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Conserved domains on  [gi|1693395004|ref|WP_140172619|]
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MULTISPECIES: DmsC/YnfH family molybdoenzyme membrane anchor subunit [Providencia]

Protein Classification

dimethyl sulfoxide reductase anchor subunit family protein( domain architecture ID 10007172)

dimethyl sulfoxide (DMSO) reductase anchor subunit family protein similar to Escherichia coli dimethyl sulfoxide (DMSO) reductase anchor subunit DmsC which anchors the DMSO reductase complex to the periplasmic side of the inner membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DmsC COG3302
DMSO reductase anchor subunit DmsC [Energy production and conversion];
3-298 8.11e-40

DMSO reductase anchor subunit DmsC [Energy production and conversion];


:

Pssm-ID: 442531  Cd Length: 282  Bit Score: 140.41  E-value: 8.11e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693395004   3 EWPLLLFTFLMQTSIGLSVMLALFakkLSAALPHKTNTQFLQQYVFVACVFAGVGLLSSITHLGVPLNAPNSLLNIFSSW 82
Cdd:COG3302     4 EWPLVLFTVLSQAGVGLFLALALA---LLLGLLSPASRKRLLRALLLALVLLGVGLLASTFHLGHPLRAWRAFSNLRTSW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693395004  83 LSREVVFTATYFAFLGLTFLWLWFKKELSFL---LLGLAIIAGLCDVYAMASIYRYTSMLTWMNDNTYLMFYGTMLTAGA 159
Cdd:COG3302    81 LSREIVAAVLFFALAGLYALLAWLGKLPGGLrklLGLLAALLGLALVFAMAMIYQIKTVPTWNTPLTPLNFLLTALALGA 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693395004 160 AGYYLLINLllrfhAGSSAAQVSTCGLWVLWAvigtsLLIRLVYQPIYenylvstSYHNESITFPIDSIHAYQR--IWSL 237
Cdd:COG3302   161 LLAALLLAL-----AGVDLRALKALALLALLA-----LVLALAVLVAY-------LARLASIGSATQTAAALLTreFGHL 223

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1693395004 238 RITSWVVGILAVILLGYGLFRHmrqtasgvmTSSSKGYLVVGFAAAIIAEFMLRYCFYTIH 298
Cdd:COG3302   224 LALRLVLLALGFVLPLLPLLRG---------STAALALLALAFALVLAGELVGRWLFYALA 275
 
Name Accession Description Interval E-value
DmsC COG3302
DMSO reductase anchor subunit DmsC [Energy production and conversion];
3-298 8.11e-40

DMSO reductase anchor subunit DmsC [Energy production and conversion];


Pssm-ID: 442531  Cd Length: 282  Bit Score: 140.41  E-value: 8.11e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693395004   3 EWPLLLFTFLMQTSIGLSVMLALFakkLSAALPHKTNTQFLQQYVFVACVFAGVGLLSSITHLGVPLNAPNSLLNIFSSW 82
Cdd:COG3302     4 EWPLVLFTVLSQAGVGLFLALALA---LLLGLLSPASRKRLLRALLLALVLLGVGLLASTFHLGHPLRAWRAFSNLRTSW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693395004  83 LSREVVFTATYFAFLGLTFLWLWFKKELSFL---LLGLAIIAGLCDVYAMASIYRYTSMLTWMNDNTYLMFYGTMLTAGA 159
Cdd:COG3302    81 LSREIVAAVLFFALAGLYALLAWLGKLPGGLrklLGLLAALLGLALVFAMAMIYQIKTVPTWNTPLTPLNFLLTALALGA 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693395004 160 AGYYLLINLllrfhAGSSAAQVSTCGLWVLWAvigtsLLIRLVYQPIYenylvstSYHNESITFPIDSIHAYQR--IWSL 237
Cdd:COG3302   161 LLAALLLAL-----AGVDLRALKALALLALLA-----LVLALAVLVAY-------LARLASIGSATQTAAALLTreFGHL 223

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1693395004 238 RITSWVVGILAVILLGYGLFRHmrqtasgvmTSSSKGYLVVGFAAAIIAEFMLRYCFYTIH 298
Cdd:COG3302   224 LALRLVLLALGFVLPLLPLLRG---------STAALALLALAFALVLAGELVGRWLFYALA 275
DmsC pfam04976
DMSO reductase anchor subunit (DmsC); The terminal electron transfer enzyme Me2SO reductase of ...
 3-166 5.97e-18

DMSO reductase anchor subunit (DmsC); The terminal electron transfer enzyme Me2SO reductase of Escherichia coli is a heterotrimeric enzyme composed of a membrane extrinsic catalytic dimer (DmsAB) and a membrane intrinsic polytopic anchor subunit (DmsC).


