrryge 739
Cdd:pfam14905 276 SFN--PTKWWSLNGNLNGYYNKYKIDGSLNSDfSNFGFNWNLNNTF------TLPKGWSLQLNGNY-------------- 333
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2263446656 740 wkslNATNPSLDQTYSPQWVTDLDVSYTFYKG-VKVSVGAINLFDTH 785
Cdd:pfam14905 334 ----RSPRVTGQGKIKPFYSLDLGLSKSFLKKkLTLSLNVNDIFNTR 376
|
|
| OMP_RagA_SusC |
TIGR04056 |
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade ... |
37-176 |
5.13e-03 |
|
TonB-linked outer membrane protein, SusC/RagA family; This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 274948 [Multi-domain] Cd Length: 981 Bit Score: 40.65 E-value: 5.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2263446656 37 LDTVVVLGT---RRSDLTALQSaapvdVLSGEQLQQTGATDLSGALtalspsfnfpqspQGAFAGSIAQGAS-------- 105
Cdd:TIGR04056 78 LDEVVVVGYgtqKKKSLTGAVS-----TVKAKELKKVPVSNLSNAL-------------QGKVAGVIITQSSgepggdae 139
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2263446656 106 --LRGL----ASDQVLVLVNGkrrhssanITRQSlvngrgaaavDLSLIPLSAIQRVEILRDGAA-AQYGSDAIAGVI 176
Cdd:TIGR04056 140 iwIRGIssfgGNNSPLYVIDG--------VPRDN----------GLSDLNPEDIESISVLKDASAtAIYGSRGANGVI 199
|
|
| |
