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Conserved domains on  [gi|2260905528|ref|WP_252690909|]
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MULTISPECIES: DUF3306 domain-containing protein [Ralstonia]

Protein Classification

DUF3306 domain-containing protein( domain architecture ID 12111305)

DUF3306 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3306 pfam11748
Protein of unknown function (DUF3306); This family of proteobacterial species proteins has no ...
 6-112 7.99e-29

Protein of unknown function (DUF3306); This family of proteobacterial species proteins has no known function.


:

Pssm-ID: 432046  Cd Length: 120  Bit Score: 103.68  E-value: 7.99e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260905528   6 FLSRWSRRKAAERRGEPEPETAPPAEPAPAVVPEV------------SPPEPTPEAPPPLTLEDAAKLTPSDDFAPFVAH 73
Cdd:pfam11748   2 FLSRWSRRKLEARPAEAPEPAQSPELADDEEEAAEaeaaveaaapaaAAAADAEAEEPLPTLPDVEALTAESDFARFLRK 81

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2260905528  74 GVDETVKRAALKKLFADPHFNVMDGLDTYIDDYSQPDPI 112
Cdd:pfam11748  82 GVPEALRRAALRKLFSDPHFNVMDGLDEYADDYSNPDPL 120
 
Name Accession Description Interval E-value
DUF3306 pfam11748
Protein of unknown function (DUF3306); This family of proteobacterial species proteins has no ...
 6-112 7.99e-29

Protein of unknown function (DUF3306); This family of proteobacterial species proteins has no known function.


Pssm-ID: 432046  Cd Length: 120  Bit Score: 103.68  E-value: 7.99e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260905528   6 FLSRWSRRKAAERRGEPEPETAPPAEPAPAVVPEV------------SPPEPTPEAPPPLTLEDAAKLTPSDDFAPFVAH 73
Cdd:pfam11748   2 FLSRWSRRKLEARPAEAPEPAQSPELADDEEEAAEaeaaveaaapaaAAAADAEAEEPLPTLPDVEALTAESDFARFLRK 81

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2260905528  74 GVDETVKRAALKKLFADPHFNVMDGLDTYIDDYSQPDPI 112
Cdd:pfam11748  82 GVPEALRRAALRKLFSDPHFNVMDGLDEYADDYSNPDPL 120
 
Name Accession Description Interval E-value
DUF3306 pfam11748
Protein of unknown function (DUF3306); This family of proteobacterial species proteins has no ...
 6-112 7.99e-29

Protein of unknown function (DUF3306); This family of proteobacterial species proteins has no known function.


Pssm-ID: 432046  Cd Length: 120  Bit Score: 103.68  E-value: 7.99e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2260905528   6 FLSRWSRRKAAERRGEPEPETAPPAEPAPAVVPEV------------SPPEPTPEAPPPLTLEDAAKLTPSDDFAPFVAH 73
Cdd:pfam11748   2 FLSRWSRRKLEARPAEAPEPAQSPELADDEEEAAEaeaaveaaapaaAAAADAEAEEPLPTLPDVEALTAESDFARFLRK 81

                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 2260905528  74 GVDETVKRAALKKLFADPHFNVMDGLDTYIDDYSQPDPI 112
Cdd:pfam11748  82 GVPEALRRAALRKLFSDPHFNVMDGLDEYADDYSNPDPL 120
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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