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Conserved domains on  [gi|1819231918|ref|WP_164943263|]
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PerC family transcriptional regulator [Klebsiella pneumoniae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PerC super family cl05552
PerC transcriptional activator; PerC is a transcriptional activator of EaeA/BfpA expression in ...
 3-81 1.58e-21

PerC transcriptional activator; PerC is a transcriptional activator of EaeA/BfpA expression in enteropathogenic bacteria.


The actual alignment was detected with superfamily member pfam06069:

Pssm-ID: 310570  Cd Length: 90  Bit Score: 80.31  E-value: 1.58e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1819231918  3 APSLEACGLYRRAASRWIEVMQRCLDDEDREWIRHHRNQCLKKAQRPPAPKEEFADLHQAAKETQYRMGIAKPYGEAFR 81
Cdd:pfam06069  7 AEKLEAKGFYRRAADRWAEVMVLVETDAERKWAAQRRAECLRKASRPPLPPDNISEIKKAVDRTYREMGIATVSGEVFR 85
 
Name Accession Description Interval E-value
PerC pfam06069
PerC transcriptional activator; PerC is a transcriptional activator of EaeA/BfpA expression in ...
 3-81 1.58e-21

PerC transcriptional activator; PerC is a transcriptional activator of EaeA/BfpA expression in enteropathogenic bacteria.


Pssm-ID: 310570  Cd Length: 90  Bit Score: 80.31  E-value: 1.58e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1819231918  3 APSLEACGLYRRAASRWIEVMQRCLDDEDREWIRHHRNQCLKKAQRPPAPKEEFADLHQAAKETQYRMGIAKPYGEAFR 81
Cdd:pfam06069  7 AEKLEAKGFYRRAADRWAEVMVLVETDAERKWAAQRRAECLRKASRPPLPPDNISEIKKAVDRTYREMGIATVSGEVFR 85
 
Name Accession Description Interval E-value
PerC pfam06069
PerC transcriptional activator; PerC is a transcriptional activator of EaeA/BfpA expression in ...
 3-81 1.58e-21

PerC transcriptional activator; PerC is a transcriptional activator of EaeA/BfpA expression in enteropathogenic bacteria.


Pssm-ID: 310570  Cd Length: 90  Bit Score: 80.31  E-value: 1.58e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1819231918  3 APSLEACGLYRRAASRWIEVMQRCLDDEDREWIRHHRNQCLKKAQRPPAPKEEFADLHQAAKETQYRMGIAKPYGEAFR 81
Cdd:pfam06069  7 AEKLEAKGFYRRAADRWAEVMVLVETDAERKWAAQRRAECLRKASRPPLPPDNISEIKKAVDRTYREMGIATVSGEVFR 85
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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