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Conserved domains on  [gi|2181798914|ref|WP_235421887|]
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ribokinase [Collinsella tanakaei]

Protein Classification

ribokinase( domain architecture ID 10100282)

ribokinase catalyzes the formation of D-ribose 5-phosphate from ribose

CATH:  3.40.1190.20
EC:  2.7.1.15
Gene Ontology:  GO:0005524|GO:0019200
PubMed:  12095261
SCOP:  4000759

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ribokinase cd01174
Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This ...
3-293 8.53e-98

Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.


:

Pssm-ID: 238579 [Multi-domain]  Cd Length: 292  Bit Score: 289.84  E-value: 8.53e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   3 KVIVFGSLNMDLTIECPRQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACG 82
Cdd:cd01174     1 KVVVVGSINVDLVTRVDRLPKPGETVLGSSFETGPGGKGANQAVAAARLGARVAMIGAVGDDAFGDELLENLREEGIDVS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  83 RIRHIDGVSTGVASITrV--GGDNCIVLDPGANHVLTGHDVTVVLDEVAAAgDVFVTQLECDLAATWEALAAAHARGLYT 160
Cdd:cd01174    81 YVEVVVGAPTGTAVIT-VdeSGENRIVVVPGANGELTPADVDAALELIAAA-DVLLLQLEIPLETVLAALRAARRAGVTV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 161 ILNPAPAVPIPREVWASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSRVLCEGRTIDSRPP 240
Cdd:cd01174   159 ILNPAPARPLPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLAKGVKNVIVTLGAKGALLASGGEVEHVPAF 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2181798914 241 AVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQQAVP 293
Cdd:cd01174   239 KVKAVDTTGAGDTFIGALAAALARGLSLEEAIRFANAAAALSVTRPGAQPSIP 291
 
Name Accession Description Interval E-value
ribokinase cd01174
Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This ...
3-293 8.53e-98

Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.


Pssm-ID: 238579 [Multi-domain]  Cd Length: 292  Bit Score: 289.84  E-value: 8.53e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   3 KVIVFGSLNMDLTIECPRQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACG 82
Cdd:cd01174     1 KVVVVGSINVDLVTRVDRLPKPGETVLGSSFETGPGGKGANQAVAAARLGARVAMIGAVGDDAFGDELLENLREEGIDVS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  83 RIRHIDGVSTGVASITrV--GGDNCIVLDPGANHVLTGHDVTVVLDEVAAAgDVFVTQLECDLAATWEALAAAHARGLYT 160
Cdd:cd01174    81 YVEVVVGAPTGTAVIT-VdeSGENRIVVVPGANGELTPADVDAALELIAAA-DVLLLQLEIPLETVLAALRAARRAGVTV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 161 ILNPAPAVPIPREVWASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSRVLCEGRTIDSRPP 240
Cdd:cd01174   159 ILNPAPARPLPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLAKGVKNVIVTLGAKGALLASGGEVEHVPAF 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2181798914 241 AVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQQAVP 293
Cdd:cd01174   239 KVKAVDTTGAGDTFIGALAAALARGLSLEEAIRFANAAAALSVTRPGAQPSIP 291
D_ribokin_bact TIGR02152
ribokinase; This model describes ribokinase, an enzyme catalyzing the first step in ribose ...
8-299 1.26e-87

ribokinase; This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not. [Energy metabolism, Sugars]


Pssm-ID: 274000 [Multi-domain]  Cd Length: 293  Bit Score: 263.69  E-value: 1.26e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   8 GSLNMDLTIECPRQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACGRIRHI 87
Cdd:TIGR02152   1 GSINMDLVLRTDRLPKPGETVHGHSFQIGPGGKGANQAVAAARLGAEVSMIGKVGDDAFGDELLENLKSNGIDTEYVGTV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  88 DGVSTGVASITrV--GGDNCIVLDPGANHVLTGHDVTVVLDEVAAAgDVFVTQLECDLAATWEALAAAHARGLYTILNPA 165
Cdd:TIGR02152  81 KDTPTGTAFIT-VddTGENRIVVVAGANAELTPEDIDAAEALIAES-DIVLLQLEIPLETVLEAAKIAKKHGVKVILNPA 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 166 PAVPI-PREVWASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSRVLCEGRTIDSRPPAVRV 244
Cdd:TIGR02152 159 PAIKDlDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLLEKGVKNVIITLGSKGALLVSKDESKLIPAFKVKA 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2181798914 245 IDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQQAVPAADEVA 299
Cdd:TIGR02152 239 VDTTAAGDTFNGAFAVALAEGKSLEDAIRFANAAAAISVTRKGAQSSIPYLEEVE 293
RbsK COG0524
Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar ...
3-298 1.27e-67

Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar or nucleoside kinase, ribokinase family is part of the Pathway/BioSystem: Glycolysis


Pssm-ID: 440290 [Multi-domain]  Cd Length: 301  Bit Score: 213.21  E-value: 1.27e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   3 KVIVFGSLNMDLTIECPRQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACG 82
Cdd:COG0524     1 DVLVIGEALVDLVARVDRLPKGGETVLAGSFRRSPGGAAANVAVALARLGARVALVGAVGDDPFGDFLLAELRAEGVDTS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  83 RIRHIDGVSTGVASITR-VGGDNCIVLDPGANHVLTGHDVTvvlDEVAAAGDVFVTQL-----ECDLAATWEALAAAHAR 156
Cdd:COG0524    81 GVRRDPGAPTGLAFILVdPDGERTIVFYRGANAELTPEDLD---EALLAGADILHLGGitlasEPPREALLAALEAARAA 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 157 GLYTILNPA-------PAVPIPREVWASVDAICLNETECEIVTGvfpgdELAIEHALELLADWGVGMVALTLGAQGSRVL 229
Cdd:COG0524   158 GVPVSLDPNyrpalwePARELLRELLALVDILFPNEEEAELLTG-----ETDPEEAAAALLARGVKLVVVTLGAEGALLY 232
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2181798914 230 CEGRTIDSRPPAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQQAVPAADEV 298
Cdd:COG0524   233 TGGEVVHVPAFPVEVVDTTGAGDAFAAGFLAGLLEGLDLEEALRFANAAAALVVTRPGAQPALPTREEV 301
PTZ00292 PTZ00292
ribokinase; Provisional
1-300 1.06e-66

ribokinase; Provisional


Pssm-ID: 185541 [Multi-domain]  Cd Length: 326  Bit Score: 211.52  E-value: 1.06e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   1 MGKVIVFGSLNMDLTIECPRQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVA 80
Cdd:PTZ00292   15 EPDVVVVGSSNTDLIGYVDRMPQVGETLHGTSFHKGFGGKGANQAVMASKLGAKVAMVGMVGTDGFGSDTIKNFKRNGVN 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  81 CGRIRHIDGVSTGVASIT--RVGGDNCIVLDPGANHVLTGHDVTVVLDEVAAAGDVFVTQLECDLAATWEALAAAHARGL 158
Cdd:PTZ00292   95 TSFVSRTENSSTGLAMIFvdTKTGNNEIVIIPGANNALTPQMVDAQTDNIQNICKYLICQNEIPLETTLDALKEAKERGC 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 159 YTILNPAPA-----VPIPREVWASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSrVLCEGR 233
Cdd:PTZ00292  175 YTVFNPAPApklaeVEIIKPFLKYVSLFCVNEVEAALITGMEVTDTESAFKASKELQQLGVENVIITLGANGC-LIVEKE 253
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2181798914 234 TIDSRPPAVRV--IDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQQAVPAADEVAA 300
Cdd:PTZ00292  254 NEPVHVPGKRVkaVDTTGAGDCFVGSMAYFMSRGKDLKESCKRANRIAAISVTRHGTQSSYPHPSELPA 322
PfkB pfam00294
pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine ...
3-289 1.88e-46

pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine kinases.


