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Conserved domains on  [gi|1752088159|ref|WP_150286791|]
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N-acetyl-gamma-glutamyl-phosphate reductase [Rhabdaerophilum calidifontis]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
argC_other super family cl36993
N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form; This model represents the less ...
14-318 1.58e-128

N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form; This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. [Amino acid biosynthesis, Glutamate family]


The actual alignment was detected with superfamily member TIGR01851:

Pssm-ID: 273833 [Multi-domain]  Cd Length: 310  Bit Score: 369.17  E-value: 1.58e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159  14 PTIFIDGEAGTTGLQIRDLLAAEPGIVLRSIAPEKRKDIAAKRDLMAEVDIVILCLPDESARETVELADSlgpARPRFID 93
Cdd:TIGR01851   2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRRKDAAERAKLLNAADVAILCLPDDAAREAVSLVDN---PNTCIID 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159  94 ASTAHRVAPGWVYGFPELARGQAEAIAAAANVANPGCYPTGGIALIRPLVDAGLMRPDFPVTVNAVSGYSGGGRPMIEAY 173
Cdd:TIGR01851  79 ASTAYRTADDWAYGFPELAPGQREKIRNSKRIANPGCYPTGFIALMRPLVEAGILPADFPITINAVSGYSGGGKAMIADY 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 174 EAGTAP-----AFELYGLMLSHKHLPELTTYSRLTRTPIFVPSVGNFRQGMLVSVPLHIDMLSHVSSAGMLRDCLAAHYA 248
Cdd:TIGR01851 159 EQGSADnpslqPFRIYGLALTHKHLPEMRVHSGLALPPIFTPAVGNFAQGMAVTIPLHLQTLASKVSPADIHAALADYYQ 238
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1752088159 249 GSRFVHVASAAETAALKGKI-EPQALNNTNRLELFVFWNDTRGQVVLVARLDNLGKGASGAAVQNLRLMLG 318
Cdd:TIGR01851 239 GEQFVRVAPLDDVETLDNTFlDPQGLNGTNRLDLFVFGSDDGERALLVARLDNLGKGASGAAVQNLNIMLG 309
 
Name Accession Description Interval E-value
argC_other TIGR01851
N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form; This model represents the less ...
14-318 1.58e-128

N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form; This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. [Amino acid biosynthesis, Glutamate family]


Pssm-ID: 273833 [Multi-domain]  Cd Length: 310  Bit Score: 369.17  E-value: 1.58e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159  14 PTIFIDGEAGTTGLQIRDLLAAEPGIVLRSIAPEKRKDIAAKRDLMAEVDIVILCLPDESARETVELADSlgpARPRFID 93
Cdd:TIGR01851   2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRRKDAAERAKLLNAADVAILCLPDDAAREAVSLVDN---PNTCIID 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159  94 ASTAHRVAPGWVYGFPELARGQAEAIAAAANVANPGCYPTGGIALIRPLVDAGLMRPDFPVTVNAVSGYSGGGRPMIEAY 173
Cdd:TIGR01851  79 ASTAYRTADDWAYGFPELAPGQREKIRNSKRIANPGCYPTGFIALMRPLVEAGILPADFPITINAVSGYSGGGKAMIADY 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 174 EAGTAP-----AFELYGLMLSHKHLPELTTYSRLTRTPIFVPSVGNFRQGMLVSVPLHIDMLSHVSSAGMLRDCLAAHYA 248
Cdd:TIGR01851 159 EQGSADnpslqPFRIYGLALTHKHLPEMRVHSGLALPPIFTPAVGNFAQGMAVTIPLHLQTLASKVSPADIHAALADYYQ 238
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1752088159 249 GSRFVHVASAAETAALKGKI-EPQALNNTNRLELFVFWNDTRGQVVLVARLDNLGKGASGAAVQNLRLMLG 318
Cdd:TIGR01851 239 GEQFVRVAPLDDVETLDNTFlDPQGLNGTNRLDLFVFGSDDGERALLVARLDNLGKGASGAAVQNLNIMLG 309
PLN02968 PLN02968
Probable N-acetyl-gamma-glutamyl-phosphate reductase
2-318 7.95e-95

Probable N-acetyl-gamma-glutamyl-phosphate reductase


Pssm-ID: 215522 [Multi-domain]  Cd Length: 381  Bit Score: 285.95  E-value: 7.95e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159   2 SPESAFRLKGSSPTIFIDGEAGTTGLQIRDLLAAEPGIVLRSIAPEKRKD------------------IAAKRDLMAEVD 63
Cdd:PLN02968   27 SSASSSVKSEEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGqsfgsvfphlitqdlpnlVAVKDADFSDVD 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159  64 IVILCLPDESARETVeladSLGPARPRFIDASTAHRVAPG-----W--------------VYGFPELARGQAEAIAAAAn 124
Cdd:PLN02968  107 AVFCCLPHGTTQEII----KALPKDLKIVDLSADFRLRDIaeyeeWyghphrapelqkeaVYGLTELQREEIKSARLVA- 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 125 vaNPGCYPTGGIALIRPLVDAGLMRPDfPVTVNAVSGYSGGGRPMIEAYEAG-TAPAFELYGLMlSHKHLPE----LTTY 199
Cdd:PLN02968  182 --NPGCYPTGIQLPLVPLVKAGLIEPD-NIIIDAKSGVSGAGRGAKEANLYTeIAEGIGAYGVT-RHRHVPEieqgLADA 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 200 SRLTRTPIFVPSVGNFRQGMLVSVPLHidmLSHVSSAGMLRDCLAAHYAGSRFVHVASaaetaalKGKI-EPQALNNTNR 278
Cdd:PLN02968  258 AGSKVTPSFTPHLMPMSRGMQSTVYVH---YAPGVTAEDLHQHLKERYEGEEFVKVLE-------RGAVpHTDHVRGSNY 327
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1752088159 279 LELFVFWNDTRGQVVLVARLDNLGKGASGAAVQNLRLMLG 318
Cdd:PLN02968  328 CELNVFADRIPGRAIIISVIDNLVKGASGQAVQNLNLMMG 367
AGPR_2_C cd23935
C-terminal catalytic domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR), type 2 and ...
129-305 6.50e-94

