|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11109 |
PRK11109 |
fused PTS fructose transporter subunit IIA/HPr protein; |
1-364 |
0e+00 |
|
fused PTS fructose transporter subunit IIA/HPr protein;
Pssm-ID: 236849 [Multi-domain] Cd Length: 375 Bit Score: 517.96 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 1 MLKLARQQILLGQSVATKAEAIALLAGKLTEAGLVEAGYVEGMLAREAQHATYLGSGIAIPHGTTDTRHLVKSTGVMVAQ 80
Cdd:PRK11109 1 MFQLSVQDIHLGQQAGNKEEAIRQVAAALTQAGNVAEGYVDGMLAREQQTSTFLGNGIAIPHGTTDTRDLVLKTGVQVFQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 81 FPNGIEWDEGQIAYVAIGIAAKSDEHLGILRQLTHVLGDEQAAAQLKEATDADTIINILTGATAPKEVQF---LALADFP 157
Cdd:PRK11109 81 FPQGVTWGDGQTAYVAIGIAAKSDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKFdtsLITLDVP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 158 ADDRDQLLLGAAARAKSAGWGDAAMVSALLASEPAYLGAGIWLARAQAA--QTGWVLATPSTSLNAGEQPVSALLLLCAA 235
Cdd:PRK11109 161 ASDLLTLQALNAGRLKEAGAVDATFVAKVINSKPLNLGQGIWLSDSAEGnlRSAVAVSRAANAFEVDGEPVALLLTVAAA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 236 DSGHLAQLDNLAKLAAAGQLATLAGGEG---LAMLQAGPA---SGLSETFTIINPHGLHARPGAMLVKVAKEYESDIRVA 309
Cdd:PRK11109 241 DDQPLAVLKRLSDLLLAQKADRLLSADAatlLALLTSEDAetdDVLSAEFVIRNEHGLHARPGAMLVNTIKQFNSEITVT 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1468514435 310 NLDGSGEAVSAKSLMKVIGLGVKCGHRLAFRVEGPDAEAALKGIGAAIAAGLGEG 364
Cdd:PRK11109 321 NLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGEDAEQALKAIGEAIAAGLGEG 375
|
|
| MtlA2 |
COG4668 |
Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and ... |
1-142 |
3.36e-68 |
|
Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism];
Pssm-ID: 443705 [Multi-domain] Cd Length: 143 Bit Score: 211.17 E-value: 3.36e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 1 MLKLARQQILLGQSVATKAEAIALLAGKLTEAGLVEAGYVEGMLAREAQHATYLGSGIAIPHGTTDTRHLVKSTGVMVAQ 80
Cdd:COG4668 1 MLILTKENIRLNASAANKEEAIRLAGQLLVEAGYVEPEYIDAMLEREAQVSTYLGNGIAIPHGTNEAKDLVLKTGISVLQ 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1468514435 81 FPNGIEWDEGQIAYVAIGIAAKSDEHLGILRQLTHVLGDEQAAAQLKEATDADTIINILTGA 142
Cdd:COG4668 81 FPDGVDWGDGNTVYLVIGIAAKSDEHLEILRQLARVLSDEENVEKLAKATDAEEILALLTGE 142
|
|
| PTS_IIA_fru |
cd00211 |
PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: ... |
9-139 |
1.41e-38 |
|
PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.
