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Conserved domains on  [gi|2245374867|ref|WP_249941764|]
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autotransporter outer membrane beta-barrel domain-containing protein [Escherichia coli]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
autotrans_barl TIGR01414
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, ...
1324-1769 1.60e-67

outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]


:

Pssm-ID: 273608 [Multi-domain]  Cd Length: 431  Bit Score: 235.36  E-value: 1.60e-67
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1324 DGSASSDVYLDKDYVAHdgSGVQFGIFGQ---KEADVMHVKGDTSGSSGIVVTTNSKNKIKKGGDILLVEVNGDSSGSFY 1400
Cdd:TIGR01414    1 PGGAFNTLTVNGLYTGN--GGFVMNTDLGgdnSQTDRLVVNGNASGTTGVVVNNIGGEGAQTGDGITLVTVNGGSDAAFT 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1401 LNslikngkeykvtGDYIDVGAWEYALNK----KRKNWYLSVD--------------MRPEPGAFINNSKSMLDMFALQR 1462
Cdd:TIGR01414   79 LA------------NGKVDAGAYTYTLYKngteDNNNWYLTSSlpdltppgqqlsptYRAEAGSYAANANAALFLAELDT 146
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1463 YDIPGQHRYPTLFENlyNNGMWIQINNNSGSNSEVYDNLKTSYSLNTMMIGGDIYNWTDGYNYSHIGIMGGMGSAANKTT 1542
Cdd:TIGR01414  147 LRQRMGDLRSAARDA--GNGVWARIFGGDNHLDGDAGAAGYDQNTTGVQLGGDILLAGNADGDLHVGLMAGYAKADIKTR 224
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1543 StNNKRATGNVDGYTLGLYHVFQQNisdglneserQGLWTYSSIQYMDYDNSVSSTNNF---KADYGVNGFRLTGEVGYL 1619
Cdd:TIGR01414  225 S-YKYGGKGKVDGYGLGLYGTWLQD----------SGAYVDGVLQYSRFRNDVSSTGSNgkvSGKYNSNGFTASLEAGYR 293
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1620 KNIGGiqpSDFYVEPKLYLSHTELSGGVVEDLQGGKITYPN-SLTIIEPGVFFSYrkthESTSNDEAMFKDYIKQSVVDV 1698
Cdd:TIGR01414  294 YNLGG---NGWYVEPQAQLSYFGVSGDDYKESNGTRVLGGGgDSLQGRLGLRVGY----QFDLGTGRAVKPYLKANVLHE 366
                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2245374867 1699 wFGGGYSFKT-GNYSRTNFDSDMVEYNTSDNFVLKSgvEFEFLKDARLLLSSsysiNNDRNLSFILGGNYYF 1769
Cdd:TIGR01414  367 -FKGGTGVRVnGVTIRNDFSGTRAEYGVGVNAKIKD--NLSLYADVDYQKGG----KKYTDNQGNLGVRYSF 431
AidA super family cl34620
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
879-1645 1.93e-24

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


The actual alignment was detected with superfamily member COG3468:

Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 111.58  E-value: 1.93e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  879 TGNGATISSGNTFTVAKGNNASATLDYSDSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIGKGSSTIANVSVGAGS 958
Cdd:COG3468      5 GGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGT 84
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  959 NMLIKGNASIGVGDQAKAKFSVKDSVLNIGGSLVLGQGNSTEAEMSVEHSQLYSGGLLLGTANNAVVSMSANNSEISVVG 1038
Cdd:COG3468     85 GGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSG 164
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1039 DYTVAKGDGSEATLIYKNSDINLGNGILGAGSGVKTDLSLDNSKFVASDGIIIGKGDNAITNLSISDHSVFKGERINIGN 1118
Cdd:COG3468    165 GGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGS 244
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1119 GAYSKNSISITGNSIFDFGSSQESTIGEGDYSQSLVTINDASVYGDGSLTLAKGNNSFAVLNLQDNAVTNANNISLATGL 1198
Cdd:COG3468    245 AGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGG 324
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1199 GSKAIVNVSNMNSGQFNPVSMGAGDGYAEVNFDGVNGYTLSTNFIcmdSGSCADTVINVNRGTVSLSGTNDWKGQINVYD 1278
Cdd:COG3468    325 GSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGG---GGGSGGGGGAGGGGANTGSDGVGTGLTTGGTG 401
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1279 GTRLDARGNDAVDGILNVSKEAQVDFNgysqhMTGidNKGMIYLsdgsassDVYLDKDYVAHDGsgvqfgifgqkeadvM 1358
Cdd:COG3468    402 NNGGGGVGGGGGGGLTLTGGTLTVNGN-----YTG--NNGTLVL-------NTVLGDDNSPTDR---------------L 452
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1359 HVKGDTSGSSGIVVTTNSKNKIKKGGDILLVEVNGDSSGSFYLnslikngkeykvtGDYIDVGAWEYALNKKR-----KN 1433
Cdd:COG3468    453 VVNGNTSGTTGVRVNNAGGLGAQTVNGIEVVEVNGASDGAFTL-------------GGRVVAGAYEYTLYQGGsggddGN 519
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1434 WYLS----------VDMRPEPGAFINNSKSMLDMFALQRYDIPGQHRYPTLFENLYNNGMWIQINNNSGSNSEVYDNLKT 1503
Cdd:COG3468    520 WYLRstltppdpptPVYRPEVPSYLANPAAANGLFELGTLHDRLGERRYTDTGESDNSGAWLRVEGGHNRSRDSSGQLDY 599
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1504 SYSLNTMMIGGDIYNWTDGYNYSHIGIMGGMGSAANKTTSTNNKRATGNVDGYTLGLYHVFQQNisdglneserQGLWTY 1583
Cdd:COG3468    600 DSNRYGLQLGGDLLQWEDGGGRLHVGVMAGYGNGDSDVRSRATGTGKGDVDGYSLGLYGTWYGN----------NGFYVD 669
                          730       740       750       760       770       780
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2245374867 1584 SSIQYMDYDNSVSSTNNFKADYGVNGFRLTG--EVGYLKNIGgiqpSDFYVEPKLYLSHTELSG 1645
Cdd:COG3468    670 GVLQYSWFDNDVSSDDLGGVTGSYDGNGYSAslEAGYPFKLG----EGWSLEPQAQLIYQGVDF 729
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
25-1422 3.07e-20

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


:

Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 98.69  E-value: 3.07e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867   25 NIDGNTTISDRNISGSLNIGINKNANVDINGTVNIKDYFSVATCNGQSSTCPAGGLNASANINNSATVGASVTIVGDSSK 104
Cdd:COG3210    176 SIPTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAA 255
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  105 GELNIDGGSTLYTQQLWVSGNDNDKTSNVSDDSNGSLKINNGSNVFVVSSQDDTPFKTNPVKWNQNIISQGNNITDGTVS 184
Cdd:COG3210    256 GAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNT 335
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  185 SGDLVLGKTGNGIIDIDNNSKLDVKNDVVVSTGVDGIPNEKPSVINIKNGSNFLIHGDMKGGISAAGQLELNMDNSSNLR 264
Cdd:COG3210    336 TANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIA 415
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  265 VDKSIAVGIGSKSNISVSAASGSSISSTGDFTVATGNNSNAKLELDASNLSVNGVSTIGSGDGSITKFDIKNGSVVTSIS 344
Cdd:COG3210    416 GNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTT 495
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  345 DMTLAKGKGTQANINISSSQLNTGSLSVGEGDNADVTMTGSGASVSSKNTFTVAKGNNASAKLNYTDSTINIGSGYIGEG 424
Cdd:COG3210    496 NATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGG 575
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  425 ESAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGSSASVDVKVTNAVLSADSLSLGGGEAAKV 504
Cdd:COG3210    576 TSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTAS 655
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  505 TMTGSGATVNSKNTFTVAKGNNASATLDYTDSKIDIGSGYIGEGEAAKTQLELNNSALTASGKV--FIGQGNTTQTNLTL 582
Cdd:COG3210    656 ANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIgaLANANGDTVTFGNL 735
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  583 NDKSSVNVSGEMSVAQGNS---------------ASVDVKVTNAVLSADSLSLGGGEAAKVTMTGNRATISSGNTFTVAK 647
Cdd:COG3210    736 GTGATLTLNAGVTITSGNAgtlsigltanttasgTTLTLANANGNTSAGATLDNAGAEISIDITADGTITAAGTTAINVT 815
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  648 GNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAAS 727
Cdd:COG3210    816 GSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGT 895
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  728 AKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKD 807
Cdd:COG3210    896 LTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSS 975
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  808 SALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISS 887
Cdd:COG3210    976 AVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISG 1055
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  888 GNTFTVAKGNNASATLDYSDSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIG--KGSSTIANVSVGAGSNMLIKGN 965
Cdd:COG3210   1056 GNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTstGGVTASKVGGTTTVGATGTSTA 1135
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  966 ASIGVGDQAKAKFSVKDSVLNIGGSLVLGQGNSTEAEMSVEHSQLYSGGLLLGTANNAVVSMSANNSEISVVGDYTVAKG 1045
Cdd:COG3210   1136 STEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTN 1215
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1046 DGSEATLIYKNSDINLGNGILGAGSGVKTDLSLDNSKFVASDGIIIGKGDNAITNLSISDHSVFKGERINIGNGAYSKNS 1125
Cdd:COG3210   1216 VTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATS 1295
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1126 ISITGNSIFDFGSSQESTIGEGDYSQSLVTINDASVYGDGSLTLAKGNNSFAVLNLQDNAVTNANNISLATGLGSKAIVN 1205
Cdd:COG3210   1296 AGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLA 1375
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1206 VSNMNSGQFNPVSMGAGDGYAEVNFDGVNGYTLSTNFICMDSGSCADTVINVNRGTVSLSGTNDWKGQINVYDGTRLDAR 1285
Cdd:COG3210   1376 ATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADA 1455
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1286 GNDAVDGILNVSKEAQVDFNGYSQHMTGIDNKGMIYLSDGSASSDVYLDKDYVAHDGSGVQFGIFGQKEADVMHVKGDTS 1365
Cdd:COG3210   1456 SAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSS 1535
                         1370      1380      1390      1400      1410
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 2245374867 1366 GSSGIVVTTNSKNKIKKGGDILLVEVNGDSSGSFYLNSLIKNGKEYKVTGDYIDVGA 1422
Cdd:COG3210   1536 VAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAG 1592
 
Name Accession Description Interval E-value
autotrans_barl TIGR01414
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, ...
1324-1769 1.60e-67

outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]


Pssm-ID: 273608 [Multi-domain]  Cd Length: 431  Bit Score: 235.36  E-value: 1.60e-67
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1324 DGSASSDVYLDKDYVAHdgSGVQFGIFGQ---KEADVMHVKGDTSGSSGIVVTTNSKNKIKKGGDILLVEVNGDSSGSFY 1400
Cdd:TIGR01414    1 PGGAFNTLTVNGLYTGN--GGFVMNTDLGgdnSQTDRLVVNGNASGTTGVVVNNIGGEGAQTGDGITLVTVNGGSDAAFT 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1401 LNslikngkeykvtGDYIDVGAWEYALNK----KRKNWYLSVD--------------MRPEPGAFINNSKSMLDMFALQR 1462
Cdd:TIGR01414   79 LA------------NGKVDAGAYTYTLYKngteDNNNWYLTSSlpdltppgqqlsptYRAEAGSYAANANAALFLAELDT 146
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1463 YDIPGQHRYPTLFENlyNNGMWIQINNNSGSNSEVYDNLKTSYSLNTMMIGGDIYNWTDGYNYSHIGIMGGMGSAANKTT 1542
Cdd:TIGR01414  147 LRQRMGDLRSAARDA--GNGVWARIFGGDNHLDGDAGAAGYDQNTTGVQLGGDILLAGNADGDLHVGLMAGYAKADIKTR 224
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1543 StNNKRATGNVDGYTLGLYHVFQQNisdglneserQGLWTYSSIQYMDYDNSVSSTNNF---KADYGVNGFRLTGEVGYL 1619
Cdd:TIGR01414  225 S-YKYGGKGKVDGYGLGLYGTWLQD----------SGAYVDGVLQYSRFRNDVSSTGSNgkvSGKYNSNGFTASLEAGYR 293
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1620 KNIGGiqpSDFYVEPKLYLSHTELSGGVVEDLQGGKITYPN-SLTIIEPGVFFSYrkthESTSNDEAMFKDYIKQSVVDV 1698
Cdd:TIGR01414  294 YNLGG---NGWYVEPQAQLSYFGVSGDDYKESNGTRVLGGGgDSLQGRLGLRVGY----QFDLGTGRAVKPYLKANVLHE 366
                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2245374867 1699 wFGGGYSFKT-GNYSRTNFDSDMVEYNTSDNFVLKSgvEFEFLKDARLLLSSsysiNNDRNLSFILGGNYYF 1769
Cdd:TIGR01414  367 -FKGGTGVRVnGVTIRNDFSGTRAEYGVGVNAKIKD--NLSLYADVDYQKGG----KKYTDNQGNLGVRYSF 431
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
879-1645 1.93e-24

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 111.58  E-value: 1.93e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  879 TGNGATISSGNTFTVAKGNNASATLDYSDSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIGKGSSTIANVSVGAGS 958
Cdd:COG3468      5 GGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGT 84
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  959 NMLIKGNASIGVGDQAKAKFSVKDSVLNIGGSLVLGQGNSTEAEMSVEHSQLYSGGLLLGTANNAVVSMSANNSEISVVG 1038
Cdd:COG3468     85 GGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSG 164
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1039 DYTVAKGDGSEATLIYKNSDINLGNGILGAGSGVKTDLSLDNSKFVASDGIIIGKGDNAITNLSISDHSVFKGERINIGN 1118
Cdd:COG3468    165 GGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGS 244
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1119 GAYSKNSISITGNSIFDFGSSQESTIGEGDYSQSLVTINDASVYGDGSLTLAKGNNSFAVLNLQDNAVTNANNISLATGL 1198
Cdd:COG3468    245 AGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGG 324
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1199 GSKAIVNVSNMNSGQFNPVSMGAGDGYAEVNFDGVNGYTLSTNFIcmdSGSCADTVINVNRGTVSLSGTNDWKGQINVYD 1278
Cdd:COG3468    325 GSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGG---GGGSGGGGGAGGGGANTGSDGVGTGLTTGGTG 401
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1279 GTRLDARGNDAVDGILNVSKEAQVDFNgysqhMTGidNKGMIYLsdgsassDVYLDKDYVAHDGsgvqfgifgqkeadvM 1358
Cdd:COG3468    402 NNGGGGVGGGGGGGLTLTGGTLTVNGN-----YTG--NNGTLVL-------NTVLGDDNSPTDR---------------L 452
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1359 HVKGDTSGSSGIVVTTNSKNKIKKGGDILLVEVNGDSSGSFYLnslikngkeykvtGDYIDVGAWEYALNKKR-----KN 1433
Cdd:COG3468    453 VVNGNTSGTTGVRVNNAGGLGAQTVNGIEVVEVNGASDGAFTL-------------GGRVVAGAYEYTLYQGGsggddGN 519
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1434 WYLS----------VDMRPEPGAFINNSKSMLDMFALQRYDIPGQHRYPTLFENLYNNGMWIQINNNSGSNSEVYDNLKT 1503
Cdd:COG3468    520 WYLRstltppdpptPVYRPEVPSYLANPAAANGLFELGTLHDRLGERRYTDTGESDNSGAWLRVEGGHNRSRDSSGQLDY 599
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1504 SYSLNTMMIGGDIYNWTDGYNYSHIGIMGGMGSAANKTTSTNNKRATGNVDGYTLGLYHVFQQNisdglneserQGLWTY 1583
Cdd:COG3468    600 DSNRYGLQLGGDLLQWEDGGGRLHVGVMAGYGNGDSDVRSRATGTGKGDVDGYSLGLYGTWYGN----------NGFYVD 669
                          730       740       750       760       770       780
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2245374867 1584 SSIQYMDYDNSVSSTNNFKADYGVNGFRLTG--EVGYLKNIGgiqpSDFYVEPKLYLSHTELSG 1645
Cdd:COG3468    670 GVLQYSWFDNDVSSDDLGGVTGSYDGNGYSAslEAGYPFKLG----EGWSLEPQAQLIYQGVDF 729
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
25-1422 3.07e-20

