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Conserved domains on  [gi|1578827864|ref|WP_130207020|]
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MULTISPECIES: YehR family lipoprotein [Escherichia]

Protein Classification

YehR family lipoprotein( domain architecture ID 10008849)

YehR family lipoprotein is a DUF1307 domain-containing protein; similar to Escherichia coli lipoprotein YehR

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
YehR COG4808
Uncharacterized lipoprotein YehR, DUF1307 family [Function unknown];
1-153 2.06e-61

Uncharacterized lipoprotein YehR, DUF1307 family [Function unknown];


:

Pssm-ID: 443836  Cd Length: 152  Bit Score: 185.96  E-value: 2.06e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578827864   1 MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVIKQSSETKIQFATIGATTKEDAAKKLEP 80
Cdd:COG4808     1 MKMMKKLLLLLAALVLVFILTGCGSKEETKTYEANENGVEVTLTYTYKGDKVLKQTAENKIPYASLGAKNKEEAKKLLDP 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1578827864  81 LSAKYKNIPGVEEKLTYTDTYAQENVNIDMEKVDLKALQGISGIkMGDEDTSKGVSMKQIELVMAAAGFKEVK 153
Cdd:COG4808    81 ISEKYQGIKGVKESIDYKDEYAIETVDVDYTKADIKKLKKLPGS-MFSGDSKKGISMKKSEKLLEEQGFKEVK 152
 
Name Accession Description Interval E-value
YehR COG4808
Uncharacterized lipoprotein YehR, DUF1307 family [Function unknown];
1-153 2.06e-61

Uncharacterized lipoprotein YehR, DUF1307 family [Function unknown];


Pssm-ID: 443836  Cd Length: 152  Bit Score: 185.96  E-value: 2.06e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578827864   1 MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVIKQSSETKIQFATIGATTKEDAAKKLEP 80
Cdd:COG4808     1 MKMMKKLLLLLAALVLVFILTGCGSKEETKTYEANENGVEVTLTYTYKGDKVLKQTAENKIPYASLGAKNKEEAKKLLDP 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1578827864  81 LSAKYKNIPGVEEKLTYTDTYAQENVNIDMEKVDLKALQGISGIkMGDEDTSKGVSMKQIELVMAAAGFKEVK 153
Cdd:COG4808    81 ISEKYQGIKGVKESIDYKDEYAIETVDVDYTKADIKKLKKLPGS-MFSGDSKKGISMKKSEKLLEEQGFKEVK 152
DUF1307 pfam06998
Protein of unknown function (DUF1307); This family consists of several hypothetical bacterial ...
36-149 7.76e-42

Protein of unknown function (DUF1307); This family consists of several hypothetical bacterial proteins of around 150 residues in length. Some family members are described as putative lipoproteins but the function of the family is unknown.


Pssm-ID: 429238 [Multi-domain]  Cd Length: 114  Bit Score: 135.16  E-value: 7.76e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578827864  36 LNGTEIAITYVYKGDKVIKQSSETKIQFATIGATTKEDAAKKLEPLSAKYKNIPGVEEKLTYTDTYAQENVNIDMEKVDL 115
Cdd:pfam06998   1 QNGIDIKLTYTYKGDKVLKQTAENKIPYSALGVETKEEAKKLLDPLSEKYQGIKGVTEKLDYKDDKAIEKVDIDYTKADK 80
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1578827864 116 KALQGISGIKMGDEDTSKGVSMKQIELVMAAAGF 149
Cdd:pfam06998  81 DDLKKLLGISTDGEDTSKGISMKKTEKQLEAQGY 114
 
Name Accession Description Interval E-value
YehR COG4808
Uncharacterized lipoprotein YehR, DUF1307 family [Function unknown];
1-153 2.06e-61

Uncharacterized lipoprotein YehR, DUF1307 family [Function unknown];


Pssm-ID: 443836  Cd Length: 152  Bit Score: 185.96  E-value: 2.06e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578827864   1 MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVIKQSSETKIQFATIGATTKEDAAKKLEP 80
Cdd:COG4808     1 MKMMKKLLLLLAALVLVFILTGCGSKEETKTYEANENGVEVTLTYTYKGDKVLKQTAENKIPYASLGAKNKEEAKKLLDP 80
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1578827864  81 LSAKYKNIPGVEEKLTYTDTYAQENVNIDMEKVDLKALQGISGIkMGDEDTSKGVSMKQIELVMAAAGFKEVK 153
Cdd:COG4808    81 ISEKYQGIKGVKESIDYKDEYAIETVDVDYTKADIKKLKKLPGS-MFSGDSKKGISMKKSEKLLEEQGFKEVK 152
DUF1307 pfam06998
Protein of unknown function (DUF1307); This family consists of several hypothetical bacterial ...
36-149 7.76e-42

Protein of unknown function (DUF1307); This family consists of several hypothetical bacterial proteins of around 150 residues in length. Some family members are described as putative lipoproteins but the function of the family is unknown.


Pssm-ID: 429238 [Multi-domain]  Cd Length: 114  Bit Score: 135.16  E-value: 7.76e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1578827864  36 LNGTEIAITYVYKGDKVIKQSSETKIQFATIGATTKEDAAKKLEPLSAKYKNIPGVEEKLTYTDTYAQENVNIDMEKVDL 115
Cdd:pfam06998   1 QNGIDIKLTYTYKGDKVLKQTAENKIPYSALGVETKEEAKKLLDPLSEKYQGIKGVTEKLDYKDDKAIEKVDIDYTKADK 80
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1578827864 116 KALQGISGIKMGDEDTSKGVSMKQIELVMAAAGF 149
Cdd:pfam06998  81 DDLKKLLGISTDGEDTSKGISMKKTEKQLEAQGY 114
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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