|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11742 |
PRK11742 |
bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional |
19-593 |
0e+00 |
|
bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional
Pssm-ID: 236965 [Multi-domain] Cd Length: 575 Bit Score: 1336.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 19 VVVELHNRFGAEAFTAQPTVTGMPVLWVQRARLIEILTFLRQMPKPYVMLYDLHGVDERLRTKRRGLPDADFTVFYHLMS 98
Cdd:PRK11742 1 VIGELRNRFGPDAFTVQATRTGIPVVWVKREQLLEVLRFLRKLPKPYVMLFDLHGIDERLRTHREGLPAADFTVFYHLIS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 99 IERNSDVMIKVALSESDLSMPTITGIWPNANWYEREVWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDFPARATEFDPYS 178
Cdd:PRK11742 81 IERNRDIMLKVALSENDLHVPTITKIFPNANWYERETWDMFGITFDGHPHLRRILMPPTWEGHPLRKDYPARATEFDPFE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 179 LTLAKQQLEEEAARFRPEDWGMKRSGTNEDYMFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMAERQS 258
Cdd:PRK11742 161 LTKAKQDLEMEALRFKPEEWGMKRGTDNEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 259 WHSYIPYTDRIDYLGGVMNNLPYVLSVEKLAGITVPDRVNVIRIMMSEFFRITSHLLFLGTYIQDVGAMTPVFFTFTDRQ 338
Cdd:PRK11742 241 WHSYIPYTDRIDYLGGCMNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIGTFIQDVGAMTPVFFAFTDRQ 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 339 RAYTVIEAVTGFRLHPAWFRIGGVAHDLPRGWEKLVKDFIDWMPKRLDEYTKAALQNSILKGRTVGVAAYNTKEALEWGV 418
Cdd:PRK11742 321 KIYDVIEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLDEYEKAALRNSILKGRTQGVAAYNAKEALEWGV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 419 TGPSLRATGLDFDLRKARPYSGYENFEFEVPLAHDGDAYDRCIVRVEEMRQSLKIIEQCMRNMPAGPYKADHPLTTPPPK 498
Cdd:PRK11742 401 TGAGLRATGIDFDVRKARPYSGYENFDFEVPVGGNGDCYDRVMVKVEEMRQSLRIIEQCLDNMPEGPFKADHPLTTPPPK 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 499 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPSVIKGSMVADLI 578
Cdd:PRK11742 481 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSFAHLQQIPSVIRGSLVSDLI 560
|
570
....*....|....*
gi 1598135522 579 AYLGSIDFVMADVDR 593
Cdd:PRK11742 561 VYLGSIDFVMSDVDR 575
|
|
| NuoD |
COG0649 |
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]; ... |
206-593 |
0e+00 |
|
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]; NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440414 [Multi-domain] Cd Length: 390 Bit Score: 670.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 206 NEDYMFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSYIPYTDRIDYLGGVMNNLPYVLSV 285
Cdd:COG0649 3 ETEEMVLNMGPQHPSTHGVLRLVLELDGETVVDADPHIGYLHRGFEKLAENRTYTQIIPYTDRLDYLSPMNNELAYVLAV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 286 EKLAGITVPDRVNVIRIMMSEFFRITSHLLFLGTYIQDVGAMTPVFFTFTDRQRAYTVIEAVTGFRLHPAWFRIGGVAHD 365
Cdd:COG0649 83 EKLLGIEVPERAQYIRVILAELNRIASHLLWLGTYALDLGAMTPFLYAFREREKILDLFEEVTGARMTHNYFRIGGVRRD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 366 LPRGWEKLVKDFIDWMPKRLDEYTKAALQNSILKGRTVGVAAYNTKEALEWGVTGPSLRATGLDFDLRKARPYSGYENFE 445
Cdd:COG0649 163 LPDGFLEKVREFLDYFPKRLDEYEDLLTGNRIFKARTKGVGVLSAEDAIALGVTGPVLRASGVDYDLRKDEPYSGYDELD 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 446 FEVPLAHDGDAYDRCIVRVEEMRQSLKIIEQCMRNMPAGPYKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANE 525
Cdd:COG0649 243 FDVPVGTEGDCYDRYLVRMEEMRQSLRIIRQCLDKLPEGPVMAKDPKIAPPPKEEMKTSMEALIHHFKLVTEGFKVPAGE 322
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1598135522 526 SFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPSVIKGSMVADLIAYLGSIDFVMADVDR 593
Cdd:COG0649 323 VYAAVESPRGELGFYLVSDGGTKPYRVKIRSPSFANLQALPEMLKGHMLADVVAILGSLDIVLGEVDR 390
|
|
| NuoD |
TIGR01962 |
NADH dehydrogenase I, D subunit; This model recognizes specificially the D subunit of NADH ... |
208-593 |
0e+00 |
|