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 98.69  E-value: 3.07e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867   25 NIDGNTTISDRNISGSLNIGINKNANVDINGTVNIKDYFSVATCNGQSSTCPAGGLNASANINNSATVGASVTIVGDSSK 104
Cdd:COG3210    176 SIPTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAA 255
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  105 GELNIDGGSTLYTQQLWVSGNDNDKTSNVSDDSNGSLKINNGSNVFVVSSQDDTPFKTNPVKWNQNIISQGNNITDGTVS 184
Cdd:COG3210    256 GAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNT 335
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  185 SGDLVLGKTGNGIIDIDNNSKLDVKNDVVVSTGVDGIPNEKPSVINIKNGSNFLIHGDMKGGISAAGQLELNMDNSSNLR 264
Cdd:COG3210    336 TANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIA 415
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  265 VDKSIAVGIGSKSNISVSAASGSSISSTGDFTVATGNNSNAKLELDASNLSVNGVSTIGSGDGSITKFDIKNGSVVTSIS 344
Cdd:COG3210    416 GNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTT 495
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  345 DMTLAKGKGTQANINISSSQLNTGSLSVGEGDNADVTMTGSGASVSSKNTFTVAKGNNASAKLNYTDSTINIGSGYIGEG 424
Cdd:COG3210    496 NATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGG 575
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  425 ESAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGSSASVDVKVTNAVLSADSLSLGGGEAAKV 504
Cdd:COG3210    576 TSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTAS 655
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  505 TMTGSGATVNSKNTFTVAKGNNASATLDYTDSKIDIGSGYIGEGEAAKTQLELNNSALTASGKV--FIGQGNTTQTNLTL 582
Cdd:COG3210    656 ANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIgaLANANGDTVTFGNL 735
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  583 NDKSSVNVSGEMSVAQGNS---------------ASVDVKVTNAVLSADSLSLGGGEAAKVTMTGNRATISSGNTFTVAK 647
Cdd:COG3210    736 GTGATLTLNAGVTITSGNAgtlsigltanttasgTTLTLANANGNTSAGATLDNAGAEISIDITADGTITAAGTTAINVT 815
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  648 GNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAAS 727
Cdd:COG3210    816 GSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGT 895
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  728 AKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKD 807
Cdd:COG3210    896 LTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSS 975
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  808 SALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISS 887
Cdd:COG3210    976 AVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISG 1055
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  888 GNTFTVAKGNNASATLDYSDSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIG--KGSSTIANVSVGAGSNMLIKGN 965
Cdd:COG3210   1056 GNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTstGGVTASKVGGTTTVGATGTSTA 1135
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  966 ASIGVGDQAKAKFSVKDSVLNIGGSLVLGQGNSTEAEMSVEHSQLYSGGLLLGTANNAVVSMSANNSEISVVGDYTVAKG 1045
Cdd:COG3210   1136 STEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTN 1215
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1046 DGSEATLIYKNSDINLGNGILGAGSGVKTDLSLDNSKFVASDGIIIGKGDNAITNLSISDHSVFKGERINIGNGAYSKNS 1125
Cdd:COG3210   1216 VTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATS 1295
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1126 ISITGNSIFDFGSSQESTIGEGDYSQSLVTINDASVYGDGSLTLAKGNNSFAVLNLQDNAVTNANNISLATGLGSKAIVN 1205
Cdd:COG3210   1296 AGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLA 1375
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1206 VSNMNSGQFNPVSMGAGDGYAEVNFDGVNGYTLSTNFICMDSGSCADTVINVNRGTVSLSGTNDWKGQINVYDGTRLDAR 1285
Cdd:COG3210   1376 ATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADA 1455
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1286 GNDAVDGILNVSKEAQVDFNGYSQHMTGIDNKGMIYLSDGSASSDVYLDKDYVAHDGSGVQFGIFGQKEADVMHVKGDTS 1365
Cdd:COG3210   1456 SAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSS 1535
                         1370      1380      1390      1400      1410
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 2245374867 1366 GSSGIVVTTNSKNKIKKGGDILLVEVNGDSSGSFYLNSLIKNGKEYKVTGDYIDVGA 1422
Cdd:COG3210   1536 VAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAG 1592
PRK14849 PRK14849
autotransporter barrel domain-containing lipoprotein;
82-1639 7.89e-13

autotransporter barrel domain-containing lipoprotein;


Pssm-ID: 184851 [Multi-domain]  Cd Length: 1806  Bit Score: 74.00  E-value: 7.89e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867   82 ASANINNSATVGASVTIVGDSSKG--ELNIDGGSTLYTQQLWVSGNDNDKTSNVSDD----------------SNGSLKI 143
Cdd:PRK14849   148 GTLNIKQKGHVDGGYLRLGSSTGGvgTVNVEGEDSVLTTELFEIGSYGTGSLNITDKgyvtssivailgyqagSNGQVVV 227
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  144 NNGSNVFVVSSQDDTPFKTNPVKWNQNIISQGNNIT---------------------DGTVSSGDLVLGKTGNGIIDIDN 202
Cdd:PRK14849   228 EKGGEWLIKNNDSSIEFQIGNQGTGEATIREGGLITaentiiggnatgvgtlnvqdqDSVITVRRLYNGYFGNGTVNISN 307
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  203 NSKLDVKNDVVVstgvdGIPNEKPSVINI--KNGSNFLIHGDMKGGI--SAAGQLELNMdnSSNLRVDKSIaVGIGSKSN 278
Cdd:PRK14849   308 NGLINNKEYSLV-----GVQDGSHGVVNVtdKGHWNFLGTGEAFRYIyiGDAGDGELNV--SREGKVDSGI-ITAGMKET 379
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  279 ISVSAASGSSISSTGDFTVATGNNSNAKLELDASNLSV-NGVSTIGSGDGSITKFDIKNGSVVTSISDMTLAKGKGTQAN 357
Cdd:PRK14849   380 GTGNITVKDKNSVITNLGTNLGYDGHGEMNISNEGLVVsNGGSSLGYGETGVGNVSITTGGMWEVNKNVYTTIGVAGVGN 459
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  358 INISSSQLNTGSLSVGEGDNAD-VTMTGSGASVSSKNTFTVAKGNNASAKLNYTD-STIN-IGSGYIGEGESAKTQLELN 434
Cdd:PRK14849   460 LNISDGGKFVSQNITFLGDKASgIGTLNLMDATSSFDTVGINVGNFGSGIVNVSNgATLNsTGYGFIGGNASGKGIVNIS 539
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  435 NSAL-----TASGKVFIGQGNTTQTNLTLNDKSSVNV-SGEMSVAQGSSASVDVKVTNAVLSADSLSLGGGEAAKVTMTG 508
Cdd:PRK14849   540 TDSLwnlktSSTNAQLLQVGVLGKGELNITTGGIVKArDTQIALNDKSKGDVRVDGQNSLLETFNMYVGTSGTGTLTLTN 619
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  509 SGatvnsknTFTVAKGNNASATLDYTDSKIDIGSGYigeGEAAKTQLELNNSALTASGK---VFI-------GQGNTTQT 578
Cdd:PRK14849   620 NG-------TLNVEGGEVYLGVFEPAVGTLNIGAAH---GEAAADAGFITNATKVEFGLgegVFVfnhtnnsDAGYQVDM 689
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  579 NLTLNDKSS--VNVSGEMSVAQGNSASVDVKVTNAVLS-----ADSLSLGGGEAAKVTMTGNRATISSGN-----TFTVA 646
Cdd:PRK14849   690 LITGDDKDGkvIHDAGHTVFNAGNTYSGKTLVNDGLLTiashtADGVTGMGSSEVTIASPGTLDILASTNsagdyTLTNA 769
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  647 KGNNASATLDYSDSKINIGNGYIGGGEKA------QTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSI 720
Cdd:PRK14849   770 LKGDGLMRVQLSSSDKMFGFTHATGTEFAgvaqlkDSTFTLERDNTAALTHAMLQSDSENTTSVKVGEQSIGGLAMNGGT 849
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  721 AQGNAASAKVIVDNADLSANSMSIGEGDTA------AVTMTGNgATISSSNTFTVARGNNASATL---DYSDSKINIGNG 791
Cdd:PRK14849   850 LIFDTDIPAATLAEGYISVDTLVVGAGDYTwkgrnyQVNGTGD-VLIDVPKPWNDPMANNPLTTLnllEHDDSHVGVQLV 928
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  792 YIGGGEKAQTVLTLKDSalaatgdvimgQGQETQTDLTLspqssikvsgnmsiaqgNAASAKVIVDNADLSANsMSIGEG 871
Cdd:PRK14849   929 KAQTVIGSGGSLTLRDL-----------QGDEVEADKTL-----------------HIAQNGTVVAEGDYGFR-LTTAPG 979
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  872 DTAAVTMTGNGATISSGNTFTVAKGNNASATLDYSDSKINiGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIGKgSSTIAN 951
Cdd:PRK14849   980 DGLYVNYGLKALNIHGGQKLTLAEHGGAYGATADMSAKIG-GEGDLAINTVRQVSLSNGQNDYQGATYVQMGT-LRTDAD 1057
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  952 VSVGAGSNMLIKGNASIGVGDQAKA----KFSVKDSVLNIGGSLVLGQGNSTEAEMSVEHSQLYSGGLL----LGTANNA 1023
Cdd:PRK14849  1058 GALGNTRELNISNAAIVDLNGSTQTvetfTGQMGSTVLFKEGALTVNKGGISQGELTGGGNLNVTGGTLaiegLNARYNA 1137
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1024 VVSMSANnSEISVVGDYTVAKGD-GSEATLIYKNSDINLGNGILGAG---SGVKTDLSLD--NSKFVASDGIIIGKGDNA 1097
Cdd:PRK14849  1138 LTSISPN-AEVSLDNTQGLGRGNiANDGLLTLKNVTGELRNSISGKGivsATARTDVELDgdNSRFVGQFNIDTGSALSV 1216
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1098 ITNLSISDHSVFKGERINIGNGAYSKNSISITGnsifdfgSSQESTIGEGdysqsLVTINDASVYGDGSLTLAKGNNSFa 1177
Cdd:PRK14849  1217 NEQKNLGDASVINNGLLTISTERSWAMTHSISG-------SGDVTKLGTG-----ILTLNNDSAAYQGTTDIVGGEIAF- 1283
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1178 vlnlqdnavtnannislatglGSKAIVNVSNMNsgqfnpvsmgagdgyaevnfdgvngytlstnficmdsgscadtvINV 1257
Cdd:PRK14849  1284 ---------------------GSDSAINMASQH--------------------------------------------INI 1298
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1258 NRGTVsLSGTNDWKGQINVYDGTRLDArGNDAVDGILNVSKEAQVDFNGysqhmtgidnkgmiylsdGSASSDVYLDKDY 1337
Cdd:PRK14849  1299 HNSGV-MSGNVTTAGDVNVMPGGTLRV-AKTTIGGNLENGGTVQMNSEG------------------GKPGNVLTVNGNY 1358
                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1338 VAHDGSGVQFGIFG--QKEADVMHVKGDTSGSSGIVVTTNSKNKIKKGGDILLVEVNGDSSGSFYLnslikngkeykvTG 1415
Cdd:PRK14849  1359 TGNNGLMTFNATLGgdNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFAL------------TT 1426
                         1450      1460      1470      1480      1490      1500      1510      1520
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1416 DYIDVGAWEYALNKKR----KNWYLSVD--------------------------MRPEPGAFINNSKSMLDMFALQRYDI 1465
Cdd:PRK14849  1427 GTVEAGAYVYTLAKGKgndeKNWYLTSKwdgvtppdtpdpinnppvvdpegpsvYRPEAGSYISNIAAANSLFSHRLHDR 1506
                         1530      1540      1550      1560      1570      1580      1590      1600
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1466 PGQHRY-PTLFENLYNNGMWIQINNNSGSNSEVYDNLKTSYSLNTMMIGGDIYNW-TDGYNYSHIGIMGGMGSAANKTTS 1543
Cdd:PRK14849  1507 LGEPQYiDSLHSQGSASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWsSNAQDRWHLGVMAGYANQHSNTQS 1586
                         1610      1620      1630      1640      1650      1660      1670      1680
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1544 TN-NKRATGNVDGYTLGLYHVFQQnisdglNESERQGLWTYSSIQYMDYDNSVSSTNNFKADYGVNGFRLTGEVGYLKNI 1622
Cdd:PRK14849  1587 NRvGYKSDGRISGYSAGLYATWYQ------NDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEA 1660
                         1690      1700
                   ....*....|....*....|..
gi 2245374867 1623 GGIQPSD-----FYVEPKLYLS 1639
Cdd:PRK14849  1661 GTFSGSEgtlntWYVQPQAQIT 1682
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
1028-1635 1.56e-12

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 72.91  E-value: 1.56e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1028 SANNSEISVVGDYTVAKGDGSEAtliyknSDINLGNGILGAGSGVKTDLSLDNSKFVASDGIIiGKG--DNAITNLSISD 1105
Cdd:PRK15313   144 TPDNPVFIITGDRTRIYVDGQDG------DGINAGYNSLGQGWTGSANIYVGDDLYIKTTGSQ-GRGitANAMRDASRAK 216
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1106 HSVFKGERINI-GNGAYSKNSISITGNSIFDFG------SSQESTIGEGDYSQSLVTI-NDASVYGDGSLTLAKGNNSfA 1177
Cdd:PRK15313   217 NTIVVGNRAHIvTTGDSSEGLRTGQSGSLIRLGddatieTSGASSTGIYAASSSRTELgNNATITVNGASAHAVYATN-A 295
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1178 VLNLQDNAVTNANNISLATGLgSKAIVNVSNMNSGQFNpvsMGAGDGYAEVNFDGVNGYTLSTNFI-CMDSGSCADTVIN 1256
Cdd:PRK15313   296 TVNLGENATISVNSASKAASY-SKAPAGLYALSRGAIN---LAGGAAITMAGDNSSESYAISTETGgIVDGSSGGRFVID 371
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1257 VN---RGTVSLSGT---NDWKGQINVYDGTRLDA----RGNDAVDGILNVSKEAQVDFNGYSQHMTGI--DNKGMIYLS- 1323
Cdd:PRK15313   372 GDiraAGATAASGTlpqQNSTIKLNMTDNSRWDGasyiTSATAGTGVISVQMSDATWNMTSSSTLTDLtlNSGATINFSh 451
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1324 -DGSASSDVYLDKDYVAHDGSGVQFGIFGQ--KEADVMHVKGDTSGSSGIVVTTNSKNKIKKGGDILLVEVNGDSSGSFY 1400
Cdd:PRK15313   452 eDGEPWQTLTINEDYVGNGGKLVFNTVLNDddSETDRLQVLGNTSGNTFVAVNNIGGAGAQTIEGIEIVNVAGNSNGTFE 531
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1401 LNSLIKngkeykvtgdyidVGAWEYALNKKRKNWYLS------------------------------------------- 1437
Cdd:PRK15313   532 KASRIV-------------AGAYDYNVVQKGKNWYLTsyiepdepiipdpvdpvipdpvipdpvdpdpvdpvipdpvipd 598
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1438 -----------VD-----------------------MRPEPGAFINNSKSMLDMFALQRYDIPGQHRYPTLFENLYN-NG 1482
Cdd:PRK15313   599 pvdpdpvdpepVDpvipdptipdigqsdtppitehqFRPEVGSYLANNYAANTLFMTRLHDRLGETQYTDMLTGEKKvTS 678
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1483 MWIQinnNSGSNSEVYD---NLKTSYSLNTMMIGGDIYNW-TDGYNYSHIGIMGGMGSAANKT-TSTNNKRATGNVDGYT 1557
Cdd:PRK15313   679 LWMR---NVGAHTRFNDgsgQLKTRINSYVLQLGGDLAQWsTDGLDRWHIGAMAGYANSQNRTlSSVSDYHSRGQVTGYS 755
                          650       660       670       680       690       700       710
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2245374867 1558 LGLYHVFQQNISDglneseRQGLWTYSSIQYMDYDNSVSSTNNFKADYGVNGFRLTGEVGYLKNIGGIQPSDFYVEPK 1635
Cdd:PRK15313   756 VGLYGTWYANNID------RSGAYVDTWMLYNWFDNKVMGQDQAAEKYKSKGITASVEAGYSFRLGESAHQSYWLQPK 827
auto_AIDA-I NF033176
autotransporter adhesin AIDA-I;
1314-1622 1.80e-07

autotransporter adhesin AIDA-I;


Pssm-ID: 380183 [Multi-domain]  Cd Length: 1287  Bit Score: 56.59  E-value: 1.80e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1314 IDNKGMIYLSDGSASSDVYLDKDYVAHDGSGVQFGIFGQKE---ADVMHVKGDTSGSSGIVVTTNSKNKIKKGGDILLVE 1390
Cdd:NF033176   834 VNNKNIILNPTKESAGNTLTVSNYTGTPGSVISLGGVLEGDnslTDRLVVKGNTSGQSDIVYVNEGGSGGQTIEGINIIS 913
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1391 VNGDSSGSFYLNslikngkeykvtgDYIDVGAWEYALNK------KRKNWYLSVDM--------RPEPGAFINNSKSMLD 1456
Cdd:NF033176   914 VEGNSDAEFSLK-------------NRVVAGAYDYTLQKgnvsgtDKKGWYLTSHLptsdtrqyRPENGSYATNMALANS 980
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1457 MFALqryDIPGQHRYPTLFENLY--NNGMWIQINNNSGSNSEVYDNLKTSYSLNTMMIGGDIYNW-TDGYNYSHIGIMGG 1533
Cdd:NF033176   981 LFLM---DLNERKQFSAVNDNTQpeSASVWMKITGGRTSGKLSDGQNKTTTNQFINQLGGDIYKYhAEKLGDFTLGIMGG 1057
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1534 MGSAANKTTS-TNNKRATGNVDGYTLGLYHVFQQNisdGLNESerqGLWTYSSIQYMDYDNSVSSTNNFKADYGVNGFRL 1612
Cdd:NF033176  1058 YANAKGKTINhTSKKGARNTLDGYSAGLYGTWYQN---GANAT---GLFAETWMQYNWFNASVKGDGLEEEKYNLNGLTA 1131
                          330
                   ....*....|
gi 2245374867 1613 TGEVGYLKNI 1622
Cdd:NF033176  1132 SVGGGYNLNV 1141
Autotransporter pfam03797
Autotransporter beta-domain; Secretion of protein products occurs by a number of different ...
1483-1646 2.34e-05

Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C terminus of the proteins it occurs in. The N terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.


