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Conserved domains on  [gi|1606980544|ref|WP_135022187|]
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NAD(P)/FAD-dependent oxidoreductase [Mammaliicoccus lentus]

Protein Classification

NAD(P)/FAD-dependent oxidoreductase( domain architecture ID 11422994)

NAD(P)/FAD-dependent oxidoreductase catalyzes the transfer of electrons from one molecule, the electron donor or reductant, to another molecule, the electron acceptor or oxidant

CATH:  3.50.50.60
EC:  1.-.-.-
Gene Ontology:  GO:0050660|GO:0016491
PubMed:  33684359

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
2-300 3.82e-57

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


:

Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 187.63  E-value: 3.82e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   2 TDVTIIGGGPAGLFASFYSGLRGMSVRIVDfQDKLGGKMHVYPEkvIWDIGALAPK-PCYEVIQDLVEQGLHFNPEVCLG 80
Cdd:COG0492     1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIE-GGEPGGQLATTKE--IENYPGFPEGiSGPELAERLREQAERFGAEILLE 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  81 EkVVDIQKvEEQHFIISTDKDNEYHSKSiiiavgggiikpL---------TLDIEGAERFELSNLNY-VVQSIQKYKDKH 150
Cdd:COG0492    78 E-VTSVDK-DDGPFRVTTDDGTEYEAKA------------ViiatgagprKLGLPGEEEFEGRGVSYcATCDGFFFRGKD 143

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 151 ILISGAGNSALDWACDLSEYAKSVTICYRKEEISGHEHMKNLLEKLDVIKkpsmVIkqLNSQPD----KPVISEVVLEYV 226
Cdd:COG0492   144 VVVVGGGDSALEEALYLTKFASKVTLIHRRDELRASKILVERLRANPKIE----VL--WNTEVTeiegDGRVEGVTLKNV 217

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1606980544 227 ETKEQEVIPVEEVIISHGFDRESELLhnAQTKVNLVNDFFIEGLGNTQTSVQGIFGAGDILKHdaKAHLIASCF 300
Cdd:COG0492   218 KTGEEKELEVDGVFVAIGLKPNTELL--KGLGLELDEDGYIVVDEDMETSVPGVFAAGDVRDY--KYRQAATAA 287
 
Name Accession Description Interval E-value
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
2-300 3.82e-57

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 187.63  E-value: 3.82e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   2 TDVTIIGGGPAGLFASFYSGLRGMSVRIVDfQDKLGGKMHVYPEkvIWDIGALAPK-PCYEVIQDLVEQGLHFNPEVCLG 80
Cdd:COG0492     1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIE-GGEPGGQLATTKE--IENYPGFPEGiSGPELAERLREQAERFGAEILLE 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  81 EkVVDIQKvEEQHFIISTDKDNEYHSKSiiiavgggiikpL---------TLDIEGAERFELSNLNY-VVQSIQKYKDKH 150
Cdd:COG0492    78 E-VTSVDK-DDGPFRVTTDDGTEYEAKA------------ViiatgagprKLGLPGEEEFEGRGVSYcATCDGFFFRGKD 143

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 151 ILISGAGNSALDWACDLSEYAKSVTICYRKEEISGHEHMKNLLEKLDVIKkpsmVIkqLNSQPD----KPVISEVVLEYV 226
Cdd:COG0492   144 VVVVGGGDSALEEALYLTKFASKVTLIHRRDELRASKILVERLRANPKIE----VL--WNTEVTeiegDGRVEGVTLKNV 217

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1606980544 227 ETKEQEVIPVEEVIISHGFDRESELLhnAQTKVNLVNDFFIEGLGNTQTSVQGIFGAGDILKHdaKAHLIASCF 300
Cdd:COG0492   218 KTGEEKELEVDGVFVAIGLKPNTELL--KGLGLELDEDGYIVVDEDMETSVPGVFAAGDVRDY--KYRQAATAA 287
TRX_reduct TIGR01292
thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a ...
 3-289 8.55e-21

thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport]