Pssm-ID: 238129 [Multi-domain] Cd Length: 136 Bit Score: 134.23 E-value: 1.41e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 9 ILLGQSVATKAEAIALLAGKLTEAGLVEAGYVEGMLAREAQHATYLGSGIAIPHGTTDTrhlVKSTGVMVAQFPNGIEWD 88
Cdd:cd00211 6 IRLNLKAKSKEEAIEELAQLLVAAGYVEEEYIEALLEREKEGSTGIGNGIAIPHAKSEA---VKKPGIAVLRLKEPVDFG 82
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1468514435 89 --EGQIAYVAIGIAAKS-DEHLGILRQLTHVLGDEQAAAQLKEATDADTIINIL 139
Cdd:cd00211 83 slDGQPVHLIFLLAAPDsNEHLKALSQLARLLSDEEFVEQLLNAQSKEEILALL 136
|
|
| PTS_EIIA_2 |
pfam00359 |
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; |
4-139 |
1.83e-34 |
|
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2;
Pssm-ID: 459780 [Multi-domain] Cd Length: 139 Bit Score: 123.85 E-value: 1.83e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 4 LARQQILLGQSVATKAEAIALLAGKLTEAGLVEAGYVEGMLAREAQHATYLGSGIAIPHGTTDTrhlVKSTGVMVAQFPN 83
Cdd:pfam00359 2 LDKELIFLNLEAKSKEEAIEFLADKLVEAGYVEPAYLEAILEREKEGSTGIGNGIAIPHARSEA---VKKPGIAVLTLKE 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 84 GIEWD--EGQIAYVAIGIAAKSDE--HLGILRQLTHVLGDEQAAAQLKEATDADTIINIL 139
Cdd:pfam00359 79 PVDFGseDGKPVKLIFLLAAPDNEasHLKILSQLARLLQDEEFVEKLLKAKDPEEILEIL 138
|
|
| PTS-HPr_Halo |
NF041319 |
phosphocarrier protein HPr; |
278-350 |
5.50e-18 |
|
phosphocarrier protein HPr;
Pssm-ID: 469216 [Multi-domain] Cd Length: 87 Bit Score: 77.72 E-value: 5.50e-18
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1468514435 278 TFTIINPHGLHARPGAMLVKVAKEYESDIRVANLDGSGEAVSAKSLMKVIGLGVKCGHRLAFRVEGPDAEAAL 350
Cdd:NF041319 4 TVTVVPEAGLHARPASKFVETANEFDAEVTVGRADDDGDLVNAASMLAVTGLGVRHGEDVRLVAEGDDAEAAL 76
|
|
| PTS_HPr_family |
TIGR01003 |
Phosphotransferase System HPr (HPr) Family; The HPr family are bacterial proteins (or domains ... |
275-358 |
1.28e-15 |
|
Phosphotransferase System HPr (HPr) Family; The HPr family are bacterial proteins (or domains of proteins) which function in phosphoryl transfer system (PTS) systems. They include energy-coupling components which catalyze sugar uptake via a group translocation mechanism. The functions of most of these proteins are not known, but they presumably function in PTS-related regulatory capacities. All seed members are stand-alone HPr proteins, although the model also recognizes HPr domains of PTS fusion proteins. This family includes the related NPr protein. [Signal transduction, PTS]
Pssm-ID: 273389 [Multi-domain] Cd Length: 82 Bit Score: 71.14 E-value: 1.28e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 275 LSETFTIINPHGLHARPGAMLVKVAKEYESDIRVANLdgsGEAVSAKSLMKVIGLGVKCGHRLAFRVEGPDAEAALKGIG 354
Cdd:TIGR01003 2 LSKEVTIINKVGLHARPAAILVKLASGFDSEITLTKN---GKEVNAKSIMGIMMLGAGQGTEVTVSADGEDEAEALEALA 78
|
....
gi 1468514435 355 AAIA 358
Cdd:TIGR01003 79 KLFE 82
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11109 |
PRK11109 |
fused PTS fructose transporter subunit IIA/HPr protein; |
1-364 |
0e+00 |
|
fused PTS fructose transporter subunit IIA/HPr protein;
Pssm-ID: 236849 [Multi-domain] Cd Length: 375 Bit Score: 517.96 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 1 MLKLARQQILLGQSVATKAEAIALLAGKLTEAGLVEAGYVEGMLAREAQHATYLGSGIAIPHGTTDTRHLVKSTGVMVAQ 80
