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Conserved domains on  [gi|1578842378|ref|WP_130221102|]
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acyl-CoA carboxylase subunit beta [Bradyrhizobium genosp. SA-3]

Protein Classification

acyl-CoA carboxylase subunit beta( domain architecture ID 11469175)

acyl-CoA carboxylase subunit beta, such as propionyl-CoA carboxylase subunit beta, which is the catalytic carboxyltransferase subunit of the enzyme that catalyzes the carboxylation of propionyl-CoA to form methylmalonyl-CoA

CATH:  3.90.226.10
PubMed:  8102604
SCOP:  4000456

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MmdA COG4799
Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];
22-533 0e+00

Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];


:

Pssm-ID: 443827 [Multi-domain]  Cd Length: 508  Bit Score: 701.78  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378  22 HRDLVARFRERQGAARHKRQQRDLERLRRQGKMLPRERIEKLLDPCTpFLELSSLAANMAY--DGDAPSASCITGIGIVS 99
Cdd:COG4799     2 MRALLAELRARREEALLGGGEKAIERQHARGKLTARERIDLLLDPGS-FLELGALAGHRMYddDDRVPGDGVVTGIGTVD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 100 GKEVLIHANDSTIKGGAWYPLTVKKIVRAMDIAIENRLPVIHLCDSAGGFLQLQSELFPdrhMAGRIFRNQTLLSkMGVK 179
Cdd:COG4799    81 GRPVVVVANDFTVKGGSLGPMTAKKILRAQDIALENGLPVIYLVDSGGARLQEGVESFA---GYGRIFYRNARSS-GGIP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 180 QLALVFGHCTAGGAYVPALSDYNVIVRDTGAVFLGGPPLVKAATGEDVTVAELGGAEMHTSVSGTCDYAAEDEEDAIRIG 259
Cdd:COG4799   157 QISVIMGPCAAGGAYSPALSDFVIMVKGTSQMFLGGPPVVKAATGEEVTAEELGGADVHARVSGVADYLAEDEEEALALA 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 260 REIVAQWQVAKKWDCQRDTPEAPAYDPEELYGILPDDIKIQFDMREVIARIVDGSRFHEYQPAYGRTLICGFANIWGFKV 339
Cdd:COG4799   237 RRLLSYLPSNNLEDPPRAEPAPPARDPEELYGIVPEDPRKPYDMREVIARLVDGGSFFEFKPLYGPNIVTGFARIDGRPV 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 340 GILANN-----GVLFNDSSLKGAHFIELCNQNNTPLVFLQNITGYMIGREYERRGITKDGAKMIMAQSCSRVPKFTLMCN 414
Cdd:COG4799   317 GIVANQpmvlaGVLDIDAADKAARFIRLCDAFNIPLVFLVDVPGFMVGTEQERGGIIRHGAKLLYAVAEATVPKITVILR 396
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 415 GSFGAGNYGMCGRAFDARFIFGWPNHQVGVMGGDQAANTLVEVKLNQMKSRgetinqeeiERVRSETLRAYQQQLSGYYA 494
Cdd:COG4799   397 KAYGAGYYAMCGKALGPDFLFAWPTAEIAVMGGEGAANVLYRRELAAAEDP---------EALRAELIAEYEEQANPYYA 467
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|.
gi 1578842378 495 TSELWDDGMIDPVDTRNALGIAISASLNAPLGDAG--YGVF 533
Cdd:COG4799   468 AARGWIDDVIDPRDTRRVLARALEAAANKPEERPPkkHGVI 508
 
Name Accession Description Interval E-value
MmdA COG4799
Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];
22-533 0e+00

Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];