Pssm-ID: 461054 [Multi-domain]  Cd Length: 255  Bit Score: 47.76  E-value: 2.34e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1483 MWIQINNNSGSNSEVYDNLKTSYSLNTMMIGGDIY---NWtdgynysHIGIMGGMGSAankTTSTNNKRATGNVDGYTLG 1559
Cdd:pfam03797    1 VWARGFGGRGKQDGDGGAAGYDADTGGLQVGADYRlgdNL-------RLGVAFGYSRS---DADVDGRGGSGDSDSYSLG 70
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1560 LYHVFQQNisdglneserQGLWTYSSIQYMDYDNSVSSTNNF-------KADYGVNGFRLTGEVGYLKNIGGiqpsDFYV 1632
Cdd:pfam03797   71 LYGTYYGD----------GGWYLDGGLGYGWHDNDTRRSVDLggfsetaKGDYDGNGFGASLEAGYRFALGG----GWTL 136
                          170
                   ....*....|....
gi 2245374867 1633 EPKLYLSHTELSGG 1646
Cdd:pfam03797  137 EPFAGLAYVRLRLD 150
PRK15319 PRK15319
fibronectin-binding autotransporter adhesin ShdA;
293-1656 1.09e-03

fibronectin-binding autotransporter adhesin ShdA;


Pssm-ID: 185219 [Multi-domain]  Cd Length: 2039  Bit Score: 44.30  E-value: 1.09e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  293 GDFTVATGNNSNAKLELD--ASNLSVNGVSTIGSGDGSITKFDIKNGSVVTSISDMTLA-KGKGTQANINISSSQLNTGS 369
Cdd:PRK15319   595 GTFTVDAGSTFTVTSELDetTATSNWNGSKLTKQGDGTLILSNTGNDYGDTEIDGGILAaKDAAALGTGDVTIAESATLA 674
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  370 LSVGEGDNadvTMTGSGASVSSKNTFTVAKGNNasaklNYTDSTiNIGSGYIgegeSAKTQLELNNSALTASGKVFIGQG 449
Cdd:PRK15319   675 LSQGTLDN---NVTGEGQIVKSGSDELIVTGDN-----NYSGGT-TISGGTL----TADHADSLGSGDVDNSGVLKVGEG 741
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  450 nTTQTNLTLNDKSSVNVSGEMSVAQGSSASVDVKVTNAVLSADSL-SLGGGEA------------AKVTMTGSGATVNS- 515
Cdd:PRK15319   742 -ELENILSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTLTADHAdSLGSGDIdnsgvlkvgegdLENTLSGSGSLVKTg 820
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  516 KNTFTVAKGNNASATLDYTDSKI------DIGSGYI-GEGEAAKTQLELNNSALTASGKVFIGQGNttqtnLTLNDKSSV 588
Cdd:PRK15319   821 TGELTLSGGNDYSGGTTIIGGTLtadhadSLGSGDIdNSGVLQVGEGELKNTLFGSGSLVKTGTGE-----LTLNGDNDY 895
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  589 NVSGEMSVAQGNSASVDVKVTNAVLSADSLSLGGGEAaKVTMTGNRATISSGNTFTVAKGNNasatlDYSDSKINIGNGY 668
Cdd:PRK15319   896 SGGTTIDDGVLIADHADSLGTGAVANSGVLQVGEGEL-KNTLSGSGSLVKTGTGELTLSGDN-----SYSGGTTIIGGTL 969
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  669 IgggekAQTVLTLKDSALAATGDVIMGQGqETQTDLTLSPQSSIKVSGNMSIAQGNAASA-KVIVDNADLSANSMSIGEG 747
Cdd:PRK15319   970 I-----ADHADSLGTGAVANSGVLQVGEG-ELENTLSGSGSLVKTGTGELTLGGDNSYSGdTTIADGTLIAANVNALGSG 1043
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  748 D---TAAVTMTGNGA------TISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGEKAqtVLTLKDSALAAT----- 813
Cdd:PRK15319  1044 NidnSGTLMLDANGAfelaniTTHSGATTALAAGSTLDAGQLTQEDGSTLSIDLGAATDDA--VITADSVTLGGTlnvtg 1121
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  814 -GDVIMGQGQETQTDLTLSPQSSIKVS-GNMSIAQGNAasakvivDNADLSANSMSIGEGDTAAVTMTG--------NGA 883
Cdd:PRK15319  1122 iGSVTDSWTPEAYTYTLIDSDSAITSDfDDLTIAGMNR-------EDVDFLTIDGKVDEADNTHYDLTAslswyadrDNA 1194
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  884 TISSGNTFTVAK---GNNASATLDYSDSKINIGNGYVGvgeksHTLLKLDNSTFHAAGNIDIGKGSSTIANVSVGAGSNM 960
Cdd:PRK15319  1195 TTDAHGTFTLSDpdgSFNVAATLTDVDDTLDPGSRWDG-----KSLTKEGAGTLILSGDNDYSGGTTINEGTLVAASTTA 1269
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  961 LIKGNasigVGDQAKAKFSVKDSVLNIGGsLVLGQGNSTEAEMsvehsqlysgGLLLGTANNAVVSMSANNSEISVVGDY 1040
Cdd:PRK15319  1270 LGTGL----VDNNATLVLDADGEVSAVGG-ITTHSGATTQLAL----------GTSLDLGDSALIQQDGSTLNVELNSDS 1334
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1041 TVAKGDGSEATLiykNSDINLGNGILGAGSgvkTDLSLDNSKFVASDGIIIGKGDNAITNLSISDHSVFKGERINIGNGA 1120
Cdd:PRK15319  1335 VQPLITGGSATL---GGDLVVSDASLQARA---SDAEFQSFKLMDMDSDISGDFTSLTMNLTDQPDYLTVTGTINPEDAS 1408
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1121 YSKNSISITGNSIFDFGSSQEST--IGEGDYSQSLVTINDASVYGD-----------GSLTLAKGNNSFAVLNLQDNAVT 1187
Cdd:PRK15319  1409 EYLLTEGLSWNATATSATPAHGTftLGAGDSFEVTSVLGDKTGNGDwdgksltklgaGKLTLSGANTYTGDTNVQEGTLW 1488
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1188 NANNISLATgLGSKAIVNVSnmnsgqfnpvsmgAGDGYAEVNFDGVNGYTLSTNFICMDSGSCADTVIN-----VNRGTV 1262
Cdd:PRK15319  1489 LSGDGSIGE-MGSQQAVNVA-------------SGATFGGSNGTTVNGKVTNEGTLVFGDSEETGAIFTlngdlINMGTM 1554
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1263 SLSGTNDWKGQINVYDGTRLDARGNDAVDGILNVSKEAqvdfngysqhmtgidNKGMIYLSDGSASSDVYLDKdyvAHDG 1342
Cdd:PRK15319  1555 TSGSSSSTPGNTLYVDGNYTGNGGSLYLNTVLGDDDSA---------------TDKLVITGDASGTTDLYING---IGDG 1616
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1343 SGVQFGI-----FGQKEADVMHVKGDTSGS-------------SGIVVTTNSKNKIKKGGDILLVEvNGDSSGSFYLNSL 1404
Cdd:PRK15319  1617 AQTTNGIevvdvGGVSTSDAFELKNEVNAGlytyrlywnesdnDWYLASKAQSDDDDSGGDDTPSD-GGDDGGNVTPPDD 1695
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1405 IKNGKEYKVTGDYIDVGAweyaLNKKRKNWYLSVDMRPEPGAFINNSKSMLDMFALQRYDIPG-QHRYPtlfenlyNNGM 1483
Cdd:PRK15319  1696 GGDGGNVTPPDDGGDGGD----VTPPDHGGDVAPQYRADIGAYMGNQWMARNLQMQTLYDREGsQYRNA-------DGSV 1764
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1484 WIQINNNSGSNSEVYDNLKTSYSLNTMMIGGDIYNWTDGYNYSHIGIMGGMGSAanKTTSTNNKRA-------TGNVDGY 1556
Cdd:PRK15319  1765 WARFKAGKAESEAVSGNIDMDSNYSQFQLGGDILAWGNGQQSVTVGVMASYINA--DTDSTGNRGAdgsqftsSGNVDGY 1842
                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1557 TLGLYHVFqqnISDGLNESerqGLWTYSSIQYMDYDNSVSSTNNFKADYGVNGFRLTGEVGYLKNIGGIQPSDFYVEPKL 1636
Cdd:PRK15319  1843 NLGVYATW---FADAQTHS---GAYVDSWYQYGFYNNSVESGDAGSESYDSTANAVSLETGYRYDIALSNGNTVSLTPQA 1916
                         1450      1460
                   ....*....|....*....|
gi 2245374867 1637 YLSHTELSGGVVEDLQGGKI 1656
Cdd:PRK15319  1917 QVVWQNYSADSVKDNYGTRI 1936
PL2_Passenger_AT cd01344
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of ...
1260-1437 1.21e-03

Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of the nonprotease autotransporters, Ag43, AIDA-1 and IcsA, as well as, the less characterized ShdA, MisL, and BapA autotransporters.


Pssm-ID: 238654 [Multi-domain]  Cd Length: 188  Bit Score: 41.90  E-value: 1.21e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1260 GTVSLSGTNDWKGQINVyDGTRLDARGNDAVDGILNVSKEAQVDFNGYSQ---------HMTGIDNKGMIYLSDGSASSD 1330
Cdd:cd01344      1 GTITGNGGWKLGGDLTL-GGGALTLTTSLTLTGTLLTGGAGTLTLDSTSTwnitgtstlNVGNLTNAGTIDLGNGSPAGG 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1331 VYL-DKDYVAHDGSGVQFGIFGQKEA--DVMHVKGDTSGSSGIVVT--TNSKNKIKKGgdILLVEVNGDSS-GSFYLNSl 1404
Cdd:cd01344     80 TLTiTGNYTGNGGTLRLNTVLGDDDSptDRLVIDGDASGTTRVAVNnaGGSGATTGNG--IEVVEVGGTSSnGAFSLAG- 156
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 2245374867 1405 ikngkeykvtgdYIDVGAWEYALNKKR-----KNWYLS 1437
Cdd:cd01344    157 ------------RVVAGAYEYRLYRGGvsgndGNWYLR 182
Autotransporter smart00869
Autotransporter beta-domain; Secretion of protein products occurs by a number of different ...
1482-1758 1.85e-03

Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type IV pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different peptidase is used and in some cases no cleavage occurs.


Pssm-ID: 214872 [Multi-domain]  Cd Length: 268  Bit Score: 42.17  E-value: 1.85e-03
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  1482 GMWIQINNNSGSNSEVYDnlktsYSLNTMMIGGDIYNWTDGYnySHIGIMGGMGSAANKTTSTNNkRATGNVDGYTLGLY 1561
Cdd:smart00869    5 GGFLRQDSSGSGGSAGFD-----YDSYGLQLGADYRLSDNGN--LSLGFAAGYGNSKVDFSGNKG-SGKGDVDSYGLGLY 76
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  1562 HVFQQNisdglneserQGLWTYSSIQYMDYDNSVSSTNNF------KADYGVNGFRLTGEVGYLKNIGGiqpsDFYVEPK 1635
Cdd:smart00869   77 AGYSLG----------NGLYLDAQLGYGRSDNDTKRKVTLggagraKGSYDGTGYGASLEAGYRFYLGG----GLTLTPF 142
                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  1636 LYLSHTEL-------SGGVVEDLQGGKITYPNSLTIIepGVFFSYRKTHESTSNDEAmfkdYIKQSVVDVWFGGGYSFKT 1708
Cdd:smart00869  143 AGLAYSRVrqdgfteSGGGAFGLSVDSQSLDSLSLPL--GLRLEYRLALGDGATLTP----YLRLAYVHDFYDDNPVVTA 216
                           250       260       270       280       290
                    ....*....|....*....|....*....|....*....|....*....|
gi 2245374867  1709 GNYSRTNFDSDMVEYNTSDNFVLKSGVEFEFLKDARLLLSSSYSINNDRN 1758
Cdd:smart00869  217 SLLGSGASFTTSGTDLDRNAAELGLGLSAKLSNGLSLSLNYDGEFGGSSR 266
 
Name Accession Description Interval E-value
autotrans_barl TIGR01414
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, ...
1324-1769 1.60e-67

outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]


Pssm-ID: 273608 [Multi-domain]  Cd Length: 431  Bit Score: 235.36  E-value: 1.60e-67
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1324 DGSASSDVYLDKDYVAHdgSGVQFGIFGQ---KEADVMHVKGDTSGSSGIVVTTNSKNKIKKGGDILLVEVNGDSSGSFY 1400
Cdd:TIGR01414    1 PGGAFNTLTVNGLYTGN--GGFVMNTDLGgdnSQTDRLVVNGNASGTTGVVVNNIGGEGAQTGDGITLVTVNGGSDAAFT 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1401 LNslikngkeykvtGDYIDVGAWEYALNK----KRKNWYLSVD--------------MRPEPGAFINNSKSMLDMFALQR 1462
Cdd:TIGR01414   79 LA------------NGKVDAGAYTYTLYKngteDNNNWYLTSSlpdltppgqqlsptYRAEAGSYAANANAALFLAELDT 146
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1463 YDIPGQHRYPTLFENlyNNGMWIQINNNSGSNSEVYDNLKTSYSLNTMMIGGDIYNWTDGYNYSHIGIMGGMGSAANKTT 1542
Cdd:TIGR01414  147 LRQRMGDLRSAARDA--GNGVWARIFGGDNHLDGDAGAAGYDQNTTGVQLGGDILLAGNADGDLHVGLMAGYAKADIKTR 224
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1543 StNNKRATGNVDGYTLGLYHVFQQNisdglneserQGLWTYSSIQYMDYDNSVSSTNNF---KADYGVNGFRLTGEVGYL 1619
Cdd:TIGR01414  225 S-YKYGGKGKVDGYGLGLYGTWLQD----------SGAYVDGVLQYSRFRNDVSSTGSNgkvSGKYNSNGFTASLEAGYR 293
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1620 KNIGGiqpSDFYVEPKLYLSHTELSGGVVEDLQGGKITYPN-SLTIIEPGVFFSYrkthESTSNDEAMFKDYIKQSVVDV 1698
Cdd:TIGR01414  294 YNLGG---NGWYVEPQAQLSYFGVSGDDYKESNGTRVLGGGgDSLQGRLGLRVGY----QFDLGTGRAVKPYLKANVLHE 366
                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2245374867 1699 wFGGGYSFKT-GNYSRTNFDSDMVEYNTSDNFVLKSgvEFEFLKDARLLLSSsysiNNDRNLSFILGGNYYF 1769
Cdd:TIGR01414  367 -FKGGTGVRVnGVTIRNDFSGTRAEYGVGVNAKIKD--NLSLYADVDYQKGG----KKYTDNQGNLGVRYSF 431
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
879-1645 1.93e-24

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 111.58  E-value: 1.93e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  879 TGNGATISSGNTFTVAKGNNASATLDYSDSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIGKGSSTIANVSVGAGS 958
Cdd:COG3468      5 GGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGT 84
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  959 NMLIKGNASIGVGDQAKAKFSVKDSVLNIGGSLVLGQGNSTEAEMSVEHSQLYSGGLLLGTANNAVVSMSANNSEISVVG 1038
Cdd:COG3468     85 GGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSG 164
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1039 DYTVAKGDGSEATLIYKNSDINLGNGILGAGSGVKTDLSLDNSKFVASDGIIIGKGDNAITNLSISDHSVFKGERINIGN 1118
Cdd:COG3468    165 GGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGS 244
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1119 GAYSKNSISITGNSIFDFGSSQESTIGEGDYSQSLVTINDASVYGDGSLTLAKGNNSFAVLNLQDNAVTNANNISLATGL 1198
Cdd:COG3468    245 AGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGG 324
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1199 GSKAIVNVSNMNSGQFNPVSMGAGDGYAEVNFDGVNGYTLSTNFIcmdSGSCADTVINVNRGTVSLSGTNDWKGQINVYD 1278
Cdd:COG3468    325 GSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGG---GGGSGGGGGAGGGGANTGSDGVGTGLTTGGTG 401
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1279 GTRLDARGNDAVDGILNVSKEAQVDFNgysqhMTGidNKGMIYLsdgsassDVYLDKDYVAHDGsgvqfgifgqkeadvM 1358
Cdd:COG3468    402 NNGGGGVGGGGGGGLTLTGGTLTVNGN-----YTG--NNGTLVL-------NTVLGDDNSPTDR---------------L 452
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1359 HVKGDTSGSSGIVVTTNSKNKIKKGGDILLVEVNGDSSGSFYLnslikngkeykvtGDYIDVGAWEYALNKKR-----KN 1433
Cdd:COG3468    453 VVNGNTSGTTGVRVNNAGGLGAQTVNGIEVVEVNGASDGAFTL-------------GGRVVAGAYEYTLYQGGsggddGN 519
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1434 WYLS----------VDMRPEPGAFINNSKSMLDMFALQRYDIPGQHRYPTLFENLYNNGMWIQINNNSGSNSEVYDNLKT 1503
Cdd:COG3468    520 WYLRstltppdpptPVYRPEVPSYLANPAAANGLFELGTLHDRLGERRYTDTGESDNSGAWLRVEGGHNRSRDSSGQLDY 599
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1504 SYSLNTMMIGGDIYNWTDGYNYSHIGIMGGMGSAANKTTSTNNKRATGNVDGYTLGLYHVFQQNisdglneserQGLWTY 1583
Cdd:COG3468    600 DSNRYGLQLGGDLLQWEDGGGRLHVGVMAGYGNGDSDVRSRATGTGKGDVDGYSLGLYGTWYGN----------NGFYVD 669
                          730       740       750       760       770       780
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2245374867 1584 SSIQYMDYDNSVSSTNNFKADYGVNGFRLTG--EVGYLKNIGgiqpSDFYVEPKLYLSHTELSG 1645
Cdd:COG3468    670 GVLQYSWFDNDVSSDDLGGVTGSYDGNGYSAslEAGYPFKLG----EGWSLEPQAQLIYQGVDF 729
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
25-1422 3.07e-20

