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Conserved domains on  [gi|1723058392|ref|WP_146653682|]
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DUF6184 family natural product biosynthesis lipoprotein [Labilithrix luteola]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF6184 pfam19682
Family of unknown function (DUF6184); This entry represents a member of a biosynthetic gene ...
 73-154 3.49e-27

Family of unknown function (DUF6184); This entry represents a member of a biosynthetic gene cluster (BGC). This BGC (BGC0000990) is described by MIBiG as an example of the following biosynthetic class, polyketide. It includes a member from the epothilone biosynthetic gene cluster from Sorangium cellulosum. This family appears to be predominantly found in Proteobacteria.


:

Pssm-ID: 437514  Cd Length: 81  Bit Score: 97.10  E-value: 3.49e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1723058392  73 CSREAECDRIGKDGSlYASEDACRANLDGPVRTEMASWRCTPASKDLRFEDCLASIRSAHCETSIDHLSRLTACQSLTLC 152
Cdd:pfam19682   1 CDRYEACGEIGAGKT-YASRSACEVEVRAFWNDEWPAWNCPPAINEKQLDDCLAAIRATSCSSPIDMLARLTVCGQSSLC 79


                  ..
gi 1723058392 153 PP 154
Cdd:pfam19682  80 AP 81
 
Name Accession Description Interval E-value
DUF6184 pfam19682
Family of unknown function (DUF6184); This entry represents a member of a biosynthetic gene ...
 73-154 3.49e-27

Family of unknown function (DUF6184); This entry represents a member of a biosynthetic gene cluster (BGC). This BGC (BGC0000990) is described by MIBiG as an example of the following biosynthetic class, polyketide. It includes a member from the epothilone biosynthetic gene cluster from Sorangium cellulosum. This family appears to be predominantly found in Proteobacteria.


Pssm-ID: 437514  Cd Length: 81  Bit Score: 97.10  E-value: 3.49e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1723058392  73 CSREAECDRIGKDGSlYASEDACRANLDGPVRTEMASWRCTPASKDLRFEDCLASIRSAHCETSIDHLSRLTACQSLTLC 152
Cdd:pfam19682   1 CDRYEACGEIGAGKT-YASRSACEVEVRAFWNDEWPAWNCPPAINEKQLDDCLAAIRATSCSSPIDMLARLTVCGQSSLC 79


                  ..
gi 1723058392 153 PP 154
Cdd:pfam19682  80 AP 81
 
Name Accession Description Interval E-value
DUF6184 pfam19682
Family of unknown function (DUF6184); This entry represents a member of a biosynthetic gene ...
 73-154 3.49e-27

Family of unknown function (DUF6184); This entry represents a member of a biosynthetic gene cluster (BGC). This BGC (BGC0000990) is described by MIBiG as an example of the following biosynthetic class, polyketide. It includes a member from the epothilone biosynthetic gene cluster from Sorangium cellulosum. This family appears to be predominantly found in Proteobacteria.


Pssm-ID: 437514  Cd Length: 81  Bit Score: 97.10  E-value: 3.49e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1723058392  73 CSREAECDRIGKDGSlYASEDACRANLDGPVRTEMASWRCTPASKDLRFEDCLASIRSAHCETSIDHLSRLTACQSLTLC 152
Cdd:pfam19682   1 CDRYEACGEIGAGKT-YASRSACEVEVRAFWNDEWPAWNCPPAINEKQLDDCLAAIRATSCSSPIDMLARLTVCGQSSLC 79


                  ..
gi 1723058392 153 PP 154
Cdd:pfam19682  80 AP 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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