Pssm-ID: 443827 [Multi-domain]  Cd Length: 508  Bit Score: 701.78  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378  22 HRDLVARFRERQGAARHKRQQRDLERLRRQGKMLPRERIEKLLDPCTpFLELSSLAANMAY--DGDAPSASCITGIGIVS 99
Cdd:COG4799     2 MRALLAELRARREEALLGGGEKAIERQHARGKLTARERIDLLLDPGS-FLELGALAGHRMYddDDRVPGDGVVTGIGTVD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 100 GKEVLIHANDSTIKGGAWYPLTVKKIVRAMDIAIENRLPVIHLCDSAGGFLQLQSELFPdrhMAGRIFRNQTLLSkMGVK 179
Cdd:COG4799    81 GRPVVVVANDFTVKGGSLGPMTAKKILRAQDIALENGLPVIYLVDSGGARLQEGVESFA---GYGRIFYRNARSS-GGIP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 180 QLALVFGHCTAGGAYVPALSDYNVIVRDTGAVFLGGPPLVKAATGEDVTVAELGGAEMHTSVSGTCDYAAEDEEDAIRIG 259
Cdd:COG4799   157 QISVIMGPCAAGGAYSPALSDFVIMVKGTSQMFLGGPPVVKAATGEEVTAEELGGADVHARVSGVADYLAEDEEEALALA 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 260 REIVAQWQVAKKWDCQRDTPEAPAYDPEELYGILPDDIKIQFDMREVIARIVDGSRFHEYQPAYGRTLICGFANIWGFKV 339
Cdd:COG4799   237 RRLLSYLPSNNLEDPPRAEPAPPARDPEELYGIVPEDPRKPYDMREVIARLVDGGSFFEFKPLYGPNIVTGFARIDGRPV 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 340 GILANN-----GVLFNDSSLKGAHFIELCNQNNTPLVFLQNITGYMIGREYERRGITKDGAKMIMAQSCSRVPKFTLMCN 414
Cdd:COG4799   317 GIVANQpmvlaGVLDIDAADKAARFIRLCDAFNIPLVFLVDVPGFMVGTEQERGGIIRHGAKLLYAVAEATVPKITVILR 396
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 415 GSFGAGNYGMCGRAFDARFIFGWPNHQVGVMGGDQAANTLVEVKLNQMKSRgetinqeeiERVRSETLRAYQQQLSGYYA 494
Cdd:COG4799   397 KAYGAGYYAMCGKALGPDFLFAWPTAEIAVMGGEGAANVLYRRELAAAEDP---------EALRAELIAEYEEQANPYYA 467
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|.
gi 1578842378 495 TSELWDDGMIDPVDTRNALGIAISASLNAPLGDAG--YGVF 533
Cdd:COG4799   468 AARGWIDDVIDPRDTRRVLARALEAAANKPEERPPkkHGVI 508
PLN02820 PLN02820
3-methylcrotonyl-CoA carboxylase, beta chain
10-535 0e+00

3-methylcrotonyl-CoA carboxylase, beta chain


Pssm-ID: 178415 [Multi-domain]  Cd Length: 569  Bit Score: 676.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378  10 TSSTEFRRREAYHRDLVARFRERQGAARHKRQQRDLERLRRQGKMLPRERIEKLLDPCTPFLELSSLAANMAYDGDAPSA 89
Cdd:PLN02820   38 RNSDAFSANSKAMEGLLSELRSHVAKVRAGGGPEAVKRHRSRNKLLPRERIDRLLDPGSPFLELSQLAGHELYGEDLPSG 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378  90 SCITGIGIVSGKEVLIHANDSTIKGGAWYPLTVKKIVRAMDIAIENRLPVIHLCDSAGGFLQLQSELFPDRHMAGRIFRN 169
Cdd:PLN02820  118 GIVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCRLPCIYLVDSGGANLPRQAEVFPDRDHFGRIFYN 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 170 QTLLSKMGVKQLALVFGHCTAGGAYVPALSDYNVIVRDTGAVFLGGPPLVKAATGEDVTVAELGGAEMHTSVSGTCDYAA 249
Cdd:PLN02820  198 QARMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFLAGPPLVKAATGEEVSAEDLGGADVHCKVSGVSDHFA 277
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 250 EDEEDAIRIGREIVAQWQVAKKWDCQRDTPEA------PAYDPEELYGILPDDIKIQFDMREVIARIVDGSRFHEYQPAY 323
Cdd:PLN02820  278 QDELHALAIGRNIVKNLHLAAKQGMENTLGSKnpeykePLYDVKELRGIVPADHKQSFDVRSVIARIVDGSEFDEFKKNY 357
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 324 GRTLICGFANIWGFKVGILANNGVLFNDSSLKGAHFIELCNQNNTPLVFLQNITGYMIGREYERRGITKDGAKMIMAQSC 403
Cdd:PLN02820  358 GTTLVTGFARIYGQPVGIIGNNGILFTESALKGAHFIELCAQRGIPLLFLQNITGFMVGSRSEASGIAKAGAKMVMAVAC 437
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 404 SRVPKFTLMCNGSFGAGNYGMCGRAFDARFIFGWPNHQVGVMGGDQAANTLVEVKLNQMKSRGETINQEEIERVRSETLR 483
Cdd:PLN02820  438 AKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPNARIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKTVE 517
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1578842378 484 AYQQQLSGYYATSELWDDGMIDPVDTRNALGIAISASLNAPLGDAGYGVFRL 535
Cdd:PLN02820  518 AYEREANPYYSTARLWDDGVIDPADTRRVLGLCLSAALNRSPEDTKFGVFRM 569
Carboxyl_trans pfam01039
Carboxyl transferase domain; All of the members in this family are biotin dependent ...
49-524 1.31e-155

