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Conserved domains on  [gi|1690722527|ref|WP_139500342|]
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DUF2931 family protein, partial [Escherichia coli]

Protein Classification

DUF2931 family protein( domain architecture ID 38681)

DUF2931 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2931 super family cl12703
Protein of unknown function (DUF2931); This entry represents a set of lipoproteins that ...
 32-115 1.15e-11

Protein of unknown function (DUF2931); This entry represents a set of lipoproteins that contain an N-terminal lipoprotein attachment site.


The actual alignment was detected with superfamily member pfam11153:

Pssm-ID: 431686  Cd Length: 190  Bit Score: 58.30  E-value: 1.15e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1690722527  32 LAPYDEWYFLFFYPNALPAQVTYVELLDTDGiyyqfrtLDATAPSSTTIGQWRDNL---RVGVLSFNKAKNPPMSIHFCW 108
Cdd:pfam11153   8 TQPYFEWSVGVGSPKHYPAEVTIGDILDTDG-------YLSTPRGGNKDEGWGTEVsfyRVGGGLPIDVKPLPDRLVIEW 80


                  ....*..
gi 1690722527 109 DSVIDKK 115
Cdd:pfam11153  81 VSLIDKK 87
 
Name Accession Description Interval E-value
DUF2931 pfam11153
Protein of unknown function (DUF2931); This entry represents a set of lipoproteins that ...
 32-115 1.15e-11

Protein of unknown function (DUF2931); This entry represents a set of lipoproteins that contain an N-terminal lipoprotein attachment site.


Pssm-ID: 431686  Cd Length: 190  Bit Score: 58.30  E-value: 1.15e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1690722527  32 LAPYDEWYFLFFYPNALPAQVTYVELLDTDGiyyqfrtLDATAPSSTTIGQWRDNL---RVGVLSFNKAKNPPMSIHFCW 108
Cdd:pfam11153   8 TQPYFEWSVGVGSPKHYPAEVTIGDILDTDG-------YLSTPRGGNKDEGWGTEVsfyRVGGGLPIDVKPLPDRLVIEW 80


                  ....*..
gi 1690722527 109 DSVIDKK 115
Cdd:pfam11153  81 VSLIDKK 87
 
Name Accession Description Interval E-value
DUF2931 pfam11153
Protein of unknown function (DUF2931); This entry represents a set of lipoproteins that ...
 32-115 1.15e-11

Protein of unknown function (DUF2931); This entry represents a set of lipoproteins that contain an N-terminal lipoprotein attachment site.


Pssm-ID: 431686  Cd Length: 190  Bit Score: 58.30  E-value: 1.15e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1690722527  32 LAPYDEWYFLFFYPNALPAQVTYVELLDTDGiyyqfrtLDATAPSSTTIGQWRDNL---RVGVLSFNKAKNPPMSIHFCW 108
Cdd:pfam11153   8 TQPYFEWSVGVGSPKHYPAEVTIGDILDTDG-------YLSTPRGGNKDEGWGTEVsfyRVGGGLPIDVKPLPDRLVIEW 80


                  ....*..
gi 1690722527 109 DSVIDKK 115
Cdd:pfam11153  81 VSLIDKK 87
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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