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Conserved domains on  [gi|1691269005|ref|WP_139772222|]
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Ig-like domain-containing protein, partial [Salmonella enterica]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Big_13 pfam19077
Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in ...
 117-218 5.72e-27

Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in bacterial cell surface proteins.


:

Pssm-ID: 465968 [Multi-domain]  Cd Length: 102  Bit Score: 100.80  E-value: 5.72e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1691269005 117 TLSTPTITLDSADDSGTAN-DNKTNVKTPGFIIGGIDSDVTQVVVQVMRDGHSEEVElTQTNGQWRFVPGSAWTDGDYTL 195
Cdd:pfam19077   1 TLSIPTIDLAAGSDTGVSDsDNITNDTTPTFTGTNEDGDVVTVTVSIDGNGVTGTAT-AGADGNWSFTPPAALADGTYTL 79

                          90       100
                  ....*....|....*....|...
gi 1691269005 196 TVTVKDEAGNIRHSAPLTVTIDT 218
Cdd:pfam19077  80 TVTVTDIAGNTATSSPLSFTIDT 102
Big_13 pfam19077
Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in ...
 23-116 6.75e-20

Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in bacterial cell surface proteins.


:

Pssm-ID: 465968 [Multi-domain]  Cd Length: 102  Bit Score: 81.93  E-value: 6.75e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1691269005  23 IDRIELLNDTGIVG-DNLTNEARPQFHIT-VPTDVNSVQLSLDGGINWVNATLTSDGVWEYIWPTDLIENTYTLTVKATD 100
Cdd:pfam19077   6 TIDLAAGSDTGVSDsDNITNDTTPTFTGTnEDGDVVTVTVSIDGNGVTGTATAGADGNWSFTPPAALADGTYTLTVTVTD 85

                          90
                  ....*....|....*..
gi 1691269005 101 VAGNTATET-LNFIIDT 116
Cdd:pfam19077  86 IAGNTATSSpLSFTIDT 102
 
Name Accession Description Interval E-value
Big_13 pfam19077
Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in ...
 117-218 5.72e-27

Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in bacterial cell surface proteins.


Pssm-ID: 465968 [Multi-domain]  Cd Length: 102  Bit Score: 100.80  E-value: 5.72e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1691269005 117 TLSTPTITLDSADDSGTAN-DNKTNVKTPGFIIGGIDSDVTQVVVQVMRDGHSEEVElTQTNGQWRFVPGSAWTDGDYTL 195
Cdd:pfam19077   1 TLSIPTIDLAAGSDTGVSDsDNITNDTTPTFTGTNEDGDVVTVTVSIDGNGVTGTAT-AGADGNWSFTPPAALADGTYTL 79

                          90       100
                  ....*....|....*....|...
gi 1691269005 196 TVTVKDEAGNIRHSAPLTVTIDT 218
Cdd:pfam19077  80 TVTVTDIAGNTATSSPLSFTIDT 102
Big_13 pfam19077
Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in ...
 23-116 6.75e-20

Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in bacterial cell surface proteins.


Pssm-ID: 465968 [Multi-domain]  Cd Length: 102  Bit Score: 81.93  E-value: 6.75e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1691269005  23 IDRIELLNDTGIVG-DNLTNEARPQFHIT-VPTDVNSVQLSLDGGINWVNATLTSDGVWEYIWPTDLIENTYTLTVKATD 100
Cdd:pfam19077   6 TIDLAAGSDTGVSDsDNITNDTTPTFTGTnEDGDVVTVTVSIDGNGVTGTATAGADGNWSFTPPAALADGTYTLTVTVTD 85

                          90
                  ....*....|....*..
gi 1691269005 101 VAGNTATET-LNFIIDT 116
Cdd:pfam19077  86 IAGNTATSSpLSFTIDT 102
SO_family_Moco_dimer cd02110
Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved ...
 55-109 2.94e-06

Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved dimerization domain. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO).


Pssm-ID: 239028 [Multi-domain]  Cd Length: 317  Bit Score: 47.68  E-value: 2.94e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1691269005  55 VNSVQLSLDGGINWVNATLTSDGV-------WEYIWptDLIENTYTLTVKATDVAGNTATET 109
Cdd:cd02110   238 IRRVEVSLDGGRTWQEARLEGPLAgprawrqWELDW--DLPPGEYELVARATDSTGNVQPER 297
 
Name Accession Description Interval E-value
Big_13 pfam19077
Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in ...
 117-218 5.72e-27

Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in bacterial cell surface proteins.


Pssm-ID: 465968 [Multi-domain]  Cd Length: 102  Bit Score: 100.80  E-value: 5.72e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1691269005 117 TLSTPTITLDSADDSGTAN-DNKTNVKTPGFIIGGIDSDVTQVVVQVMRDGHSEEVElTQTNGQWRFVPGSAWTDGDYTL 195
Cdd:pfam19077   1 TLSIPTIDLAAGSDTGVSDsDNITNDTTPTFTGTNEDGDVVTVTVSIDGNGVTGTAT-AGADGNWSFTPPAALADGTYTL 79

                          90       100
                  ....*....|....*....|...
gi 1691269005 196 TVTVKDEAGNIRHSAPLTVTIDT 218
Cdd:pfam19077  80 TVTVTDIAGNTATSSPLSFTIDT 102
Big_13 pfam19077
Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in ...
 23-116 6.75e-20

Bacterial Ig-like domain; Presumed domain found as tandem repeats of high sequence identity in bacterial cell surface proteins.


Pssm-ID: 465968 [Multi-domain]  Cd Length: 102  Bit Score: 81.93  E-value: 6.75e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1691269005  23 IDRIELLNDTGIVG-DNLTNEARPQFHIT-VPTDVNSVQLSLDGGINWVNATLTSDGVWEYIWPTDLIENTYTLTVKATD 100
Cdd:pfam19077   6 TIDLAAGSDTGVSDsDNITNDTTPTFTGTnEDGDVVTVTVSIDGNGVTGTATAGADGNWSFTPPAALADGTYTLTVTVTD 85

                          90
                  ....*....|....*..
gi 1691269005 101 VAGNTATET-LNFIIDT 116
Cdd:pfam19077  86 IAGNTATSSpLSFTIDT 102
SO_family_Moco_dimer cd02110
Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved ...
 55-109 2.94e-06

Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved dimerization domain. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO).


Pssm-ID: 239028 [Multi-domain]  Cd Length: 317  Bit Score: 47.68  E-value: 2.94e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1691269005  55 VNSVQLSLDGGINWVNATLTSDGV-------WEYIWptDLIENTYTLTVKATDVAGNTATET 109
Cdd:cd02110   238 IRRVEVSLDGGRTWQEARLEGPLAgprawrqWELDW--DLPPGEYELVARATDSTGNVQPER 297
Big_3_4 pfam13754
Domain of unknown function; This is a family of uncharacterized Clostridiales proteins.
 168-228 1.82e-04

Domain of unknown function; This is a family of uncharacterized Clostridiales proteins.


Pssm-ID: 404618  Cd Length: 105  Bit Score: 39.95  E-value: 1.82e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1691269005 168 SEEVELTQTNGQWRFVPGSAWTDGDYTLTVTVKDEAGNIRHSAPLTVTIDTQIAIDHIELV 228
Cdd:pfam13754  11 GSEVIFDRSDGDWWNVPVPFDEDGEYVVELYAEDEAGNQAYIATILYVVDIENICYHIRPL 71
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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