Carboxyl transferase domain; All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.


Pssm-ID: 426008 [Multi-domain]  Cd Length: 491  Bit Score: 453.25  E-value: 1.31e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378  49 RRQGKMLPRERIEKLLDPCTpFLELSSLAANMAYD---GDAPSASCITGIGIVSGKEVLIHANDSTIKGGAWYPLTVKKI 125
Cdd:pfam01039   3 HPRGKLTARERIDLLLDPGS-FGELEDLFFHRATEfgrKRIPRDGVVTGSGAVIGRAVEVVAQDFTVFGGSLGPAKGEKI 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 126 VRAMDIAIENRLPVIHLCDSAGGFLQlqsELFPDRHMAGRIFRNQTLLSKmGVKQLALVFGHCTAGGAYVPALSDYNVIV 205
Cdd:pfam01039  82 LRAMEIAIKTGLPLIGINDSGGARIQ---EGVENLRGSGKIFGRNSLASG-VIPQISLIMGPCAGGGAYLPALGDFVIMV 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 206 RDTGAVFLGGPPLVKAATGEDVTVAELGGAEMHTSVSGTCDYAAEDEEDAIRIGREIVAqWQVAKKWDCQRDTPEAPAYD 285
Cdd:pfam01039 158 EGTSPMFLTGPPVIKKVTGEEVTSEELGGATQHMTISGVSHLTALDDEDALELIRKWLS-YLPKPAPNNREPVPIVPTKD 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 286 P----EELYGILPDDIKIQFDMREVIARIVDGSRFHEYQPAYGRTLICGFANIWGFKVGILANN-----GVLFNDSSLKG 356
Cdd:pfam01039 237 PpdrdAPLVSIVPDDPKKPYDVREVIAGIVDEGEFFEIKPGYAKTVVTGFARLGGIPVGVVANQprvgaGVLFPDSADKA 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 357 AHFIELCNQNNTPLVFLQNITGYMIGREYERRGITKDGAKMIMAQSCSRVPKFTLMCNGSFGAGNYGMCGRAFDARFIFG 436
Cdd:pfam01039 317 ARFIRDCDAFNLPLVILADVPGFLPGQRQEYGGILKHGAKLLYALAEATVPKITVIPRKAYGGAYVVMDSKINGADINFA 396
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 437 WPNHQVGVMGGDQAANTLVEVKLNQMKSRGetinqEEIERVRSETLRAYQQQLSG-YYATSELWDDGMIDPVDTRNALGI 515
Cdd:pfam01039 397 WPTARIAVMGPEGAVEIKFRKEKAAAEMRG-----KDLAATRKQKIAEYEEELSPpYVAAARGFADAVIDPGRTRAKLVI 471

                  ....*....
gi 1578842378 516 AISASLNAP 524
Cdd:pfam01039 472 ALAALWTKP 480
 
Name Accession Description Interval E-value
MmdA COG4799
Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];
22-533 0e+00

Acetyl-CoA carboxylase, carboxyltransferase component [Lipid transport and metabolism];