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 98.69  E-value: 3.07e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867   25 NIDGNTTISDRNISGSLNIGINKNANVDINGTVNIKDYFSVATCNGQSSTCPAGGLNASANINNSATVGASVTIVGDSSK 104
Cdd:COG3210    176 SIPTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAA 255
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  105 GELNIDGGSTLYTQQLWVSGNDNDKTSNVSDDSNGSLKINNGSNVFVVSSQDDTPFKTNPVKWNQNIISQGNNITDGTVS 184
Cdd:COG3210    256 GAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNT 335
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  185 SGDLVLGKTGNGIIDIDNNSKLDVKNDVVVSTGVDGIPNEKPSVINIKNGSNFLIHGDMKGGISAAGQLELNMDNSSNLR 264
Cdd:COG3210    336 TANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIA 415
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  265 VDKSIAVGIGSKSNISVSAASGSSISSTGDFTVATGNNSNAKLELDASNLSVNGVSTIGSGDGSITKFDIKNGSVVTSIS 344
Cdd:COG3210    416 GNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTT 495
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  345 DMTLAKGKGTQANINISSSQLNTGSLSVGEGDNADVTMTGSGASVSSKNTFTVAKGNNASAKLNYTDSTINIGSGYIGEG 424
Cdd:COG3210    496 NATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGG 575
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  425 ESAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGSSASVDVKVTNAVLSADSLSLGGGEAAKV 504
Cdd:COG3210    576 TSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTAS 655
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  505 TMTGSGATVNSKNTFTVAKGNNASATLDYTDSKIDIGSGYIGEGEAAKTQLELNNSALTASGKV--FIGQGNTTQTNLTL 582
Cdd:COG3210    656 ANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIgaLANANGDTVTFGNL 735
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  583 NDKSSVNVSGEMSVAQGNS---------------ASVDVKVTNAVLSADSLSLGGGEAAKVTMTGNRATISSGNTFTVAK 647
Cdd:COG3210    736 GTGATLTLNAGVTITSGNAgtlsigltanttasgTTLTLANANGNTSAGATLDNAGAEISIDITADGTITAAGTTAINVT 815
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  648 GNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAAS 727
Cdd:COG3210    816 GSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGT 895
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  728 AKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKD 807
Cdd:COG3210    896 LTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSS 975
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  808 SALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISS 887
Cdd:COG3210    976 AVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISG 1055
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  888 GNTFTVAKGNNASATLDYSDSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIG--KGSSTIANVSVGAGSNMLIKGN 965
Cdd:COG3210   1056 GNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTstGGVTASKVGGTTTVGATGTSTA 1135
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  966 ASIGVGDQAKAKFSVKDSVLNIGGSLVLGQGNSTEAEMSVEHSQLYSGGLLLGTANNAVVSMSANNSEISVVGDYTVAKG 1045
Cdd:COG3210   1136 STEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTN 1215
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1046 DGSEATLIYKNSDINLGNGILGAGSGVKTDLSLDNSKFVASDGIIIGKGDNAITNLSISDHSVFKGERINIGNGAYSKNS 1125
Cdd:COG3210   1216 VTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATS 1295
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1126 ISITGNSIFDFGSSQESTIGEGDYSQSLVTINDASVYGDGSLTLAKGNNSFAVLNLQDNAVTNANNISLATGLGSKAIVN 1205
Cdd:COG3210   1296 AGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLA 1375
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1206 VSNMNSGQFNPVSMGAGDGYAEVNFDGVNGYTLSTNFICMDSGSCADTVINVNRGTVSLSGTNDWKGQINVYDGTRLDAR 1285
Cdd:COG3210   1376 ATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADA 1455
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1286 GNDAVDGILNVSKEAQVDFNGYSQHMTGIDNKGMIYLSDGSASSDVYLDKDYVAHDGSGVQFGIFGQKEADVMHVKGDTS 1365
Cdd:COG3210   1456 SAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSS 1535
                         1370      1380      1390      1400      1410
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 2245374867 1366 GSSGIVVTTNSKNKIKKGGDILLVEVNGDSSGSFYLNSLIKNGKEYKVTGDYIDVGA 1422
Cdd:COG3210   1536 VAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAG 1592
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
25-1241 3.49e-19

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 95.22  E-value: 3.49e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867   25 NIDGNTTISDRNISGSLNIGINKNANVDINGTVNIKDYFSVATCNGQSSTCPAGGLNASANINNSATVGASVTIVGDSSK 104
Cdd:COG3210    422 NAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISN 501
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  105 GELNIDGGSTLYTQQLWVSGNDNDKTSNVSDDSNGSLKINNGSNVFVVSSQDDTPFKTNPVKWNQNIISQGNNITDGTVS 184
Cdd:COG3210    502 NAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATT 581
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  185 SGDLVLGKTGNGII--DIDNNSKLDVKNDVVVSTGVDGIPNEKPSVINIKNGSNFLIHGDMKGGISAAGQLELNMDNSSN 262
Cdd:COG3210    582 AGNSTSATGGTGTNsgGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNT 661
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  263 LRVDKSIAVGIGSKSNISVSAASGSSISSTGDFTVATGNNSNAKLELDASNLSVNGV--STIGSGDGSITKFDIKNGSVV 340
Cdd:COG3210    662 TGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQigALANANGDTVTFGNLGTGATL 741
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  341 TSISDMTLAKGKGTQANINISSSQLNTGS----LSVGEGDNADVTMTGSGASVSSKNTFTVAKGNNASAKLNYTDSTINI 416
Cdd:COG3210    742 TLNAGVTITSGNAGTLSIGLTANTTASGTtltlANANGNTSAGATLDNAGAEISIDITADGTITAAGTTAINVTGSGGTI 821
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  417 GSGYIGEGESAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGSSASVDVKVTNAVLSADSLSL 496
Cdd:COG3210    822 TINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGT 901
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  497 GGGEAAKVTMTGSGATVNSKNTFTVAKGNNASATLDYTDSKIDIGSGYIGEGEAAKTQLELNNSALTASGKVFIGQGNTT 576
Cdd:COG3210    902 TTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSA 981
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  577 QTNLTLNDKSSVNVSGEMSVAQGNSASVDVKVTNAVLSADSLSLGGGEAAKVTMTGNRATISSGNTFTVAKGNNASATLD 656
Cdd:COG3210    982 NSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAAL 1061
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  657 YSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNAD 736
Cdd:COG3210   1062 TASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAG 1141
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  737 LSANSMSIGEGDTAAVTMTGNGATISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDV 816
Cdd:COG3210   1142 AGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTT 1221
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  817 IMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSGNTFTVAKG 896
Cdd:COG3210   1222 LTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLD 1301
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  897 NNASATLDYSDSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIGKGSSTIANVSVGAGSNMLIKGNASIGVGDQAKA 976
Cdd:COG3210   1302 TTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAG 1381
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  977 KFSVKDSVLNIGGSLVLGQGNSTEAEMSVEHSQLYSGGLLLGTANNAVVSMSANNSEISVVGDYTVAKGDGSEATLIYKN 1056
Cdd:COG3210   1382 TVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADASAINTG 1461
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1057 SDINLGNGILGAGSGVKTDLSLDNSKFVASDGIIIGKGDNAITNLSISDHSVFKGERINIGNGAYSKNSISITGNSIFDF 1136
Cdd:COG3210   1462 NASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGT 1541
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1137 GSSQESTIGEGDYSQSLVTINDASVYGDGSLTLAKGNNSFAVLNLQDNAVTNANNISLATGLGSKAIVNVSNMNSGQFNP 1216
Cdd:COG3210   1542 GGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNTATLTLSLAEGTNAEYGGTTNVTSGTAG 1621
                         1210      1220
                   ....*....|....*....|....*
gi 2245374867 1217 VSMGAGDGYAEVNFDGVNGYTLSTN 1241
Cdd:COG3210   1622 NAGATGANSNTVVTTNGGEGVLALV 1646
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
36-1422 9.67e-19

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 93.68  E-value: 9.67e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867   36 NISGSLNIGINKNANVDINGTVNIKDYFSVATCNGQSSTCPAGGLNASANINNSATVGASVTIVGDSSKGELNIDGGSTL 115
Cdd:COG3210      2 SGGLAGTTGNKTIGVDIAVTTTAATLGSNTAGTSGLNILGSGGVGTAGGIASNAGTTASTSGGSGTAGGVGNTSASTGGI 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  116 YTQQLWVSGNDNDKTSNVSDDSNGSLKINNGSNVFVVSSQDDTPFKTNPVKWNQNIISQGNNITDGTVSSGDLVLGKTGN 195
Cdd:COG3210     82 GAAAANTAGTLETGLTSNIGGGSVNGSNSTGNGTLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNN 161
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  196 GIIDIDNNSKLDVKNDVVVSTGVDGIPNEKPSVINIKN--------GSNFLIHGDMKGGISAAGQLELNMDNSSNLRVDK 267
Cdd:COG3210    162 TNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGalinatagVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVI 241
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  268 SIAVGIGSKSNISVSAASGSSISSTGDFTVATGNNSNAKLELDASNLSVNGVSTIGSGDGSITKFDIKNGSVVTSISDMT 347
Cdd:COG3210    242 STGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGIT 321
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  348 LAKGKGTQANINISSSQLNTGSLSVGEGDNADVTMTGSGASVSSKNTFTVAKGNNASAKLNYTDSTINIGSGYIGEGESA 427
Cdd:COG3210    322 TTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLG 401
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  428 KTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGSSASVDVKVTNAVLSADSLSLGGGEAAKVTMT 507
Cdd:COG3210    402 SGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTS 481
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  508 GSGATVNSKNTFTVAKGNNASATLD--YTDSKIDIGSGYIGEGEAAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDK 585
Cdd:COG3210    482 ATTLAGGGIGTVTTNATISNNAGGDanGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGS 561
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  586 SSVNVSGEMSVAQGNSASVDVKVTNAVLSADSLSLGGGEAAKVTMTGNRATISSGNTFTVAKGNNASATLDYSDSKINIG 665
Cdd:COG3210    562 NTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGA 641
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  666 NGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIG 745
Cdd:COG3210    642 ALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIGA 721
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  746 EGDTAAVTMTGNGATISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQ 825
Cdd:COG3210    722 LANANGDTVTFGNLGTGATLTLNAGVTITSGNAGTLSIGLTANTTASGTTLTLANANGNTSAGATLDNAGAEISIDITAD 801
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  826 TDLTLSPQSSIKVSGNM-SIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSGNTFTVAKGNNASATLD 904
Cdd:COG3210    802 GTITAAGTTAINVTGSGgTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGS 881
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  905 YSDSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIGKGSSTIANVSVGAGSNMLIKGNASIGVGDQAKAKFSVKDSV 984
Cdd:COG3210    882 GGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASD 961
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  985 LNIGGSLVLGQGNSTEAEMSVEHSQLYSGGLLLGTANNAVVSMSANNSEISVVGDYTVAKGDGSEATLIYKNSDINLGNG 1064
Cdd:COG3210    962 GAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAG 1041
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1065 ILGAGSGVKTDLSLDNSKFVASDGIIIGKGDNAITNLSISDHSVFKGERINIGNGAYSKNSISITGNSIFDFGSSQESTI 1144
Cdd:COG3210   1042 GQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTASKV 1121
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1145 GEGDYSQSLVTINDASVYGDGSLTLAKGNNSFAVLNLQDNAVTNANNISLATGLGSKAIVNVSNMNSGQFNPVSMGAGDG 1224
Cdd:COG3210   1122 GGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGG 1201
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1225 YAEVNFDGVNGYTLSTNFICMDSGSCADTVINVNRGTVSLSGTNDWKGQINVYDGTRLDARGNDAVDGILNVSKEAQVDF 1304
Cdd:COG3210   1202 DSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATA 1281
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1305 NGYSQHMTGIDNKGMIYLSDGSASSDVYLDKDYVAHDGSGVQFGIFGQKEADVMHVKGDTSGSSGIVVTTNSKNKIKKGG 1384
Cdd:COG3210   1282 TGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDS 1361
                         1370      1380      1390
                   ....*....|....*....|....*....|....*...
gi 2245374867 1385 DILLVEVNGDSSGSFYLNSLIKNGKEYKVTGDYIDVGA 1422
Cdd:COG3210   1362 AAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAG 1399
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
25-1265 1.19e-18

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 93.29  E-value: 1.19e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867   25 NIDGNTTISDRNISGSLNIGINKNANVDINGTVNIKDYFSVATCNGQSSTCPAGGLNASANINNSATVGASVTIVGDSSK 104
Cdd:COG3210    452 SGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGG 531
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  105 GELNIDGGSTLYTQQLWVSGNDNDKTSNVSDDSNGSLKINNGSNVFVVSSQDDTPFKTNPVKWNQNIISQGNNITDGTVS 184
Cdd:COG3210    532 TGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGAT 611
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  185 SGDLVLGKTGNGIIDIDNNSKLDVKNDVVVSTGVDGIPNEKPSVINIKNGSNFLIHGDMKGGISAAGQLELNMDNSSNLR 264
Cdd:COG3210    612 GTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTL 691
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  265 VDKSIAVGIGSKSNISVSAASGSSISSTGDFTVATGNNSNAKLELDASNLSVNGVSTIGSGD-----GSITKFDIKNGSV 339
Cdd:COG3210    692 NAATGGTLNNAGNTLTISTGSITVTGQIGALANANGDTVTFGNLGTGATLTLNAGVTITSGNagtlsIGLTANTTASGTT 771
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  340 VTSISDMTLAKGKGTQANINISSSQLNTGSLSVGEGDNADVTMTGSGASVSSKNTFT-VAKGNNASAKLNYTDSTINIGS 418
Cdd:COG3210    772 LTLANANGNTSAGATLDNAGAEISIDITADGTITAAGTTAINVTGSGGTITINTATTgLTGTGDTTSGAGGSNTTDTTTG 851
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  419 GYIGEGESAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGSSASVDVKVTNAVLSADSLSLGG 498
Cdd:COG3210    852 TTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNA 931
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  499 GEAAKVTMTGSGATVNSKNTFTVAKGNNASATLDYTDSKIDIGSGYIGEGEAAKTQLELNNSALTASGKVFIGQGNTTQT 578
Cdd:COG3210    932 AAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGG 1011
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  579 NLTLNDKSSVNVSGEMSVAQGNSASVDVKVTNAVLSADSLSLGGGEAAKVTMTGNRATISSGNTFTVAKGNNASATLDYS 658
Cdd:COG3210   1012 SGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTT 1091
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  659 DSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLS 738
Cdd:COG3210   1092 HTLGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAA 1171
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  739 ANSMSIGEGDTAAVTMTGNGATISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIM 818
Cdd:COG3210   1172 ATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSAS 1251
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  819 GQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSGNTFTVAKGNN 898
Cdd:COG3210   1252 GTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAV 1331
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  899 ASATLDYSDSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIGKGSSTIANVSVGAGSNMLIKGNASIGVGDQAKAKF 978
Cdd:COG3210   1332 NSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGV 1411
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  979 SVKDSVLNIGGSLVLGQGNSTEAEMSVEHSQLYSGGLLLGTANNAVVSMSANNSEISVVGDYTVAKGDGSEATLIYKNSD 1058
Cdd:COG3210   1412 GNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNG 1491
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1059 INLGNGILGAGSGVKTDLSLDNSKFVASDGIIIGKGDNAITNLSISDHSVFKGERINIGNGAYSKNSISITGNSIFDFGS 1138
Cdd:COG3210   1492 AGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGT 1571
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1139 SQESTIGEGDYSQSLVTINDASVYGDGSLTLAKGNNSFAVLNLQDNAVTNANNISLATGLGSKAIVNVSNMNSGQFNPVS 1218
Cdd:COG3210   1572 DGAGGDTGGADDTGAQAPTAGNTATLTLSLAEGTNAEYGGTTNVTSGTAGNAGATGANSNTVVTTNGGEGVLALVAGGNT 1651
                         1210      1220      1230      1240
                   ....*....|....*....|....*....|....*....|....*..
gi 2245374867 1219 MGAGDGYAEVNFDGVNGYTLSTNFICMDSGSCADTVINVNRGTVSLS 1265
Cdd:COG3210   1652 TNGTTLSGAVNGAGNGWAVDLTDATLAGLGGATTAAAGNVATGDTAP 1698
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
16-1092 1.37e-13