Pssm-ID: 425587 [Multi-domain]  Cd Length: 294  Bit Score: 158.28  E-value: 1.88e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   3 KVIVFGSLNMDLTIECPRQPrmGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACG 82
Cdd:pfam00294   1 KVVVIGEANIDLIGNVEGLP--GELVRVSTVEKGPGGKGANVAVALARLGGDVAFIGAVGDDNFGEFLLQELKKEGVDTD 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  83 RIRHIDGVSTGVASI-TRVGGDNCIVLDPGANHVLTGHDVTVVLDEVAAAGDVFVT---QLECDLAATWEALAAAHARGL 158
Cdd:pfam00294  79 YVVIDEDTRTGTALIeVDGDGERTIVFNRGAAADLTPEELEENEDLLENADLLYISgslPLGLPEATLEELIEAAKNGGT 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 159 YT--ILNPAPAV-PIPREVWASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSRVLCEGRTI 235
Cdd:pfam00294 159 FDpnLLDPLGAArEALLELLPLADLLKPNEEELEALTGAKLDDIEEALAALHKLLAKGIKTVIVTLGADGALVVEGDGEV 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2181798914 236 D-SRPPAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQ 289
Cdd:pfam00294 239 HvPAVPKVKVVDTTGAGDSFVGGFLAGLLAGKSLEEALRFANAAAALVVQKSGAQ 293
 
Name Accession Description Interval E-value
ribokinase cd01174
Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This ...
3-293 8.53e-98

Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.


Pssm-ID: 238579 [Multi-domain]  Cd Length: 292  Bit Score: 289.84  E-value: 8.53e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   3 KVIVFGSLNMDLTIECPRQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACG 82
Cdd:cd01174     1 KVVVVGSINVDLVTRVDRLPKPGETVLGSSFETGPGGKGANQAVAAARLGARVAMIGAVGDDAFGDELLENLREEGIDVS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  83 RIRHIDGVSTGVASITrV--GGDNCIVLDPGANHVLTGHDVTVVLDEVAAAgDVFVTQLECDLAATWEALAAAHARGLYT 160
Cdd:cd01174    81 YVEVVVGAPTGTAVIT-VdeSGENRIVVVPGANGELTPADVDAALELIAAA-DVLLLQLEIPLETVLAALRAARRAGVTV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 161 ILNPAPAVPIPREVWASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSRVLCEGRTIDSRPP 240
Cdd:cd01174   159 ILNPAPARPLPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLAKGVKNVIVTLGAKGALLASGGEVEHVPAF 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2181798914 241 AVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQQAVP 293
Cdd:cd01174   239 KVKAVDTTGAGDTFIGALAAALARGLSLEEAIRFANAAAALSVTRPGAQPSIP 291
D_ribokin_bact TIGR02152
ribokinase; This model describes ribokinase, an enzyme catalyzing the first step in ribose ...
8-299 1.26e-87

ribokinase; This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not. [Energy metabolism, Sugars]


Pssm-ID: 274000 [Multi-domain]  Cd Length: 293  Bit Score: 263.69  E-value: 1.26e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   8 GSLNMDLTIECPRQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACGRIRHI 87
Cdd:TIGR02152   1 GSINMDLVLRTDRLPKPGETVHGHSFQIGPGGKGANQAVAAARLGAEVSMIGKVGDDAFGDELLENLKSNGIDTEYVGTV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  88 DGVSTGVASITrV--GGDNCIVLDPGANHVLTGHDVTVVLDEVAAAgDVFVTQLECDLAATWEALAAAHARGLYTILNPA 165
Cdd:TIGR02152  81 KDTPTGTAFIT-VddTGENRIVVVAGANAELTPEDIDAAEALIAES-DIVLLQLEIPLETVLEAAKIAKKHGVKVILNPA 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 166 PAVPI-PREVWASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSRVLCEGRTIDSRPPAVRV 244
Cdd:TIGR02152 159 PAIKDlDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLLEKGVKNVIITLGSKGALLVSKDESKLIPAFKVKA 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2181798914 245 IDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQQAVPAADEVA 299
Cdd:TIGR02152 239 VDTTAAGDTFNGAFAVALAEGKSLEDAIRFANAAAAISVTRKGAQSSIPYLEEVE 293
RbsK COG0524
Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar ...
3-298 1.27e-67

Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar or nucleoside kinase, ribokinase family is part of the Pathway/BioSystem: Glycolysis


Pssm-ID: 440290 [Multi-domain]  Cd Length: 301  Bit Score: 213.21  E-value: 1.27e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   3 KVIVFGSLNMDLTIECPRQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACG 82
Cdd:COG0524     1 DVLVIGEALVDLVARVDRLPKGGETVLAGSFRRSPGGAAANVAVALARLGARVALVGAVGDDPFGDFLLAELRAEGVDTS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  83 RIRHIDGVSTGVASITR-VGGDNCIVLDPGANHVLTGHDVTvvlDEVAAAGDVFVTQL-----ECDLAATWEALAAAHAR 156
Cdd:COG0524    81 GVRRDPGAPTGLAFILVdPDGERTIVFYRGANAELTPEDLD---EALLAGADILHLGGitlasEPPREALLAALEAARAA 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 157 GLYTILNPA-------PAVPIPREVWASVDAICLNETECEIVTGvfpgdELAIEHALELLADWGVGMVALTLGAQGSRVL 229
Cdd:COG0524   158 GVPVSLDPNyrpalwePARELLRELLALVDILFPNEEEAELLTG-----ETDPEEAAAALLARGVKLVVVTLGAEGALLY 232
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2181798914 230 CEGRTIDSRPPAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQQAVPAADEV 298
Cdd:COG0524   233 TGGEVVHVPAFPVEVVDTTGAGDAFAAGFLAGLLEGLDLEEALRFANAAAALVVTRPGAQPALPTREEV 301
PTZ00292 PTZ00292
ribokinase; Provisional
1-300 1.06e-66