Pssm-ID: 443827 [Multi-domain]  Cd Length: 508  Bit Score: 701.78  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378  22 HRDLVARFRERQGAARHKRQQRDLERLRRQGKMLPRERIEKLLDPCTpFLELSSLAANMAY--DGDAPSASCITGIGIVS 99
Cdd:COG4799     2 MRALLAELRARREEALLGGGEKAIERQHARGKLTARERIDLLLDPGS-FLELGALAGHRMYddDDRVPGDGVVTGIGTVD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 100 GKEVLIHANDSTIKGGAWYPLTVKKIVRAMDIAIENRLPVIHLCDSAGGFLQLQSELFPdrhMAGRIFRNQTLLSkMGVK 179
Cdd:COG4799    81 GRPVVVVANDFTVKGGSLGPMTAKKILRAQDIALENGLPVIYLVDSGGARLQEGVESFA---GYGRIFYRNARSS-GGIP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 180 QLALVFGHCTAGGAYVPALSDYNVIVRDTGAVFLGGPPLVKAATGEDVTVAELGGAEMHTSVSGTCDYAAEDEEDAIRIG 259
Cdd:COG4799   157 QISVIMGPCAAGGAYSPALSDFVIMVKGTSQMFLGGPPVVKAATGEEVTAEELGGADVHARVSGVADYLAEDEEEALALA 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 260 REIVAQWQVAKKWDCQRDTPEAPAYDPEELYGILPDDIKIQFDMREVIARIVDGSRFHEYQPAYGRTLICGFANIWGFKV 339
Cdd:COG4799   237 RRLLSYLPSNNLEDPPRAEPAPPARDPEELYGIVPEDPRKPYDMREVIARLVDGGSFFEFKPLYGPNIVTGFARIDGRPV 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 340 GILANN-----GVLFNDSSLKGAHFIELCNQNNTPLVFLQNITGYMIGREYERRGITKDGAKMIMAQSCSRVPKFTLMCN 414
Cdd:COG4799   317 GIVANQpmvlaGVLDIDAADKAARFIRLCDAFNIPLVFLVDVPGFMVGTEQERGGIIRHGAKLLYAVAEATVPKITVILR 396
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 415 GSFGAGNYGMCGRAFDARFIFGWPNHQVGVMGGDQAANTLVEVKLNQMKSRgetinqeeiERVRSETLRAYQQQLSGYYA 494
Cdd:COG4799   397 KAYGAGYYAMCGKALGPDFLFAWPTAEIAVMGGEGAANVLYRRELAAAEDP---------EALRAELIAEYEEQANPYYA 467
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|.
gi 1578842378 495 TSELWDDGMIDPVDTRNALGIAISASLNAPLGDAG--YGVF 533
Cdd:COG4799   468 AARGWIDDVIDPRDTRRVLARALEAAANKPEERPPkkHGVI 508
PLN02820 PLN02820
3-methylcrotonyl-CoA carboxylase, beta chain
10-535 0e+00

3-methylcrotonyl-CoA carboxylase, beta chain


Pssm-ID: 178415 [Multi-domain]  Cd Length: 569  Bit Score: 676.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378  10 TSSTEFRRREAYHRDLVARFRERQGAARHKRQQRDLERLRRQGKMLPRERIEKLLDPCTPFLELSSLAANMAYDGDAPSA 89
Cdd:PLN02820   38 RNSDAFSANSKAMEGLLSELRSHVAKVRAGGGPEAVKRHRSRNKLLPRERIDRLLDPGSPFLELSQLAGHELYGEDLPSG 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378  90 SCITGIGIVSGKEVLIHANDSTIKGGAWYPLTVKKIVRAMDIAIENRLPVIHLCDSAGGFLQLQSELFPDRHMAGRIFRN 169
Cdd:PLN02820  118 GIVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCRLPCIYLVDSGGANLPRQAEVFPDRDHFGRIFYN 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 170 QTLLSKMGVKQLALVFGHCTAGGAYVPALSDYNVIVRDTGAVFLGGPPLVKAATGEDVTVAELGGAEMHTSVSGTCDYAA 249
Cdd:PLN02820  198 QARMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFLAGPPLVKAATGEEVSAEDLGGADVHCKVSGVSDHFA 277
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 250 EDEEDAIRIGREIVAQWQVAKKWDCQRDTPEA------PAYDPEELYGILPDDIKIQFDMREVIARIVDGSRFHEYQPAY 323
Cdd:PLN02820  278 QDELHALAIGRNIVKNLHLAAKQGMENTLGSKnpeykePLYDVKELRGIVPADHKQSFDVRSVIARIVDGSEFDEFKKNY 357
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 324 GRTLICGFANIWGFKVGILANNGVLFNDSSLKGAHFIELCNQNNTPLVFLQNITGYMIGREYERRGITKDGAKMIMAQSC 403
Cdd:PLN02820  358 GTTLVTGFARIYGQPVGIIGNNGILFTESALKGAHFIELCAQRGIPLLFLQNITGFMVGSRSEASGIAKAGAKMVMAVAC 437
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 404 SRVPKFTLMCNGSFGAGNYGMCGRAFDARFIFGWPNHQVGVMGGDQAANTLVEVKLNQMKSRGETINQEEIERVRSETLR 483
Cdd:PLN02820  438 AKVPKITIIVGGSFGAGNYGMCGRAYSPNFLFMWPNARIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKTVE 517
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1578842378 484 AYQQQLSGYYATSELWDDGMIDPVDTRNALGIAISASLNAPLGDAGYGVFRL 535
Cdd:PLN02820  518 AYEREANPYYSTARLWDDGVIDPADTRRVLGLCLSAALNRSPEDTKFGVFRM 569
Carboxyl_trans pfam01039
Carboxyl transferase domain; All of the members in this family are biotin dependent ...
49-524 1.31e-155

