MFS transporter, partial [Shigella boydii]
List of domain hits
Name | Accession | Description | Interval | E-value | |||
PRK10406 super family | cl32511 | alpha-ketoglutarate transporter; Provisional |
19-146 | 2.68e-78 | |||
alpha-ketoglutarate transporter; Provisional The actual alignment was detected with superfamily member PRK10406: Pssm-ID: 182433 [Multi-domain] Cd Length: 432 Bit Score: 238.17 E-value: 2.68e-78
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Name | Accession | Description | Interval | E-value | |||
PRK10406 | PRK10406 | alpha-ketoglutarate transporter; Provisional |
19-146 | 2.68e-78 | |||
alpha-ketoglutarate transporter; Provisional Pssm-ID: 182433 [Multi-domain] Cd Length: 432 Bit Score: 238.17 E-value: 2.68e-78
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MFS_KgtP | cd17367 | Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This ... |
20-141 | 1.41e-48 | |||
Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Pssm-ID: 340925 [Multi-domain] Cd Length: 407 Bit Score: 160.54 E-value: 1.41e-48
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UhpC | COG2271 | Sugar phosphate permease [Carbohydrate transport and metabolism]; |
20-142 | 1.54e-03 | |||
Sugar phosphate permease [Carbohydrate transport and metabolism]; Pssm-ID: 441872 [Multi-domain] Cd Length: 363 Bit Score: 37.54 E-value: 1.54e-03
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Name | Accession | Description | Interval | E-value | |||
PRK10406 | PRK10406 | alpha-ketoglutarate transporter; Provisional |
19-146 | 2.68e-78 | |||
alpha-ketoglutarate transporter; Provisional Pssm-ID: 182433 [Multi-domain] Cd Length: 432 Bit Score: 238.17 E-value: 2.68e-78
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MFS_KgtP | cd17367 | Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This ... |
20-141 | 1.41e-48 | |||
Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters; This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Pssm-ID: 340925 [Multi-domain] Cd Length: 407 Bit Score: 160.54 E-value: 1.41e-48
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MFS_SV2_like | cd17316 | Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ... |
20-135 | 1.07e-13 | |||
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Pssm-ID: 340874 [Multi-domain] Cd Length: 353 Bit Score: 66.47 E-value: 1.07e-13
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MFS_ShiA_like | cd17369 | Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ... |
20-135 | 8.41e-13 | |||
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Pssm-ID: 340927 [Multi-domain] Cd Length: 408 Bit Score: 64.09 E-value: 8.41e-13
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MFS_CitA | cd17368 | Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton ... |
20-141 | 1.59e-07 | |||
Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton symporter, also called citrate carrier protein or citrate transporter or citrate utilization protein A (CitA), is a proton symporter that functions in the uptake of citrate across the boundary membrane. It allows the utilization of citrate as a sole source of carbon and energy. In Klebsiella pneumoniae, the gene encoding this protein is called citH, instead of citA, which is the case for Escherichia coli and other organisms. CitA belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Pssm-ID: 340926 [Multi-domain] Cd Length: 407 Bit Score: 48.91 E-value: 1.59e-07
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PRK15075 | PRK15075 | tricarballylate/proton symporter TcuC; |
20-145 | 4.18e-07 | |||
tricarballylate/proton symporter TcuC; Pssm-ID: 237902 [Multi-domain] Cd Length: 434 Bit Score: 47.63 E-value: 4.18e-07
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MFS_ProP | cd17366 | Proline/betaine transporter of the Major Facilitator Superfamily of transporters; This ... |
20-138 | 6.14e-06 | |||
Proline/betaine transporter of the Major Facilitator Superfamily of transporters; This subfamily is composed of Escherichia coli proline/betaine transporter, also called proline porter II (PPII), and similar proteins. ProP is a proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in the bacterial osmoregulatory response. The ProP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Pssm-ID: 340924 [Multi-domain] Cd Length: 377 Bit Score: 44.27 E-value: 6.14e-06
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UhpC | COG2271 | Sugar phosphate permease [Carbohydrate transport and metabolism]; |
20-142 | 1.54e-03 | |||
Sugar phosphate permease [Carbohydrate transport and metabolism]; Pssm-ID: 441872 [Multi-domain] Cd Length: 363 Bit Score: 37.54 E-value: 1.54e-03
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NarK | COG2223 | Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism]; |
20-143 | 5.00e-03 | |||
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism]; Pssm-ID: 441825 [Multi-domain] Cd Length: 392 Bit Score: 36.01 E-value: 5.00e-03
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Blast search parameters | ||||
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