ribokinase; Provisional


Pssm-ID: 185541 [Multi-domain]  Cd Length: 326  Bit Score: 211.52  E-value: 1.06e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   1 MGKVIVFGSLNMDLTIECPRQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVA 80
Cdd:PTZ00292   15 EPDVVVVGSSNTDLIGYVDRMPQVGETLHGTSFHKGFGGKGANQAVMASKLGAKVAMVGMVGTDGFGSDTIKNFKRNGVN 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  81 CGRIRHIDGVSTGVASIT--RVGGDNCIVLDPGANHVLTGHDVTVVLDEVAAAGDVFVTQLECDLAATWEALAAAHARGL 158
Cdd:PTZ00292   95 TSFVSRTENSSTGLAMIFvdTKTGNNEIVIIPGANNALTPQMVDAQTDNIQNICKYLICQNEIPLETTLDALKEAKERGC 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 159 YTILNPAPA-----VPIPREVWASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSrVLCEGR 233
Cdd:PTZ00292  175 YTVFNPAPApklaeVEIIKPFLKYVSLFCVNEVEAALITGMEVTDTESAFKASKELQQLGVENVIITLGANGC-LIVEKE 253
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2181798914 234 TIDSRPPAVRV--IDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQQAVPAADEVAA 300
Cdd:PTZ00292  254 NEPVHVPGKRVkaVDTTGAGDCFVGSMAYFMSRGKDLKESCKRANRIAAISVTRHGTQSSYPHPSELPA 322
PRK11142 PRK11142
ribokinase; Provisional
1-300 2.41e-66

ribokinase; Provisional


Pssm-ID: 236858 [Multi-domain]  Cd Length: 306  Bit Score: 209.73  E-value: 2.41e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   1 MGKVIVFGSLNMDLTIECPRQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVA 80
Cdd:PRK11142    2 MGKLVVLGSINADHVLNLESFPRPGETLTGRHYQVAFGGKGANQAVAAARLGADIAFIACVGDDSIGESMRQQLAKDGID 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  81 CGRIRHIDGVSTGVASItRVG--GDNCIVLDPGANHVLTGHDVTVVLDEVAAAgDVFVTQLECDLAATWEALAAAHARGL 158
Cdd:PRK11142   82 TAPVSVIKGESTGVALI-FVNdeGENSIGIHAGANAALTPALVEAHRELIANA-DALLMQLETPLETVLAAAKIAKQHGT 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 159 YTILNPAPAVPIPREVWASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSRVLCEGRTidSR 238
Cdd:PRK11142  160 KVILNPAPARELPDELLALVDIITPNETEAEKLTGIRVEDDDDAAKAAQVLHQKGIETVLITLGSRGVWLSENGEG--QR 237
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2181798914 239 PPAVRV--IDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQQAVPAADEVAA 300
Cdd:PRK11142  238 VPGFRVqaVDTIAAGDTFNGALVTALLEGKPLPEAIRFAHAAAAIAVTRKGAQPSIPWREEIDA 301
PfkB pfam00294
pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine ...
3-289 1.88e-46

pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine kinases.


Pssm-ID: 425587 [Multi-domain]  Cd Length: 294  Bit Score: 158.28  E-value: 1.88e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   3 KVIVFGSLNMDLTIECPRQPrmGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACG 82
Cdd:pfam00294   1 KVVVIGEANIDLIGNVEGLP--GELVRVSTVEKGPGGKGANVAVALARLGGDVAFIGAVGDDNFGEFLLQELKKEGVDTD 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  83 RIRHIDGVSTGVASI-TRVGGDNCIVLDPGANHVLTGHDVTVVLDEVAAAGDVFVT---QLECDLAATWEALAAAHARGL 158
Cdd:pfam00294  79 YVVIDEDTRTGTALIeVDGDGERTIVFNRGAAADLTPEELEENEDLLENADLLYISgslPLGLPEATLEELIEAAKNGGT 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 159 YT--ILNPAPAV-PIPREVWASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSRVLCEGRTI 235
Cdd:pfam00294 159 FDpnLLDPLGAArEALLELLPLADLLKPNEEELEALTGAKLDDIEEALAALHKLLAKGIKTVIVTLGADGALVVEGDGEV 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2181798914 236 D-SRPPAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQ 289
Cdd:pfam00294 239 HvPAVPKVKVVDTTGAGDSFVGGFLAGLLAGKSLEEALRFANAAAALVVQKSGAQ 293
ribokinase_group_A cd01942
Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ...
4-289 4.98e-32

Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238917 [Multi-domain]  Cd Length: 279  Bit Score: 120.11  E-value: 4.98e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   4 VIVFGSLNMDLTIECPRQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACGR 83
Cdd:cd01942     2 VAVVGHLNYDIILKVESFPGPFESVLVKDLRREFGGSAGNTAVALAKLGLSPGLVAAVGEDFHGRLYLEELREEGVDTSH 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  84 IRHIDGVSTGVASITRVGGDNCIV-LDPGAN---HVLTGHDVTVVLDEVAAAGDVFVTQLECDLaatwealaaaHARGLY 159
Cdd:cd01942    82 VRVVDEDSTGVAFILTDGDDNQIAyFYPGAMdelEPNDEADPDGLADIVHLSSGPGLIELAREL----------AAGGIT 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 160 TILNPAPAVP-----IPREVWASVDAICLNETECEIVtgvfpgDELAIEHALELLAdwGVGMVALTLGAQGSRVLCEGRT 234
Cdd:cd01942   152 VSFDPGQELPrlsgeELEEILERADILFVNDYEAELL------KERTGLSEAELAS--GVRVVVVTLGPKGAIVFEDGEE 223
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2181798914 235 IDSRP-PAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQ 289
Cdd:cd01942   224 VEVPAvPAVKVVDTTGAGDAFRAGFLYGLLRGYDLEESLRLGNLAASLKVERRGAQ 279
KdgK cd01166
2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form ...
3-288 7.67e-29

2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.


Pssm-ID: 238571 [Multi-domain]  Cd Length: 294  Bit Score: 111.90  E-value: 7.67e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   3 KVIVFGSLNMDLTiecPRQPRMGETVtgSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACG 82
Cdd:cd01166     1 DVVTIGEVMVDLS---PPGGGRLEQA--DSFRKFFGGAEANVAVGLARLGHRVALVTAVGDDPFGRFILAELRREGVDTS 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  83 RIRHIDGVSTGVASITRVGGDNCIVL---DPGANHVLTGHDVTvvLDEVAAAGDVFVT-----QLECDLAATWEALAAAH 154
Cdd:cd01166    76 HVRVDPGRPTGLYFLEIGAGGERRVLyyrAGSAASRLTPEDLD--EAALAGADHLHLSgitlaLSESAREALLEALEAAK 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 155 ARGLYTIL---------NPAPAVPIPREVWASVDAICLNETECEIVTGVFPGDElAIEHALELLAdwGVGMVALTLGAQG 225
Cdd:cd01166   154 ARGVTVSFdlnyrpklwSAEEAREALEELLPYVDIVLPSEEEAEALLGDEDPTD-AAERALALAL--GVKAVVVKLGAEG 230
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2181798914 226 SRVLCEGRTIDSRPPAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGA 288
Cdd:cd01166   231 ALVYTGGGRVFVPAYPVEVVDTTGAGDAFAAGFLAGLLEGWDLEEALRFANAAAALVVTRPGD 293
FruK COG1105
1-phosphofructokinase or 6-phosphofructokinase II [Carbohydrate transport and metabolism];
10-302 2.59e-23