C-terminal catalytic domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR), type 2 and similar proteins; N-acetyl-gamma-glutamyl-phosphate reductase (AGPR; EC 1.2.1.38), also called N-acetyl-glutamate semialdehyde dehydrogenase, or NAGSA dehydrogenase, catalyzes the NADPH-dependent reduction of N-acetyl-gamma-glutamyl-phosphate phosphate, the third step of arginine biosynthesis. N-acetyl-gamma-glutamyl-phosphate phosphate, the product of the second step catalyzed by acetylglutamate kinase, undergoes reductive dephosphorylation to give N-acetylglutamic semialdehyde, which is converted to ornithine by acetylornithine aminotransferase and acetylornithine deacetylase. AGPR proteins contain an N-terminal Rossmann fold NAD(P)H-binding domain and a C-terminal glyceraldehyde-3-phosphate dehydrogenase (GAPDH)-like catalytic domain and are members of the GAPDH superfamily of proteins. NADP(+) binds in a cleft between these domains and contacts both. There are two related families of N-acetyl-gamma-glutamyl-phosphate reductase, which differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. The model corresponds to type 2 AGPR family.


Pssm-ID: 467684  Cd Length: 178  Bit Score: 276.02  E-value: 6.50e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 129 GCYPTGGIALIRPLVDAGLMRPDFPVTVNAVSGYSGGGRPMIEAY---EAGTAPAFELYGLMLSHKHLPELTTYSRLTRT 205
Cdd:cd23935     1 GCYATGAILLLRPLVEAGLLPADYPLSIHAVSGYSGGGKKMIEQYeaaEAADLPPPRPYGLGLEHKHLPEMQKHAGLARP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 206 PIFVPSVGNFRQGMLVSVPLHIDMLSHVSSAGMLRDCLAAHYAGSRFVHVASAAETAALkGKIEPQALNNTNRLELFVFW 285
Cdd:cd23935    81 PIFTPAVGNFYQGMLVTVPLHLDLLEKGVSAAEVHEALAEHYAGERFVKVMPLDEPDAL-GFLDPQALNGTNNLELFVFG 159
                         170       180
                  ....*....|....*....|
gi 1752088159 286 NDtRGQVVLVARLDNLGKGA 305
Cdd:cd23935   160 ND-KGQALLVARLDNLGKGA 178
ArgC COG0002
N-acetyl-gamma-glutamylphosphate reductase [Amino acid transport and metabolism]; ...
57-318 2.89e-41

N-acetyl-gamma-glutamylphosphate reductase [Amino acid transport and metabolism]; N-acetyl-gamma-glutamylphosphate reductase is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 439773 [Multi-domain]  Cd Length: 345  Bit Score: 146.37  E-value: 2.89e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159  57 DLMAEVDIVILCLPDESAREtveLADSLGPARPRFIDASTAHRV---------------APG----WVYGFPELARGQAE 117
Cdd:COG0002    63 ELAAGCDVVFLALPHGVSME---LAPELLEAGVKVIDLSADFRLkdpavyekwygfehaAPEllgeAVYGLPELNREEIK 139
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 118 AIAAAAnvaNPGCYPTGGI-ALIrPLVDAGLMRPDfPVTVNAVSGYSGGGR-PMI-----EAYEAGTApafelYGLmLSH 190
Cdd:COG0002   140 GARLIA---NPGCYPTAVLlALA-PLLKAGLIDPD-DIIIDAKSGVSGAGRkASEgthfsEVNENFRA-----YKV-GGH 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 191 KHLPELTTY-SRLTRTPI---FVPSVGNFRQGMLVSVplHIDMLSHVSsAGMLRDCLAAHYAGSRFVHVASAAETAALKg 266
Cdd:COG0002   209 RHTPEIEQElSRLAGEDVkvsFTPHLVPMVRGILATI--YARLKDGVT-EEDLRAAYEEFYADEPFVRVLPEGRLPETK- 284
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1752088159 267 kiepqALNNTNRLELFVFWNDTRGQVVLVARLDNLGKGASGAAVQNLRLMLG 318
Cdd:COG0002   285 -----SVRGSNFCDIGVAVDERTGRLVVVSAIDNLVKGAAGQAVQNMNLMFG 331
Semialdhyde_dh smart00859
Semialdehyde dehydrogenase, NAD binding domain; The semialdehyde dehydrogenase family is found ...
15-115 1.92e-16

Semialdehyde dehydrogenase, NAD binding domain; The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.