NADH dehydrogenase I, D subunit; This model recognizes specificially the D subunit of NADH dehydrogenase I complex. It excludes the related chain of NAD(P)H-quinone oxidoreductases from chloroplast and Synechocystis, where the quinone may be plastoquinone rather than ubiquinone. This subunit often appears as a C/D fusion. [Energy metabolism, Electron transport]
Pssm-ID: 273898 Cd Length: 386 Bit Score: 630.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 208 DYMFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSYIPYTDRIDYLGGVMNNLPYVLSVEK 287
Cdd:TIGR01962 1 EFMILNLGPQHPSTHGVLRLILELDGEYVVRADPHIGYLHRGTEKLAENRTYQQYIPYTDRLDYLSPFSNELAYCLAVEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 288 LAGITVPDRVNVIRIMMSEFFRITSHLLFLGTYIQDVGAMTPVFFTFTDRQRAYTVIEAVTGFRLHPAWFRIGGVAHDLP 367
Cdd:TIGR01962 81 LLGIEVPRRAQVIRVMLSELNRISSHLLFIGTHALDLGAMTPFLYAFREREKILDLFEAITGARMHSAYFRIGGVALDLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 368 RGWEKLVKDFIDWMPKRLDEYTKAALQNSILKGRTVGVAAYNTKEALEWGVTGPSLRATGLDFDLRKARPYSGYENFEFE 447
Cdd:TIGR01962 161 ENWLEEIREFLEQFPKRLRDYETLLNENRIWKQRTQGVGVVSAKDALDWGLTGPMLRGSGIDWDIRKSEPYEGYDEYDFD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 448 VPLAHDGDAYDRCIVRVEEMRQSLKIIEQCMRNMPAGPYKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESF 527
Cdd:TIGR01962 241 VPVGGNGDCYDRYLLRVLEMRESIKIIEQCLEKMPPGPIKADNPKLAPPPKERMLTSMEALIHHFKLVTEGFRVPAGEVY 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1598135522 528 QMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPSVIKGSMVADLIAYLGSIDFVMADVDR 593
Cdd:TIGR01962 321 VPIESPKGELGFYIISDGGTKPYRLKIRAPSFAHLQALEAMCVGHYLADLIAILGSIDPVMGEVDR 386
|
|
| Complex1_49kDa |
pfam00346 |
Respiratory-chain NADH dehydrogenase, 49 Kd subunit; |
324-593 |
9.97e-158 |
|
Respiratory-chain NADH dehydrogenase, 49 Kd subunit;
Pssm-ID: 459772 Cd Length: 270 Bit Score: 452.22 E-value: 9.97e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 324 VGAMTPVFFTFTDRQRAYTVIEAVTGFRLHPAWFRIGGVAHDLPRGWEKLVKDFIDWMPKRLDEYTKAALQNSILKGRTV 403
Cdd:pfam00346 1 LGAMTPFLYAFREREKILDLFERITGARMTHSYFRPGGVARDLPEGFLEKIREFLDYFPKRLDEYEDLLTRNRIFKDRTK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 404 GVAAYNTKEALEWGVTGPSLRATGLDFDLRKARPYSGYENFEFEVPLAHDGDAYDRCIVRVEEMRQSLKIIEQCMRNMPA 483
Cdd:pfam00346 81 GVGVLSAEDALALGVTGPMLRASGVPWDLRKDEPYSGYDELDFDVPVGTEGDCYDRYLVRMEEMRQSLRIIRQCLDKLPE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 484 GPYKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQ 563
Cdd:pfam00346 161 GPVMADDPKIALPPKEEMKTSMEALIHHFKLVTEGFRVPAGEVYVAVEAPKGELGFYLVSDGGTKPYRVKIRAPSFANLQ 240
|
250 260 270
....*....|....*....|....*....|
gi 1598135522 564 QIPSVIKGSMVADLIAYLGSIDFVMADVDR 593
Cdd:pfam00346 241 ALPEMCKGHMLADVVAIIGSIDIVMGEVDR 270
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11742 |
PRK11742 |
bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional |
19-593 |
0e+00 |
|
bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional
Pssm-ID: 236965 [Multi-domain] Cd Length: 575 Bit Score: 1336.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 19 VVVELHNRFGAEAFTAQPTVTGMPVLWVQRARLIEILTFLRQMPKPYVMLYDLHGVDERLRTKRRGLPDADFTVFYHLMS 98
Cdd:PRK11742 1 VIGELRNRFGPDAFTVQATRTGIPVVWVKREQLLEVLRFLRKLPKPYVMLFDLHGIDERLRTHREGLPAADFTVFYHLIS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 99 IERNSDVMIKVALSESDLSMPTITGIWPNANWYEREVWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDFPARATEFDPYS 178
Cdd:PRK11742 81 IERNRDIMLKVALSENDLHVPTITKIFPNANWYERETWDMFGITFDGHPHLRRILMPPTWEGHPLRKDYPARATEFDPFE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 179 LTLAKQQLEEEAARFRPEDWGMKRSGTNEDYMFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMAERQS 258