Pssm-ID: 273540 [Multi-domain]  Cd Length: 299  Bit Score: 90.76  E-value: 8.55e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   3 DVTIIGGGPAGLFASFYSGLRGMSVRIVDFQDKlGGKMHV------YPekviwdiGALAPKPCYEVIQDLVEQGLHFNPE 76
Cdd:TIGR01292   1 DVIIIGAGPAGLTAAIYAARANLKPLLIEGMEP-GGQLTTttevenYP-------GFPEGISGPELMEKMKEQAVKFGAE 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  77 VclgeKVVDIQKVE--EQHFIISTDKDNEYHSKSiiiAVGGGIIKPLTLDIEGAERFelsnlnyvvqsIQK--------- 145
Cdd:TIGR01292  73 I----IYEEVIKVDksDRPFKVYTGDGKEYTAKA---VIIATGASARKLGIPGEDEF-----------WGRgvsycatcd 134

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 146 ---YKDKHILISGAGNSALDWACDLSEYAKSVTICYRKEEISGHehmKNLLEKLDviKKPSMVIkQLNSQPDKPV----I 218
Cdd:TIGR01292 135 gpfFKNKEVAVVGGGDSAIEEALYLTRIAKKVTLVHRRDKFRAE---KILLDRLK--KNPKIEF-LWNSTVEEIVgdnkV 208

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1606980544 219 SEVVLEYVETKEQEVIPVEEVIISHGFDRESELLHNAqtkVNLVNDFFIEGLGNTQTSVQGIFGAGDILKH 289
Cdd:TIGR01292 209 EGVKIKNTVTGEEEELEVDGVFIAIGHEPNTELLKGL---LELDENGYIVTDEGMRTSVPGVFAAGDVRDK 276
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 2-286 1.04e-17

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 82.37  E-value: 1.04e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   2 TDVTIIGGGPAGLFASFYSGLRGMSVRIVDFqdklgGKMHVY----PEKVIWDIG-----ALAPKPCYEVIQDLVEQgLH 72
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIED-----EGTCPYggcvLSKALLGAAeapeiASLWADLYKRKEEVVKK-LN 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  73 FNPEVCLGEKVVDIQKvEEQHFIISTDKDNEYHSKSIIIAVGGGIIKPLTLDIEGAER---FELSNLNYVVQSIQKYKDK 149
Cdd:pfam07992  75 NGIEVLLGTEVVSIDP-GAKKVVLEELVDGDGETITYDRLVIATGARPRLPPIPGVELnvgFLVRTLDSAEALRLKLLPK 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 150 HILISGAGNSALDWACDLSEYAKSVTICYR--------KEEISghEHMKNLLEKLDVIKKPSMVIKQLNSQPDKPVisev 221
Cdd:pfam07992 154 RVVVVGGGYIGVELAAALAKLGKEVTLIEAldrllrafDEEIS--AALEKALEKNGVEVRLGTSVKEIIGDGDGVE---- 227

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 222 vleyVETKEQEVIPVEEVIISHGFDRESELLHNAQTKVN-----LVNDFFieglgntQTSVQGIFGAGDI 286
Cdd:pfam07992 228 ----VILKDGTEIDADLVVVAIGRRPNTELLEAAGLELDerggiVVDEYL-------RTSVPGIYAAGDC 286
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 4-286 3.08e-10

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 60.96  E-value: 3.08e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   4 VTIIGGGPAGLFASFYSGLRGMSVRIVDFQDKLGGKMhVY--PE-KViwdigalaPKpcyEVIQDLVEQ----GLHFNPE 76
Cdd:PRK11749  143 VAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGGLL-RYgiPEfRL--------PK---DIVDREVERllklGVEIRTN 210

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  77 VCLGeKVVDIQKVEEQH---FIiSTdkdneyhsksiiiavggGIIKPLTLDIEGaerfelSNLNYVVQSI---------- 143
Cdd:PRK11749  211 TEVG-RDITLDELRAGYdavFI-GT-----------------GAGLPRFLGIPG------ENLGGVYSAVdfltrvnqav 265