Pssm-ID: 398575  Cd Length: 275  Bit Score: 81.72  E-value: 5.97e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693395004   3 EWPLLLFTFLMQTSIGLSVMLALfakklsaaLPHKTNTQFLQQYV----FVACVFAGVGLLSSITHLGVPLNAPNSLLNI 78
Cdd:pfam04976   7 ELPLVIFTVLAQSVVGAFIVFAF--------VLLFGKNQALRQYVhksmFVLLALLGIGFIASIMHLGSPLRAFNSLNRV 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693395004  79 FSSWLSREVVFTATYFAFLGLTFLWLWFKK---ELSFLLLGLAIIAGLCDVYAMASIYRYTSMLTWMNDNTYLMFYGTML 155
Cdd:pfam04976  79 GASMLSNEIAAGAIFFALAGLYWLVAILGKlppALGHLWLIVTMALGIIFMYMMNMVYHIDTVPTWNTGITTWGFYLTVL 158

                         170
                  ....*....|.
gi 1693395004 156 TAGAAGYYLLI 166
Cdd:pfam04976 159 LGGPTLGYALL 169
 
Name Accession Description Interval E-value
DmsC COG3302
DMSO reductase anchor subunit DmsC [Energy production and conversion];
3-298 8.11e-40

DMSO reductase anchor subunit DmsC [Energy production and conversion];


Pssm-ID: 442531  Cd Length: 282  Bit Score: 140.41  E-value: 8.11e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693395004   3 EWPLLLFTFLMQTSIGLSVMLALFakkLSAALPHKTNTQFLQQYVFVACVFAGVGLLSSITHLGVPLNAPNSLLNIFSSW 82
Cdd:COG3302     4 EWPLVLFTVLSQAGVGLFLALALA---LLLGLLSPASRKRLLRALLLALVLLGVGLLASTFHLGHPLRAWRAFSNLRTSW 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693395004  83 LSREVVFTATYFAFLGLTFLWLWFKKELSFL---LLGLAIIAGLCDVYAMASIYRYTSMLTWMNDNTYLMFYGTMLTAGA 159
Cdd:COG3302    81 LSREIVAAVLFFALAGLYALLAWLGKLPGGLrklLGLLAALLGLALVFAMAMIYQIKTVPTWNTPLTPLNFLLTALALGA 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693395004 160 AGYYLLINLllrfhAGSSAAQVSTCGLWVLWAvigtsLLIRLVYQPIYenylvstSYHNESITFPIDSIHAYQR--IWSL 237
Cdd:COG3302   161 LLAALLLAL-----AGVDLRALKALALLALLA-----LVLALAVLVAY-------LARLASIGSATQTAAALLTreFGHL 223

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1693395004 238 RITSWVVGILAVILLGYGLFRHmrqtasgvmTSSSKGYLVVGFAAAIIAEFMLRYCFYTIH 298
Cdd:COG3302   224 LALRLVLLALGFVLPLLPLLRG---------STAALALLALAFALVLAGELVGRWLFYALA 275
DmsC pfam04976
DMSO reductase anchor subunit (DmsC); The terminal electron transfer enzyme Me2SO reductase of ...
 3-166 5.97e-18

DMSO reductase anchor subunit (DmsC); The terminal electron transfer enzyme Me2SO reductase of Escherichia coli is a heterotrimeric enzyme composed of a membrane extrinsic catalytic dimer (DmsAB) and a membrane intrinsic polytopic anchor subunit (DmsC).


Pssm-ID: 398575  Cd Length: 275  Bit Score: 81.72  E-value: 5.97e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693395004   3 EWPLLLFTFLMQTSIGLSVMLALfakklsaaLPHKTNTQFLQQYV----FVACVFAGVGLLSSITHLGVPLNAPNSLLNI 78
Cdd:pfam04976   7 ELPLVIFTVLAQSVVGAFIVFAF--------VLLFGKNQALRQYVhksmFVLLALLGIGFIASIMHLGSPLRAFNSLNRV 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693395004  79 FSSWLSREVVFTATYFAFLGLTFLWLWFKK---ELSFLLLGLAIIAGLCDVYAMASIYRYTSMLTWMNDNTYLMFYGTML 155
Cdd:pfam04976  79 GASMLSNEIAAGAIFFALAGLYWLVAILGKlppALGHLWLIVTMALGIIFMYMMNMVYHIDTVPTWNTGITTWGFYLTVL 158

                         170
                  ....*....|.
gi 1693395004 156 TAGAAGYYLLI 166
Cdd:pfam04976 159 LGGPTLGYALL 169
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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