Cdd:PRK11742 161 LTKAKQDLEMEALRFKPEEWGMKRGTDNEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 259 WHSYIPYTDRIDYLGGVMNNLPYVLSVEKLAGITVPDRVNVIRIMMSEFFRITSHLLFLGTYIQDVGAMTPVFFTFTDRQ 338
Cdd:PRK11742 241 WHSYIPYTDRIDYLGGCMNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYIGTFIQDVGAMTPVFFAFTDRQ 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 339 RAYTVIEAVTGFRLHPAWFRIGGVAHDLPRGWEKLVKDFIDWMPKRLDEYTKAALQNSILKGRTVGVAAYNTKEALEWGV 418
Cdd:PRK11742 321 KIYDVIEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLDEYEKAALRNSILKGRTQGVAAYNAKEALEWGV 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 419 TGPSLRATGLDFDLRKARPYSGYENFEFEVPLAHDGDAYDRCIVRVEEMRQSLKIIEQCMRNMPAGPYKADHPLTTPPPK 498
Cdd:PRK11742 401 TGAGLRATGIDFDVRKARPYSGYENFDFEVPVGGNGDCYDRVMVKVEEMRQSLRIIEQCLDNMPEGPFKADHPLTTPPPK 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 499 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPSVIKGSMVADLI 578
Cdd:PRK11742 481 ERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSFAHLQQIPSVIRGSLVSDLI 560
|
570
....*....|....*
gi 1598135522 579 AYLGSIDFVMADVDR 593
Cdd:PRK11742 561 VYLGSIDFVMSDVDR 575
|
|
| PRK13292 |
PRK13292 |
NADH-quinone oxidoreductase subunit B/C/D; |
10-593 |
0e+00 |
|
NADH-quinone oxidoreductase subunit B/C/D;
Pssm-ID: 183955 [Multi-domain] Cd Length: 788 Bit Score: 726.18 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 10 PPHKADDQEVVVELHNRFGaEAFTAQPTVTGMPVLWVQRARLIEILTFLRQ-MPKPYVMLYDLHGVDERLRTKRRGLPDa 88
Cdd:PRK13292 215 PKHPYPDFGLAGELEGAFG-DDVRLDEGATDMLTYRCPPELVPEVLRHLKKrASSPFRRLEDLAAVDESCRRDREKFPD- 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 89 dFTVFYHLMSIERNSDVMIKVALSESDLSMPTITGIWPNANWYEREVWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDFP 168
Cdd:PRK13292 293 -FTVNYHLLSFDTPGHVRIKTELRGRTPELPSATGVFPAANWYEREAFDMFGIRFAGHPNLRRILMPPDWEGHPLRKEHP 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 169 ARATEFDPYSLtlakqqleEEAARFRPEDWGMKRSGTNEDYMFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHR 248
Cdd:PRK13292 372 FRATEMPPYTR--------DDARRLQPLPAGDFFDRVDEETLILNLGPQHPGTHGIIRFVLKLDGEEIVDMDSDIGYHHR 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 249 GAEKMAERQSWHSYIPYTDRIDYLGGVMNNLPYVLSVEKLAGITVPDRVNVIRIMMSEFFRITSHLLFLGTYIQDVGAMT 328
Cdd:PRK13292 444 GAEKIGERQHWNQFIPYTDRIDYLAGVQNNLAYVNSVETLCGIEVPDRAIYIRVMLSELFRIANHLVWLGTFAADVGAMT 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 329 PVFFTFTDRQRAYTVIEAVTGFRLHPAWFRIGGVAHDLPRGWEKLVKDFIDWMPKRLDEYTKAALQNSILKGRTVGVAAY 408
Cdd:PRK13292 524 PVFYTFTDREKIFDIVEMITGGRMHPAWFRIGGVAEDLPEGWKEAVEAFLRWFPGRLKEYEDLLTGNPIFKARLKGVGVI 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 409 NTKEALEWGVTGPSLRATGLDFDLRKARPYSGYENFEFEVPLAHDGDAYDRCIVRVEEMRQSLKIIEQCMRNMPAGPYKA 488
Cdd:PRK13292 604 TRDEAVEWGISGPNLRACGLAWDLRKKMPYGGYDRFDFEVPTAEGGDCYARYLVRMEEMRQSLRIVRQAAAGMPGGRWIS 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 489 DHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPSV 568
Cdd:PRK13292 684 DDYRYVLPQKRDTLKDIESLIHHFVNVTRGPAPPKGECYAAIEAPKGENGYFVVSDGLNIAYRMRIRTPSFPHIQALPLL 763
|
570 580
....*....|....*....|....*
gi 1598135522 569 IKGSMVADLIAYLGSIDFVMADVDR 593
Cdd:PRK13292 764 SRGWLVADFLAIIGSIDFVLADLDR 788
|
|
| NuoD |
COG0649 |
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]; ... |
206-593 |
0e+00 |
|
NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) [Energy production and conversion]; NADH:ubiquinone oxidoreductase 49 kD subunit (chain D) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440414 [Multi-domain] Cd Length: 390 Bit Score: 670.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 206 NEDYMFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSYIPYTDRIDYLGGVMNNLPYVLSV 285