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 144 ---QKYKDKHILISGAGNSALDWA-CDLSEYAKSVTICYR--KEEISGHEH-MKNLLEKldvikkpsMVIKQLNSQP--- 213
Cdd:PRK11749  266 adyDLPVGKRVVVIGGGNTAMDAArTAKRLGAESVTIVYRrgREEMPASEEeVEHAKEE--------GVEFEWLAAPvei 337

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 214 --DKPVISEVVLEYVETKEQE--------------VIPVEEVIISHGFDRESELLHNAQT-KVN----LVNDFfieglGN 272
Cdd:PRK11749  338 lgDEGRVTGVEFVRMELGEPDasgrrrvpiegsefTLPADLVIKAIGQTPNPLILSTTPGlELNrwgtIIADD-----ET 412

                         330
                  ....*....|....
gi 1606980544 273 TQTSVQGIFGAGDI 286
Cdd:PRK11749  413 GRTSLPGVFAGGDI 426
 
Name Accession Description Interval E-value
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
2-300 3.82e-57

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 187.63  E-value: 3.82e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   2 TDVTIIGGGPAGLFASFYSGLRGMSVRIVDfQDKLGGKMHVYPEkvIWDIGALAPK-PCYEVIQDLVEQGLHFNPEVCLG 80
Cdd:COG0492     1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIE-GGEPGGQLATTKE--IENYPGFPEGiSGPELAERLREQAERFGAEILLE 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  81 EkVVDIQKvEEQHFIISTDKDNEYHSKSiiiavgggiikpL---------TLDIEGAERFELSNLNY-VVQSIQKYKDKH 150
Cdd:COG0492    78 E-VTSVDK-DDGPFRVTTDDGTEYEAKA------------ViiatgagprKLGLPGEEEFEGRGVSYcATCDGFFFRGKD 143

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 151 ILISGAGNSALDWACDLSEYAKSVTICYRKEEISGHEHMKNLLEKLDVIKkpsmVIkqLNSQPD----KPVISEVVLEYV 226
Cdd:COG0492   144 VVVVGGGDSALEEALYLTKFASKVTLIHRRDELRASKILVERLRANPKIE----VL--WNTEVTeiegDGRVEGVTLKNV 217

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1606980544 227 ETKEQEVIPVEEVIISHGFDRESELLhnAQTKVNLVNDFFIEGLGNTQTSVQGIFGAGDILKHdaKAHLIASCF 300
Cdd:COG0492   218 KTGEEKELEVDGVFVAIGLKPNTELL--KGLGLELDEDGYIVVDEDMETSVPGVFAAGDVRDY--KYRQAATAA 287
TRX_reduct TIGR01292
thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a ...
 3-289 8.55e-21

thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport]


Pssm-ID: 273540 [Multi-domain]  Cd Length: 299  Bit Score: 90.76  E-value: 8.55e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   3 DVTIIGGGPAGLFASFYSGLRGMSVRIVDFQDKlGGKMHV------YPekviwdiGALAPKPCYEVIQDLVEQGLHFNPE 76
Cdd:TIGR01292   1 DVIIIGAGPAGLTAAIYAARANLKPLLIEGMEP-GGQLTTttevenYP-------GFPEGISGPELMEKMKEQAVKFGAE 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  77 VclgeKVVDIQKVE--EQHFIISTDKDNEYHSKSiiiAVGGGIIKPLTLDIEGAERFelsnlnyvvqsIQK--------- 145
Cdd:TIGR01292  73 I----IYEEVIKVDksDRPFKVYTGDGKEYTAKA---VIIATGASARKLGIPGEDEF-----------WGRgvsycatcd 134

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 146 ---YKDKHILISGAGNSALDWACDLSEYAKSVTICYRKEEISGHehmKNLLEKLDviKKPSMVIkQLNSQPDKPV----I 218
Cdd:TIGR01292 135 gpfFKNKEVAVVGGGDSAIEEALYLTRIAKKVTLVHRRDKFRAE---KILLDRLK--KNPKIEF-LWNSTVEEIVgdnkV 208