Cdd:PRK11109 1 MFQLSVQDIHLGQQAGNKEEAIRQVAAALTQAGNVAEGYVDGMLAREQQTSTFLGNGIAIPHGTTDTRDLVLKTGVQVFQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 81 FPNGIEWDEGQIAYVAIGIAAKSDEHLGILRQLTHVLGDEQAAAQLKEATDADTIINILTGATAPKEVQF---LALADFP 157
Cdd:PRK11109 81 FPQGVTWGDGQTAYVAIGIAAKSDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKFdtsLITLDVP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 158 ADDRDQLLLGAAARAKSAGWGDAAMVSALLASEPAYLGAGIWLARAQAA--QTGWVLATPSTSLNAGEQPVSALLLLCAA 235
Cdd:PRK11109 161 ASDLLTLQALNAGRLKEAGAVDATFVAKVINSKPLNLGQGIWLSDSAEGnlRSAVAVSRAANAFEVDGEPVALLLTVAAA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 236 DSGHLAQLDNLAKLAAAGQLATLAGGEG---LAMLQAGPA---SGLSETFTIINPHGLHARPGAMLVKVAKEYESDIRVA 309
Cdd:PRK11109 241 DDQPLAVLKRLSDLLLAQKADRLLSADAatlLALLTSEDAetdDVLSAEFVIRNEHGLHARPGAMLVNTIKQFNSEITVT 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1468514435 310 NLDGSGEAVSAKSLMKVIGLGVKCGHRLAFRVEGPDAEAALKGIGAAIAAGLGEG 364
Cdd:PRK11109 321 NLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGEDAEQALKAIGEAIAAGLGEG 375
|
|
| PRK13779 |
PRK13779 |
bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; Provisional |
1-364 |
1.17e-91 |
|
bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; Provisional
Pssm-ID: 237502 [Multi-domain] Cd Length: 503 Bit Score: 283.69 E-value: 1.17e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 1 MLKLARQQILLGQSVATKAEAIALLAGKLTEAGLVEAGYVEGMLAREAQHATYLGSGIAIPHGTTDTRHLVKSTGVMVAQ 80
Cdd:PRK13779 1 MLNLSESNIHLNAQAINKQQAIEMAAAALEQAGNVENGYLQGMLARELQTSTFLGNGIAIPHGTLDTRHMVKNTGVQIFQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 81 FPNGIEWDEGQIAYVAIGIAAKSDEHLGILRQLTHVLGDEQAAAQLKEATDADTIINILTGATAPKEVQfLALADFPADD 160
Cdd:PRK13779 81 FPQGIEWGEGNIAYVVIGIAARSDEHLSLLRQLTHVLSDEDTAAKLATLTDVKEFRAILMGETEPFSVP-AANISLDVDT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 161 RDQLLLGA--AARAKSAGWGDAAMVSALLASEPAYLGAGIWLARAQAA--QTGWVLATPSTSLNAGEQPVSALLLLCAAD 236
Cdd:PRK13779 160 QSLLTLVAinAGKLQEQSAVENRFISEVISNPALPLGKGLWVTDSAVGnqKNALAFSRAKTIFSHNGKAVQGVITVSAVD 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 237 SGHLAQLDNLAKLAAAGQLATLAGGEGLAMLQAGPASGLSE-------------TFTIINPHGLHARPGAMLVKVAKEYE 303
Cdd:PRK13779 240 DQINPTLARLLDDDVQTTLLNGNSEQIIAALNGIVNTASSStaetqsaegavigTFTIRNEHGLHARPSANLVNEVKKFT 319
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1468514435 304 SDIRVANLDGSGEAVSAKSLMKVIGLGVKCGHRLAFRVEGPDAEAALKGIGAAIAAGLGEG 364
Cdd:PRK13779 320 AKITVENLTRGSAPVSAKSLMKIVALGVTQGHRLRFVAEGEDAQQAIEALAKAIAEGLGEN 380
|
|
| MtlA2 |
COG4668 |
Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and ... |
1-142 |
3.36e-68 |
|
Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism];
Pssm-ID: 443705 [Multi-domain] Cd Length: 143 Bit Score: 211.17 E-value: 3.36e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 1 MLKLARQQILLGQSVATKAEAIALLAGKLTEAGLVEAGYVEGMLAREAQHATYLGSGIAIPHGTTDTRHLVKSTGVMVAQ 80
Cdd:COG4668 1 MLILTKENIRLNASAANKEEAIRLAGQLLVEAGYVEPEYIDAMLEREAQVSTYLGNGIAIPHGTNEAKDLVLKTGISVLQ 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1468514435 81 FPNGIEWDEGQIAYVAIGIAAKSDEHLGILRQLTHVLGDEQAAAQLKEATDADTIINILTGA 142
Cdd:COG4668 81 FPDGVDWGDGNTVYLVIGIAAKSDEHLEILRQLARVLSDEENVEKLAKATDAEEILALLTGE 142
|
|
| PTS_IIA_fru |
cd00211 |
PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: ... |
9-139 |
1.41e-38 |
|
PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.