Cdd:COG0649 3 ETEEMVLNMGPQHPSTHGVLRLVLELDGETVVDADPHIGYLHRGFEKLAENRTYTQIIPYTDRLDYLSPMNNELAYVLAV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 286 EKLAGITVPDRVNVIRIMMSEFFRITSHLLFLGTYIQDVGAMTPVFFTFTDRQRAYTVIEAVTGFRLHPAWFRIGGVAHD 365
Cdd:COG0649 83 EKLLGIEVPERAQYIRVILAELNRIASHLLWLGTYALDLGAMTPFLYAFREREKILDLFEEVTGARMTHNYFRIGGVRRD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 366 LPRGWEKLVKDFIDWMPKRLDEYTKAALQNSILKGRTVGVAAYNTKEALEWGVTGPSLRATGLDFDLRKARPYSGYENFE 445
Cdd:COG0649 163 LPDGFLEKVREFLDYFPKRLDEYEDLLTGNRIFKARTKGVGVLSAEDAIALGVTGPVLRASGVDYDLRKDEPYSGYDELD 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 446 FEVPLAHDGDAYDRCIVRVEEMRQSLKIIEQCMRNMPAGPYKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANE 525
Cdd:COG0649 243 FDVPVGTEGDCYDRYLVRMEEMRQSLRIIRQCLDKLPEGPVMAKDPKIAPPPKEEMKTSMEALIHHFKLVTEGFKVPAGE 322
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1598135522 526 SFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPSVIKGSMVADLIAYLGSIDFVMADVDR 593
Cdd:COG0649 323 VYAAVESPRGELGFYLVSDGGTKPYRVKIRSPSFANLQALPEMLKGHMLADVVAILGSLDIVLGEVDR 390
|
|
| NuoD |
TIGR01962 |
NADH dehydrogenase I, D subunit; This model recognizes specificially the D subunit of NADH ... |
208-593 |
0e+00 |
|
NADH dehydrogenase I, D subunit; This model recognizes specificially the D subunit of NADH dehydrogenase I complex. It excludes the related chain of NAD(P)H-quinone oxidoreductases from chloroplast and Synechocystis, where the quinone may be plastoquinone rather than ubiquinone. This subunit often appears as a C/D fusion. [Energy metabolism, Electron transport]
Pssm-ID: 273898 Cd Length: 386 Bit Score: 630.91 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 208 DYMFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSYIPYTDRIDYLGGVMNNLPYVLSVEK 287
Cdd:TIGR01962 1 EFMILNLGPQHPSTHGVLRLILELDGEYVVRADPHIGYLHRGTEKLAENRTYQQYIPYTDRLDYLSPFSNELAYCLAVEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 288 LAGITVPDRVNVIRIMMSEFFRITSHLLFLGTYIQDVGAMTPVFFTFTDRQRAYTVIEAVTGFRLHPAWFRIGGVAHDLP 367
Cdd:TIGR01962 81 LLGIEVPRRAQVIRVMLSELNRISSHLLFIGTHALDLGAMTPFLYAFREREKILDLFEAITGARMHSAYFRIGGVALDLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 368 RGWEKLVKDFIDWMPKRLDEYTKAALQNSILKGRTVGVAAYNTKEALEWGVTGPSLRATGLDFDLRKARPYSGYENFEFE 447
Cdd:TIGR01962 161 ENWLEEIREFLEQFPKRLRDYETLLNENRIWKQRTQGVGVVSAKDALDWGLTGPMLRGSGIDWDIRKSEPYEGYDEYDFD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 448 VPLAHDGDAYDRCIVRVEEMRQSLKIIEQCMRNMPAGPYKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESF 527
Cdd:TIGR01962 241 VPVGGNGDCYDRYLLRVLEMRESIKIIEQCLEKMPPGPIKADNPKLAPPPKERMLTSMEALIHHFKLVTEGFRVPAGEVY 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1598135522 528 QMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPSVIKGSMVADLIAYLGSIDFVMADVDR 593
Cdd:TIGR01962 321 VPIESPKGELGFYIISDGGTKPYRLKIRAPSFAHLQALEAMCVGHYLADLIAILGSIDPVMGEVDR 386
|
|
| PRK06075 |
PRK06075 |
NADH-quinone oxidoreductase subunit D; |
208-593 |
8.90e-171 |
|
NADH-quinone oxidoreductase subunit D;
Pssm-ID: 180385 [Multi-domain] Cd Length: 392 Bit Score: 490.44 E-value: 8.90e-171
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 208 DYMFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSYIPYTDRIDYLGGVMNNLPYVLSVEK 287
Cdd:PRK06075 5 RNYTLNFGPQHPAAHGVLRLILELDGEVVVRADPHIGYLHRGTEKLAEYRTYLQAIPYFDRLDYVSPMNNEHAYCLAVEK 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 288 LAGITVPDRVNVIRIMMSEFFRITSHLLFLGTYIQDVGAMTPVFFTFTDRQRAYTVIEAVTGFRLHPAWFRIGGVAHDLP 367
Cdd:PRK06075 85 LLGIEVPERAQYIRVLFLELNRILSHLLWLGTHALDLGAMTVFLWGFREREKLLDLYEAVTGARMHHAYIRPGGVRRDLP 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 368 RGWEKLVKDFIDWMPKRLDEYTKAALQNSILKGRTVGVAAYNTKEALEWGVTGPSLRATGLDFDLRKARPYSGYENFEFE 447