1-phosphofructokinase or 6-phosphofructokinase II [Carbohydrate transport and metabolism];


Pssm-ID: 440722 [Multi-domain]  Cd Length: 304  Bit Score: 97.13  E-value: 2.59e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  10 LN--MDLTIECPRqPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVfGDALVASLEGAGVACGRIRhI 87
Cdd:COG1105     6 LNpaLDRTYEVDE-LEPGEVNRASEVRLDPGGKGINVARVLKALGVDVTALGFLGGFT-GEFIEELLDEEGIPTDFVP-I 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  88 DGVS-TGVASITRVGGDNCIVLDPGAnhVLTGHDVTVVLD---EVAAAGDVFV----------TQLECDLAATWealaaa 153
Cdd:COG1105    83 EGETrINIKIVDPSDGTETEINEPGP--EISEEELEALLErleELLKEGDWVVlsgslppgvpPDFYAELIRLA------ 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 154 HARGLYTIL---NPA--PAVPiprevwASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSRV 228
Cdd:COG1105   155 RARGAKVVLdtsGEAlkAALE------AGPDLIKPNLEELEELLGRPLETLEDIIAAARELLERGAENVVVSLGADGALL 228
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2181798914 229 LCEGRTIDSRPPAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQqaVPAADEVAALM 302
Cdd:COG1105   229 VTEDGVYRAKPPKVEVVSTVGAGDSMVAGFLAGLARGLDLEEALRLAVAAGAAAALSPGTG--LPDREDVEELL 300
bac_FRK cd01167
Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for ...
3-288 1.25e-21

Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.


Pssm-ID: 238572 [Multi-domain]  Cd Length: 295  Bit Score: 92.31  E-value: 1.25e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   3 KVIVFGSLNMDLTIEcprqprmgETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACG 82
Cdd:cd01167     1 KVVCFGEALIDFIPE--------GSGAPETFTKAPGGAPANVAVALARLGGKAAFIGKVGDDEFGDFLLETLKEAGVDTR 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  83 RIRHIDGVSTGVASITRVG-GDNC--IVLDPGANHVLTGHDVTVVLDEVAAAgdVF--VTQLECDLAATWEAL-AAAHAR 156
Cdd:cd01167    73 GIQFDPAAPTTLAFVTLDAdGERSfeFYRGPAADLLLDTELNPDLLSEADIL--HFgsIALASEPSRSALLELlEAAKKA 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 157 GLYTIL----------NPAPAVPIPREVWASVDAICLNETECEIVTGVFPGDElaiehALELLADWGVGMVALTLGAQGS 226
Cdd:cd01167   151 GVLISFdpnlrpplwrDEEEARERIAELLELADIVKLSDEELELLFGEEDPEE-----IAALLLLFGLKLVLVTRGADGA 225
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2181798914 227 RVLCEGRTIDSRPPAVRVIDTTGAGDTYIGA----LAMGRARGLS---LDETVEWATCSSALATARLGA 288
Cdd:cd01167   226 LLYTKGGVGEVPGIPVEVVDTTGAGDAFVAGllaqLLSRGLLALDedeLAEALRFANAVGALTCTKAGA 294
ribokinase_group_B cd01945
Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ...
4-293 1.31e-21

Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .


Pssm-ID: 238920 [Multi-domain]  Cd Length: 284  Bit Score: 91.97  E-value: 1.31e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   4 VIVFGSLNMDLTIECPRQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACGR 83
Cdd:cd01945     2 VLGVGLAVLDLIYLVASFPGGDGKIVATDYAVIGGGNAANAAVAVARLGGQARLIGVVGDDAIGRLILAELAAEGVDTSF 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  84 IRHIDGVSTGVASITRVGGDNCIVLdpgANHVLTG-HDVTVVLDEVAAAGDVFVTQLECDlaATWEALAAAHARGLYTIL 162
Cdd:cd01945    82 IVVAPGARSPISSITDITGDRATIS---ITAIDTQaAPDSLPDAILGGADAVLVDGRQPE--AALHLAQEARARGIPIPL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 163 --NPAPAVPIPREVWASVDAIClNETECEIVTGVfpgdelAIEHALELLADWGVGMVALTLGAQGSRVL-CEGRTIDSRP 239
Cdd:cd01945   157 dlDGGGLRVLEELLPLADHAIC-SENFLRPNTGS------ADDEALELLASLGIPFVAVTLGEAGCLWLeRDGELFHVPA 229
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2181798914 240 PAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQQAVP 293
Cdd:cd01945   230 FPVEVVDTTGAGDVFHGAFAHALAEGMPLREALRFASAAAALKCRGLGGRAGLP 283
RfaE COG2870
ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell wall/membrane ...
37-300 1.34e-19

ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442117 [Multi-domain]  Cd Length: 321  Bit Score: 87.17  E-value: 1.34e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  37 PGGkGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACGRIRHIDGVSTGVAsiTRVGGDNCIVL--DPGANH 114
Cdd:COG2870    55 PGG-AANVAANLAALGAQVTLVGVVGDDEAGRELRRLLEEAGIDTDGLVVDPRRPTTTK--TRVIAGGQQLLrlDFEDRF 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 115 VLTGHDVTVVLDEVAAAGDvfvtqlECD-----------LAATWEALAAAHARGLYtilNPAPAVPIPREVWASVDAICL 183
Cdd:COG2870   132 PLSAELEARLLAALEAALP------EVDavilsdygkgvLTPELIQALIALARAAG---KPVLVDPKGRDFSRYRGATLL 202
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 184 --NETECEIVTGVFPGDELAIE-HALELLADWGVGMVALTLGAQGSRVLCEGRTIDSRP-PAVRVIDTTGAGDTYIGALA 259
Cdd:COG2870   203 tpNLKEAEAAVGIPIADEEELVaAAAELLERLGLEALLVTRGEEGMTLFDADGPPHHLPaQAREVFDVTGAGDTVIATLA 282
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2181798914 260 MGRARGLSLDETVEWATCSSALATARLGAqqAVPAADEVAA 300
Cdd:COG2870   283 LALAAGASLEEAAELANLAAGIVVGKLGT--ATVSPEELLA 321
FruK_PfkB_like cd01164
1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. ...
12-287 5.86e-17

1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.


