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Conserved domains on  [gi|1481165164|ref|WP_119680297|]
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phosphatidylcholine/phosphatidylserine synthase [Indioceanicola profundi]

Protein Classification

CDP-alcohol phosphatidyltransferase family protein( domain architecture ID 11439579)

CDP-alcohol phosphatidyltransferase family protein similar to phosphatidylcholine/phosphatidylserine synthase, which catalyzes the condensation of CDP-diacylglycerol with choline or L-serine to form phosphatidylcholine or (3-sn-phosphatidyl)-L-serine, respectively

Gene Ontology:  GO:0016780|GO:0008654

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PssA COG1183
Phosphatidylserine synthase [Lipid transport and metabolism];
13-228 2.02e-33

Phosphatidylserine synthase [Lipid transport and metabolism];


:

Pssm-ID: 440796 [Multi-domain]  Cd Length: 237  Bit Score: 120.30  E-value: 2.02e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481165164  13 WAVHLLTATGAIWALLALIAVIEGDARLCFFWLGVALIVDGIDGPLARWAHVKTRvkqfDGAALDLIVDYLTYVFVPVMF 92
Cdd:COG1183    11 LLPNLFTLLNLFCGFLAIVAAIEGDFELAALLILLAAVFDGLDGRVARLLNVQSE----FGAELDSLADMVSFGVAPALL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481165164  93 VWQFDMLP-QNLELLGCSLILLSSLHLFAKLDMKSDD--NHFVGFPGIWNVAVLYFFIL---------ETASWTNAALVV 160
Cdd:COG1183    87 LYQWGLLPlGGLGWLAAFLFAACSALRLARFNVKTDDdkNYFVGLPSPAAALLVASLVLlglelglpgLPNPWVLLALTL 166

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1481165164 161 VLIVLTFVPAKFVHPFRVERLRRVTIPMSVIWIVAVVALVYAHQESPAWAWSLLGLSSLWFAGISLWR 228
Cdd:COG1183   167 LLALLMVSPIPYPSFKRLSLKRRVPLPLLLLVVLAVALLVLYPWLALFLLFLLYLLSGPVLALYRLRR 234
 
Name Accession Description Interval E-value
PssA COG1183
Phosphatidylserine synthase [Lipid transport and metabolism];
13-228 2.02e-33

Phosphatidylserine synthase [Lipid transport and metabolism];


Pssm-ID: 440796 [Multi-domain]  Cd Length: 237  Bit Score: 120.30  E-value: 2.02e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481165164  13 WAVHLLTATGAIWALLALIAVIEGDARLCFFWLGVALIVDGIDGPLARWAHVKTRvkqfDGAALDLIVDYLTYVFVPVMF 92
Cdd:COG1183    11 LLPNLFTLLNLFCGFLAIVAAIEGDFELAALLILLAAVFDGLDGRVARLLNVQSE----FGAELDSLADMVSFGVAPALL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481165164  93 VWQFDMLP-QNLELLGCSLILLSSLHLFAKLDMKSDD--NHFVGFPGIWNVAVLYFFIL---------ETASWTNAALVV 160
Cdd:COG1183    87 LYQWGLLPlGGLGWLAAFLFAACSALRLARFNVKTDDdkNYFVGLPSPAAALLVASLVLlglelglpgLPNPWVLLALTL 166

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1481165164 161 VLIVLTFVPAKFVHPFRVERLRRVTIPMSVIWIVAVVALVYAHQESPAWAWSLLGLSSLWFAGISLWR 228
Cdd:COG1183   167 LLALLMVSPIPYPSFKRLSLKRRVPLPLLLLVVLAVALLVLYPWLALFLLFLLYLLSGPVLALYRLRR 234
 
Name Accession Description Interval E-value
PssA COG1183
Phosphatidylserine synthase [Lipid transport and metabolism];
13-228 2.02e-33

Phosphatidylserine synthase [Lipid transport and metabolism];


Pssm-ID: 440796 [Multi-domain]  Cd Length: 237  Bit Score: 120.30  E-value: 2.02e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481165164  13 WAVHLLTATGAIWALLALIAVIEGDARLCFFWLGVALIVDGIDGPLARWAHVKTRvkqfDGAALDLIVDYLTYVFVPVMF 92
Cdd:COG1183    11 LLPNLFTLLNLFCGFLAIVAAIEGDFELAALLILLAAVFDGLDGRVARLLNVQSE----FGAELDSLADMVSFGVAPALL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1481165164  93 VWQFDMLP-QNLELLGCSLILLSSLHLFAKLDMKSDD--NHFVGFPGIWNVAVLYFFIL---------ETASWTNAALVV 160
Cdd:COG1183    87 LYQWGLLPlGGLGWLAAFLFAACSALRLARFNVKTDDdkNYFVGLPSPAAALLVASLVLlglelglpgLPNPWVLLALTL 166

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1481165164 161 VLIVLTFVPAKFVHPFRVERLRRVTIPMSVIWIVAVVALVYAHQESPAWAWSLLGLSSLWFAGISLWR 228
Cdd:COG1183   167 LLALLMVSPIPYPSFKRLSLKRRVPLPLLLLVVLAVALLVLYPWLALFLLFLLYLLSGPVLALYRLRR 234
PgsA COG0558
Phosphatidylglycerophosphate synthase [Lipid transport and metabolism]; ...
 17-94 4.93e-03

Phosphatidylglycerophosphate synthase [Lipid transport and metabolism]; Phosphatidylglycerophosphate synthase is part of the Pathway/BioSystem: Phospholipid biosynthesis


Pssm-ID: 440324 [Multi-domain]  Cd Length: 177  Bit Score: 36.76  E-value: 4.93e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1481165164  17 LLTATGAIWALLALIAVIEGDAR-LCFFWLGVALIVDGIDGPLARWAHVKTRVkqfdGAALDLIVDYLTYVFVPVMFVW 94
Cdd:COG0558    14 QLTLLRILLVPVFALLLLLGGALlLALVLFLLAGLTDALDGYLARRLGQVSRF----GAFLDPVADKLLDAAALLGLVL 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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