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 76.73  E-value: 1.37e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867   16 LGSRLAYAENIDGNTTISDRNISGSLNIGINKNANVDINGTVNIKDYFSVATCNGQSSTCPAGGLNASANINNSATVGAS 95
Cdd:COG3210    609 GATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTG 688
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867   96 VTIVGDSSKGELNIDGGSTLYTQQLWVSGN-------DNDKTSNVSDDSNGSLKINNGSNVFVVSSQDDTPFKTNPVKWN 168
Cdd:COG3210    689 TTLNAATGGTLNNAGNTLTISTGSITVTGQigalanaNGDTVTFGNLGTGATLTLNAGVTITSGNAGTLSIGLTANTTAS 768
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  169 QNIISQGNNITDGTVSSGDLVLGKTGNGIIDIDNNSKLDVKNDVVVSTGVDGIPNEKPSVINIKNGSNFLIHGDMKGGIS 248
Cdd:COG3210    769 GTTLTLANANGNTSAGATLDNAGAEISIDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDT 848
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  249 AAGQLELNMDNSSNLRVDKSIAVGIGSKSNISVSAASGSSISSTGDFTVATGNNSNAKLELDASNLSVNGVSTIGSGDGS 328
Cdd:COG3210    849 TTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTG 928
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  329 ITKFDIKNGSVVTSISDMTLAKGKGTQANINISSSQLNTGSLSVGEGDNADVTMTGSGASVSSKNTFTVAKGNNASAKLN 408
Cdd:COG3210    929 GNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTAST 1008
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  409 YTDSTINIGSGYIGEGESAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGSSASVDVKVTNAV 488
Cdd:COG3210   1009 TGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGA 1088
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  489 LSADSLSLGGGEAAKVTMTGSGATVNSKNTFTVAKGNNASATLDYTDSKIDIGSGYIGEGEAAKTQLELNNSALTASGKV 568
Cdd:COG3210   1089 GTTHTLGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTA 1168
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  569 FIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGNSASVD-----VKVTNAVLSADSLSLGGGEAAKVTMTGNRATISSGNTF 643
Cdd:COG3210   1169 VAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGgstttIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAG 1248
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  644 TVAKGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQG 723
Cdd:COG3210   1249 SASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAV 1328
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  724 NAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGEKAQTVL 803
Cdd:COG3210   1329 AAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSG 1408
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  804 TLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGA 883
Cdd:COG3210   1409 TGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTG 1488
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  884 TISSGNTFTVAKGNNASATLDYSDSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIGKGSSTIANVSVGAGSNMLIK 963
Cdd:COG3210   1489 GNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGV 1568
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  964 GNASIGVGDQAKAKFSVKDSVLNIGGSLVLGQGNSTEAEMSVEHSQLYSGGLLLGTANNAVVSMSANNSEISVVGDYTVA 1043
Cdd:COG3210   1569 GGTDGAGGDTGGADDTGAQAPTAGNTATLTLSLAEGTNAEYGGTTNVTSGTAGNAGATGANSNTVVTTNGGEGVLALVAG 1648
                         1050      1060      1070      1080
                   ....*....|....*....|....*....|....*....|....*....
gi 2245374867 1044 KGDGSEATLIYKNSDINLGNGILGAGSGVKTDLSLDNSKFVASDGIIIG 1092
Cdd:COG3210   1649 GNTTNGTTLSGAVNGAGNGWAVDLTDATLAGLGGATTAAAGNVATGDTA 1697
PRK14849 PRK14849
autotransporter barrel domain-containing lipoprotein;
82-1639 7.89e-13

autotransporter barrel domain-containing lipoprotein;


Pssm-ID: 184851 [Multi-domain]  Cd Length: 1806  Bit Score: 74.00  E-value: 7.89e-13
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867   82 ASANINNSATVGASVTIVGDSSKG--ELNIDGGSTLYTQQLWVSGNDNDKTSNVSDD----------------SNGSLKI 143
Cdd:PRK14849   148 GTLNIKQKGHVDGGYLRLGSSTGGvgTVNVEGEDSVLTTELFEIGSYGTGSLNITDKgyvtssivailgyqagSNGQVVV 227
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  144 NNGSNVFVVSSQDDTPFKTNPVKWNQNIISQGNNIT---------------------DGTVSSGDLVLGKTGNGIIDIDN 202
Cdd:PRK14849   228 EKGGEWLIKNNDSSIEFQIGNQGTGEATIREGGLITaentiiggnatgvgtlnvqdqDSVITVRRLYNGYFGNGTVNISN 307
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  203 NSKLDVKNDVVVstgvdGIPNEKPSVINI--KNGSNFLIHGDMKGGI--SAAGQLELNMdnSSNLRVDKSIaVGIGSKSN 278
Cdd:PRK14849   308 NGLINNKEYSLV-----GVQDGSHGVVNVtdKGHWNFLGTGEAFRYIyiGDAGDGELNV--SREGKVDSGI-ITAGMKET 379
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  279 ISVSAASGSSISSTGDFTVATGNNSNAKLELDASNLSV-NGVSTIGSGDGSITKFDIKNGSVVTSISDMTLAKGKGTQAN 357
Cdd:PRK14849   380 GTGNITVKDKNSVITNLGTNLGYDGHGEMNISNEGLVVsNGGSSLGYGETGVGNVSITTGGMWEVNKNVYTTIGVAGVGN 459
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  358 INISSSQLNTGSLSVGEGDNAD-VTMTGSGASVSSKNTFTVAKGNNASAKLNYTD-STIN-IGSGYIGEGESAKTQLELN 434
Cdd:PRK14849   460 LNISDGGKFVSQNITFLGDKASgIGTLNLMDATSSFDTVGINVGNFGSGIVNVSNgATLNsTGYGFIGGNASGKGIVNIS 539
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  435 NSAL-----TASGKVFIGQGNTTQTNLTLNDKSSVNV-SGEMSVAQGSSASVDVKVTNAVLSADSLSLGGGEAAKVTMTG 508
Cdd:PRK14849   540 TDSLwnlktSSTNAQLLQVGVLGKGELNITTGGIVKArDTQIALNDKSKGDVRVDGQNSLLETFNMYVGTSGTGTLTLTN 619
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  509 SGatvnsknTFTVAKGNNASATLDYTDSKIDIGSGYigeGEAAKTQLELNNSALTASGK---VFI-------GQGNTTQT 578
Cdd:PRK14849   620 NG-------TLNVEGGEVYLGVFEPAVGTLNIGAAH---GEAAADAGFITNATKVEFGLgegVFVfnhtnnsDAGYQVDM 689
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  579 NLTLNDKSS--VNVSGEMSVAQGNSASVDVKVTNAVLS-----ADSLSLGGGEAAKVTMTGNRATISSGN-----TFTVA 646
Cdd:PRK14849   690 LITGDDKDGkvIHDAGHTVFNAGNTYSGKTLVNDGLLTiashtADGVTGMGSSEVTIASPGTLDILASTNsagdyTLTNA 769
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  647 KGNNASATLDYSDSKINIGNGYIGGGEKA------QTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSI 720
Cdd:PRK14849   770 LKGDGLMRVQLSSSDKMFGFTHATGTEFAgvaqlkDSTFTLERDNTAALTHAMLQSDSENTTSVKVGEQSIGGLAMNGGT 849
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  721 AQGNAASAKVIVDNADLSANSMSIGEGDTA------AVTMTGNgATISSSNTFTVARGNNASATL---DYSDSKINIGNG 791
Cdd:PRK14849   850 LIFDTDIPAATLAEGYISVDTLVVGAGDYTwkgrnyQVNGTGD-VLIDVPKPWNDPMANNPLTTLnllEHDDSHVGVQLV 928
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  792 YIGGGEKAQTVLTLKDSalaatgdvimgQGQETQTDLTLspqssikvsgnmsiaqgNAASAKVIVDNADLSANsMSIGEG 871
Cdd:PRK14849   929 KAQTVIGSGGSLTLRDL-----------QGDEVEADKTL-----------------HIAQNGTVVAEGDYGFR-LTTAPG 979
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  872 DTAAVTMTGNGATISSGNTFTVAKGNNASATLDYSDSKINiGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIGKgSSTIAN 951
Cdd:PRK14849   980 DGLYVNYGLKALNIHGGQKLTLAEHGGAYGATADMSAKIG-GEGDLAINTVRQVSLSNGQNDYQGATYVQMGT-LRTDAD 1057
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  952 VSVGAGSNMLIKGNASIGVGDQAKA----KFSVKDSVLNIGGSLVLGQGNSTEAEMSVEHSQLYSGGLL----LGTANNA 1023
Cdd:PRK14849  1058 GALGNTRELNISNAAIVDLNGSTQTvetfTGQMGSTVLFKEGALTVNKGGISQGELTGGGNLNVTGGTLaiegLNARYNA 1137
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1024 VVSMSANnSEISVVGDYTVAKGD-GSEATLIYKNSDINLGNGILGAG---SGVKTDLSLD--NSKFVASDGIIIGKGDNA 1097
Cdd:PRK14849  1138 LTSISPN-AEVSLDNTQGLGRGNiANDGLLTLKNVTGELRNSISGKGivsATARTDVELDgdNSRFVGQFNIDTGSALSV 1216
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1098 ITNLSISDHSVFKGERINIGNGAYSKNSISITGnsifdfgSSQESTIGEGdysqsLVTINDASVYGDGSLTLAKGNNSFa 1177
Cdd:PRK14849  1217 NEQKNLGDASVINNGLLTISTERSWAMTHSISG-------SGDVTKLGTG-----ILTLNNDSAAYQGTTDIVGGEIAF- 1283
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1178 vlnlqdnavtnannislatglGSKAIVNVSNMNsgqfnpvsmgagdgyaevnfdgvngytlstnficmdsgscadtvINV 1257
Cdd:PRK14849  1284 ---------------------GSDSAINMASQH--------------------------------------------INI 1298
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1258 NRGTVsLSGTNDWKGQINVYDGTRLDArGNDAVDGILNVSKEAQVDFNGysqhmtgidnkgmiylsdGSASSDVYLDKDY 1337
Cdd:PRK14849  1299 HNSGV-MSGNVTTAGDVNVMPGGTLRV-AKTTIGGNLENGGTVQMNSEG------------------GKPGNVLTVNGNY 1358
                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1338 VAHDGSGVQFGIFG--QKEADVMHVKGDTSGSSGIVVTTNSKNKIKKGGDILLVEVNGDSSGSFYLnslikngkeykvTG 1415
Cdd:PRK14849  1359 TGNNGLMTFNATLGgdNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFAL------------TT 1426
                         1450      1460      1470      1480      1490      1500      1510      1520
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1416 DYIDVGAWEYALNKKR----KNWYLSVD--------------------------MRPEPGAFINNSKSMLDMFALQRYDI 1465
Cdd:PRK14849  1427 GTVEAGAYVYTLAKGKgndeKNWYLTSKwdgvtppdtpdpinnppvvdpegpsvYRPEAGSYISNIAAANSLFSHRLHDR 1506
                         1530      1540      1550      1560      1570      1580      1590      1600
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1466 PGQHRY-PTLFENLYNNGMWIQINNNSGSNSEVYDNLKTSYSLNTMMIGGDIYNW-TDGYNYSHIGIMGGMGSAANKTTS 1543
Cdd:PRK14849  1507 LGEPQYiDSLHSQGSASSMWMRHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWsSNAQDRWHLGVMAGYANQHSNTQS 1586
                         1610      1620      1630      1640      1650      1660      1670      1680
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1544 TN-NKRATGNVDGYTLGLYHVFQQnisdglNESERQGLWTYSSIQYMDYDNSVSSTNNFKADYGVNGFRLTGEVGYLKNI 1622
Cdd:PRK14849  1587 NRvGYKSDGRISGYSAGLYATWYQ------NDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEA 1660
                         1690      1700
                   ....*....|....*....|..
gi 2245374867 1623 GGIQPSD-----FYVEPKLYLS 1639
Cdd:PRK14849  1661 GTFSGSEgtlntWYVQPQAQIT 1682
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
1028-1635 1.56e-12

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 72.91  E-value: 1.56e-12
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1028 SANNSEISVVGDYTVAKGDGSEAtliyknSDINLGNGILGAGSGVKTDLSLDNSKFVASDGIIiGKG--DNAITNLSISD 1105
Cdd:PRK15313   144 TPDNPVFIITGDRTRIYVDGQDG------DGINAGYNSLGQGWTGSANIYVGDDLYIKTTGSQ-GRGitANAMRDASRAK 216
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1106 HSVFKGERINI-GNGAYSKNSISITGNSIFDFG------SSQESTIGEGDYSQSLVTI-NDASVYGDGSLTLAKGNNSfA 1177
Cdd:PRK15313   217 NTIVVGNRAHIvTTGDSSEGLRTGQSGSLIRLGddatieTSGASSTGIYAASSSRTELgNNATITVNGASAHAVYATN-A 295
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1178 VLNLQDNAVTNANNISLATGLgSKAIVNVSNMNSGQFNpvsMGAGDGYAEVNFDGVNGYTLSTNFI-CMDSGSCADTVIN 1256
Cdd:PRK15313   296 TVNLGENATISVNSASKAASY-SKAPAGLYALSRGAIN---LAGGAAITMAGDNSSESYAISTETGgIVDGSSGGRFVID 371
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1257 VN---RGTVSLSGT---NDWKGQINVYDGTRLDA----RGNDAVDGILNVSKEAQVDFNGYSQHMTGI--DNKGMIYLS- 1323
Cdd:PRK15313   372 GDiraAGATAASGTlpqQNSTIKLNMTDNSRWDGasyiTSATAGTGVISVQMSDATWNMTSSSTLTDLtlNSGATINFSh 451
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1324 -DGSASSDVYLDKDYVAHDGSGVQFGIFGQ--KEADVMHVKGDTSGSSGIVVTTNSKNKIKKGGDILLVEVNGDSSGSFY 1400
Cdd:PRK15313   452 eDGEPWQTLTINEDYVGNGGKLVFNTVLNDddSETDRLQVLGNTSGNTFVAVNNIGGAGAQTIEGIEIVNVAGNSNGTFE 531
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1401 LNSLIKngkeykvtgdyidVGAWEYALNKKRKNWYLS------------------------------------------- 1437
Cdd:PRK15313   532 KASRIV-------------AGAYDYNVVQKGKNWYLTsyiepdepiipdpvdpvipdpvipdpvdpdpvdpvipdpvipd 598
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1438 -----------VD-----------------------MRPEPGAFINNSKSMLDMFALQRYDIPGQHRYPTLFENLYN-NG 1482
Cdd:PRK15313   599 pvdpdpvdpepVDpvipdptipdigqsdtppitehqFRPEVGSYLANNYAANTLFMTRLHDRLGETQYTDMLTGEKKvTS 678
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1483 MWIQinnNSGSNSEVYD---NLKTSYSLNTMMIGGDIYNW-TDGYNYSHIGIMGGMGSAANKT-TSTNNKRATGNVDGYT 1557
Cdd:PRK15313   679 LWMR---NVGAHTRFNDgsgQLKTRINSYVLQLGGDLAQWsTDGLDRWHIGAMAGYANSQNRTlSSVSDYHSRGQVTGYS 755
                          650       660       670       680       690       700       710
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2245374867 1558 LGLYHVFQQNISDglneseRQGLWTYSSIQYMDYDNSVSSTNNFKADYGVNGFRLTGEVGYLKNIGGIQPSDFYVEPK 1635
Cdd:PRK15313   756 VGLYGTWYANNID------RSGAYVDTWMLYNWFDNKVMGQDQAAEKYKSKGITASVEAGYSFRLGESAHQSYWLQPK 827
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
300-1408 1.99e-10

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 66.33  E-value: 1.99e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  300 GNNSNAKLELDASNLSVNGVSTIGSGDGSITKFDIKNGSVVTSISDMTLAKGKGTQANINISSSQLNTGSLSVGEGDNAD 379
Cdd:COG3210      1 GSGGLAGTTGNKTIGVDIAVTTTAATLGSNTAGTSGLNILGSGGVGTAGGIASNAGTTASTSGGSGTAGGVGNTSASTGG 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  380 VTMTGSGASVSSKNTFTVAKGNNASAKLNYTDSTINIGSGYIGEGESAKTQLELNNSALTASGKVFIGQGNTTQTNLTLN 459
Cdd:COG3210     81 IGAAAANTAGTLETGLTSNIGGGSVNGSNSTGNGTLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGN 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  460 DKSSVNVSGEMSVAQGSSASVDVkVTNAVLSADSLSLGGGEAAKVTMTGSGATVNSKNTFTVAKGNNASATLDYTDSKID 539
Cdd:COG3210    161 NTNTNNSSSGTNIGNSIPTTGGS-LNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAG 239
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  540 IGSGYIGEGEAAkTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGNSASVDVKVTNAVLSADSLS 619
Cdd:COG3210    240 VISTGGTDISSL-SVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAA 318
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  620 LGGGEAAKVTMTGNRATISSGNTFTVAKGNNASATLDYSDSKINIGNgyigggekAQTVLTLKDSALAATGDVIMGQGQE 699
Cdd:COG3210    319 GITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTG--------TGNGGGLTTAGAGTVASTVGTATAS 390
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  700 TQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSSNTFTVARGNNASATL 779
Cdd:COG3210    391 TGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTG 470
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  780 DYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNA 859
Cdd:COG3210    471 TVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSG 550
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  860 DLSANSMSIGEGDTAAVTMTGNGATISSGNTFTVAKGNNASATLDYSDSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGN 939
Cdd:COG3210    551 GASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGG 630
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  940 IDIGKGSSTIANVSVGAGSNMLIKGNASIGVGDQAKAKFSVKDSVLNIGGSLVLGQGNSTeaemsvehsqlySGGLLLGT 1019
Cdd:COG3210    631 GAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTT------------LNAATGGT 698
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1020 ANNAVVSMSANNSEISVVGDY-TVAKGDGSEATLI--YKNSDINLGNGILgAGSGVKTDLSLDNSKFVASDGIIIGKGD- 1095
Cdd:COG3210    699 LNNAGNTLTISTGSITVTGQIgALANANGDTVTFGnlGTGATLTLNAGVT-ITSGNAGTLSIGLTANTTASGTTLTLANa 777
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1096 --NAITNLSISDHSVFKGERINIGNGAYSKNSISI----TGNSIFDFGSSQESTIGEGDYSQSLVTINDASVYGDGSLTL 1169
Cdd:COG3210    778 ngNTSAGATLDNAGAEISIDITADGTITAAGTTAInvtgSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGA 857
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1170 AKGNNSFAVLNLQDNAVTNANNISLATGLGSKAIVNVSNMNSGQFNPVSMGAGDGYAEVNFDGVNGYTLSTNFICMDSGS 1249
Cdd:COG3210    858 SGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTG 937
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1250 CADTVINVNRGTVSLSGTNDWKGQINVYDGTRLDARGNDAVDGILNVSKEAQVDFNGYSQHMTGIDNKGMIYLSDGSASS 1329
Cdd:COG3210    938 AGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVA 1017
                         1050      1060      1070      1080      1090      1100      1110
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2245374867 1330 DVYLDKDYVAHDGSGVQFGIFGQKEADVMHVKGDTSGSSGIVVTTNSKNKIKKGGDILLVEVNGDSSGSFYLNSLIKNG 1408
Cdd:COG3210   1018 GGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGG 1096
Hia COG5295
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ...
321-976 3.05e-10

Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 444098 [Multi-domain]  Cd Length: 785  Bit Score: 65.18  E-value: 3.05e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  321 TIGSGDGSITKFDIKNGSVVTSISDMTLAKGKGTQANINISSSQLNTGSLSVGEGDNADVTMTGSGASVSSKNTFTVAKG 400
Cdd:COG5295      1 SASNAGAVAAGTALTTVASGASTTASGSSATVTSAAQSTGSAATSSGSSSAAGGSGSTSSLTAAAATAGAGSGGTSATAA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  401 NNASAKLNYTDSTINIGSGYIGEGESAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGSSASV 480
Cdd:COG5295     81 SSVASGGASAATAASTGTGNTAGTAATVAGAASSGSATNAGASAGASAAAAAGSTAAAGGAAASTGGSSAAGGSNTATAT 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  481 DVKVTNAVLSAdslSLGGGEAAKVTMTGSGATVNSKNTFTVAKGNNASATLDYTDSKIDIGSGYIGEGEAAKTQLELNNS 560
Cdd:COG5295    161 GSSTANAATAA---AGATSTSASGSSSGASGAAAASAATGASAGGTASAAASASSSATGTSASVGVNAGAATGSAASAGG 237
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  561 ALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGNSASVDVKVTNAVLSADSLSLGGGEAAKVTMTGNRATISSG 640
Cdd:COG5295    238 SASAGAASGNATTASASSVSGSAVAAGTASTATTASTTAASGAAGTATAAAGGDAAAAGSASSTGAANATAGGGNAGSGG 317
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  641 NTFTVAKGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTlKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSI 720
Cdd:COG5295    318 GGAAALGSAGGSSGVGTASGASAAAATNDGTANGAGTSAA-ADATSGGGAGGGGAAATSSSGGSATAAGNAAGAAGAGSA 396
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  721 AQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGEKAQ 800
Cdd:COG5295    397 GSGGSSTGASAGGGASAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGGAANVGAATTAASAAA 476
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  801 TVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTG 880
Cdd:COG5295    477 TAAAATSSAAIAGATATGAGAAAGGAGAGAAGGAGSAAAGGAANAAAASGATATAGSAGGGAAAAAGGGSTTAATGTNSV 556
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  881 NGATISSGNTFTVAKGNNASATLDYSDSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIGKGSSTIANVSVGAGSNM 960
Cdd:COG5295    557 AVGNNTATGANSVALGAGSVASGANSVSVGAAGAENVAAGATDTDAVNGGGAVATGDNSVAVGNNAQASGANSVALGAGA 636
                          650
                   ....*....|....*.
gi 2245374867  961 LIKGNASIGVGDQAKA 976
Cdd:COG5295    637 TATANNSVALGAGSVA 652
PRK15319 PRK15319
fibronectin-binding autotransporter adhesin ShdA;
431-1306 1.65e-08

fibronectin-binding autotransporter adhesin ShdA;


Pssm-ID: 185219 [Multi-domain]  Cd Length: 2039  Bit Score: 60.10  E-value: 1.65e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  431 LELNNSALTASGKVFIGQGNTTQTNLTLNDkSSVNVSGE---MSVAQGSSASVDVKVTNAVLSADSLSLGGG-----EAA 502
Cdd:PRK15319   146 LELTDAKITTTGIYTQGISAADGSTLTLTD-STLTIDGNfgvMTLYTGSEATLDGTIVEAANSSSAQVQQGStlnvlDGS 224
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  503 KVTMTGSGATVNSKNTFTvakgnNASATLDYTDSKIDIGSGYIGEGEAAKTQLELNNSALTASgkvfigqgNTTQTNLTL 582
Cdd:PRK15319   225 TITLAQGQINVVAGNTAT-----DEGSTLNLSDSSVSSAGTMSTIQGTNKAALNLTNATITHT--------NASGAAVQA 291
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  583 NDKSSVNVSGEMSVAQG---NSASVDVKVTNAVLSADslslggGEAAKVTMTGNRATISSGNTFTVAKGNNASATLDYSD 659
Cdd:PRK15319   292 NNATTLDISGGNITSAGtgvYILASDARIDGATINAD------GDGIFITSKRKLTGYEDLNALTVSDANVTSDTVALHV 365
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  660 SKINIGngyigggekaQTVLTLKDSALAATGDVIMGQG---QETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNAD 736
Cdd:PRK15319   366 DGSTTI----------NDPIELTDSTFTAPTAIKLGSKatiQAENTTLTGNIVQTDASSSSLSLSQGSTLTGSVDAMFTT 435
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  737 LSANSMSI-------------GEGDTAAVTMTGN-GATISSSNTFTVARGNNASATLDYSDSKINIgngyigggeKAQTV 802
Cdd:PRK15319   436 LSLDDTSQwnmtdpstvgnltNDGDITLGNASGStGTLLTVDNTLTLQDGSQINATLDTANSSPII---------KAANV 506
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  803 LTLKDSALAATGDVIMGQGQETQTDLTL-SPQSSIKVS-GNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTG 880
Cdd:PRK15319   507 TLDGTLNLSSTATFVAPETDEHFGSITLiDSQTAITTDfDSVTLDADTSAMPDYLTINAGVDANDNTNYELSTGLSWYAG 586
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  881 NGATISSGNTFTVAKGNNASATLDYSDSKINIG-NGYVGVGEKSHTLL-----------KLDNSTFHAAGNIDIGKGSST 948
Cdd:PRK15319   587 ANSARAAHGTFTVDAGSTFTVTSELDETTATSNwNGSKLTKQGDGTLIlsntgndygdtEIDGGILAAKDAAALGTGDVT 666
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  949 IANVSVGAGSNMLIKGNASiGVGDQAKakfSVKDSVLNIGGSLVLGQGNSTEAEMSVEHSQLYSGGlllGTANNAVVSMS 1028
Cdd:PRK15319   667 IAESATLALSQGTLDNNVT-GEGQIVK---SGSDELIVTGDNNYSGGTTISGGTLTADHADSLGSG---DVDNSGVLKVG 739
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1029 ANNSEISVVGDYTVAKGDGSEATLIYKNsDINLGNGILGAGSGVKTDLSLDNSKFVASDGIIIGKGDnaITNLSISDHSV 1108
Cdd:PRK15319   740 EGELENILSGSGSLVKTGTGELTLSGDN-TYSGGTTITGGTLTADHADSLGSGDIDNSGVLKVGEGD--LENTLSGSGSL 816
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1109 FK---GERINIGNGAYSKNSISITGNSIFDFGSSQES---------TIGEGDYSQSLVTINDASVYGDGSLTLaKGNNSF 1176
Cdd:PRK15319   817 VKtgtGELTLSGGNDYSGGTTIIGGTLTADHADSLGSgdidnsgvlQVGEGELKNTLFGSGSLVKTGTGELTL-NGDNDY 895
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1177 AVLNLQDNAVTNANNISLatgLGSKAIVN--VSNMNSGQFNPVSMGAGD----GYAEVNFDGVNGYTLSTNFI------- 1243
Cdd:PRK15319   896 SGGTTIDDGVLIADHADS---LGTGAVANsgVLQVGEGELKNTLSGSGSlvktGTGELTLSGDNSYSGGTTIIggtliad 972
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1244 ---CMDSGSCADT-------------------VINVNRGTVSLSGTNDWKGQINVYDGTRLDARGNDAVDGILNVSKEAQ 1301
Cdd:PRK15319   973 hadSLGTGAVANSgvlqvgegelentlsgsgsLVKTGTGELTLGGDNSYSGDTTIADGTLIAANVNALGSGNIDNSGTLM 1052

                   ....*
gi 2245374867 1302 VDFNG 1306
Cdd:PRK15319  1053 LDANG 1057
Hia COG5295
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ...
558-1202 5.28e-08

Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 444098 [Multi-domain]  Cd Length: 785  Bit Score: 57.86  E-value: 5.28e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  558 NNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGNSASVDVKVTNAVLSADSLSLGGGEAAKVTMTGNR-AT 636
Cdd:COG5295      1 SASNAGAVAAGTALTTVASGASTTASGSSATVTSAAQSTGSAATSSGSSSAAGGSGSTSSLTAAAATAGAGSGGTSAtAA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  637 ISSGNTFTVAKGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSG 716
Cdd:COG5295     81 SSVASGGASAATAASTGTGNTAGTAATVAGAASSGSATNAGASAGASAAAAAGSTAAAGGAAASTGGSSAAGGSNTATAT 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  717 NMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGG 796
Cdd:COG5295    161 GSSTANAATAAAGATSTSASGSSSGASGAAAASAATGASAGGTASAAASASSSATGTSASVGVNAGAATGSAASAGGSAS 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  797 EKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAV 876
Cdd:COG5295    241 AGAASGNATTASASSVSGSAVAAGTASTATTASTTAASGAAGTATAAAGGDAAAAGSASSTGAANATAGGGNAGSGGGGA 320
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  877 TMTGNGATISSGNTFTVAKGNNASATLDYSDSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIGKGSSTIAN----- 951
Cdd:COG5295    321 AALGSAGGSSGVGTASGASAAAATNDGTANGAGTSAAADATSGGGAGGGGAAATSSSGGSATAAGNAAGAAGAGSagsgg 400
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  952 VSVGAGSNMLIKGNASIGVGDQAKAKFSVKDSVLNIGGSLVLGQGNSTEAEMSVEHSQLYSGGLLLGTANNAVVSMSANN 1031
Cdd:COG5295    401 SSTGASAGGGASAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGGAANVGAATTAASAAATAAA 480
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1032 SEISVVGDYTVAKGDGSEATLIYKNSDINLGNGILGAGSGVKTDLSLDNSKFVASDGIIIGKGDNAITNLSISDHSVFKG 1111
Cdd:COG5295    481 ATSSAAIAGATATGAGAAAGGAGAGAAGGAGSAAAGGAANAAAASGATATAGSAGGGAAAAAGGGSTTAATGTNSVAVGN 560
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1112 ERINIGNGAYSKNSISITGNSIFDFGSSQESTIGEGDYSQSLVTINDASVYGDGSLTLAKGNNSFAVLNLQ-DNAVTNAN 1190
Cdd:COG5295    561 NTATGANSVALGAGSVASGANSVSVGAAGAENVAAGATDTDAVNGGGAVATGDNSVAVGNNAQASGANSVAlGAGATATA 640
                          650
                   ....*....|..
gi 2245374867 1191 NISLATGLGSKA 1202
Cdd:COG5295    641 NNSVALGAGSVA 652
Hia COG5295
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ...
273-906 1.09e-07

Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 444098 [Multi-domain]  Cd Length: 785  Bit Score: 57.09  E-value: 1.09e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  273 IGSKSNISVSAASGSSISSTGDFTVATGNNSNAKLELDASNLSVNGVSTIGSGDGSITKFDIKNGSVVTSISDMTLAKGK 352
Cdd:COG5295      1 SASNAGAVAAGTALTTVASGASTTASGSSATVTSAAQSTGSAATSSGSSSAAGGSGSTSSLTAAAATAGAGSGGTSATAA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  353 GTQANINISSSQLNTGSLSVGEGDNADVTMTGSGASVSSKNTFTVAKGNNASAKLNYTDSTINIGSGYIGEGESAKTQLE 432
Cdd:COG5295     81 SSVASGGASAATAASTGTGNTAGTAATVAGAASSGSATNAGASAGASAAAAAGSTAAAGGAAASTGGSSAAGGSNTATAT 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  433 LNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGSSASVDVKVTNAVLSADSLSLGGGEAAKVTMTGSGAT 512
Cdd:COG5295    161 GSSTANAATAAAGATSTSASGSSSGASGAAAASAATGASAGGTASAAASASSSATGTSASVGVNAGAATGSAASAGGSAS 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  513 ---VNSKNTFTVAKGNNASATLDYTDSKIDIGSGYIGEGEAAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVN 589
Cdd:COG5295    241 agaASGNATTASASSVSGSAVAAGTASTATTASTTAASGAAGTATAAAGGDAAAAGSASSTGAANATAGGGNAGSGGGGA 320
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  590 VSGEM-------SVAQGNSASVDVKVTNAVLSADSLSLGGGEAAKVTMTGNRATISSGNTFTVAKGNNASATLDYSDSKI 662
Cdd:COG5295    321 AALGSaggssgvGTASGASAAAATNDGTANGAGTSAAADATSGGGAGGGGAAATSSSGGSATAAGNAAGAAGAGSAGSGG 400
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  663 NIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSM 742
Cdd:COG5295    401 SSTGASAGGGASAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGGAANVGAATTAASAAATAAA 480
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  743 SIGEGDTAAVTMTGNGATISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQ 822
Cdd:COG5295    481 ATSSAAIAGATATGAGAAAGGAGAGAAGGAGSAAAGGAANAAAASGATATAGSAGGGAAAAAGGGSTTAATGTNSVAVGN 560
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  823 ETQT-DLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSGNtfTVAKGNNASA 901
Cdd:COG5295    561 NTATgANSVALGAGSVASGANSVSVGAAGAENVAAGATDTDAVNGGGAVATGDNSVAVGNNAQASGAN--SVALGAGATA 638

                   ....*
gi 2245374867  902 TLDYS 906
Cdd:COG5295    639 TANNS 643
auto_AIDA-I NF033176
autotransporter adhesin AIDA-I;
1314-1622 1.80e-07

autotransporter adhesin AIDA-I;


Pssm-ID: 380183 [Multi-domain]  Cd Length: 1287  Bit Score: 56.59  E-value: 1.80e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1314 IDNKGMIYLSDGSASSDVYLDKDYVAHDGSGVQFGIFGQKE---ADVMHVKGDTSGSSGIVVTTNSKNKIKKGGDILLVE 1390
Cdd:NF033176   834 VNNKNIILNPTKESAGNTLTVSNYTGTPGSVISLGGVLEGDnslTDRLVVKGNTSGQSDIVYVNEGGSGGQTIEGINIIS 913
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1391 VNGDSSGSFYLNslikngkeykvtgDYIDVGAWEYALNK------KRKNWYLSVDM--------RPEPGAFINNSKSMLD 1456
Cdd:NF033176   914 VEGNSDAEFSLK-------------NRVVAGAYDYTLQKgnvsgtDKKGWYLTSHLptsdtrqyRPENGSYATNMALANS 980
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1457 MFALqryDIPGQHRYPTLFENLY--NNGMWIQINNNSGSNSEVYDNLKTSYSLNTMMIGGDIYNW-TDGYNYSHIGIMGG 1533
Cdd:NF033176   981 LFLM---DLNERKQFSAVNDNTQpeSASVWMKITGGRTSGKLSDGQNKTTTNQFINQLGGDIYKYhAEKLGDFTLGIMGG 1057
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1534 MGSAANKTTS-TNNKRATGNVDGYTLGLYHVFQQNisdGLNESerqGLWTYSSIQYMDYDNSVSSTNNFKADYGVNGFRL 1612
Cdd:NF033176  1058 YANAKGKTINhTSKKGARNTLDGYSAGLYGTWYQN---GANAT---GLFAETWMQYNWFNASVKGDGLEEEKYNLNGLTA 1131
                          330
                   ....*....|
gi 2245374867 1613 TGEVGYLKNI 1622
Cdd:NF033176  1132 SVGGGYNLNV 1141
Hia COG5295
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ...
137-782 1.33e-06

Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 444098 [Multi-domain]  Cd Length: 785  Bit Score: 53.24  E-value: 1.33e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  137 SNGSLKINNGSNVFVVSSQDDTPFKTNPVKWNQNIISQGNNITDGTVSSGDLVLGKTGNGIIDIDNNSKLDVKNDVVVST 216
Cdd:COG5295      2 ASNAGAVAAGTALTTVASGASTTASGSSATVTSAAQSTGSAATSSGSSSAAGGSGSTSSLTAAAATAGAGSGGTSATAAS 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  217 GVDGIPNEKPSVINIKNGSNFLIHGDMKGGISAAGQLelNMDNSSNLRVDKSIAVGIGSKSNISVSAASGSSISSTGDFT 296
Cdd:COG5295     82 SVASGGASAATAASTGTGNTAGTAATVAGAASSGSAT--NAGASAGASAAAAAGSTAAAGGAAASTGGSSAAGGSNTATA 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  297 VATGNNSNAKLELDASNLSVNGVSTIGSGDGSITKFDIKNGSVVTSISDMTLAKGKGTQANINISSSQLNTGSLSVGEGD 376
Cdd:COG5295    160 TGSSTANAATAAAGATSTSASGSSSGASGAAAASAATGASAGGTASAAASASSSATGTSASVGVNAGAATGSAASAGGSA 239
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  377 NADVTMTGSGASVSSKNTFTVAKGNNASAKLNYTDSTINIGSGYIGEGESAKTQLELNNSALTASGKVFIGQGNTTQTNL 456
Cdd:COG5295    240 SAGAASGNATTASASSVSGSAVAAGTASTATTASTTAASGAAGTATAAAGGDAAAAGSASSTGAANATAGGGNAGSGGGG 319
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  457 TLNDKSSVNVSGEMSvAQGSSASVDVKVTNAVLSADSLSLGGGEAAKVTMTGSGATVNSKNTFTVAKGNNASATLDYTDS 536
Cdd:COG5295    320 AAALGSAGGSSGVGT-ASGASAAAATNDGTANGAGTSAAADATSGGGAGGGGAAATSSSGGSATAAGNAAGAAGAGSAGS 398
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  537 KIDIGSGYIGEGEAAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGNSASVDVKVTNAVLSAD 616
Cdd:COG5295    399 GGSSTGASAGGGASAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGGAANVGAATTAASAAATA 478
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  617 SLSLGGGEAAKVTMTGNRATISSGNTFTVAKGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQ 696
Cdd:COG5295    479 AAATSSAAIAGATATGAGAAAGGAGAGAAGGAGSAAAGGAANAAAASGATATAGSAGGGAAAAAGGGSTTAATGTNSVAV 558
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  697 GQETQT-DLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSSNtfTVARGNNA 775
Cdd:COG5295    559 GNNTATgANSVALGAGSVASGANSVSVGAAGAENVAAGATDTDAVNGGGAVATGDNSVAVGNNAQASGAN--SVALGAGA 636

                   ....*..
gi 2245374867  776 SATLDYS 782
Cdd:COG5295    637 TATANNS 643
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
233-646 1.71e-05

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 49.94  E-value: 1.71e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  233 NGSNFLIHGDMKGGISAAGQLELNMDNSSNLRVDKSIAVGIGSKSNISVSAASGSSISSTGDFTVATGNNSNAKLELDAS 312
Cdd:COG3468     13 GGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNSTGGG 92
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  313 NLSVNGVSTIGSGDGSITKFDIKNGSVVTSISDMTLAKGKGTQANINISSSQLNTGSLSVGEGDNADVTMTGSGASVSSK 392
Cdd:COG3468     93 GGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGGGGSGGGG 172
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  393 NTFTVAKGNNASAKLNYTDSTINIGSGYIGEGESAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSV 472
Cdd:COG3468    173 GAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGSAGGTGGGG 252
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  473 AQGSSASVDVKVTNAVLSADSLSLGGGEAAKVTMTGSGATVNSKNTFTVAKGNNASATLDYTDSKIDIGSGYIGEGEAAK 552
Cdd:COG3468    253 LTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGGGSGGGGGG 332
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  553 TQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGNSASVDVKVTNAVLSADSLSLGGGEAAKVTMTG 632
Cdd:COG3468    333 GGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGNNGGGGVGGGG 412
                          410
                   ....*....|....
gi 2245374867  633 NRATISSGNTFTVA 646
Cdd:COG3468    413 GGGLTLTGGTLTVN 426
Autotransporter pfam03797
Autotransporter beta-domain; Secretion of protein products occurs by a number of different ...
1483-1646 2.34e-05

Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C terminus of the proteins it occurs in. The N terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.


Pssm-ID: 461054 [Multi-domain]  Cd Length: 255  Bit Score: 47.76  E-value: 2.34e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1483 MWIQINNNSGSNSEVYDNLKTSYSLNTMMIGGDIY---NWtdgynysHIGIMGGMGSAankTTSTNNKRATGNVDGYTLG 1559
Cdd:pfam03797    1 VWARGFGGRGKQDGDGGAAGYDADTGGLQVGADYRlgdNL-------RLGVAFGYSRS---DADVDGRGGSGDSDSYSLG 70
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1560 LYHVFQQNisdglneserQGLWTYSSIQYMDYDNSVSSTNNF-------KADYGVNGFRLTGEVGYLKNIGGiqpsDFYV 1632
Cdd:pfam03797   71 LYGTYYGD----------GGWYLDGGLGYGWHDNDTRRSVDLggfsetaKGDYDGNGFGASLEAGYRFALGG----GWTL 136
                          170
                   ....*....|....
gi 2245374867 1633 EPKLYLSHTELSGG 1646
Cdd:pfam03797  137 EPFAGLAYVRLRLD 150
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
337-770 1.97e-04

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 46.48  E-value: 1.97e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  337 GSVVTSISDMTLAKGKGTQANINISSSQLNTGSLSVGEGDNADVTMTGSGASVSSKNTFTVAKGNNASAKLNYTDSTINI 416
Cdd:COG3468     11 GLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNSTG 90
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  417 GSGYIGEGESAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGSSASVDVKVTNAVLSADSLSL 496
Cdd:COG3468     91 GGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGGGGSGG 170
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  497 GGGEAAKVTMTGSGATVNSKNTFTVAKGNNASATLDYTDSKIDIGSGYIGEGEAAKTQLELNNSALTASGKVFIGQGNTT 576
Cdd:COG3468    171 GGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGSAGGTGG 250
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  577 QTNLTLNDKSSVNVSGEMSVAQGNSASVDVKVTNAVLSADSLSLGGGEAakvTMTGNRATISSGNTFTVAKGNNASATLD 656
Cdd:COG3468    251 GGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGT---ASTGGGGGGGGGNGGGGGGGSNAGGGSG 327
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  657 YSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSpqssikvsgnmsiaqGNAASAKVIVDNAD 736
Cdd:COG3468    328 GGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGG---------------AGGGGANTGSDGVG 392
                          410       420       430
                   ....*....|....*....|....*....|....
gi 2245374867  737 LSANSMSIGEGDTAAVTMTGNGATISSSNTFTVA 770
Cdd:COG3468    393 TGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTVN 426
PRK15319 PRK15319
fibronectin-binding autotransporter adhesin ShdA;
299-1314 2.24e-04

fibronectin-binding autotransporter adhesin ShdA;


Pssm-ID: 185219 [Multi-domain]  Cd Length: 2039  Bit Score: 46.23  E-value: 2.24e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  299 TGNNSNAKLELDASNLSVNGV--STIGSGDGSItkfDIKNGSVVtsisdMTLAKGKGTQAN----INISSSQLNTGSLSV 372
Cdd:PRK15319   240 TATDEGSTLNLSDSSVSSAGTmsTIQGTNKAAL---NLTNATIT-----HTNASGAAVQANnattLDISGGNITSAGTGV 311
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  373 ------GEGDNADVTMTGSGASVSSKNTFTVAKGNNAsAKLNYTDSTINIGSGYIGEGESAKTQLELNNSALTASGKVFI 446
Cdd:PRK15319   312 yilasdARIDGATINADGDGIFITSKRKLTGYEDLNA-LTVSDANVTSDTVALHVDGSTTINDPIELTDSTFTAPTAIKL 390
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  447 GQGNTTQ---TNLTLNDKSSVNVSGEMSVAQGSSASVDVKVTNAVLSADSLSL--------------GGGEAAKVTMTGS 509
Cdd:PRK15319   391 GSKATIQaenTTLTGNIVQTDASSSSLSLSQGSTLTGSVDAMFTTLSLDDTSQwnmtdpstvgnltnDGDITLGNASGST 470
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  510 GATVNSKNTFTVAKGNNASATLDYTDSKIDIGSGYIgegeAAKTQLELNNSALTASGKVFIGQGNTT----QTNLTlNDK 585
Cdd:PRK15319   471 GTLLTVDNTLTLQDGSQINATLDTANSSPIIKAANV----TLDGTLNLSSTATFVAPETDEHFGSITlidsQTAIT-TDF 545
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  586 SSVNVSGEMSVAQGN---SASVDVK-VTNAVLSADSLSLGGGEAAKVTMtgNRATISSGNTFTV-AKGNNASATLDYSDS 660
Cdd:PRK15319   546 DSVTLDADTSAMPDYltiNAGVDANdNTNYELSTGLSWYAGANSARAAH--GTFTVDAGSTFTVtSELDETTATSNWNGS 623
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  661 KI----------NIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQG-----QETQTDLTLSPQSSIKVSGN--MSIAQG 723
Cdd:PRK15319   624 KLtkqgdgtlilSNTGNDYGDTEIDGGILAAKDAAALGTGDVTIAESatlalSQGTLDNNVTGEGQIVKSGSdeLIVTGD 703
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  724 NAASAKVIVDNADLSAN---SMSIGEGDTAAVTMTGNGA---TISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGE 797
Cdd:PRK15319   704 NNYSGGTTISGGTLTADhadSLGSGDVDNSGVLKVGEGElenILSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTLTAD 783
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  798 KAQTvltLKDSALAATGDVIMGQGqETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSM-SIGEGDTAAV 876
Cdd:PRK15319   784 HADS---LGSGDIDNSGVLKVGEG-DLENTLSGSGSLVKTGTGELTLSGGNDYSGGTTIIGGTLTADHAdSLGSGDIDNS 859
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  877 ------------TMTGNGATISSGNTFTVAKGNNasatlDYSDSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIGK 944
Cdd:PRK15319   860 gvlqvgegelknTLFGSGSLVKTGTGELTLNGDN-----DYSGGTTIDDGVLIADHADSLGTGAVANSGVLQVGEGELKN 934
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  945 GSSTIANVSVGAGSNMLIKGNASIGVGDQAKAKFSVKDSVLNIGGSLVLGQGNSTEAEMSVEHSQLYSGGLLlgTANNAV 1024
Cdd:PRK15319   935 TLSGSGSLVKTGTGELTLSGDNSYSGGTTIIGGTLIADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLV--KTGTGE 1012
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1025 VSMSANNSeisVVGDYTVAKG---------------DGSEATLIYKNSDINLGNGIL--GAGSGVKTDLSLDNSKFVASD 1087
Cdd:PRK15319  1013 LTLGGDNS---YSGDTTIADGtliaanvnalgsgniDNSGTLMLDANGAFELANITThsGATTALAAGSTLDAGQLTQED 1089
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1088 GIIIGKGDNAITnlsisDHSVFKGERINIGNgaysknSISITGnsifdFGSSQESTIGEGdYSQSLVTINDASVYGDGSL 1167
Cdd:PRK15319  1090 GSTLSIDLGAAT-----DDAVITADSVTLGG------TLNVTG-----IGSVTDSWTPEA-YTYTLIDSDSAITSDFDDL 1152
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1168 TLAKGNNSFAVLNLQDNAVTNANNISLATGLGSKAIVNVSNMNSGQFNPVSMGAGDGYAEVnfdgvnGYTLSTNFICMDS 1247
Cdd:PRK15319  1153 TIAGMNREDVDFLTIDGKVDEADNTHYDLTASLSWYADRDNATTDAHGTFTLSDPDGSFNV------AATLTDVDDTLDP 1226
                         1050      1060      1070      1080      1090      1100
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2245374867 1248 GSCAD--TVINVNRGTVSLSGTNDWKGQINVYDGTRLDARGNDAVDGILNVSKEAQVDFNGYSQHMTGI 1314
Cdd:PRK15319  1227 GSRWDgkSLTKEGAGTLILSGDNDYSGGTTINEGTLVAASTTALGTGLVDNNATLVLDADGEVSAVGGI 1295
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
595-1041 3.88e-04

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 45.32  E-value: 3.88e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  595 SVAQGNSASVDVKVTNAVLSADSLSLGGGEAAKVTMTGNRATISSGNTFTVAKGNNASATLDYSDSKINIGNGYIGGGEK 674
Cdd:COG3468      1 TASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAG 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  675 AQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTM 754
Cdd:COG3468     81 SGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGG 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  755 TGNGATISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETqtdltlspqs 834
Cdd:COG3468    161 TGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGS---------- 230
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  835 sikVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSGNTFTVAKGNNASATLDYSDSKINIGN 914
Cdd:COG3468    231 ---GGNTGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGG 307
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  915 GYVGVGEKSHTLLKLDNSTFHAAGNIDIGKGSSTIANVSVGAGSNMLIKGNASIGVGDQAKAKFSVKDSVLNIGGSLVLG 994
Cdd:COG3468    308 GGGGNGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTG 387
                          410       420       430       440
                   ....*....|....*....|....*....|....*....|....*..
gi 2245374867  995 QGNSTeaemSVEHSQLYSGGLLLGTANNAVVSMSANNSEISVVGDYT 1041
Cdd:COG3468    388 SDGVG----TGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTVNGNYT 430
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
447-972 7.03e-04

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 44.38  E-value: 7.03e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  447 GQGNTTQTNLTLNDKSSVNVSGEMSVAQGSSASVDVKVTNAVLSADSLSLGGGEAAKVTMTGSGATVNSKNTFTVAKGNN 526
Cdd:COG4625      3 GGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGG 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  527 ASATLDYTDSKIDIGSGYIGEGEAAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGNSASVDV 606
Cdd:COG4625     83 GGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGG 162
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  607 KVTNAVLSADSLSLGGGEAAKVTMTGNRATISSGNTFTVAKGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSAL 686
Cdd:COG4625    163 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGG 242
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  687 AATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSSNT 766
Cdd:COG4625    243 GGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 322
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  767 FTVARGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQ 846
Cdd:COG4625    323 GGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGG 402
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  847 GNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSGNTFTVAKGNNASATLDYSDSKINIGNGYVGVGEKSHTL 926
Cdd:COG4625    403 GGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNN 482
                          490       500       510       520
                   ....*....|....*....|....*....|....*....|....*.
gi 2245374867  927 LKLDNSTFHAAGNIDIGKGSSTIANVSVGAGSNMLIKGNASIGVGD 972
Cdd:COG4625    483 TYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGTATLNGGT 528
PRK15319 PRK15319
fibronectin-binding autotransporter adhesin ShdA;
293-1656 1.09e-03

fibronectin-binding autotransporter adhesin ShdA;