Cdd:PRK06075 165 DGLLEDIRDFLDYFPKRLDDYETLLTDNRIWKQRLVGVGVVSKERALALGFTGPMLRASGVAWDLRKSQPYEVYDELDFD 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 448 VPLAHDGDAYDRCIVRVEEMRQSLKIIEQCMRNM--PAGPYKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANE 525
Cdd:PRK06075 245 VPVGKNGDCYDRYLVRVEEMRQSLRIIEQCLDRLrpPPGPVMVDDPKIAPPARLEMKTSMEALIHHFKLVTEGFRVPAGE 324
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1598135522 526 SFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPSVIKGSMVADLIAYLGSIDFVMADVDR 593
Cdd:PRK06075 325 VYAAVESPKGEFGVYLVSDGGNKPYRVKIRAPSFAHLQALDEMCRGHMLADVVAIIGSLDIVFGEVDR 392
|
|
| Complex1_49kDa |
pfam00346 |
Respiratory-chain NADH dehydrogenase, 49 Kd subunit; |
324-593 |
9.97e-158 |
|
Respiratory-chain NADH dehydrogenase, 49 Kd subunit;
Pssm-ID: 459772 Cd Length: 270 Bit Score: 452.22 E-value: 9.97e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 324 VGAMTPVFFTFTDRQRAYTVIEAVTGFRLHPAWFRIGGVAHDLPRGWEKLVKDFIDWMPKRLDEYTKAALQNSILKGRTV 403
Cdd:pfam00346 1 LGAMTPFLYAFREREKILDLFERITGARMTHSYFRPGGVARDLPEGFLEKIREFLDYFPKRLDEYEDLLTRNRIFKDRTK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 404 GVAAYNTKEALEWGVTGPSLRATGLDFDLRKARPYSGYENFEFEVPLAHDGDAYDRCIVRVEEMRQSLKIIEQCMRNMPA 483
Cdd:pfam00346 81 GVGVLSAEDALALGVTGPMLRASGVPWDLRKDEPYSGYDELDFDVPVGTEGDCYDRYLVRMEEMRQSLRIIRQCLDKLPE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 484 GPYKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQ 563
Cdd:pfam00346 161 GPVMADDPKIALPPKEEMKTSMEALIHHFKLVTEGFRVPAGEVYVAVEAPKGELGFYLVSDGGTKPYRVKIRAPSFANLQ 240
|
250 260 270
....*....|....*....|....*....|
gi 1598135522 564 QIPSVIKGSMVADLIAYLGSIDFVMADVDR 593
Cdd:pfam00346 241 ALPEMCKGHMLADVVAIIGSIDIVMGEVDR 270
|
|
| PRK12322 |
PRK12322 |
NADH-quinone oxidoreductase subunit D; |
210-593 |
1.74e-142 |
|
NADH-quinone oxidoreductase subunit D;
Pssm-ID: 183437 [Multi-domain] Cd Length: 366 Bit Score: 417.18 E-value: 1.74e-142
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 210 MFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSYIPYTDRIDYLGGVMNNLPYVLSVEKLA 289
Cdd:PRK12322 7 MLLNVGPQHPSTHGVFRLVLKIDGEIIVEATPVIGYLHRGTEKLAESLQYTQIIPYTDRMDYLSAMTNNYVYCHAVETMM 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 290 GITVPDRVNVIRIMMSEFFRITSHLLFLGTYIQDVGAMTPVFFTFTDRQRAYTVIEAVTGFRLHPAWFRIGGVAHDLPRG 369
Cdd:PRK12322 87 GLEVPERAEYLRVIAMELGRIASHLVWWGTYLLDIGAVSPFLYAFREREMIINLLNELCGARLTFNYMRIGGVKWDAPDG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 370 WEKLVKDFIDWMPKRLDEYTKAALQNSILKGRTVGVAAYNTKEALEWGVTGPSLRATGLDFDLRKARPYSGYENFEFEVP 449
Cdd:PRK12322 167 WIEKVKEFVPYMREQLAGYHDLVTGNEIFLNRVKGVGIYSAEEAISYSLSGVNLRCTGVNWDLRKDEPYSIYDRFDFDIP 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 450 LAHDGDAYDRCIVRVEEMRQSLKIIEQCMRNMP-AGPYKADHPLTTPPPKertlqhietlithflqvswgpvmpaNESFQ 528
Cdd:PRK12322 247 VGSVGDCWDRYVCRMQEIEQSLKIIEQAVEQFPkEGPVLAKVPKIIKAPK-------------------------GEAYV 301
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1598135522 529 MIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPSVIKGSMVADLIAYLGSIDFVMADVDR 593
Cdd:PRK12322 302 RIESPRGEIGCYIASDGKKKPYRLKFRRPSFYNLQILPKLLKGENIANLIAILGSIDIVLGEVDG 366
|
|
| PRK07415 |
PRK07415 |
NAD(P)H-quinone oxidoreductase subunit H; Validated |
200-593 |
1.68e-116 |
|
NAD(P)H-quinone oxidoreductase subunit H; Validated
Pssm-ID: 180969 [Multi-domain] Cd Length: 394 Bit Score: 351.73 E-value: 1.68e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 200 MKRSGTNEDYMFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSYIPYTDRIDYLGGVMNNL 279
Cdd:PRK07415 1 MAQLETRTEPMVLNFGPHHPSMHGVLRLIVTLDGEDVVDCEPVIGYLHRGMEKIAENRTNVMYVPYVSRWDYAAGMFNEA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 280 PYVLSVEKLAGITVPDRVNVIRIMMSEFFRITSHLLFLGTYIQDVGAMTPVFFTFTDRQRAYTVIEAVTGFRL-HPAWFR 358