Pssm-ID: 214863 [Multi-domain]  Cd Length: 123  Bit Score: 74.12  E-value: 1.92e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159   15 TIFIDGEAGTTGLQIRDLLAAEPGI---VLRSIAPEKRKDIAAKRDLMA---------------EVDIVILCLPDESARE 76
Cdd:smart00859   1 KVAIVGATGYVGQELLRLLAEHPDFeltALAASSRSAGKKVSEAGPHLKgevvleldppdfeelAVDIVFLALPHGVSKE 80
                           90       100       110
                   ....*....|....*....|....*....|....*....
gi 1752088159   77 TVELADSLGPARPRFIDASTAHRVAPGWVYGFPELARGQ 115
Cdd:smart00859  81 SAPLLPRAAAAGAVVIDLSSAFRMDDDVPYGLPEVNPEA 119
Semialdhyde_dh pfam01118
Semialdehyde dehydrogenase, NAD binding domain; This Pfam entry contains the following members: ...
53-113 4.61e-06

Semialdehyde dehydrogenase, NAD binding domain; This Pfam entry contains the following members: N-acetyl-glutamine semialdehyde dehydrogenase (AgrC) Aspartate-semialdehyde dehydrogenase


Pssm-ID: 426059 [Multi-domain]  Cd Length: 121  Bit Score: 45.21  E-value: 4.61e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1752088159  53 AAKRDLMAEVDIVILCLPDESAREtveLADSLGPARPRFIDASTAHRVAPGWVYGFPELAR 113
Cdd:pfam01118  58 DVDPEDFKDVDIVFFALPGGVSKE---IAPKLAEAGAKVIDLSSDFRMDDDVPYGLPEVNR 115
 
Name Accession Description Interval E-value
argC_other TIGR01851
N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form; This model represents the less ...
14-318 1.58e-128

N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form; This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. [Amino acid biosynthesis, Glutamate family]


Pssm-ID: 273833 [Multi-domain]  Cd Length: 310  Bit Score: 369.17  E-value: 1.58e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159  14 PTIFIDGEAGTTGLQIRDLLAAEPGIVLRSIAPEKRKDIAAKRDLMAEVDIVILCLPDESARETVELADSlgpARPRFID 93
Cdd:TIGR01851   2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRRKDAAERAKLLNAADVAILCLPDDAAREAVSLVDN---PNTCIID 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159  94 ASTAHRVAPGWVYGFPELARGQAEAIAAAANVANPGCYPTGGIALIRPLVDAGLMRPDFPVTVNAVSGYSGGGRPMIEAY 173
Cdd:TIGR01851  79 ASTAYRTADDWAYGFPELAPGQREKIRNSKRIANPGCYPTGFIALMRPLVEAGILPADFPITINAVSGYSGGGKAMIADY 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 174 EAGTAP-----AFELYGLMLSHKHLPELTTYSRLTRTPIFVPSVGNFRQGMLVSVPLHIDMLSHVSSAGMLRDCLAAHYA 248
Cdd:TIGR01851 159 EQGSADnpslqPFRIYGLALTHKHLPEMRVHSGLALPPIFTPAVGNFAQGMAVTIPLHLQTLASKVSPADIHAALADYYQ 238
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1752088159 249 GSRFVHVASAAETAALKGKI-EPQALNNTNRLELFVFWNDTRGQVVLVARLDNLGKGASGAAVQNLRLMLG 318
Cdd:TIGR01851 239 GEQFVRVAPLDDVETLDNTFlDPQGLNGTNRLDLFVFGSDDGERALLVARLDNLGKGASGAAVQNLNIMLG 309
PLN02968 PLN02968
Probable N-acetyl-gamma-glutamyl-phosphate reductase
2-318 7.95e-95

Probable N-acetyl-gamma-glutamyl-phosphate reductase


Pssm-ID: 215522 [Multi-domain]  Cd Length: 381  Bit Score: 285.95  E-value: 7.95e-95
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159   2 SPESAFRLKGSSPTIFIDGEAGTTGLQIRDLLAAEPGIVLRSIAPEKRKD------------------IAAKRDLMAEVD 63
Cdd:PLN02968   27 SSASSSVKSEEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGqsfgsvfphlitqdlpnlVAVKDADFSDVD 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159  64 IVILCLPDESARETVeladSLGPARPRFIDASTAHRVAPG-----W--------------VYGFPELARGQAEAIAAAAn 124
Cdd:PLN02968  107 AVFCCLPHGTTQEII----KALPKDLKIVDLSADFRLRDIaeyeeWyghphrapelqkeaVYGLTELQREEIKSARLVA- 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 125 vaNPGCYPTGGIALIRPLVDAGLMRPDfPVTVNAVSGYSGGGRPMIEAYEAG-TAPAFELYGLMlSHKHLPE----LTTY 199
Cdd:PLN02968  182 --NPGCYPTGIQLPLVPLVKAGLIEPD-NIIIDAKSGVSGAGRGAKEANLYTeIAEGIGAYGVT-RHRHVPEieqgLADA 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 200 SRLTRTPIFVPSVGNFRQGMLVSVPLHidmLSHVSSAGMLRDCLAAHYAGSRFVHVASaaetaalKGKI-EPQALNNTNR 278
Cdd:PLN02968  258 AGSKVTPSFTPHLMPMSRGMQSTVYVH---YAPGVTAEDLHQHLKERYEGEEFVKVLE-------RGAVpHTDHVRGSNY 327
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1752088159 279 LELFVFWNDTRGQVVLVARLDNLGKGASGAAVQNLRLMLG 318
Cdd:PLN02968  328 CELNVFADRIPGRAIIISVIDNLVKGASGQAVQNLNLMMG 367
AGPR_2_C cd23935
C-terminal catalytic domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR), type 2 and ...
129-305 6.50e-94

C-terminal catalytic domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR), type 2 and similar proteins; N-acetyl-gamma-glutamyl-phosphate reductase (AGPR; EC 1.2.1.38), also called N-acetyl-glutamate semialdehyde dehydrogenase, or NAGSA dehydrogenase, catalyzes the NADPH-dependent reduction of N-acetyl-gamma-glutamyl-phosphate phosphate, the third step of arginine biosynthesis. N-acetyl-gamma-glutamyl-phosphate phosphate, the product of the second step catalyzed by acetylglutamate kinase, undergoes reductive dephosphorylation to give N-acetylglutamic semialdehyde, which is converted to ornithine by acetylornithine aminotransferase and acetylornithine deacetylase. AGPR proteins contain an N-terminal Rossmann fold NAD(P)H-binding domain and a C-terminal glyceraldehyde-3-phosphate dehydrogenase (GAPDH)-like catalytic domain and are members of the GAPDH superfamily of proteins. NADP(+) binds in a cleft between these domains and contacts both. There are two related families of N-acetyl-gamma-glutamyl-phosphate reductase, which differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. The model corresponds to type 2 AGPR family.