Pssm-ID: 185219 [Multi-domain]  Cd Length: 2039  Bit Score: 44.30  E-value: 1.09e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  293 GDFTVATGNNSNAKLELD--ASNLSVNGVSTIGSGDGSITKFDIKNGSVVTSISDMTLA-KGKGTQANINISSSQLNTGS 369
Cdd:PRK15319   595 GTFTVDAGSTFTVTSELDetTATSNWNGSKLTKQGDGTLILSNTGNDYGDTEIDGGILAaKDAAALGTGDVTIAESATLA 674
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  370 LSVGEGDNadvTMTGSGASVSSKNTFTVAKGNNasaklNYTDSTiNIGSGYIgegeSAKTQLELNNSALTASGKVFIGQG 449
Cdd:PRK15319   675 LSQGTLDN---NVTGEGQIVKSGSDELIVTGDN-----NYSGGT-TISGGTL----TADHADSLGSGDVDNSGVLKVGEG 741
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  450 nTTQTNLTLNDKSSVNVSGEMSVAQGSSASVDVKVTNAVLSADSL-SLGGGEA------------AKVTMTGSGATVNS- 515
Cdd:PRK15319   742 -ELENILSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTLTADHAdSLGSGDIdnsgvlkvgegdLENTLSGSGSLVKTg 820
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  516 KNTFTVAKGNNASATLDYTDSKI------DIGSGYI-GEGEAAKTQLELNNSALTASGKVFIGQGNttqtnLTLNDKSSV 588
Cdd:PRK15319   821 TGELTLSGGNDYSGGTTIIGGTLtadhadSLGSGDIdNSGVLQVGEGELKNTLFGSGSLVKTGTGE-----LTLNGDNDY 895
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  589 NVSGEMSVAQGNSASVDVKVTNAVLSADSLSLGGGEAaKVTMTGNRATISSGNTFTVAKGNNasatlDYSDSKINIGNGY 668
Cdd:PRK15319   896 SGGTTIDDGVLIADHADSLGTGAVANSGVLQVGEGEL-KNTLSGSGSLVKTGTGELTLSGDN-----SYSGGTTIIGGTL 969
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  669 IgggekAQTVLTLKDSALAATGDVIMGQGqETQTDLTLSPQSSIKVSGNMSIAQGNAASA-KVIVDNADLSANSMSIGEG 747
Cdd:PRK15319   970 I-----ADHADSLGTGAVANSGVLQVGEG-ELENTLSGSGSLVKTGTGELTLGGDNSYSGdTTIADGTLIAANVNALGSG 1043
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  748 D---TAAVTMTGNGA------TISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGEKAqtVLTLKDSALAAT----- 813
Cdd:PRK15319  1044 NidnSGTLMLDANGAfelaniTTHSGATTALAAGSTLDAGQLTQEDGSTLSIDLGAATDDA--VITADSVTLGGTlnvtg 1121
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  814 -GDVIMGQGQETQTDLTLSPQSSIKVS-GNMSIAQGNAasakvivDNADLSANSMSIGEGDTAAVTMTG--------NGA 883
Cdd:PRK15319  1122 iGSVTDSWTPEAYTYTLIDSDSAITSDfDDLTIAGMNR-------EDVDFLTIDGKVDEADNTHYDLTAslswyadrDNA 1194
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  884 TISSGNTFTVAK---GNNASATLDYSDSKINIGNGYVGvgeksHTLLKLDNSTFHAAGNIDIGKGSSTIANVSVGAGSNM 960
Cdd:PRK15319  1195 TTDAHGTFTLSDpdgSFNVAATLTDVDDTLDPGSRWDG-----KSLTKEGAGTLILSGDNDYSGGTTINEGTLVAASTTA 1269
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  961 LIKGNasigVGDQAKAKFSVKDSVLNIGGsLVLGQGNSTEAEMsvehsqlysgGLLLGTANNAVVSMSANNSEISVVGDY 1040
Cdd:PRK15319  1270 LGTGL----VDNNATLVLDADGEVSAVGG-ITTHSGATTQLAL----------GTSLDLGDSALIQQDGSTLNVELNSDS 1334
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1041 TVAKGDGSEATLiykNSDINLGNGILGAGSgvkTDLSLDNSKFVASDGIIIGKGDNAITNLSISDHSVFKGERINIGNGA 1120
Cdd:PRK15319  1335 VQPLITGGSATL---GGDLVVSDASLQARA---SDAEFQSFKLMDMDSDISGDFTSLTMNLTDQPDYLTVTGTINPEDAS 1408
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1121 YSKNSISITGNSIFDFGSSQEST--IGEGDYSQSLVTINDASVYGD-----------GSLTLAKGNNSFAVLNLQDNAVT 1187
Cdd:PRK15319  1409 EYLLTEGLSWNATATSATPAHGTftLGAGDSFEVTSVLGDKTGNGDwdgksltklgaGKLTLSGANTYTGDTNVQEGTLW 1488
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1188 NANNISLATgLGSKAIVNVSnmnsgqfnpvsmgAGDGYAEVNFDGVNGYTLSTNFICMDSGSCADTVIN-----VNRGTV 1262
Cdd:PRK15319  1489 LSGDGSIGE-MGSQQAVNVA-------------SGATFGGSNGTTVNGKVTNEGTLVFGDSEETGAIFTlngdlINMGTM 1554
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1263 SLSGTNDWKGQINVYDGTRLDARGNDAVDGILNVSKEAqvdfngysqhmtgidNKGMIYLSDGSASSDVYLDKdyvAHDG 1342
Cdd:PRK15319  1555 TSGSSSSTPGNTLYVDGNYTGNGGSLYLNTVLGDDDSA---------------TDKLVITGDASGTTDLYING---IGDG 1616
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1343 SGVQFGI-----FGQKEADVMHVKGDTSGS-------------SGIVVTTNSKNKIKKGGDILLVEvNGDSSGSFYLNSL 1404
Cdd:PRK15319  1617 AQTTNGIevvdvGGVSTSDAFELKNEVNAGlytyrlywnesdnDWYLASKAQSDDDDSGGDDTPSD-GGDDGGNVTPPDD 1695
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1405 IKNGKEYKVTGDYIDVGAweyaLNKKRKNWYLSVDMRPEPGAFINNSKSMLDMFALQRYDIPG-QHRYPtlfenlyNNGM 1483
Cdd:PRK15319  1696 GGDGGNVTPPDDGGDGGD----VTPPDHGGDVAPQYRADIGAYMGNQWMARNLQMQTLYDREGsQYRNA-------DGSV 1764
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1484 WIQINNNSGSNSEVYDNLKTSYSLNTMMIGGDIYNWTDGYNYSHIGIMGGMGSAanKTTSTNNKRA-------TGNVDGY 1556
Cdd:PRK15319  1765 WARFKAGKAESEAVSGNIDMDSNYSQFQLGGDILAWGNGQQSVTVGVMASYINA--DTDSTGNRGAdgsqftsSGNVDGY 1842
                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1557 TLGLYHVFqqnISDGLNESerqGLWTYSSIQYMDYDNSVSSTNNFKADYGVNGFRLTGEVGYLKNIGGIQPSDFYVEPKL 1636
Cdd:PRK15319  1843 NLGVYATW---FADAQTHS---GAYVDSWYQYGFYNNSVESGDAGSESYDSTANAVSLETGYRYDIALSNGNTVSLTPQA 1916
                         1450      1460
                   ....*....|....*....|
gi 2245374867 1637 YLSHTELSGGVVEDLQGGKI 1656
Cdd:PRK15319  1917 QVVWQNYSADSVKDNYGTRI 1936
PL2_Passenger_AT cd01344
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of ...
1260-1437 1.21e-03

Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of the nonprotease autotransporters, Ag43, AIDA-1 and IcsA, as well as, the less characterized ShdA, MisL, and BapA autotransporters.


Pssm-ID: 238654 [Multi-domain]  Cd Length: 188  Bit Score: 41.90  E-value: 1.21e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1260 GTVSLSGTNDWKGQINVyDGTRLDARGNDAVDGILNVSKEAQVDFNGYSQ---------HMTGIDNKGMIYLSDGSASSD 1330
Cdd:cd01344      1 GTITGNGGWKLGGDLTL-GGGALTLTTSLTLTGTLLTGGAGTLTLDSTSTwnitgtstlNVGNLTNAGTIDLGNGSPAGG 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1331 VYL-DKDYVAHDGSGVQFGIFGQKEA--DVMHVKGDTSGSSGIVVT--TNSKNKIKKGgdILLVEVNGDSS-GSFYLNSl 1404
Cdd:cd01344     80 TLTiTGNYTGNGGTLRLNTVLGDDDSptDRLVIDGDASGTTRVAVNnaGGSGATTGNG--IEVVEVGGTSSnGAFSLAG- 156
                          170       180       190
                   ....*....|....*....|....*....|....*...
gi 2245374867 1405 ikngkeykvtgdYIDVGAWEYALNKKR-----KNWYLS 1437
Cdd:cd01344    157 ------------RVVAGAYEYRLYRGGvsgndGNWYLR 182
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
245-724 1.49e-03

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 43.61  E-value: 1.49e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  245 GGISAAGQLELNMDNSSNLRVDKSIAVGIGSKSNISVSAASGSSISSTGDFTVATGNNSNAKLELDASNLSVNGVSTIGS 324
Cdd:COG4625     49 GAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGG 128
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  325 GDGSITKFDIKNGSVVTSISDMTLAKGKGTQANINISSSQLNTGSLSVGEGDNADVTMTGSGASVSSKNTFTVAKGNNAS 404
Cdd:COG4625    129 AGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGG 208
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  405 AKLNYTDSTINIGSGYIGEGESAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGSSASVDVKV 484
Cdd:COG4625    209 GGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSG 288
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  485 TNAVLSADSLSLGGGEAAKVTMTGSGATVNSKNTFTVAKGNNASATLDYTDSKIDIGSGYIGEGEAAKTQLELNNSALTA 564
Cdd:COG4625    289 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGG 368
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  565 SGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGNSASVDVKVTNAVLSADSLSLGGGEAAKVTMTGNRATISSGNTFT 644
Cdd:COG4625    369 GGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGG 448
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  645 VAKGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGN 724
Cdd:COG4625    449 GGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGTATLNGGT 528
Autotransporter smart00869
Autotransporter beta-domain; Secretion of protein products occurs by a number of different ...
1482-1758 1.85e-03

Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type IV pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different peptidase is used and in some cases no cleavage occurs.


Pssm-ID: 214872 [Multi-domain]  Cd Length: 268  Bit Score: 42.17  E-value: 1.85e-03
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  1482 GMWIQINNNSGSNSEVYDnlktsYSLNTMMIGGDIYNWTDGYnySHIGIMGGMGSAANKTTSTNNkRATGNVDGYTLGLY 1561
Cdd:smart00869    5 GGFLRQDSSGSGGSAGFD-----YDSYGLQLGADYRLSDNGN--LSLGFAAGYGNSKVDFSGNKG-SGKGDVDSYGLGLY 76
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  1562 HVFQQNisdglneserQGLWTYSSIQYMDYDNSVSSTNNF------KADYGVNGFRLTGEVGYLKNIGGiqpsDFYVEPK 1635
Cdd:smart00869   77 AGYSLG----------NGLYLDAQLGYGRSDNDTKRKVTLggagraKGSYDGTGYGASLEAGYRFYLGG----GLTLTPF 142
                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  1636 LYLSHTEL-------SGGVVEDLQGGKITYPNSLTIIepGVFFSYRKTHESTSNDEAmfkdYIKQSVVDVWFGGGYSFKT 1708
Cdd:smart00869  143 AGLAYSRVrqdgfteSGGGAFGLSVDSQSLDSLSLPL--GLRLEYRLALGDGATLTP----YLRLAYVHDFYDDNPVVTA 216
                           250       260       270       280       290
                    ....*....|....*....|....*....|....*....|....*....|
gi 2245374867  1709 GNYSRTNFDSDMVEYNTSDNFVLKSGVEFEFLKDARLLLSSSYSINNDRN 1758
Cdd:smart00869  217 SLLGSGASFTTSGTDLDRNAAELGLGLSAKLSNGLSLSLNYDGEFGGSSR 266
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
534-962 2.50e-03

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 42.63  E-value: 2.50e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  534 TDSKIDIGSGYIGEGEAAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGNSASVDVKVTNAVL 613
Cdd:COG3468      3 SGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSG 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  614 SADSLSLGGGeAAKVTMTGNRATISSGNTFTVAKGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVI 693
Cdd:COG3468     83 GTGGNSTGGG-GGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGT 161
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  694 MGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSSNTFTVARGN 773
Cdd:COG3468    162 GSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGG 241
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  774 NASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAK 853
Cdd:COG3468    242 GGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSN 321
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  854 VIVDNADLSANSMSIGEGDTAAVTMTGNGATISSGNTFTVAKGNNASATLDYSDSKINIGNGYVGVGEKS-HTLLKLDNS 932
Cdd:COG3468    322 AGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVgTGLTTGGTG 401
                          410       420       430
                   ....*....|....*....|....*....|....*..
gi 2245374867  933 TFHAAGNIDIGKGSS-------TIANVSVGAGSNMLI 962
Cdd:COG3468    402 NNGGGGVGGGGGGGLtltggtlTVNGNYTGNNGTLVL 438
PL_Passenger_AT cd00253
Pertactin-like passenger domains (virulence factors) of autotransporter proteins of the type V ...
1260-1436 2.60e-03

Pertactin-like passenger domains (virulence factors) of autotransporter proteins of the type V secretion system. Autotransporters are proteins used by Gram-negative bacteria to transport proteins across their outer membranes. The C-terminal (beta) domain of autotransporters forms a pore in the outer membrane through which the N-terminal passenger domain is transported. Following transport, the passenger domain is generally cleaved by an outer membrane protease with the passenger domain either remaining in contact with the surface via a noncovalent interaction with the beta domain or cleaved to release a soluble protein. These proteins are highly diverse and perform a variety of functions that promote virulence, including catalyzing proteolysis, serving as an adhesin, mediating actin-promoted motility, or serving as a cytotoxin. Proteins in this family share similarity in the C-terminal region of the passenger domain as seen in the pertactin structure P.69, a Bordetella pertussis agglutinogen responsible for human pertussis. The P.69 protein consists of a 16-stranded parallel beta-helix with a V-shaped cross-section, and is one of the largest beta-helix known to date.


Pssm-ID: 238156 [Multi-domain]  Cd Length: 186  Bit Score: 40.81  E-value: 2.60e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1260 GTVSLSGTNDWKGQINVYDGTRLDARGNDAVDGILNVSKeAQVDFNGYSQ-HMTG--------IDNKGMIYLSDGSASSD 1330
Cdd:cd00253      1 GTLSGNATINGGGDLTLGGGGALTLTGNSVWLGTLQAGG-GTVSLNSNSLwTLTGdstvngnlTNSGGTVDFGSASGAFN 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1331 VYL-DKDYVAHDGS---GVQFGIFGQKeADVMHVKGDTSGSSGIVVtTNSKNKIKKGGD-ILLVEVNGDSSGSFYLNSli 1405
Cdd:cd00253     80 TLTvNGNYLGGNGTfvlNTDLGGDNSP-TDKLVVTGNASGTTNVAV-VNAGGEGASTGDgIELVEVNGGSDAAFSLAG-- 155
                          170       180       190
                   ....*....|....*....|....*....|....*
gi 2245374867 1406 kngkeykvtgdYIDVGAWEYALNKKRK----NWYL 1436
Cdd:cd00253    156 -----------RVDAGAYEYTLYKGGVgnngNWYL 179
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
25-398 2.65e-03

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 42.63  E-value: 2.65e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867   25 NIDGNTTISDRNISGSLNIGINKNANVDINGTVNIKDYFSVATCNGQSSTCPAGGLNASANINNSATVGASVTIVGDSSK 104
Cdd:COG3468     54 GNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGT 133
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  105 GELNIDGGSTLYTQqlwVSGNDNDKTSNVSDDSNGSLKINNGSNVFVVSSQDDTPFKTNPVKWNQNIISQGNNITDGTVS 184
Cdd:COG3468    134 GSAGGGGGGGGGGT---GVGGTGAAAAGGGTGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAG 210
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  185 SGDLVLGKTGNGIIDIDNNSKLDVKNDVVVSTGVDGIPNEKPSVINIKNGSNFLIHGDMKGGISAAGQLELNMDNSSNLR 264
Cdd:COG3468    211 TGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGG 290
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  265 VDKSIAVGIGSKSNISVSAASGSSISSTGDFTVATGNNSNAKLELDASNLSVNGVSTIGSGDGSITKFDIKNGSVVTSIS 344
Cdd:COG3468    291 ASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGG 370
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 2245374867  345 DMTLAKGKGTQANINISSSQLNTGSLSVGEGDNADVTMTGSGASVSSKN--TFTVA 398
Cdd:COG3468    371 GGSGGGGGAGGGGANTGSDGVGTGLTTGGTGNNGGGGVGGGGGGGLTLTggTLTVN 426
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
337-826 2.74e-03

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 42.46  E-value: 2.74e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  337 GSVVTSISDMTLAKGKGTQANINISSSQLNTGSLSVGEGDNADVTMTGSGASVSSKNTFTVAKGNNASAKLNYTDSTINI 416
Cdd:COG4625     10 GGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGG 89
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  417 GSGYIGEGESAKTQLELNNSALTASGKVFIGQGNTTQTNLTLNDKSSVNVSGEMSVAQGSSASVDVKVTNAVLSADSLSL 496
Cdd:COG4625     90 TGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGG 169
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  497 GGGEAAKVTMTGSGATVNSKNTFTVAKGNNASATLDYTDSKIDIGSGYIGEGEAAKTQLELNNSALTASGKVFIGQGNTT 576
Cdd:COG4625    170 GGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAG 249
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  577 QTNLTLNDKSSVNVSGEMSVAQGNSASVDVKVTNAVLSADSLSLGGGEAAKVTMTGNRATISSGNTFTVAKGNNASATLD 656
Cdd:COG4625    250 GGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 329
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  657 YSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQTDLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNAD 736
Cdd:COG4625    330 GGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTG 409
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  737 LSANSMSIGEGDTAAVTMTGNGATISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDV 816
Cdd:COG4625    410 GGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTT 489
                          490
                   ....*....|
gi 2245374867  817 IMGQGQETQT 826
Cdd:COG4625    490 VNGGGNYTQS 499
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
747-1224 3.85e-03

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 42.07  E-value: 3.85e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  747 GDTAAVTMTGNGATISSSNTFTVARGNNASATLDYSDSKINIGNGYIGGGEKAQTVLTLKDSALAATGDVIMGQGQETQT 826
Cdd:COG4625      1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  827 DLTLSPQSSIKVSGNMSIAQGNAASAKVIVDNADLSANSMSIGEGDTAAVTMTGNGATISSGNTFTVAKGNNASATLDYS 906
Cdd:COG4625     81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  907 DSKINIGNGYVGVGEKSHTLLKLDNSTFHAAGNIDIGKGSSTIANVSVGAGSNMLIKGNASIGVGDQAKAKFSVKDSVLN 986
Cdd:COG4625    161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867  987 IGGSLVLGQGNSTeaemSVEHSQLYSGGLLLGTANNAVVSMSANNSEISVVGDYTVAKGDGSEATLIYKNSDINLGNGIL 1066
Cdd:COG4625    241 GGGGGGGAGGGGG----GGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 316
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2245374867 1067 GAGSGVKTDLSLDNSKFVASDGIIIGKGDNAITNLSISDHSVFKGERINIGNGAYSKNSISITGNSIFDFGSSQESTIGE 1146
Cdd:COG4625    317 GGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGA 396
                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2245374867 1147 GDYSQSLVTINDASVYGDGSLTLAKGNNSFAVLNLQDNAVTNANNISLATGLGSKAIVNVSNMNSGQFNPVSMGAGDG 1224
Cdd:COG4625    397 GGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAG 474
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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