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1606980544 219 SEVVLEYVETKEQEVIPVEEVIISHGFDRESELLHNAqtkVNLVNDFFIEGLGNTQTSVQGIFGAGDILKH 289
Cdd:TIGR01292 209 EGVKIKNTVTGEEEELEVDGVFIAIGHEPNTELLKGL---LELDENGYIVTDEGMRTSVPGVFAAGDVRDK 276
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 2-286 1.04e-17

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 82.37  E-value: 1.04e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   2 TDVTIIGGGPAGLFASFYSGLRGMSVRIVDFqdklgGKMHVY----PEKVIWDIG-----ALAPKPCYEVIQDLVEQgLH 72
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIED-----EGTCPYggcvLSKALLGAAeapeiASLWADLYKRKEEVVKK-LN 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  73 FNPEVCLGEKVVDIQKvEEQHFIISTDKDNEYHSKSIIIAVGGGIIKPLTLDIEGAER---FELSNLNYVVQSIQKYKDK 149
Cdd:pfam07992  75 NGIEVLLGTEVVSIDP-GAKKVVLEELVDGDGETITYDRLVIATGARPRLPPIPGVELnvgFLVRTLDSAEALRLKLLPK 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 150 HILISGAGNSALDWACDLSEYAKSVTICYR--------KEEISghEHMKNLLEKLDVIKKPSMVIKQLNSQPDKPVisev 221
Cdd:pfam07992 154 RVVVVGGGYIGVELAAALAKLGKEVTLIEAldrllrafDEEIS--AALEKALEKNGVEVRLGTSVKEIIGDGDGVE---- 227

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 222 vleyVETKEQEVIPVEEVIISHGFDRESELLHNAQTKVN-----LVNDFFieglgntQTSVQGIFGAGDI 286
Cdd:pfam07992 228 ----VILKDGTEIDADLVVVAIGRRPNTELLEAAGLELDerggiVVDEYL-------RTSVPGIYAAGDC 286
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 4-286 3.08e-10

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 60.96  E-value: 3.08e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   4 VTIIGGGPAGLFASFYSGLRGMSVRIVDFQDKLGGKMhVY--PE-KViwdigalaPKpcyEVIQDLVEQ----GLHFNPE 76
Cdd:PRK11749  143 VAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGGLL-RYgiPEfRL--------PK---DIVDREVERllklGVEIRTN 210

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  77 VCLGeKVVDIQKVEEQH---FIiSTdkdneyhsksiiiavggGIIKPLTLDIEGaerfelSNLNYVVQSI---------- 143
Cdd:PRK11749  211 TEVG-RDITLDELRAGYdavFI-GT-----------------GAGLPRFLGIPG------ENLGGVYSAVdfltrvnqav 265

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 144 ---QKYKDKHILISGAGNSALDWA-CDLSEYAKSVTICYR--KEEISGHEH-MKNLLEKldvikkpsMVIKQLNSQP--- 213
Cdd:PRK11749  266 adyDLPVGKRVVVIGGGNTAMDAArTAKRLGAESVTIVYRrgREEMPASEEeVEHAKEE--------GVEFEWLAAPvei 337

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 214 --DKPVISEVVLEYVETKEQE--------------VIPVEEVIISHGFDRESELLHNAQT-KVN----LVNDFfieglGN 272
Cdd:PRK11749  338 lgDEGRVTGVEFVRMELGEPDasgrrrvpiegsefTLPADLVIKAIGQTPNPLILSTTPGlELNrwgtIIADD-----ET 412

                         330
                  ....*....|....
gi 1606980544 273 TQTSVQGIFGAGDI 286
Cdd:PRK11749  413 GRTSLPGVFAGGDI 426
Pyr_redox_3 pfam13738
Pyridine nucleotide-disulphide oxidoreductase;
72-284 3.49e-10

Pyridine nucleotide-disulphide oxidoreductase;


Pssm-ID: 404603 [Multi-domain]  Cd Length: 296  Bit Score: 59.93  E-value: 3.49e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  72 HFNPEVCLGEKVVDIQKvEEQHFIISTDKDnEYHSK---------SiiiavgggiiKPLTLDIEgaerfELSNLNYVVQS 142
Cdd:pfam13738  87 HFELPINLFEEVTSVKK-EDDGFVVTTSKG-TYQARyviiatgefD----------FPNKLGVP-----ELPKHYSYVKD 149