Carboxyl transferase domain; All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.


Pssm-ID: 426008 [Multi-domain]  Cd Length: 491  Bit Score: 453.25  E-value: 1.31e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378  49 RRQGKMLPRERIEKLLDPCTpFLELSSLAANMAYD---GDAPSASCITGIGIVSGKEVLIHANDSTIKGGAWYPLTVKKI 125
Cdd:pfam01039   3 HPRGKLTARERIDLLLDPGS-FGELEDLFFHRATEfgrKRIPRDGVVTGSGAVIGRAVEVVAQDFTVFGGSLGPAKGEKI 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 126 VRAMDIAIENRLPVIHLCDSAGGFLQlqsELFPDRHMAGRIFRNQTLLSKmGVKQLALVFGHCTAGGAYVPALSDYNVIV 205
Cdd:pfam01039  82 LRAMEIAIKTGLPLIGINDSGGARIQ---EGVENLRGSGKIFGRNSLASG-VIPQISLIMGPCAGGGAYLPALGDFVIMV 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 206 RDTGAVFLGGPPLVKAATGEDVTVAELGGAEMHTSVSGTCDYAAEDEEDAIRIGREIVAqWQVAKKWDCQRDTPEAPAYD 285
Cdd:pfam01039 158 EGTSPMFLTGPPVIKKVTGEEVTSEELGGATQHMTISGVSHLTALDDEDALELIRKWLS-YLPKPAPNNREPVPIVPTKD 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 286 P----EELYGILPDDIKIQFDMREVIARIVDGSRFHEYQPAYGRTLICGFANIWGFKVGILANN-----GVLFNDSSLKG 356
Cdd:pfam01039 237 PpdrdAPLVSIVPDDPKKPYDVREVIAGIVDEGEFFEIKPGYAKTVVTGFARLGGIPVGVVANQprvgaGVLFPDSADKA 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 357 AHFIELCNQNNTPLVFLQNITGYMIGREYERRGITKDGAKMIMAQSCSRVPKFTLMCNGSFGAGNYGMCGRAFDARFIFG 436
Cdd:pfam01039 317 ARFIRDCDAFNLPLVILADVPGFLPGQRQEYGGILKHGAKLLYALAEATVPKITVIPRKAYGGAYVVMDSKINGADINFA 396
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578842378 437 WPNHQVGVMGGDQAANTLVEVKLNQMKSRGetinqEEIERVRSETLRAYQQQLSG-YYATSELWDDGMIDPVDTRNALGI 515
Cdd:pfam01039 397 WPTARIAVMGPEGAVEIKFRKEKAAAEMRG-----KDLAATRKQKIAEYEEELSPpYVAAARGFADAVIDPGRTRAKLVI 471

                  ....*....
gi 1578842378 516 AISASLNAP 524
Cdd:pfam01039 472 ALAALWTKP 480
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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