Pssm-ID: 238570 [Multi-domain]  Cd Length: 289  Bit Score: 79.11  E-value: 5.86e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  12 MDLTIECPrQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDvFGDALVASLEGAGVACGRIRhidgvs 91
Cdd:cd01164    11 IDLTIELD-QLQPGEVNRVSSTRKDAGGKGINVARVLKDLGVEVTALGFLGGF-TGDFFEALLKEEGIPDDFVE------ 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  92 tgVASITRVggdNCIVLDPGANH---VLTGHDVTV--------VLDEVAAAGDVFV--------------TQLecdlaat 146
Cdd:cd01164    83 --VAGETRI---NVKIKEEDGTEteiNEPGPEISEeelealleKLKALLKKGDIVVlsgslppgvpadfyAEL------- 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 147 weaLAAAHARGLYTILNPAPAvPIPREVWASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGS 226
Cdd:cd01164   151 ---VRLAREKGARVILDTSGE-ALLAALAAKPFLIKPNREELEELFGRPLGDEEDVIAAARKLIERGAENVLVSLGADGA 226
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2181798914 227 RVLCEGRTIDSRPPAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLG 287
Cdd:cd01164   227 LLVTKDGVYRASPPKVKVVSTVGAGDSMVAGFVAGLAQGLSLEEALRLAVAAGSATAFSPG 287
adenosine_kinase cd01168
Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside ...
35-288 2.30e-16

Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor.The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway.


Pssm-ID: 238573 [Multi-domain]  Cd Length: 312  Bit Score: 78.04  E-value: 2.30e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  35 LNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACgRIRHIDGVSTGVasitrvggdnCIVL-DPGAN 113
Cdd:cd01168    52 YIAGGSAANTIRGAAALGGSAAFIGRVGDDKLGDFLLKDLRAAGVDT-RYQVQPDGPTGT----------CAVLvTPDAE 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 114 -----HVLTGHDVTVVLDEVAAAGDVFVTQLE-----CDLAATWEALAAAHARGLYTILN-PAPA-VPIPREVWAS---- 177
Cdd:cd01168   121 rtmctYLGAANELSPDDLDWSLLAKAKYLYLEgylltVPPEAILLAAEHAKENGVKIALNlSAPFiVQRFKEALLEllpy 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 178 VDAICLNETECEIVTGVFPGDELAIehALELLADwGVGMVALTLGAQGSRVLCEGRTID-SRPPAVRVIDTTGAGDTYIG 256
Cdd:cd01168   201 VDILFGNEEEAEALAEAETTDDLEA--ALKLLAL-RCRIVVITQGAKGAVVVEGGEVYPvPAIPVEKIVDTNGAGDAFAG 277
                         250       260       270
                  ....*....|....*....|....*....|..
gi 2181798914 257 ALAMGRARGLSLDETVEWATCSSALATARLGA 288
Cdd:cd01168   278 GFLYGLVQGEPLEECIRLGSYAAAEVIQQLGP 309
Fructoselysine_kinase_like cd01940
Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a ...
37-265 8.52e-16

Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.


Pssm-ID: 238915 [Multi-domain]  Cd Length: 264  Bit Score: 75.47  E-value: 8.52e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  37 PGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACGRIRHIDGvSTGVAsitrvggdncIVLDPGANHVL 116
Cdd:cd01940    21 PGGNALNVAVYAKRLGHESAYIGAVGNDDAGAHVRSTLKRLGVDISHCRVKEG-ENAVA----------DVELVDGDRIF 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 117 TGHDVTVVLDEVAAAGDV-FVTQLecDLAATWEALAAAHARGLYTILNpAPAVPIPREVWASVDAICLnETECEIVT-GV 194
Cdd:cd01940    90 GLSNKGGVAREHPFEADLeYLSQF--DLVHTGIYSHEGHLEKALQALV-GAGALISFDFSDRWDDDYL-QLVCPYVDfAF 165
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2181798914 195 FPGDELAIEHALELLAD---WGVGMVALTLGAQGSRVLCEGRTIDSRPPAVRVIDTTGAGDTYIGALAMGRARG 265
Cdd:cd01940   166 FSASDLSDEEVKAKLKEavsRGAKLVIVTRGEDGAIAYDGAVFYSVAPRPVEVVDTLGAGDSFIAGFLLSLLAG 239
ribokinase_pfkB_like cd00287
ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including ...
3-263 7.39e-15

ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase).


Pssm-ID: 238177 [Multi-domain]  Cd Length: 196  Bit Score: 71.74  E-value: 7.39e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   3 KVIVFGSLNMDLTIECPRQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAvgvdvfgdalvaslegagvacg 82
Cdd:cd00287     1 RVLVVGSLLVDVILRVDALPLPGGLVRPGDTEERAGGGAANVAVALARLGVSVTLVGA---------------------- 58
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  83 RIRHIDGVSTGVASITRVggdncivldpgANHVLTgHDVTVVLDEVAAAGDVFVTQLEcdlaatwealaaaharglytil 162
Cdd:cd00287    59 DAVVISGLSPAPEAVLDA-----------LEEARR-RGVPVVLDPGPRAVRLDGEELE---------------------- 104
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 163 npapavpiprEVWASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSRVLCEGRTIDSRPP-A 241
Cdd:cd00287   105 ----------KLLPGVDILTPNEEEAEALTGRRDLEVKEAAEAAALLLSKGPKVVIVTLGEKGAIVATRGGTEVHVPAfP 174
                         250       260
                  ....*....|....*....|..
gi 2181798914 242 VRVIDTTGAGDTYIGALAMGRA 263
Cdd:cd00287   175 VKVVDTTGAGDAFLAALAAGLA 196
YegV_kinase_like cd01944
YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase ...
3-287 4.30e-14

YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238919 [Multi-domain]  Cd Length: 289  Bit Score: 71.30  E-value: 4.30e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   3 KVIVFGSLNMDLTIECPRQPRMGETVTGSGFLLNPGGkGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGvacg 82
Cdd:cd01944     1 KVLVIGAAVVDIVLDVDKLPASGGDIEAKSKSYVIGG-GFNVMVAASRLGIPTVNAGPLGNGNWADQIRQAMRDEG---- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  83 rIRHIDGVSTGVASITRV-----GGDNCIVLDPGANHVLTGHDVTVVldEVAAAGDVFVT--QL--ECDLAATWEALAAA 153
Cdd:cd01944    76 -IEILLPPRGGDDGGCLValvepDGERSFISISGAEQDWSTEWFATL--TVAPYDYVYLSgyTLasENASKVILLEWLEA 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 154 HARGLYTILNPAPAVP-IPREVWASVDA----ICLNETECEIVTGvfPGDELAIEHALELLADWGVGMVaLTLGAQGSRV 228
Cdd:cd01944   153 LPAGTTLVFDPGPRISdIPDTILQALMAkrpiWSCNREEAAIFAE--RGDPAAEASALRIYAKTAAPVV-VRLGSNGAWI 229
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 229 -LCEGRTIDSRPPAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLG 287
Cdd:cd01944   230 rLPDGNTHIIPGFKVKAVDTIGAGDTHAGGMLAGLAKGMSLADAVLLANAAAAIVVTRSG 289
RfaE_like cd01172
RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the ...
37-294 3.71e-13

RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.