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 143 IQKYKDKHILISGAGNSALDWACDLSEYAKSVTICYRKEEISGHE---------HMKNLLEKLDVIKKPSMVikqLNSQP 213
Cdd:pfam13738 150 FHPYAGQKVVVIGGYNSAVDAALELVRKGARVTVLYRGSEWEDRDsdpsyslspDTLNRLEELVKNGKIKAH---FNAEV 226

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1606980544 214 DKpvISEVVLEY-VETKEQEVIPVE-EVIISHGFDRESELLHNAQTKVN-----LVNDffieglgNTQ-TSVQGIFGAG 284
Cdd:pfam13738 227 KE--ITEVDVSYkVHTEDGRKVTSNdDPILATGYHPDLSFLKKGLFELDedgrpVLTE-------ETEsTNVPGLFLAG 296
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 4-286 1.79e-09

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 58.61  E-value: 1.79e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   4 VTIIGGGPAGLFASFYSGLRGMSVRIVDFQDKLGGKMHvY-------PEKVI-WDIgalapkpcyEVIQDL-VEqgLHFN 74
Cdd:COG0493   124 VAVVGSGPAGLAAAYQLARAGHEVTVFEALDKPGGLLR-YgipefrlPKDVLdREI---------ELIEALgVE--FRTN 191

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  75 PEVclGeKVVDIQKVEEQH---FI-ISTdkdneyhsksiiiavgggiIKPLTLDIEGAER--------FeLSNLNYVVQS 142
Cdd:COG0493   192 VEV--G-KDITLDELLEEFdavFLaTGA-------------------GKPRDLGIPGEDLkgvhsamdF-LTAVNLGEAP 248

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 143 IQK-YKDKHILISGAGNSALDWA-CDLSEYAKSVTICYRKeeisGHEHMKNLLEKLD------VIKKPSMVIKQLNSQPD 214
Cdd:COG0493   249 DTIlAVGKRVVVIGGGNTAMDCArTALRLGAESVTIVYRR----TREEMPASKEEVEealeegVEFLFLVAPVEIIGDEN 324

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 215 KPViSEVVLEYVE---------------TKEQEVIPVEEVIISHGFDRESELLhNAQTKVNLVNDFFIEGLGNT-QTSVQ 278
Cdd:COG0493   325 GRV-TGLECVRMElgepdesgrrrpvpiEGSEFTLPADLVILAIGQTPDPSGL-EEELGLELDKRGTIVVDEETyQTSLP 402


                  ....*...
gi 1606980544 279 GIFGAGDI 286
Cdd:COG0493   403 GVFAGGDA 410
PRK12770 PRK12770
putative glutamate synthase subunit beta; Provisional
 4-287 1.16e-08

putative glutamate synthase subunit beta; Provisional


Pssm-ID: 237197 [Multi-domain]  Cd Length: 352  Bit Score: 55.77  E-value: 1.16e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   4 VTIIGGGPAGLFASFYSGLRGMSVRIVDFQDKLGGKM-HVYPEKVIwdigalaPKP-CYEVIQDLVEQG--LHFNPEVCL 79
Cdd:PRK12770   21 VAIIGAGPAGLAAAGYLACLGYEVHVYDKLPEPGGLMlFGIPEFRI-------PIErVREGVKELEEAGvvFHTRTKVCC 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  80 GEKvvdIQKVEEQHFIISTDKDNEYHSKSIIIAVGGGIIKPLTLDIEGAE------------RFELSNLNYVVQ-SIQKY 146
Cdd:PRK12770   94 GEP---LHEEEGDEFVERIVSLEELVKKYDAVLIATGTWKSRKLGIPGEDlpgvysaleylfRIRAAKLGYLPWeKVPPV 170