Pssm-ID: 238129 [Multi-domain] Cd Length: 136 Bit Score: 134.23 E-value: 1.41e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 9 ILLGQSVATKAEAIALLAGKLTEAGLVEAGYVEGMLAREAQHATYLGSGIAIPHGTTDTrhlVKSTGVMVAQFPNGIEWD 88
Cdd:cd00211 6 IRLNLKAKSKEEAIEELAQLLVAAGYVEEEYIEALLEREKEGSTGIGNGIAIPHAKSEA---VKKPGIAVLRLKEPVDFG 82
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1468514435 89 --EGQIAYVAIGIAAKS-DEHLGILRQLTHVLGDEQAAAQLKEATDADTIINIL 139
Cdd:cd00211 83 slDGQPVHLIFLLAAPDsNEHLKALSQLARLLSDEEFVEQLLNAQSKEEILALL 136
|
|
| PTS_EIIA_2 |
pfam00359 |
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; |
4-139 |
1.83e-34 |
|
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2;
Pssm-ID: 459780 [Multi-domain] Cd Length: 139 Bit Score: 123.85 E-value: 1.83e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 4 LARQQILLGQSVATKAEAIALLAGKLTEAGLVEAGYVEGMLAREAQHATYLGSGIAIPHGTTDTrhlVKSTGVMVAQFPN 83
Cdd:pfam00359 2 LDKELIFLNLEAKSKEEAIEFLADKLVEAGYVEPAYLEAILEREKEGSTGIGNGIAIPHARSEA---VKKPGIAVLTLKE 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 84 GIEWD--EGQIAYVAIGIAAKSDE--HLGILRQLTHVLGDEQAAAQLKEATDADTIINIL 139
Cdd:pfam00359 79 PVDFGseDGKPVKLIFLLAAPDNEasHLKILSQLARLLQDEEFVEKLLKAKDPEEILEIL 138
|
|
| PRK15083 |
PRK15083 |
PTS system mannitol-specific transporter subunit IICBA; Provisional |
2-144 |
1.85e-34 |
|
PTS system mannitol-specific transporter subunit IICBA; Provisional
Pssm-ID: 237905 [Multi-domain] Cd Length: 639 Bit Score: 134.03 E-value: 1.85e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 2 LKLARQQILLGQSVATKAEAIALLAGKLTEAGLVEAGYVEGMLAREAQHATYLGSGIAIPHGTTDTRHLVKSTGVMVAQF 81
Cdd:PRK15083 495 FKLGAENIFLGLKAATKEEAIRFAGEQLVKGGYVEPEYVDAMLDREKLTSTYLGESIAVPHGTVEAKDRVLKTGVVFCQY 574
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1468514435 82 PNGIEW--DEGQIAYVAIGIAAKSDEHLGILRQLTHVLGDEQAAAQLKEATDADTIINILTGATA 144
Cdd:PRK15083 575 PEGVRFgeEEDDIARLVIGIAARNNEHIQVITSLTNALDDESVIERLAHTTSVDEVLELLAGKKA 639
|
|
| PtsN |
COG1762 |
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) [Carbohydrate ... |
4-142 |
3.74e-30 |
|
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) [Carbohydrate transport and metabolism, Signal transduction mechanisms];
Pssm-ID: 441368 [Multi-domain] Cd Length: 150 Bit Score: 112.64 E-value: 3.74e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 4 LARQQILLGQSVATKAEAIALLAGKLTEAGLV--EAGYVEGMLAREAQHATYLGSGIAIPHGTTDTrhlVKSTGVMVAQF 81
Cdd:COG1762 7 LTPELILLDLEASSKEEAIEELAELLAEKGYVldKEEYLEALLEREELGSTGIGPGIAIPHARPEG---VKKPGIAVARL 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1468514435 82 PNGIEWD--EGQIAYVAIGIAA---KSDEHLGILRQLTHVLGDEQAAAQLKEATDADTIINILTGA 142
Cdd:COG1762 84 KEPVDFGamDGEPVDLVFLLAApedDSEEHLKLLAELARLLSDEEFREKLLNAKSPEEILELLKEA 149
|
|
| PtsH |
COG1925 |
HPr or related phosphotransfer protein [Signal transduction mechanisms, Carbohydrate transport ... |
275-364 |
6.73e-30 |
|
HPr or related phosphotransfer protein [Signal transduction mechanisms, Carbohydrate transport and metabolism];
Pssm-ID: 441528 [Multi-domain] Cd Length: 88 Bit Score: 109.81 E-value: 6.73e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 275 LSETFTIINPHGLHARPGAMLVKVAKEYESDIRVANldgSGEAVSAKSLMKVIGLGVKCGHRLAFRVEGPDAEAALKGIG 354
Cdd:COG1925 2 LEREVTIVNKLGLHARPAAKLVQLASKFDSEITVEK---GGKEVNAKSIMGLMSLGAKKGDEVTITAEGPDAEEALDALA 78
|
90
....*....|
gi 1468514435 355 AAIAAGLGEG 364
Cdd:COG1925 79 ALIESGFGEE 88