Cdd:PRK07415 81 ITVNAPEKLANIPVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFREREMIYDLWEAATGQRLiNNNYFR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 359 IGGVAHDLPRGWEKLVKDFIDWMPKRLDEYTKAALQNSILKGRTVGVAAYNTKEALEWGVTGPSLRATGLDFDLRKARPY 438
Cdd:PRK07415 161 IGGVAADLPYGWLEKCLDFCDYFGPKIDEYEKLITNNPIFRRRIEGLGTISREEAINWGLSGPMLRASGVKWDLRKVDHY 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 439 SGYENFEFEVPLAHDGDAYDRCIVRVEEMRQSLKIIEQCMRNMPAGPY---KADHPLTTPPPKERTLQHietlitHFLQV 515
Cdd:PRK07415 241 ECYDDFDWDVAWETEGDCLARYRVRIEEMRESVKIIRQACKGIPGGPYenlEAKRMAEGKKSEWNGFDY------QYVAK 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 516 SWGPV--MPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPSVIKGSMVADLIAYLGSIDFVMADVDR 593
Cdd:PRK07415 315 KVAPTfkIPNGELYVRLESGKGELGIFIQGNNDVTPWRWKIRAADFNNLQILPHLLKGAKVADIMAILGSIDVIMGSVDR 394
|
|
| ndhH |
CHL00017 |
NADH dehydrogenase subunit 7 |
200-593 |
2.03e-103 |
|
NADH dehydrogenase subunit 7
Pssm-ID: 176960 Cd Length: 393 Bit Score: 318.18 E-value: 2.03e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 200 MKRSGTNEDYMFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSYIPYTDRIDYLGGVMNNL 279
Cdd:CHL00017 1 MTVPATRKDLMIVNMGPHHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 280 PYVLSVEKLAGITVPDRVNVIRIMMSEFFRITSHLLFLGTYIQDVGAMTPVFFTFTDRQRAYTVIEAVTGFRLHPAWFRI 359
Cdd:CHL00017 81 ITVNAPEQLGNIQVPKRASYIRVIMLELSRIASHLLWLGPFMADIGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 360 GGVAHDLPRGWEKLVKDFIDWMPKRLDEYTKAALQNSILKGRTVGVAAYNTKEALEWGVTGPSLRATGLDFDLRKARPYS 439
Cdd:CHL00017 161 GGVAADLPYGWIDKCLDFCDYFLTGVAEYQKLITRNPIFLERVEGVGIIGGEEAINWGLSGPMLRASGIQWDLRKVDHYE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 440 GYENFEFEVPLAHDGDAYDRCIVRVEEMRQSLKIIEQCMRNMPAGPYKADHPLTTPPPKERTLQHIEtliTHFLQVSWGP 519
Cdd:CHL00017 241 CYDEFDWEVQWQKEGDSLARYLVRIGEMTESIKIIQQALEGIPGGPYENLEARRFDREKDSEWNDFE---YRFISKKPSP 317
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1598135522 520 V--MPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPSVIKGSMVADLIAYLGSIDFVMADVDR 593
Cdd:CHL00017 318 TfeLSKQELYVRVEAPKGELGIFLIGDDSVFPWRWKIRPPGFINLQILPQLVKRMKLADIMTILGSIDIIMGEVDR 393
|
|
| NuoC |
COG0852 |
NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) [Energy production and conversion]; ... |
14-183 |
6.50e-63 |
|
NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) [Energy production and conversion]; NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440613 [Multi-domain] Cd Length: 164 Bit Score: 204.29 E-value: 6.50e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 14 ADDQEVVVELHNRFGaEAFTAQPTVTGMPVLWVQRARLIEILTFLRQmPKPYVMLYDLHGVDERLRTKRrglpdadFTVF 93
Cdd:COG0852 2 SELEELLEALEEKFG-DAVLEVEEARGELTLTVPPEDLVDVARFLRD-DLGFDHLSDLTGVDYPERGDR-------FEVV 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 94 YHLMSIERNSDVMIKVALSESDLSMPTITGIWPNANWYEREVWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDFPARATE 173
Cdd:COG0852 73 YHLLSLTHNRRLRLKVFVPRDDPVVPSVTDVWPGANWHEREAYDMFGIVFEGHPDLRRILLPEDWEGHPLRKDFPLEGYV 152
|
170
....*....|
gi 1598135522 174 FDPYSLTLAK 183
Cdd:COG0852 153 EVRYDEELKR 162
|
|
| Complex1_30kDa |
pfam00329 |
Respiratory-chain NADH dehydrogenase, 30 Kd subunit; |
44-173 |
5.22e-55 |
|
Respiratory-chain NADH dehydrogenase, 30 Kd subunit;
Pssm-ID: 459763 [Multi-domain] Cd Length: 121 Bit Score: 181.91 E-value: 5.22e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 44 LWVQRARLIEILTFLRQMPKPYVMLYDLHGVDERlrtkrrglPDADFTVFYHLMSIERNSDVMIKVALSEsDLSMPTITG 123
Cdd:pfam00329 1 VTVDPEDLLEVARFLRDDELGFDHLSDLTGVDYP--------EEGRFEVVYHLLSITHNVRVRVKVPLED-DPVVPSVTD 71
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1598135522 124 IWPNANWYEREVWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDFPARATE 173