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 147 KDKHILISGAGNSALDWACD-LSEYAKSVTICYR--KEEISGHEHMKNLLEKLDV----------------IKKPSMVIK 207
Cdd:PRK12770  171 EGKKVVVVGAGLTAVDAALEaVLLGAEKVYLAYRrtINEAPAGKYEIERLIARGVeflelvtpvriigegrVEGVELAKM 250

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 208 QLnSQPDKPVISEVVleyVETKEQEVIPVEEVIISHGfdresEL----LHNAQTKVNLVNDFFIEGLGNTQTSVQGIFGA 283
Cdd:PRK12770  251 RL-GEPDESGRPRPV---PIPGSEFVLEADTVVFAIG-----EIptppFAKECLGIELNRKGEIVVDEKHMTSREGVFAA 321


                  ....
gi 1606980544 284 GDIL 287
Cdd:PRK12770  322 GDVV 325
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 1-179 1.95e-08

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 55.25  E-value: 1.95e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   1 MTDVTIIGGGPAGLFASFYsgLR--GMSVRIVDFQDKLGG----------------KMHVYPEKVIW-DIGALAPKPcyE 61
Cdd:COG2072     6 HVDVVVIGAGQAGLAAAYH--LRraGIDFVVLEKADDVGGtwrdnrypglrldtpsHLYSLPFFPNWsDDPDFPTGD--E 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  62 V---IQDLVEqglHFN--PEVCLGEKVVDIQKVEE-QHFIISTDKDNEYHSK---------SiiiavgggiiKPLTLDIE 126
Cdd:COG2072    82 IlayLEAYAD---KFGlrRPIRFGTEVTSARWDEAdGRWTVTTDDGETLTARfvvvatgplS----------RPKIPDIP 148

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1606980544 127 GAERFEL-----SNLNYVVQsiqkYKDKHILISGAGNSALDWACDLSEYAKSVTICYR 179
Cdd:COG2072   149 GLEDFAGeqlhsADWRNPVD----LAGKRVLVVGTGASAVQIAPELARVAAHVTVFQR 202
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 4-288 2.90e-08

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 55.27  E-value: 2.90e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   4 VTIIGGGPAGLFASFYSGLRGMSVRIVDFQDKLGGKMHvypekviWDIgalapkPCYEV--------IQDLVEQGLhfnp 75
Cdd:PRK12771  140 VAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMR-------YGI------PAYRLprevldaeIQRILDLGV---- 202

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  76 EVCLGEKV---VDIQKVEEQH---FI-ISTDKDNeyhsksiiiavgggiikplTLDIEGAE------------RFELSNL 136
Cdd:PRK12771  203 EVRLGVRVgedITLEQLEGEFdavFVaIGAQLGK-------------------RLPIPGEDaagvldavdflrAVGEGEP 263

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 137 NYVvqsiqkykDKHILISGAGNSALDwACDLSEY--AKSVTICYR--KEEISGHEH-----------MKNLLEKLDVIKK 201
Cdd:PRK12771  264 PFL--------GKRVVVIGGGNTAMD-AARTARRlgAEEVTIVYRrtREDMPAHDEeieealregveINWLRTPVEIEGD 334

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 202 PSMVIKQLNSQPdkpviseVVLEYVE-------TKEQEVIPVEEVIISHGFDRESELLHNAQTkVNLVNDFFIEGLGNTQ 274
Cdd:PRK12771  335 ENGATGLRVITV-------EKMELDEdgrpspvTGEEETLEADLVVLAIGQDIDSAGLESVPG-VEVGRGVVQVDPNFMM 406

                         330
                  ....*....|....
gi 1606980544 275 TSVQGIFGAGDILK 288
Cdd:PRK12771  407 TGRPGVFAGGDMVP 420
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 1-84 5.96e-07

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 50.99  E-value: 5.96e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   1 MTDVTIIGGGPAGLFASFYSGLRGMSVRIVDFQDKLGGKMHVYPEK-VIWDIGA---LAPKPcyeVIQDLVEqglhfnpE 76
Cdd:COG1232     1 MKRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGLIRTVEVDgFRIDRGPhsfLTRDP---EVLELLR-------E 70


                  ....*...
gi 1606980544  77 VCLGEKVV 84
Cdd:COG1232    71 LGLGDELV 78
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 1-53 2.39e-05