|
|
| PTS-HPr |
pfam00381 |
PTS HPr component phosphorylation site; |
278-358 |
2.86e-26 |
|
PTS HPr component phosphorylation site;
Pssm-ID: 459792 [Multi-domain] Cd Length: 79 Bit Score: 100.15 E-value: 2.86e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 278 TFTIINPHGLHARPGAMLVKVAKEYESDIRVANLdgsGEAVSAKSLMKVIGLGVKCGHRLAFRVEGPDAEAALKGIGAAI 357
Cdd:pfam00381 2 TVTITNPLGLHARPAALLVQLASKFDSDITLEKG---GKKVNAKSIMGLMSLGAKQGDEITISAEGEDEEEALEALAALL 78
|
.
gi 1468514435 358 A 358
Cdd:pfam00381 79 E 79
|
|
| PTS-HPr_like |
cd00367 |
Histidine-containing phosphocarrier protein (HPr)-like proteins. HPr is a central component of ... |
278-357 |
5.31e-22 |
|
Histidine-containing phosphocarrier protein (HPr)-like proteins. HPr is a central component of the bacterial phosphoenolpyruvate sugar phosphotransferase system (PTS). The PTS catalyses the phosphorylation of sugar substrates during their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate is transferred to HPr by enzyme I (EI). Phospho-HPr then transfers the phosphoryl group to one of several sugar-specific phosphoprotein intermediates. The conserved histidine in the N-terminus of HPr serves as an acceptor for the phosphoryl group of EI. In addition to the phosphotransferase proteins HPr and E1, this family also includes the closely related Carbon Catabolite Repressor (CCR) proteins which use the same phosphorylation mechanism and interact with transcriptional regulators to control expression of genes coding for utilization of less favored carbon sources.
Pssm-ID: 238217 [Multi-domain] Cd Length: 77 Bit Score: 88.33 E-value: 5.31e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 278 TFTIINPHGLHARPGAMLVKVAKEYESDIRVANLdgsGEAVSAKSLMKVIGLGVKCGHRLAFRVEGPDAEAALKGIGAAI 357
Cdd:cd00367 1 TVTITNPLGLHARPAALLVQLASKFKSDITLRKG---GRKANAKSILGLMSLGAKQGDEITLSAEGEDAEEALEALAELL 77
|
|
| PTS-HPr_Halo |
NF041319 |
phosphocarrier protein HPr; |
278-350 |
5.50e-18 |
|
phosphocarrier protein HPr;
Pssm-ID: 469216 [Multi-domain] Cd Length: 87 Bit Score: 77.72 E-value: 5.50e-18
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1468514435 278 TFTIINPHGLHARPGAMLVKVAKEYESDIRVANLDGSGEAVSAKSLMKVIGLGVKCGHRLAFRVEGPDAEAAL 350
Cdd:NF041319 4 TVTVVPEAGLHARPASKFVETANEFDAEVTVGRADDDGDLVNAASMLAVTGLGVRHGEDVRLVAEGDDAEAAL 76
|
|
| PTS_HPr_family |
TIGR01003 |
Phosphotransferase System HPr (HPr) Family; The HPr family are bacterial proteins (or domains ... |
275-358 |
1.28e-15 |
|
Phosphotransferase System HPr (HPr) Family; The HPr family are bacterial proteins (or domains of proteins) which function in phosphoryl transfer system (PTS) systems. They include energy-coupling components which catalyze sugar uptake via a group translocation mechanism. The functions of most of these proteins are not known, but they presumably function in PTS-related regulatory capacities. All seed members are stand-alone HPr proteins, although the model also recognizes HPr domains of PTS fusion proteins. This family includes the related NPr protein. [Signal transduction, PTS]
Pssm-ID: 273389 [Multi-domain] Cd Length: 82 Bit Score: 71.14 E-value: 1.28e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 275 LSETFTIINPHGLHARPGAMLVKVAKEYESDIRVANLdgsGEAVSAKSLMKVIGLGVKCGHRLAFRVEGPDAEAALKGIG 354
Cdd:TIGR01003 2 LSKEVTIINKVGLHARPAAILVKLASGFDSEITLTKN---GKEVNAKSIMGIMMLGAGQGTEVTVSADGEDEAEALEALA 78
|
....