Cdd:pfam00329 72 IWPGANWYEREVYDMFGIVFEGHPDLRRILLPEDWEGHPLRKDFPLTGYV 121
|
|
| NuoC_fam |
TIGR01961 |
NADH (or F420H2) dehydrogenase, subunit C; This model describes the C subunit of the NADH ... |
42-171 |
8.26e-50 |
|
NADH (or F420H2) dehydrogenase, subunit C; This model describes the C subunit of the NADH dehydrogenase complex I in bacteria, as well as many instances of the corresponding mitochondrial subunit (NADH dehydrogenase subunit 9) and of the F420H2 dehydrogenase in Methanosarcina. Complex I contains subunits designated A-N. This C subunit often occurs as a fusion protein with the D subunit. This model excludes the NAD(P)H and plastoquinone-dependent form of chloroplasts and [Energy metabolism, Electron transport]
Pssm-ID: 273897 [Multi-domain] Cd Length: 121 Bit Score: 168.18 E-value: 8.26e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 42 PVLWVQRARLIEILTFLRQMPKPYVMLYDLHGVDeRLRTKRrglpdadFTVFYHLMSIERNSDVMIKVALSESDlSMPTI 121
Cdd:TIGR01961 1 LVVWIKKEQLLEVLTFLKDPALGFELLTDVSGVD-YPKEKR-------FEVVYHLLSIKKNRRIRLKVRLSEDD-PVPSL 71
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1598135522 122 TGIWPNANWYEREVWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDFPARA 171
Cdd:TIGR01961 72 TSVFPTANWYERETYDMYGIVFDGHPDLRRILMPDDFEGHPLRKDYPLTG 121
|
|
| PRK06074 |
PRK06074 |
NADH dehydrogenase subunit C; Provisional |
46-168 |
1.59e-38 |
|
NADH dehydrogenase subunit C; Provisional
Pssm-ID: 235691 [Multi-domain] Cd Length: 189 Bit Score: 140.04 E-value: 1.59e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 46 VQRARLIEILTFLRQMPKP-YVMLYDLHGVDERLRTKRrglpdadFTVFYHLMSIERNSDVMIKVALSEsDLSMPTITGI 124
Cdd:PRK06074 33 VPAEKILEVLTFLRDDPELrFEQLIDLTGVDYPERGKR-------FEVVYHLLSYKHNVRLRVKVRAPE-DPVVPSVVDI 104
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1598135522 125 WPNANWYEREVWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDFP 168
Cdd:PRK06074 105 WPSANWYEREAYDLYGIVFEGHPDLRRILTDYGFEGHPLRKDFP 148
|
|
| HycE1 |
COG3262 |
Ni,Fe-hydrogenase III component G [Energy production and conversion]; |
22-499 |
1.87e-32 |
|
Ni,Fe-hydrogenase III component G [Energy production and conversion];
Pssm-ID: 442493 [Multi-domain] Cd Length: 523 Bit Score: 131.23 E-value: 1.87e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 22 ELHNRFGAEAFTAQPTVTGMPVLWVQRARLIEILTFLRQMPKPYVMLydLHGVDERLRtkrrglpDADFTVFYHLMSIER 101
Cdd:COG3262 6 ELRARFGGSILERRWVRPNEVWVEVDREDLPELAEFLAEGGGGRLAA--LWGNDEREL-------GGGFAVYYVFALEGE 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 102 NSDVMIKVALSESDLSMPTITGIWPNANWYEREVWDMFGIDFPGHPHLTRIMMPPTW-EG-HPLRKDFPARATEFdpysl 179
Cdd:COG3262 77 GALVTLKVSVPKDDPVFPSITDLFPAASWYEREIRDLFGIVPEGHPDPRRLVLHDDWpEGiYPLRKDFKGGPRPA----- 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 180 tlakqqLEEEAARFRPEdwgmkrsgTNEDYMFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMAERQSW 259
Cdd:COG3262 152 ------PAPAEEYFRPV--------EGEGIEVVVVGPVHAGIIEPGHFFFSVGGEIVIRLEELLYYVHKGEEKLEEGEEG 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 260 HSYIPYTDRIDYLGGVMNNLPYVLSVEKLAGITVPDRVNVIRIMMSEFFRITSHLLFLGTYIQDVGAMTPVFFTFTDRQR 339
Cdd:COG3262 218 RAGLVLAEAAGGDSGAAAAAAAAAAAEAAAAAAIPPRAALLRLLRLLLERLELHLGLLGLGGLDAGGAGAAGAAALLRRR 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 340 AYTVIEAVTGFRLHPAWFRIGGVAHDLPRGWEKLVKDFIDWMPKRLDEYTKAALQNS--ILKGRTVGVAAYNTKEALewG 417
Cdd:COG3262 298 LERLLEALLLRRGRRGGGGGGGGGRDDDDLLADLILELLLDLEEEEEELEELADLLSrlIDRLDTTGGLALKAAAAG--G 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 418 VTGPSLRATGLDFDLRKARPYSGYENFEFEVPLAHDGDAYDRCIVRVEEMRQSLKIIEQCMRNMPAGPYKADHPLTTPPP 497
Cdd:COG3262 376 VGGAAGRASGGRGDRRRRAPYAAYDDVDLRVVVLTVGDVDVRRARVREELEEISRLIIILLDLLLLGPGGLLVGGEPAPA 455
|
..