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 46.00  E-value: 2.39e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1606980544   1 MTDVTIIGGGPAGLFASFYSGLRGMSVRIVDFQDKLGGKMHVYPEK-VIWDIGA 53
Cdd:COG1233     3 MYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGGRARTFERPgFRFDVGP 56
HI0933_like pfam03486
HI0933-like protein;
2-39 2.43e-05

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 45.65  E-value: 2.43e-05
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1606980544   2 TDVTIIGGGPAGLFASFYSGLRGMSVRIVDFQDKLGGK 39
Cdd:pfam03486   1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGRK 38
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
 4-184 3.16e-05

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 45.87  E-value: 3.16e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   4 VTIIGGGPAGLFASFYSGLRGMSVRIVDFQDKLGGKMHvY-------PEKVI-WDIgalAPkpcyeviqdLVEQGLHFNP 75
Cdd:PRK12814  196 VAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGMMR-YgiprfrlPESVIdADI---AP---------LRAMGAEFRF 262

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  76 EVCLGeKVVDIQKVEEQHfiistdkDNEYhsksiiiaVGGGIIKPLTLDIEGAErfelsnLNYVVQSIQKYKD------- 148
Cdd:PRK12814  263 NTVFG-RDITLEELQKEF-------DAVL--------LAVGAQKASKMGIPGEE------LPGVISGIDFLRNvalgtal 320

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1606980544 149 ---KHILISGAGNSALDWA-CDLSEYAKSVTICYR--KEEIS 184
Cdd:PRK12814  321 hpgKKVVVIGGGNTAIDAArTALRLGAESVTILYRrtREEMP 362
YhiN COG2081
Predicted flavoprotein YhiN [General function prediction only];
6-39 2.04e-04

Predicted flavoprotein YhiN [General function prediction only];


Pssm-ID: 441684 [Multi-domain]  Cd Length: 402  Bit Score: 42.73  E-value: 2.04e-04
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1606980544   6 IIGGGPAGLFASFYSGLRGMSVRIVDFQDKLGGK 39
Cdd:COG2081     2 VIGAGAAGLMAAITAAERGARVLLLEKNPKVGRK 35
PRK12778 PRK12778
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ...
 4-291 4.36e-04

bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;


Pssm-ID: 237200 [Multi-domain]  Cd Length: 752  Bit Score: 42.04  E-value: 4.36e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   4 VTIIGGGPAGLFASFYSGLRGMSVRIVDFQDKLGGKMhVY--PEKVIwdigalaPKPCYEV-IQDLVEQGLHFNPEVCLG 80
Cdd:PRK12778  434 VAVIGSGPAGLSFAGDLAKRGYDVTVFEALHEIGGVL-KYgiPEFRL-------PKKIVDVeIENLKKLGVKFETDVIVG 505

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  81 eKVVDIQKVEEQHFiistdkDNEYHSKSIIIavgggiikPLTLDIEGaerfelSNLNYVVQS---------IQKYKD--- 148
Cdd:PRK12778  506 -KTITIEELEEEGF------KGIFIASGAGL--------PNFMNIPG------ENSNGVMSSneyltrvnlMDAASPdsd 564

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 149 ------KHILISGAGNSALDWA-CDLSEYAKSVTICYRKEEisghEHMKNLLEKLDVIKKPSMVIKQLNS-----QPDKP 216
Cdd:PRK12778  565 tpikfgKKVAVVGGGNTAMDSArTAKRLGAERVTIVYRRSE----EEMPARLEEVKHAKEEGIEFLTLHNpieylADEKG 640

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544 217 VISEVVLEYVETKE---------------QEVIPVEEVIISHGFDrESELLHNAQTKVNLVNDFFIEGLGNTQTSVQGIF 281
Cdd:PRK12778  641 WVKQVVLQKMELGEpdasgrrrpvaipgsTFTVDVDLVIVSVGVS-PNPLVPSSIPGLELNRKGTIVVDEEMQSSIPGIY 719