gi 1468514435 355 AAIA 358
Cdd:TIGR01003 79 KLFE 82
|
|
| fruA |
TIGR00848 |
PTS system, fructose subfamily, IIA component; 4.A.2 The PTS Fructose-Mannitol (Fru) Family ... |
4-126 |
1.81e-15 |
|
PTS system, fructose subfamily, IIA component; 4.A.2 The PTS Fructose-Mannitol (Fru) Family Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Fru family is a large and complex family which includes several sequenced fructose and mannitol-specific permeases as well as several putative PTS permeases of unknown specificities. The fructose permeases of this family phosphorylate fructose on the 1-position. Those of family 4.6 phosphorylate fructose on the 6-position. The Fru family PTS systems typically have 3 domains, IIA, IIB and IIC, which may be found as 1 or more proteins. The fructose and mannitol transporters form separate phylogenetic clusters in this family. This model is specific for the IIA domain of the fructose PTS transporters. Also similar to the Enzyme IIA Fru subunits of the PTS, but included in TIGR01419 rather than this model, is enzyme IIA Ntr (nitrogen), also called PtsN, found in E. coli and other organisms, which may play a solely regulatory role. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273298 [Multi-domain] Cd Length: 129 Bit Score: 72.31 E-value: 1.81e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 4 LARQQILLGQSVATKAEAIALLAGKLTEAGLVE--AGYVEGMLAREAQHATYLGSGIAIPHGTTDTrhlVKSTGVMVAQF 81
Cdd:TIGR00848 2 LNKDLIFLDQQFTSKEDVIKFLANKLLENGYISdtEEFLEDLLKREEEGTTGIGDGVAIPHAKSAA---VKQPFVAIARL 78
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1468514435 82 PNGIEWD--EGQ----IAYVAIGIAAKSDEHLGILRQLTHVLGDEQAAAQL 126
Cdd:TIGR00848 79 VKGVDWQslDGKpvklIFLIAVPKDEAGNTHLKALSQLARLLLNDEFRAKL 129
|
|
| PRK13780 |
PRK13780 |
phosphocarrier protein HPr; Provisional |
276-363 |
8.41e-15 |
|
phosphocarrier protein HPr; Provisional
Pssm-ID: 237503 [Multi-domain] Cd Length: 88 Bit Score: 68.96 E-value: 8.41e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 276 SETFTIINPHGLHARPGAMLVKVAKEYESDIrvaNLDGSGEAVSAKSLMKVIGLGVKCGHRLAFRVEGPDAEAALKGIGA 355
Cdd:PRK13780 3 SKDFHITAETGIHARPATLLVQTASKFDSDI---TLEYNGKSVNLKSIMGVMSLGVGQGADITISAEGADAADAIAAIEE 79
|
....*....