gi 1598135522 498 KE 499
Cdd:COG3262 456 EG 457
|
|
| PRK07785 |
PRK07785 |
NADH dehydrogenase subunit C; Provisional |
44-168 |
2.01e-30 |
|
NADH dehydrogenase subunit C; Provisional
Pssm-ID: 181115 [Multi-domain] Cd Length: 235 Bit Score: 119.32 E-value: 2.01e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 44 LWVQRARLIEILTFLRQMPK-PYVMLYDLHGVDERLRTKRRglpdadFTVFYHLMSIERNSDVMIKVALSESDLSMPTIT 122
Cdd:PRK07785 93 LHVRREHLVEVAQTLRDDPAlRFELCLGVSGVHYPHDTGRE------LHAVYHLTSITHNRRIRLEVAVPDADPHIPSLV 166
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1598135522 123 GIWPNANWYEREVWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDFP 168
Cdd:PRK07785 167 SVYPTNDWHERETYDFFGIVFDGHPALTRIEMPDDWVGHPQRKDYP 212
|
|
| PRK12494 |
PRK12494 |
NAD(P)H-quinone oxidoreductase subunit J; |
40-167 |
2.33e-26 |
|
NAD(P)H-quinone oxidoreductase subunit J;
Pssm-ID: 183557 [Multi-domain] Cd Length: 172 Bit Score: 105.81 E-value: 2.33e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 40 GMPVLWVQRARLIEILTFLRQMPKPYVML---YDLhGVDERLrtkrrglpdadfTVFYHLMSIERNSD----VMIKVALS 112
Cdd:PRK12494 39 GVEIIKVEPDFLLPIATALYAYGFNYLQCqggYDE-GPGKEL------------VSFYHLIKVSDNADkpreVRLKVFLP 105
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1598135522 113 ESDLSMPTITGIWPNANWYEREVWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDF 167
Cdd:PRK12494 106 RDDPRVPSVYWIWKGADWQERETYDMYGINFEGHPNLKRILMPEDWVGWPLRKDY 160
|
|
| PRK08491 |
PRK08491 |
NADH-quinone oxidoreductase subunit C; |
43-174 |
1.81e-25 |
|
NADH-quinone oxidoreductase subunit C;
Pssm-ID: 181449 Cd Length: 263 Bit Score: 105.91 E-value: 1.81e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 43 VLWVQRARLIEILTFLRQMPkpYVMLYDLHGVDerLRTKRRGlpdadFTVFYHLMSIERNSDVMIKVALSESDlSMPTIT 122
Cdd:PRK08491 60 VIWIKKDDNFKVLKILKHLG--YECLSEMSAID--FLAKKGG-----FEVFYQLLSMSKRKRVRVKCFLKEKE-ALQSVS 129
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1598135522 123 GIWPNANWYEREVWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDFPARATEF 174
Cdd:PRK08491 130 FLFKSANWSEREMYDMFGIVINNHPYLKRILMPDDWVGHPLLKSYPLKGDEF 181
|
|
| PRK07735 |
PRK07735 |
NADH-quinone oxidoreductase subunit C; |
42-167 |
7.46e-25 |
|
NADH-quinone oxidoreductase subunit C;
Pssm-ID: 236081 [Multi-domain] Cd Length: 430 Bit Score: 107.37 E-value: 7.46e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1598135522 42 PVLWVQRARLIEILTFLR---QMPKPYvmLYDLHGVDERLRTKrrglpdadftVFYHLMSIERNSDVMIKVALSESDLSM 118
Cdd:PRK07735 307 PTLVVEPEKYYEVAELLRfheQLAFDY--LSELHGTDFVTHME----------VYVHLYSYGKRQSVAVKVKLDREAPQV 374
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1598135522 119 PTITGIWPNANWYEREVWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDF 167
Cdd:PRK07735 375 ESVTPLWKGANWPEREAYDLLGIVFKGHPNLSRILLPDDWVGHPLRKDY 423
|
|
| ndhJ |
CHL00012 |
NADH dehydrogenase subunit J |
94-167 |
1.79e-20 |
|
NADH dehydrogenase subunit J
Pssm-ID: 176955 [Multi-domain] Cd Length: 158 Bit Score: 88.60 E-value: 1.79e-20
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1598135522 94 YHLMSIERNSD----VMIKVALSESDLSMPTITGIWPNANWYEREVWDMFGIDFPGHPHLTRIMMPPTWEGHPLRKDF 167
Cdd:CHL00012 69 YHLTRIQYGVDqpeeVCIKVFVPRKNPRIPSVFWVWKSADFQERESYDMLGISYDNHPRLKRILMPESWIGWPLRKDY 146
|
|
| |