Pssm-ID: 467684  Cd Length: 178  Bit Score: 276.02  E-value: 6.50e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 129 GCYPTGGIALIRPLVDAGLMRPDFPVTVNAVSGYSGGGRPMIEAY---EAGTAPAFELYGLMLSHKHLPELTTYSRLTRT 205
Cdd:cd23935     1 GCYATGAILLLRPLVEAGLLPADYPLSIHAVSGYSGGGKKMIEQYeaaEAADLPPPRPYGLGLEHKHLPEMQKHAGLARP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 206 PIFVPSVGNFRQGMLVSVPLHIDMLSHVSSAGMLRDCLAAHYAGSRFVHVASAAETAALkGKIEPQALNNTNRLELFVFW 285
Cdd:cd23935    81 PIFTPAVGNFYQGMLVTVPLHLDLLEKGVSAAEVHEALAEHYAGERFVKVMPLDEPDAL-GFLDPQALNGTNNLELFVFG 159
                         170       180
                  ....*....|....*....|
gi 1752088159 286 NDtRGQVVLVARLDNLGKGA 305
Cdd:cd23935   160 ND-KGQALLVARLDNLGKGA 178
AGPR_2_N cd17896
N-terminal NAD(P)-binding domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR), type 2 ...
14-129 1.01e-47

N-terminal NAD(P)-binding domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR), type 2 and similar proteins; AGPR (EC 1.2.1.38), also called N-acetyl-glutamate semialdehyde dehydrogenase, or NAGSA dehydrogenase, catalyzes the NADPH-dependent reduction of N-acetyl-gamma-glutamyl-phosphate phosphate; the third step of arginine biosynthesis. N-acetyl-gamma-glutamyl-phosphate phosphate, the product of the second step catalyzed by acetylglutamate kinase, undergoes reductive dephosphorylation to give N-acetylglutamic semialdehyde, which is converted to ornithine by acetylornithine aminotransferase and acetylornithine deacetylase. AGPR proteins contain an N-terminal Rossmann fold NAD(P)-binding domain and a C-terminal glyceraldehyde-3-phosphate dehydrogenase (GAPDH)-like catalytic domain and are members of the GAPDH superfamily of proteins. NADP(+) binds in a cleft between these domains and contacts both. There are two related families of N-acetyl-gamma-glutamyl-phosphate reductase, which differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. The model corresponds to type 2 AGPR family.


Pssm-ID: 467522 [Multi-domain]  Cd Length: 132  Bit Score: 156.61  E-value: 1.01e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159  14 PTIFIDGEAGTTGLQIRDLLAAEPGIVLRSIAPEKRKDIAAKRDLMAEVDIVILCLPDESARETVELADSlgpARPRFID 93
Cdd:cd17896     1 PKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEDKRKDPAARAELLNAADIAILCLPDDAAREAVALVTN---PRTRIID 77
                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1752088159  94 ASTAHRVAPGWVYGFPELARGQAEAIAAAANVANPG 129
Cdd:cd17896    78 ASTAHRTAPGWAYGFPELSPEQREKIATSKRVANPG 113
ArgC COG0002
N-acetyl-gamma-glutamylphosphate reductase [Amino acid transport and metabolism]; ...
57-318 2.89e-41

N-acetyl-gamma-glutamylphosphate reductase [Amino acid transport and metabolism]; N-acetyl-gamma-glutamylphosphate reductase is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 439773 [Multi-domain]  Cd Length: 345  Bit Score: 146.37  E-value: 2.89e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159  57 DLMAEVDIVILCLPDESAREtveLADSLGPARPRFIDASTAHRV---------------APG----WVYGFPELARGQAE 117
Cdd:COG0002    63 ELAAGCDVVFLALPHGVSME---LAPELLEAGVKVIDLSADFRLkdpavyekwygfehaAPEllgeAVYGLPELNREEIK 139
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 118 AIAAAAnvaNPGCYPTGGI-ALIrPLVDAGLMRPDfPVTVNAVSGYSGGGR-PMI-----EAYEAGTApafelYGLmLSH 190
Cdd:COG0002   140 GARLIA---NPGCYPTAVLlALA-PLLKAGLIDPD-DIIIDAKSGVSGAGRkASEgthfsEVNENFRA-----YKV-GGH 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 191 KHLPELTTY-SRLTRTPI---FVPSVGNFRQGMLVSVplHIDMLSHVSsAGMLRDCLAAHYAGSRFVHVASAAETAALKg 266
Cdd:COG0002   209 RHTPEIEQElSRLAGEDVkvsFTPHLVPMVRGILATI--YARLKDGVT-EEDLRAAYEEFYADEPFVRVLPEGRLPETK- 284
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1752088159 267 kiepqALNNTNRLELFVFWNDTRGQVVLVARLDNLGKGASGAAVQNLRLMLG 318
Cdd:COG0002   285 -----SVRGSNFCDIGVAVDERTGRLVVVSAIDNLVKGAAGQAVQNMNLMFG 331
AGPR_C cd18125
C-terminal catalytic domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) and similar ...
130-305 6.07e-35