gi 1468514435 356 AIAA-GLGE 363
Cdd:PRK13780 80 TMKKeGLAE 88
|
|
| PRK09765 |
PRK09765 |
PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional |
9-149 |
9.76e-12 |
|
PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional
Pssm-ID: 182066 [Multi-domain] Cd Length: 631 Bit Score: 66.30 E-value: 9.76e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 9 ILLGQSVATKAEAIALLAGKLTEAGLV--EAGYVEGMLAREAQHATYLGSGIAIPHGTTDTrhlVKSTGVMVAQFPNGIE 86
Cdd:PRK09765 12 LCLNARFTSREEAIHALAQRLAALGKIssTEQFLEEVYRRESLGPTALGEGLAVPHGKTAA---VKEAAFAVATLSEPLQ 88
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 87 W---DEGQ----IAYVAIGIAAKSDEHLGILRQLTHVLGDEQAAAQLKEATDADTIINILTGATAPKEVQ 149
Cdd:PRK09765 89 WegvDGPEavdlIFLLAIPPNEAGTTHMQLLTALTTRLADDEIRARIQSATTPDELLSALDDKGGTQPSA 158
|
|
| PRK10850 |
PRK10850 |
phosphocarrier protein Hpr; |
280-351 |
6.03e-11 |
|
phosphocarrier protein Hpr;
Pssm-ID: 182777 [Multi-domain] Cd Length: 85 Bit Score: 58.22 E-value: 6.03e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1468514435 280 TIINPHGLHARPGAMLVKVAKEYESDIrvaNLDGSGEAVSAKSLMKVIGLGVKCGHRLAFRVEGPDAEAALK 351
Cdd:PRK10850 7 TITAPNGLHTRPAAQFVKEAKGFTSEI---TVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVE 75
|
|
| PRK09913 |
PRK09913 |
PTS fructose transporter subunit IIA; |
17-142 |
6.93e-10 |
|
PTS fructose transporter subunit IIA;
Pssm-ID: 182141 [Multi-domain] Cd Length: 148 Bit Score: 56.82 E-value: 6.93e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 17 TKAEAIALLAGKLTEAGLVE--AGYVEGMLAREAQHATYLGSGIAIPHGTTDTrhlVKSTGVMVAQFPNGIEWD--EGQI 92
Cdd:PRK09913 17 GAYSILKQLATIALQNGFITdsHQFLQTLLLREKMHSTGFGSGVAVPHGKSAC---VKQPFVLFARKAQAIDWQasDGED 93
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1468514435 93 A--YVAIGI-AAKSDEHLGILRQLTHVLGDEQAAAQLKEAtDADTIINILTGA 142
Cdd:PRK09913 94 VncWICLGVpQSGEEDQVKIIGTLCRKIIHQDFIHQLKQG-DTDQVLALLNQT 145
|
|
| PRK11377 |
PRK11377 |
dihydroxyacetone kinase subunit M; Provisional |
250-363 |
4.34e-08 |
|
dihydroxyacetone kinase subunit M; Provisional
Pssm-ID: 183108 [Multi-domain] Cd Length: 473 Bit Score: 54.76 E-value: 4.34e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 250 AAAGQLA-TLAGGEGLAMLQAGPASGLSETFTIINPHGLHARPGAMLVKVAKEYESDIRvanLDGSGEAVSAKSLMKVIG 328
Cdd:PRK11377 130 AKREQLGlPSSDTEISDTCPAYDEEARSLSVVIKNRNGLHVRPASRLVYTLSTFNADML---LEKNGKCVTPESLNQIAL 206
|
90 100 110
....*....|....*....|....*....|....*
gi 1468514435 329 LGVKCGHRLAFRVEGPDAEAALKGIGAAIAAGLGE 363
Cdd:PRK11377 207 LQVRYNDTLRLIAKGPEAEEALIAFRQLAEDNFGE 241
|
|
| PRK13782 |
PRK13782 |
HPr family phosphocarrier protein; |
286-355 |
1.04e-07 |
|
HPr family phosphocarrier protein;
Pssm-ID: 172320 [Multi-domain] Cd Length: 82 Bit Score: 49.01 E-value: 1.04e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 286 GLHARPGAMLVKVAKEYESDIRvanLDGSGEAVSAKSLMKVIGLGVKCGHRLAFRVEGPDAEAALKGIGA 355
Cdd:PRK13782 13 GLQARPAALFVQEANRFHADIF---IEKDGKKVNAKSIMGLMSLAIGTGSMITIITEGSDEEEALEALAA 79
|
|
| PRK10372 |
PRK10372 |
PTS ascorbate transporter subunit IIA; |