Pssm-ID: 238577 [Multi-domain]  Cd Length: 304  Bit Score: 68.36  E-value: 3.71e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  37 PGGkGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACGRIRhIDGVSTGVAsiTRVGGDN--CIVLDPGANH 114
Cdd:cd01172    39 LGG-AANVANNLASLGAKVTLLGVVGDDEAGDLLRKLLEKEGIDTDGIV-DEGRPTTTK--TRVIARNqqLLRVDREDDS 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 115 VLTGHDVTVV---LDEVAAAGDVFVTqleCDlaatwealaaaHARGLYT------ILNPAPAVPIP---------REVWA 176
Cdd:cd01172   115 PLSAEEEQRLierIAERLPEADVVIL---SD-----------YGKGVLTprvieaLIAAARELGIPvlvdpkgrdYSKYR 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 177 SVDAICLNETECEIVTGVFPGDELAIEHALE-LLADWGVGMVALTLGAQGSRVLCEGRTIDSRPP-AVRVIDTTGAGDTY 254
Cdd:cd01172   181 GATLLTPNEKEAREALGDEINDDDELEAAGEkLLELLNLEALLVTLGEEGMTLFERDGEVQHIPAlAKEVYDVTGAGDTV 260
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 2181798914 255 IGALAMGRARGLSLDETVEWATCSSALATARLGAQQAVPA 294
Cdd:cd01172   261 IATLALALAAGADLEEAAFLANAAAGVVVGKVGTAPVTPK 300
YeiC_kinase_like cd01941
YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ...
3-282 9.37e-13

YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238916 [Multi-domain]  Cd Length: 288  Bit Score: 67.34  E-value: 9.37e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   3 KVIVFGSLNMDLTIECPRQPRMGETVTGSGFLlNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACg 82
Cdd:cd01941     1 EIVVIGAANIDLRGKVSGSLVPGTSNPGHVKQ-SPGGVGRNIAENLARLGVSVALLSAVGDDSEGESILEESEKAGLNV- 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  83 RIRHIDGVSTG--VASITRVGGDNCIVLDPGANHVLTGHDVTVVLDEVAAAGDVFVtqlECDLAATWEALAAAHAR--GL 158
Cdd:cd01941    79 RGIVFEGRSTAsyTAILDKDGDLVVALADMDIYELLTPDFLRKIREALKEAKPIVV---DANLPEEALEYLLALAAkhGV 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 159 YTILNP--APAVPIPREVWASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSrVLCEGRTID 236
Cdd:cd01941   156 PVAFEPtsAPKLKKLFYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKILLLPGIKNVIVTLGAKGV-LLSSREGGV 234
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2181798914 237 SR---PPAV--RVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALA 282
Cdd:cd01941   235 ETklfPAPQpeTVVNVTGAGDAFVAGLVAGLLEGMSLDDSLRFAQAAAALT 285
PRK09813 PRK09813
fructoselysine 6-kinase; Provisional
37-280 4.93e-12

fructoselysine 6-kinase; Provisional


Pssm-ID: 182090 [Multi-domain]  Cd Length: 260  Bit Score: 64.76  E-value: 4.93e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  37 PGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACGRIRHIDGVsTGVASITRVGGDNCI------VLdp 110
Cdd:PRK09813   22 SGGNAVNVAVYCTRYGIQPGCITWVGDDDYGTKLKQDLARMGVDISHVHTKHGV-TAQTQVELHDNDRVFgdytegVM-- 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 111 gANHVLTGHDVtvvldEVAAAGDVFVTQL----ECDLaatwealAAAHARGLYTILNPA--PAVPIPREVWASVDaicln 184
Cdd:PRK09813   99 -ADFALSEEDY-----AWLAQYDIVHAAIwghaEDAF-------PQLHAAGKLTAFDFSdkWDSPLWQTLVPHLD----- 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 185 eteceIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSRVLCEGRTIDSRPPAVRVIDTTGAGDTYIGALAMGRAR 264
Cdd:PRK09813  161 -----YAFASAPQEDEFLRLKMKAIVARGAGVVIVTLGENGSIAWDGAQFWRQAPEPVTVVDTMGAGDSFIAGFLCGWLA 235
                         250
                  ....*....|....*.
gi 2181798914 265 GLSLDETVEWATCSSA 280
Cdd:PRK09813  236 GMTLPQAMAQGTACAA 251
PLN02341 PLN02341
pfkB-type carbohydrate kinase family protein
39-302 2.49e-11

pfkB-type carbohydrate kinase family protein


Pssm-ID: 215195 [Multi-domain]  Cd Length: 470  Bit Score: 64.08  E-value: 2.49e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  39 GKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGV-ACGRIRHIDGVSTGVASITRVggdNCIVL-DPGANHVL 116
Cdd:PLN02341  120 GGNCNFAIAAARLGLRCSTIGHVGDEIYGKFLLDVLAEEGIsVVGLIEGTDAGDSSSASYETL---LCWVLvDPLQRHGF 196
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 117 TGH----------DVTVVLDEVAAA----------GDVFvTQLECDLAATWEALAAAhaRGLYTILNPAP-------AVP 169
Cdd:PLN02341  197 CSRadfgpepafsWISKLSAEAKMAirqskalfcnGYVF-DELSPSAIASAVDYAID--VGTAVFFDPGPrgksllvGTP 273
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 170 IPREVWASV----DAICLNETECEIVTGVfpgdELAIEHALELL-----ADWgvgmVALTLGAQGSrVLCEGRTIDSRP- 239
Cdd:PLN02341  274 DERRALEHLlrmsDVLLLTSEEAEALTGI----RNPILAGQELLrpgirTKW----VVVKMGSKGS-ILVTRSSVSCAPa 344
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2181798914 240 PAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSAlATAR-LGAQQAVPAADEVAALM 302
Cdd:PLN02341  345 FKVNVVDTVGCGDSFAAAIALGYIHNLPLVNTLTLANAVGA-ATAMgCGAGRNVATLEKVLELL 407
PRK09434 PRK09434
aminoimidazole riboside kinase; Provisional
1-299 2.54e-11

aminoimidazole riboside kinase; Provisional


Pssm-ID: 236514 [Multi-domain]  Cd Length: 304  Bit Score: 63.03  E-value: 2.54e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   1 MGKVIVFGSLNMDLTIEcprqprmgetvtGSGFLLN-PGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGV 79
Cdd:PRK09434    2 MNKVWVLGDAVVDLIPE------------GENRYLKcPGGAPANVAVGIARLGGESGFIGRVGDDPFGRFMQQTLQDEGV 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  80 ACGRIRHIDGVSTgvaSITRVGGDNC------IVLDPGANHVLTGHDVTV-------------------------VLDEV 128
Cdd:PRK09434   70 DTTYLRLDPAHRT---STVVVDLDDQgersftFMVRPSADLFLQPQDLPPfrqgewlhlcsialsaepsrsttfeAMRRI 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 129 AAAGDvFVT---QLECDLAAtwealaaaharglytilNPAPAVPIPREVWASVDAICLNETECEIVTGvfpgdELAIEHA 205
Cdd:PRK09434  147 KAAGG-FVSfdpNLREDLWQ-----------------DEAELRECLRQALALADVVKLSEEELCFLSG-----TSQLEDA 203
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 206 LELLAD-WGVGMVALTLGAQGSRVLCEGRTIDSRPPAVRVIDTTGAGDTYIGALAMGRARG------LSLDETVEWATCS 278
Cdd:PRK09434  204 IYALADrYPIALLLVTLGAEGVLVHTRGQVQHFPAPSVDPVDTTGAGDAFVAGLLAGLSQAglwtdeAELAEIIAQAQAC 283
                         330       340
                  ....*....|....*....|.
gi 2181798914 279 SALATARLGAQQAVPAADEVA 299
Cdd:PRK09434  284 GALATTAKGAMTALPNRQELE 304
PLN02323 PLN02323
probable fructokinase
27-302 2.99e-11