C-terminal catalytic domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) and similar proteins; N-acetyl-gamma-glutamyl-phosphate reductase (AGPR; EC 1.2.1.38), also called N-acetyl-glutamate semialdehyde dehydrogenase, or NAGSA dehydrogenase, catalyzes the third step in the biosynthesis of arginine from glutamate, the NADP-dependent reduction of N-acetyl-5-glutamyl phosphate into N-acetylglutamate 5-semialdehyde. In bacteria it is a monofunctional protein of 35 to 38kDa (gene argC), while in fungi it is part of a bifunctional mitochondrial enzyme (gene ARG5,6, arg11 or arg-6) which contains a N-terminal acetylglutamate kinase (EC 2.7.2.8) domain and a C-terminal AGPR domain. There are two related families (type 1 and type 2) of N-acetyl-gamma-glutamyl-phosphate reductase, which differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. This family also includes LysY (LysW-L-2-aminoadipate/LysW-L-glutamate phosphate reductase, EC 1.2.1.103/EC 1.2.1.106), which is involved in both the arginine and lysine biosynthetic pathways.


Pssm-ID: 467675  Cd Length: 166  Bit Score: 124.92  E-value: 6.07e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 130 CYPTGGIALIRPLVDAGLMrPDFPVTVNAVSGYSGGGRPMIEAY-EAGTAPAFELYGLMLsHKHLPELTTYSRLTRTPIF 208
Cdd:cd18125     1 CYATAALLALYPLLKAGLL-KPTPITVTGVSGTSGAGRAASPASlHPEVAGSLRPYALSG-HRHTPEIAQNLGGKHNVHF 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 209 VPSVGNFRQGMLVSVPLHIDMLShvsSAGMLRDCLAAHYAGSRFVHVasaaetaaLKGKI--EPQALNNTNRLELFVFWN 286
Cdd:cd18125    79 TPHVGPWVRGILMTIQCFTQKGW---SLRQLHEAYREAYAGEPFVRV--------MPQGKgpDPKFVQGTNYADIGVELE 147
                         170
                  ....*....|....*....
gi 1752088159 287 DTRGQVVLVARLDNLGKGA 305
Cdd:cd18125   148 EDTGRLVVMSAIDNLVKGA 166
argC TIGR01850
N-acetyl-gamma-glutamyl-phosphate reductase, common form; This model represents the more ...
51-318 1.38e-34

N-acetyl-gamma-glutamyl-phosphate reductase, common form; This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. [Amino acid biosynthesis, Glutamate family]


Pssm-ID: 273832 [Multi-domain]  Cd Length: 346  Bit Score: 128.85  E-value: 1.38e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159  51 DIAAKRDLMAEVDIVILCLPDESAREtveLADSLGPARPRFIDASTAHRVAP-------------------GWVYGFPEL 111
Cdd:TIGR01850  58 EPIDVEEILEDADVVFLALPHGVSAE---LAPELLAAGVKVIDLSADFRLKDpelyekwygfehagpellqKAVYGLPEL 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 112 ARGQAEAIAAAAnvaNPGCYPTGGIALIRPLVDAGLMRPDFPVtVNAVSGYSGGGR-PMIEAYEAGTAPAFELYGLMlSH 190
Cdd:TIGR01850 135 HREEIKGARLIA---NPGCYPTATLLALAPLLKEGLIDPTSII-VDAKSGVSGAGRkASEANHFPEVNENLRPYKVT-GH 209
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 191 KHLPE----LTTYSRLTRTPIFVPSVGNFRQGMLVSVplHIDMLSHVSSAGmLRDCLAAHYAGSRFVHVASAAETAALKg 266
Cdd:TIGR01850 210 RHTPEieqeLGRLAGGKVKVSFTPHLVPMTRGILATI--YAKLKDGLTEED-LRALYEEFYADEPFVRVLPEGGYPSTK- 285
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1752088159 267 kiepqALNNTNRLELFVFWNDTRGQVVLVARLDNLGKGASGAAVQNLRLMLG 318
Cdd:TIGR01850 286 -----AVIGSNFCDIGFAVDERTGRVVVVSAIDNLVKGAAGQAVQNMNLMFG 332
AGPR_1_C cd23934
C-terminal catalytic domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR), type 1 and ...
129-305 7.18e-25

C-terminal catalytic domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR), type 1 and similar proteins; N-acetyl-gamma-glutamyl-phosphate reductase (AGPR; EC 1.2.1.38), also called N-acetyl-glutamate semialdehyde dehydrogenase, or NAGSA dehydrogenase, catalyzes the NADPH-dependent reduction of N-acetyl-gamma-glutamyl-phosphate phosphate, the third step of arginine biosynthesis. N-acetyl-gamma-glutamyl-phosphate phosphate, the product of the second step catalyzed by acetylglutamate kinase, undergoes reductive dephosphorylation to give N-acetylglutamic semialdehyde, which is converted to ornithine by acetylornithine aminotransferase and acetylornithine deacetylase. AGPR proteins contain an N-terminal Rossmann fold NAD(P)H-binding domain and a C-terminal glyceraldehyde-3-phosphate dehydrogenase (GAPDH)-like catalytic domain and are members of the GAPDH superfamily of proteins. NADP(+) binds in a cleft between these domains and contacts both. There are two related families of N-acetyl-gamma-glutamyl-phosphate reductase, which differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. The model corresponds to type 1 AGPR family. Bacterial members of this family tend to be found within Arg biosynthesis operons. The type 1 AGPR family also includes LysY (LysW-L-2-aminoadipate/LysW-L-glutamate phosphate reductase), which is involved in both, the arginine and lysine, biosynthetic pathways.