7-145 |
1.55e-05 |
|
PTS ascorbate transporter subunit IIA;
Pssm-ID: 182417 [Multi-domain] Cd Length: 154 Bit Score: 44.58 E-value: 1.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 7 QQILLGQSVATKAEAIALLAGKLTEAGLVEAGYVEGMLAREAQHATY--LGSGIAIPHGTTDTRhlVKSTGVMVAQFPNG 84
Cdd:PRK10372 11 KSIRLQAEAETWQEAVKIGVDLLVAADVVEPRYYQAILDGVEQFGPYfvIAPGLAMPHGRPEEG--VKKTGFALVTLKKP 88
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1468514435 85 IEW-----DEGQIAYVAIGIAAKSDEHLGIlRQLTHVLGDEQAAAQLKEATDADTIINILTGATAP 145
Cdd:PRK10372 89 LEFnhednDPVDILITMAAVDANTHQEVGI-MQIVNLFEDEANFDRLRACRTEQEVLDLIDRTNAA 153
|
|
| nitro_reg_IIA |
TIGR01419 |
PTS IIA-like nitrogen-regulatory protein PtsN; This model describes a full-length protein of ... |
20-140 |
4.92e-05 |
|
PTS IIA-like nitrogen-regulatory protein PtsN; This model describes a full-length protein of about 160 residues closely related to the fructose-specific phosphotransferase (PTS) system IIA component. It is a regulatory protein found only in species with a phosphoenolpyruvate-protein phosphotransferase (enzyme I of PTS systems) and an HPr-like phosphocarrier protein, but not all species have a IIC-like permease. Members of this family are found in Proteobacteria, Chlamydia, and the spirochete Treponema pallidum. [Signal transduction, PTS]
Pssm-ID: 162350 [Multi-domain] Cd Length: 145 Bit Score: 42.78 E-value: 4.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 20 EAIALLAGKLTeaGLVEAGYVEGMLAREAQHATYLGSGIAIPHGTTDtrHLVKSTGVMV-AQFPNGIEWDEGQIAYVAIG 98
Cdd:TIGR01419 25 EIISLLAAREL--SLPEQDVFECLLAREKLGSTGVGNGIAIPHGRLS--GLKQPVGVFIrLDAPVDFDALDGKPVDLLFA 100
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1468514435 99 IAAKSD---EHLGILRQLTHVLGDEQAAAQLKEATdADTIINILT 140
Cdd:TIGR01419 101 LLVPENataEHLEALSRIARKLSDKTICRRLRAAS-AEEIYQILT 144
|
|
| PRK10897 |
PRK10897 |
PTS phosphocarrier protein NPr; |
275-363 |
4.27e-04 |
|
PTS phosphocarrier protein NPr;
Pssm-ID: 182819 [Multi-domain] Cd Length: 90 Bit Score: 39.04 E-value: 4.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 275 LSETFTIINPHGLHARPGAMLVKVAKEYESDIRVANldGSGEAVSAKSLMKVIGLGVKCGHRLAFRVEGPDAEAALKGIG 354
Cdd:PRK10897 3 VKQTVEIKNKLGMHARPAMKLFELVQGFDAEVLLRN--DEGTEAEANSVIALLMLDSAKGRQIEVEATGPQEEEALAAVI 80
|
....*....
gi 1468514435 355 AAIAAGLGE 363
Cdd:PRK10897 81 ALFNSGFDE 89
|
|
| cmtB |
PRK09854 |
PTS mannitol transporter subunit IIA; |
20-142 |
9.10e-03 |
|
PTS mannitol transporter subunit IIA;
Pssm-ID: 182114 [Multi-domain] Cd Length: 147 Bit Score: 36.51 E-value: 9.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1468514435 20 EAIALLAGKLTEAGLVEAGYVEGMLAREAQHATY--LGSGIAIPHGTTDTRHLvkSTGVMVAQFPNGIEW-DEGQIAYVA 96
Cdd:PRK09854 23 EAIDFSMVSLLDKNYISENYIQAIKDSTINNGPYyiLAPGVAMPHARPECGAL--KTGMSLTLLEQGVYFpGNDEPIKLL 100
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1468514435 97 IGI-AAKSDEHLGILRQLTHVLGDEQAAAQLKEATDADTIINILTGA 142
Cdd:PRK09854 101 IGLsAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISRG 147
|
|
| |