probable fructokinase


Pssm-ID: 215183 [Multi-domain]  Cd Length: 330  Bit Score: 63.10  E-value: 2.99e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  27 TVTG------SGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACGRIRHIDGVSTGVASIT-R 99
Cdd:PLN02323   26 TVSGvslaeaPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGDDEFGHMLADILKKNGVNNEGVRFDPGARTALAFVTlR 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 100 VGGDNCIVL--DPGANHVLTGHDVTVVLDEVAAagdVF-------------VTQLEcdlaatwealAAAHARGLYTILNP 164
Cdd:PLN02323  106 SDGEREFMFyrNPSADMLLRESELDLDLIRKAK---IFhygsislitepcrSAHLA----------AMKIAKEAGALLSY 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 165 APAVPIP--------RE----VWASVDAICLNETECEIVTGvfpGDELAIEHALELLADwGVGMVALTLGAQGSRVLCeg 232
Cdd:PLN02323  173 DPNLRLPlwpsaeaaREgimsIWDEADIIKVSDEEVEFLTG---GDDPDDDTVVKLWHP-NLKLLLVTEGEEGCRYYT-- 246
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2181798914 233 RTIDSRPPAVRV--IDTTGAGDTYIGALAMGRARGLS-------LDETVEWATCSSALATARLGAQQAVPAADEVAALM 302
Cdd:PLN02323  247 KDFKGRVEGFKVkaVDTTGAGDAFVGGLLSQLAKDLSlledeerLREALRFANACGAITTTERGAIPALPTKEAVLKLL 325
fruK PRK09513
1-phosphofructokinase; Provisional
205-282 6.03e-09

1-phosphofructokinase; Provisional


Pssm-ID: 181923 [Multi-domain]  Cd Length: 312  Bit Score: 56.24  E-value: 6.03e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2181798914 205 ALELLADWGVGMVALTLGAQGSRVLCEGRTIDSRPPAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALA 282
Cdd:PRK09513  208 AAHALREQGIAHVVISLGAEGALWVNASGEWIAKPPACDVVSTVGAGDSMVGGLIYGLLMRESSEHTLRLATAVSALA 285
Guanosine_kinase_like cd01947
Guanosine kinase-like sugar kinases. Found in bacteria and archaea, the guanosine kinase-like ...
3-283 1.01e-08

Guanosine kinase-like sugar kinases. Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238922 [Multi-domain]  Cd Length: 265  Bit Score: 55.12  E-value: 1.01e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   3 KVIVFGSLNMDLTIECPRQPRMGETVTGSGFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEgAGVACG 82
Cdd:cd01947     1 KIAVVGHVEWDIFLSLDAPPQPGGISHSSDSRESPGGGGANVAVQLAKLGNDVRFFSNLGRDEIGIQSLEELE-SGGDKH 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  83 RIrHIDGVSTGVASITRVGGDNCIVLDPGANH-------VLTGHDvTVVLDevAAAGDVFVTQLEcdlaatwealaaahA 155
Cdd:cd01947    80 TV-AWRDKPTRKTLSFIDPNGERTITVPGERLeddlkwpILDEGD-GVFIT--AAAVDKEAIRKC--------------R 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 156 RGLYTILNPAPAVpiprevwaSVDAICLNETECEIVTGvfPGDELAIEHALELLADWGVGMVALTLGAQGSRVLCEGRTI 235
Cdd:cd01947   142 ETKLVILQVTPRV--------RVDELNQALIPLDILIG--SRLDPGELVVAEKIAGPFPRYLIVTEGELGAILYPGGRYN 211
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 2181798914 236 DSRPPAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWAT-CSSALAT 283
Cdd:cd01947   212 HVPAKKAKVPDSTGAGDSFAAGFIYGLLKGWSIEEALELGAqCGAICVS 260
PRK09850 PRK09850
pseudouridine kinase; Provisional
4-284 1.68e-08

pseudouridine kinase; Provisional


Pssm-ID: 182111 [Multi-domain]  Cd Length: 313  Bit Score: 54.99  E-value: 1.68e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   4 VIVFGSLNMDLTIECPRQPRMGETVTGSgFLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACGR 83
Cdd:PRK09850    7 VVIIGSANIDVAGYSHESLNYADSNPGK-IKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNQSGVYVDK 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  84 IRHIDGVSTG------------VASITRVGGDNCIVLDPGANHV--LTGHDVTVVldevaaagdvfvtqlECDLAATWEA 149
Cdd:PRK09850   86 CLIVPGENTSsylslldntgemLVAINDMNISNAITAEYLAQHRefIQRAKVIVA---------------DCNISEEALA 150
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 150 LAAAHARGLYTILNPAPA---VPIpREVWASVDAICLNETECEIVTGVfpgdELAIEHALELLADW----GVGMVALTLG 222
Cdd:PRK09850  151 WILDNAANVPVFVDPVSAwkcVKV-RDRLNQIHTLKPNRLEAETLSGI----ALSGREDVAKVAAWfhqhGLNRLVLSMG 225
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2181798914 223 AQG---SRVlcEGRTIDSRPPAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATA 284
Cdd:PRK09850  226 GDGvyySDI--SGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSSMALS 288
ribokinase_group_D cd01937
Ribokinase-like subgroup D. Found in bacteria and archaea, this subgroup is part of the ...
205-284 7.04e-08

Ribokinase-like subgroup D. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238912 [Multi-domain]  Cd Length: 254  Bit Score: 52.40  E-value: 7.04e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 205 ALELLADWGVGMVALTLGAQGSRVLCEGRTIDSRPPAVRVIDTTGAGDTYIGALAMGRARGLSLdetvEWATCSSALATA 284
Cdd:cd01937   175 LARLIKETGVKEIIVTDGEEGGYIFDGNGKYTIPASKKDVVDPTGAGDVFLAAFLYSRLSGKDI----KEAAEFAAAAAA 250
PRK11316 PRK11316
bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose ...
37-288 3.59e-07

bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;