Pssm-ID: 467683  Cd Length: 171  Bit Score: 98.32  E-value: 7.18e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 129 GCYPTGGI-ALIrPLVDAGLMRPDfPVTVNAVSGYSGGGR-PMIEAYEAGTAPAFELYGLmLSHKHLPELTTY-SRLTRT 205
Cdd:cd23934     1 GCYPTAALlALA-PLLKAGLIEPD-DIIIDAKSGVSGAGRkASETTHFSEVNENLKAYKV-GGHRHTPEIEQElSKLAGE 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 206 PI---FVPSVGNFRQGMLVSVplHIDMLSHVSSAgMLRDCLAAHYAGSRFVHVASAAETAALKgkiepqALNNTNRLELF 282
Cdd:cd23934    78 DVevsFTPHLVPMTRGILATI--YAKLKDGVTAE-DVRALYEEFYADEPFVRVLPEGQLPSTK------AVRGSNFCDIG 148
                         170       180
                  ....*....|....*....|...
gi 1752088159 283 VFWNDTRGQVVLVARLDNLGKGA 305
Cdd:cd23934   149 VAVDGRTGRLIVVSAIDNLVKGA 171
Semialdhyde_dh smart00859
Semialdehyde dehydrogenase, NAD binding domain; The semialdehyde dehydrogenase family is found ...
15-115 1.92e-16

Semialdehyde dehydrogenase, NAD binding domain; The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.


Pssm-ID: 214863 [Multi-domain]  Cd Length: 123  Bit Score: 74.12  E-value: 1.92e-16
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159   15 TIFIDGEAGTTGLQIRDLLAAEPGI---VLRSIAPEKRKDIAAKRDLMA---------------EVDIVILCLPDESARE 76
Cdd:smart00859   1 KVAIVGATGYVGQELLRLLAEHPDFeltALAASSRSAGKKVSEAGPHLKgevvleldppdfeelAVDIVFLALPHGVSKE 80
                           90       100       110
                   ....*....|....*....|....*....|....*....
gi 1752088159   77 TVELADSLGPARPRFIDASTAHRVAPGWVYGFPELARGQ 115
Cdd:smart00859  81 SAPLLPRAAAAGAVVIDLSSAFRMDDDVPYGLPEVNPEA 119
AGPR_N cd02280
N-terminal NAD(P)-binding domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) and ...
14-115 3.86e-10

N-terminal NAD(P)-binding domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) and similar proteins; AGPR (EC 1.2.1.38), also called N-acetyl-glutamate semialdehyde dehydrogenase, or NAGSA dehydrogenase, catalyzes the third step in the biosynthesis of arginine from glutamate, the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate into N-acetylglutamate 5-semialdehyde. In bacteria it is a monofunctional protein of 35 to 38kDa (gene argC), while in fungi it is part of a bifunctional mitochondrial enzyme (gene ARG5,6, arg11 or arg-6) which contains a N-terminal acetylglutamate kinase (EC 2.7.2.8) domain and a C-terminal AGPR domain. There are two related families (type 1 and type 2) of N-acetyl-gamma-glutamyl-phosphate reductase, which differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. This family also includes LysY (LysW-L-2-aminoadipate/LysW-L-glutamate phosphate reductase, EC 1.2.1.103/EC 1.2.1.106), which is involved in both the arginine and lysine biosynthetic pathways. Members in this family contain an N-terminal Rossmann fold NAD(P)-binding domain and a C-terminal glyceraldehyde-3-phosphate dehydrogenase (GAPDH)-like domain.


Pssm-ID: 467515 [Multi-domain]  Cd Length: 160  Bit Score: 57.58  E-value: 3.86e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159  14 PTIFIDGEAGTTGLQIRDLLAAEP-------------GIVLRSIAPEKRKDIAAKRDLMAEV----DIVILCLPDESARE 76
Cdd:cd02280     1 PRVAIIGASGYTGLEIVRLLLGHPylrvltlssreraGPKLREYHPSLIISLQIQEFRPCEVlnsaDILVLALPHGASAE 80
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1752088159  77 tveLADSLGPARPRFIDASTAHRV--------------APGWVYGFPELARGQ 115
Cdd:cd02280    81 ---LVAAISNPQVKIIDLSADFRFtdpevyrrhprpdlEGGWVYGLPELDREQ 130
AGPR_1_C_LysY cd23939
C-terminal catalytic domain of [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate reductase ...
129-305 5.38e-10

C-terminal catalytic domain of [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate reductase (LysY) and similar proteins; [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate reductase (LysY; EC 1.2.1.103/EC 1.2.1.106) is involved in both, the arginine and lysine, biosynthetic pathways. LysY interacts with LysW. It may form a ternary complex with LysW and LysZ. Several bacteria and archaea utilize the amino group-carrier protein, LysW, for lysine biosynthesis from alpha-aminoadipate (AAA). In some cases, such as Sulfolobus, LysW is also used to protect the amino group of glutamate in arginine biosynthesis. After LysW modification, AAA and glutamate are converted to lysine and ornithine, respectively, by a single set of enzymes with dual functions. LysY is the third enzyme in lysine biosynthesis from AAA. LysY shows high sequence identity and functional similarities with ArgC, and they are considered to have evolved from a common ancestor.