                         330
                  ....*....|
gi 1606980544 282 GAGDILKHDA 291
Cdd:PRK12778  720 AGGDIVRGGA 729
Pyr_redox pfam00070
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 150-196 5.30e-04

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 425450 [Multi-domain]  Cd Length: 80  Bit Score: 38.34  E-value: 5.30e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 1606980544 150 HILISGAGNSALDWACDLSEYAKSVTICYRKEEI---SGHEHMKNLLEKL 196
Cdd:pfam00070   1 RVVVVGGGYIGLELAGALARLGSKVTVVERRDRLlpgFDPEIAKILQEKL 50
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
6-41 8.52e-04

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 37.13  E-value: 8.52e-04
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 1606980544   6 IIGGGPAGLFASFYSGLRGMSVRIVDFQDKLGGKMH 41
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNAY 36
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 2-31 2.26e-03

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 39.62  E-value: 2.26e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 1606980544   2 TDVTIIGGGPAGLFASFYSGLRGMSVRIVD 31
Cdd:pfam01494   2 TDVLIVGGGPAGLMLALLLARAGVRVVLVE 31
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 1-38 2.40e-03

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 39.68  E-value: 2.40e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1606980544   1 MTDVTIIGGGPAGLFASFYSGLRGMSVRIVDfQDKLGG 38
Cdd:COG1249     3 DYDLVVIGAGPGGYVAAIRAAQLGLKVALVE-KGRLGG 39
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 1-31 2.66e-03

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 39.15  E-value: 2.66e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1606980544   1 MTDVTIIGGGPAGLFASFYSGLRGMSVRIVD 31
Cdd:COG0654     3 RTDVLIVGGGPAGLALALALARAGIRVTVVE 33
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 4-103 3.15e-03

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 39.30  E-value: 3.15e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   4 VTIIGGGPAGL-FASFYSGLrGMSVRIVDFQDKLGGKMHVypekviwDIGAlapkpcyEVIQDLVEQGLhfnpEVCLGEK 82
Cdd:COG1249   171 LVVIGGGYIGLeFAQIFARL-GSEVTLVERGDRLLPGEDP-------EISE-------ALEKALEKEGI----DILTGAK 231

                          90       100
                  ....*....|....*....|.
gi 1606980544  83 VVDIQKVEEQHFIISTDKDNE 103
Cdd:COG1249   232 VTSVEKTGDGVTVTLEDGGGE 252
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
3-107 4.43e-03

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 38.56  E-value: 4.43e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544   3 DVTIIGGGPAGLFASFY---SGL------RGMSVR-----IVDFQDKLG-------------------GK---------- 39
Cdd:COG2509    32 DVVIVGAGPAGLFAALElaeAGLkplvleRGKDVEertcpVAEFWRKGKcnpesniqfgeggagtfsdGKlntrskdpqg 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1606980544  40 -----MHVY-----PEKVIWDigalaPKP------CYEVIQDLVEQGLHFNPEVCLGEKVVDIQKVEEQHFIISTDKDNE 103
Cdd:COG2509   112 liryvLEIFvkfgaPEEILYA-----AKPhigtdkLPKVVKNIREYIEELGGEIRFNTRVTDILIEDGRVKGVVTNDGEE 186


                  ....
gi 1606980544 104 YHSK 107
Cdd:COG2509   187 IEAD 190
TIGR00275 TIGR00275
flavoprotein, HI0933 family; The model when searched with a partial length search brings in ...
 6-39 5.13e-03

flavoprotein, HI0933 family; The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 272992 [Multi-domain]  Cd Length: 400  Bit Score: 38.35  E-value: 5.13e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1606980544   6 IIGGGPAGLFASFYSGLRGMSVRIVDFQDKLGGK 39
Cdd:TIGR00275   2 IIGGGAAGLMAAITAARAGLSVLLLEKNKKIGKK 35
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
1-31 8.54e-03

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 37.96  E-value: 8.54e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1606980544   1 MTDVTIIGGGPAGLFASFYSGLRGMSVRIVD 31
Cdd:PRK06183   10 DTDVVIVGAGPVGLTLANLLGQYGVRVLVLE 40
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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