Pssm-ID: 183085 [Multi-domain]  Cd Length: 473  Bit Score: 51.37  E-value: 3.59e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  37 PGGkGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACgrirHIDGVSTgVASIT--RVGGDN--CIVLD--- 109
Cdd:PRK11316   50 PGG-AANVAMNIASLGAQARLVGLTGIDEAARALSKLLAAVGVKC----DFVSVPT-HPTITklRVLSRNqqLIRLDfee 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 110 -----------PGANHVLTGHDVTVV-------LDEVA-------AAG-DVFV----TQLEcdlaatwealaaaHARGLy 159
Cdd:PRK11316  124 gfegvdpqpllERIEQALPSIGALVLsdyakgaLASVQamiqlarKAGvPVLIdpkgTDFE-------------RYRGA- 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 160 TILNPapavpiprevwasvdaiclNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLGAQGSRVLCEGRtidsrP 239
Cdd:PRK11316  190 TLLTP-------------------NLSEFEAVVGKCKDEAELVEKGMKLIADYDLSALLVTRSEQGMTLLQPGK-----A 245
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2181798914 240 P------AVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGA 288
Cdd:PRK11316  246 PlhlptqAREVYDVTGAGDTVISVLAAALAAGNSLEEACALANAAAGVVVGKLGT 300
MAK32 cd01943
MAK32 kinase. MAK32 is a protein found primarily in fungi that is necessary for the ...
215-287 1.07e-06

MAK32 kinase. MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply.


Pssm-ID: 238918 [Multi-domain]  Cd Length: 328  Bit Score: 49.26  E-value: 1.07e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2181798914 215 GMVALTLGAQGSRVL-CEGRTIDSRPP----AVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLG 287
Cdd:cd01943   226 GGVVLRCGKLGCYVGsADSGPELWLPAyhtkSTKVVDPTGGGNSFLGGFAAGLALTKSIDEACIYGSVAASFAIEQVG 303
PRK09954 PRK09954
sugar kinase;
5-302 2.46e-06

sugar kinase;


Pssm-ID: 182165 [Multi-domain]  Cd Length: 362  Bit Score: 48.39  E-value: 2.46e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914   5 IVFGSLNMDL----TIECPRQPRMGETVTGSGfllnpGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGV- 79
Cdd:PRK09954   61 VVVGAINMDIrgmaDIRYPQAASHPGTIHCSA-----GGVGRNIAHNLALLGRDVHLLSAIGDDFYGETLLEETRRAGVn 135
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  80 --ACGRIrHIDGVSTGVASITRvggDNCIVLDPGANHV---LTGHDVTVVLDEVAAAGDVFVtqlECDLAatwealaaah 154
Cdd:PRK09954  136 vsGCIRL-HGQSTSTYLAIANR---QDETVLAINDTHIlqqLTPQLLNGSRDLIRHAGVVLA---DCNLT---------- 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 155 ARGLYTILNPAPAVPI------------PREVWASVDAICLNETECEIVTGVFPGDELAIEHALELLADWGVGMVALTLG 222
Cdd:PRK09954  199 AEALEWVFTLADEIPVfvdtvsefkagkIKHWLAHIHTLKPTQPELEILWGQAITSDADRNAAVNALHQQGVQQIFVYLP 278
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 223 AQGsrVLC---EGRTIDSRPPAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLGAQQAVPAADEVA 299
Cdd:PRK09954  279 DES--VFCsekDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAMACAAISRASGSLNNPTLSADNAL 356

                  ...
gi 2181798914 300 ALM 302
Cdd:PRK09954  357 SLV 359
PLN02813 PLN02813
pfkB-type carbohydrate kinase family protein
26-299 2.81e-06

pfkB-type carbohydrate kinase family protein


Pssm-ID: 215434 [Multi-domain]  Cd Length: 426  Bit Score: 48.27  E-value: 2.81e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  26 ETVTGSGFLLNPGGKGANQAVAAARLGADTV--------MIGAVGVDVFGDALVASLEGAGVACGRIRHIDGVSTGVasi 97
Cdd:PLN02813  114 RALDGCSYKASAGGSLSNTLVALARLGSQSAagpalnvaMAGSVGSDPLGDFYRTKLRRANVHFLSQPVKDGTTGTV--- 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914  98 trvggdncIVL-DPGANHVL---TGHDVTVVLDEVAA----AGDVFVTQ-----LECDLAATWEALAAAHARGLYTILNP 164
Cdd:PLN02813  191 --------IVLtTPDAQRTMlsyQGTSSTVNYDSCLAsaisKSRVLVVEgylweLPQTIEAIAQACEEAHRAGALVAVTA 262
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 165 APAVPIPR---EVW----ASVDAICLNETECEIVTGVfpGDELAIEHALELLADWgVGMVALTLGAQGSRVLCEGRTIDS 237
Cdd:PLN02813  263 SDVSCIERhrdDFWdvmgNYADILFANSDEARALCGL--GSEESPESATRYLSHF-CPLVSVTDGARGSYIGVKGEAVYI 339
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2181798914 238 RPPAVRVIDTTGAGDTYIGALAMGRARGLSLDETV-EWATCSSALATARLGAQQAVPAADEVA 299
Cdd:PLN02813  340 PPSPCVPVDTCGAGDAYAAGILYGLLRGVSDLRGMgELAARVAATVVGQQGTRLRVEDAVELA 402
PLN02379 PLN02379
pfkB-type carbohydrate kinase family protein
203-289 1.52e-04

pfkB-type carbohydrate kinase family protein


Pssm-ID: 178005 [Multi-domain]  Cd Length: 367  Bit Score: 42.86  E-value: 1.52e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2181798914 203 EHALELLA---DWGVgmvaLTLGAQGSRVLCEGRTIdsRPPAV---RVIDTTGAGDTYIGALAMGRARGLSLDETVEWAT 276
Cdd:PLN02379  256 EAALEFLAkycNWAV----VTLGSKGCIARHGKEVV--RVPAIgetNAVDATGAGDLFASGFLYGLIKGLSLEECCKVGA 329
                          90
                  ....*....|...
gi 2181798914 277 CSSALATARLGAQ 289
Cdd:PLN02379  330 CSGGSVVRALGGE 342
PRK10294 PRK10294
6-phosphofructokinase 2; Provisional
217-287 1.97e-04

6-phosphofructokinase 2; Provisional


Pssm-ID: 182361 [Multi-domain]  Cd Length: 309  Bit Score: 42.46  E-value: 1.97e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2181798914 217 VALTLGAQGSRVLCEGRTIDSRPPAVRVIDTTGAGDTYIGALAMGRARGLSLDETVEWATCSSALATARLG 287
Cdd:PRK10294  221 VVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQG 291
PLN02543 PLN02543
pfkB-type carbohydrate kinase family protein
33-95 2.31e-04

pfkB-type carbohydrate kinase family protein


Pssm-ID: 215299  Cd Length: 496  Bit Score: 42.59  E-value: 2.31e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2181798914  33 FLLNPGGKGANQAVAAARLGADTVMIGAVGVDVFGDALVASLEGAGVACGRIRHIDGVSTGVA 95
Cdd:PLN02543  167 FARAPGGPPSNVAISHVRLGGRAAFMGKVGDDDFGEELVLMMNKERVQTRAVKFDENAKTACS 229
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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