Pssm-ID: 467688  Cd Length: 174  Bit Score: 57.63  E-value: 5.38e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 129 GCYPTGGIALIRPLVDAGLMRPDfPVTVNAVSGYSGGGRpmiEAYEAGTAP-------AFELYGlmlsHKHLPELTTYSR 201
Cdd:cd23939     1 GCNATASILALYPLVKAGLLDDE-RIVVDVKVGSSGAGA---EASEASHHPersgvvrPYKPTG----HRHTAEIEQELG 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 202 LTRTPI---FVP-SVGNFRqGMLVSVplHIDMLSHVSSAGMLRdCLAAHYAGSRFVHVASAAetaalKGKI---EPQALN 274
Cdd:cd23939    73 LLAREIsvsFTAhSVDMVR-GILATA--HVFLKEGVTEKDLWK-AYRKAYGNEPFVRIVKDR-----KGIYrypDPKLVI 143
                         170       180       190
                  ....*....|....*....|....*....|.
gi 1752088159 275 NTNRLELFVFWNDTRGQVVLVARLDNLGKGA 305
Cdd:cd23939   144 GSNFCDIGFELDEDNGRLVVFSAIDNLMKGA 174
AGPR_C_ARG5_6_like cd23936
C-terminal catalytic domain (AGPR region) of fungal bifunctional mitochondrial enzyme (gene ...
129-305 1.78e-09

C-terminal catalytic domain (AGPR region) of fungal bifunctional mitochondrial enzyme (gene ARG5,6, arg11 or arg-6) and similar proteins; The family includes bifunctional mitochondrial enzyme (gene ARG5,6, arg11 or arg-6) from fungi, which contains a N-terminal acetylglutamate kinase ( EC 2.7.2.8, also known as N-acetyl-L-glutamate 5-phosphotransferase/NAG kinase/AGK) domain and a C-terminal N-acetyl-gamma-glutamyl-phosphate reductase (AGPR; EC 1.2.1.38, also known as AGPR/N-acetyl-glutamate semialdehyde dehydrogenase/NAGSA dehydrogenase) domain. This model corresponds to the AGPR C-terminal catalytic domain. AGPR catalyzes the third step in the biosynthesis of arginine from glutamate, the NADP-dependent reduction of N-acetyl-5-glutamyl phosphate into N-acetylglutamate 5-semialdehyde. The budding yeast member, Arg5,6, is expressed as a precursor that is then maturated in the mitochondria into acetylglutamate kinase and acetylglutamyl-phosphate reductase. It is involved in the arginine biosynthesis pathway, catalyzing the second and third steps in the pathway.


Pssm-ID: 467685  Cd Length: 161  Bit Score: 55.72  E-value: 1.78e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 129 GCYPTGGIALIRPLVDaGLmrpDFPVTVNAVSGYSGggrpmieayeAGT------APAFELYGLM----LSHKHLPELTt 198
Cdd:cd23936     1 GCYATGAQLALAPLLD-DL---DGPPSVFGVSGYSG----------AGTkpspknDPEVLADNLIpyslVGHIHEREVS- 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1752088159 199 ySRLTRTPIFVPSVGNFRQGMLVSVPLHIDmlsHVSSAGMLRDCLAAHYAGSRFVHVASAAetaalkgkiePQALNNTNR 278
Cdd:cd23936    66 -RHLGTPVAFMPHVAPWFQGITLTISIPLK---KSMTADEIRELYQEAYAGEPLIKVTKEI----------PLVRDNAGK 131
                         170       180       190
                  ....*....|....*....|....*....|
gi 1752088159 279 LELFV--FWNDTRG-QVVLVARLDNLGKGA 305
Cdd:cd23936   132 HGVVVggFTVHPDGkRVVVVATIDNLLKGA 161
AGPR_N_ARG5_6_like cd24149
N-terminal NAD(P)-binding domain (AGPR region) of fungal bifunctional mitochondrial enzyme ...
61-113 3.85e-07

N-terminal NAD(P)-binding domain (AGPR region) of fungal bifunctional mitochondrial enzyme (gene ARG5,6, arg11 or arg-6) and similar proteins; The family includes bifunctional mitochondrial enzyme (gene ARG5,6, arg11 or arg-6) from fungi, which contains a N-terminal acetylglutamate kinase ( EC 2.7.2.8, also known as N-acetyl-L-glutamate 5-phosphotransferase/NAG kinase/AGK) domain and a C-terminal N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38, also known as AGPR/N-acetyl-glutamate semialdehyde dehydrogenase/NAGSA dehydrogenase) domain. The model corresponds to the AGPR N-terminal NAD(P)-binding domain. AGPR catalyzes the third step in the biosynthesis of arginine from glutamate, the NADP-dependent reduction of N-acetyl-5-glutamyl phosphate into N-acetylglutamate 5-semialdehyde. The budding yeast member, Arg5,6, is expressed as a precursor that is then maturated in the mitochondria into acetylglutamate kinase and acetylglutamyl-phosphate reductase. It is involved in the arginine biosynthesis pathway, catalyzing the second and third steps in the pathway.


Pssm-ID: 467525 [Multi-domain]  Cd Length: 154  Bit Score: 49.03  E-value: 3.85e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1752088159  61 EVDIVILCLPDESARETVELADSLGPArPRFIDASTAHRVAPGWVYGFPELAR 113
Cdd:cd24149    67 EVDAWVLALPNGVAKPFVDAIDKANPK-SVIVDLSADYRFDDAWTYGLPELNR 118
Semialdhyde_dh pfam01118
Semialdehyde dehydrogenase, NAD binding domain; This Pfam entry contains the following members: ...
53-113 4.61e-06

Semialdehyde dehydrogenase, NAD binding domain; This Pfam entry contains the following members: N-acetyl-glutamine semialdehyde dehydrogenase (AgrC) Aspartate-semialdehyde dehydrogenase


Pssm-ID: 426059 [Multi-domain]  Cd Length: 121  Bit Score: 45.21  E-value: 4.61e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1752088159  53 AAKRDLMAEVDIVILCLPDESAREtveLADSLGPARPRFIDASTAHRVAPGWVYGFPELAR 113
Cdd:pfam01118  58 DVDPEDFKDVDIVFFALPGGVSKE---IAPKLAEAGAKVIDLSSDFRMDDDVPYGLPEVNR 115
AGPR_1_N cd17895
N-terminal NAD(P)-binding domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR), type 1 ...
300-318 8.03e-04

N-terminal NAD(P)-binding domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR), type 1 and similar proteins; AGPR (EC 1.2.1.38), also called N-acetyl-glutamate semialdehyde dehydrogenase, or NAGSA dehydrogenase, catalyzes the NADPH-dependent reduction of N-acetyl-gamma-glutamyl-phosphate phosphate; the third step of arginine biosynthesis. N-acetyl-gamma-glutamyl-phosphate phosphate, the product of the second step catalyzed by acetylglutamate kinase, undergoes reductive dephosphorylation to give N-acetylglutamic semialdehyde, which is converted to ornithine by acetylornithine aminotransferase and acetylornithine deacetylase. AGPR proteins contain an N-terminal Rossmann fold NAD(P)-binding domain and a C-terminal glyceraldehyde-3-phosphate dehydrogenase (GAPDH)-like catalytic domain and are members of the GAPDH superfamily of proteins. NADP(+) binds in a cleft between these domains and contacts both. There are two related families of N-acetyl-gamma-glutamyl-phosphate reductase, which differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. The model corresponds to type 1 AGPR family. Bacterial members of this family tend to be found within Arg biosynthesis operons. The type 1 AGPR family also includes LysY (LysW-L-2-aminoadipate/LysW-L-glutamate phosphate reductase), which is involved in both the arginine and lysine biosynthetic pathways.


Pssm-ID: 467521 [Multi-domain]  Cd Length: 170  Bit Score: 39.33  E-value: 8.03e-04
                          10
                  ....*....|....*....
gi 1752088159 300 NLGKGASGAAVQNLRLMLG 318
Cdd:cd17895   148 NLVKGAAGQAVQNMNLMFG 166
AGPR_1_actinobacAGPR_like cd24148
N-terminal NAD(P)-binding domain of actinobacterial N-acetyl-gamma-glutamyl-phosphate ...
300-318 3.14e-03

N-terminal NAD(P)-binding domain of actinobacterial N-acetyl-gamma-glutamyl-phosphate reductase (actinobacAGPR) and similar proteins; AGPR (EC 1.2.1.38), also called N-acetyl-glutamate semialdehyde dehydrogenase, or NAGSA dehydrogenase, catalyzes the third step in the biosynthesis of arginine from glutamate, the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate into N-acetylglutamate 5-semialdehyde. In bacteria it is a monofunctional protein of 35 to 38kDa (gene argC). There are two related families (type 1 and type 2) of N-acetyl-gamma-glutamyl-phosphate reductase, which differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. The family includes N-acetyl-gamma-glutamyl-phosphate reductases mainly from actinobacteria. They belong to the type 1 AGPR family. Members in this family contain an N-terminal Rossmann fold NAD(P)-binding domain and a C-terminal glyceraldehyde-3-phosphate dehydrogenase (GAPDH)-like domain.


Pssm-ID: 467524 [Multi-domain]  Cd Length: 164  Bit Score: 37.65  E-value: 3.14e-03
                          10
                  ....*....|....*....
gi 1752088159 300 NLGKGASGAAVQNLRLMLG 318
Cdd:cd24148   143 NLGKGTAGQAVQSANLALG 161
AGPR_N cd02280
N-terminal NAD(P)-binding domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) and ...
300-318 5.26e-03

N-terminal NAD(P)-binding domain of N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) and similar proteins; AGPR (EC 1.2.1.38), also called N-acetyl-glutamate semialdehyde dehydrogenase, or NAGSA dehydrogenase, catalyzes the third step in the biosynthesis of arginine from glutamate, the NADPH-dependent reduction of N-acetyl-5-glutamyl phosphate into N-acetylglutamate 5-semialdehyde. In bacteria it is a monofunctional protein of 35 to 38kDa (gene argC), while in fungi it is part of a bifunctional mitochondrial enzyme (gene ARG5,6, arg11 or arg-6) which contains a N-terminal acetylglutamate kinase (EC 2.7.2.8) domain and a C-terminal AGPR domain. There are two related families (type 1 and type 2) of N-acetyl-gamma-glutamyl-phosphate reductase, which differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. This family also includes LysY (LysW-L-2-aminoadipate/LysW-L-glutamate phosphate reductase, EC 1.2.1.103/EC 1.2.1.106), which is involved in both the arginine and lysine biosynthetic pathways. Members in this family contain an N-terminal Rossmann fold NAD(P)-binding domain and a C-terminal glyceraldehyde-3-phosphate dehydrogenase (GAPDH)-like domain.


Pssm-ID: 467515 [Multi-domain]  Cd Length: 160  Bit Score: 37.16  E-value: 5.26e-03
                          10
                  ....*....|....*....
gi 1752088159 300 NLGKGASGAAVQNLRLMLG 318
Cdd:cd02280   142 NLVKGAAGAAVQNLNLALG 160
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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