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Conserved domains on  [gi|1461657095|ref|WP_116486324|]
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DUF3884 family protein [Streptococcus parauberis]

Protein Classification

DUF3884 family protein( domain architecture ID 10586575)

DUF3884 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3884 pfam13024
Protein of unknown function (DUF3884); This family of proteins is functionally uncharacterized. ...
 17-90 1.63e-37

Protein of unknown function (DUF3884); This family of proteins is functionally uncharacterized. However several proteins are annotated as Tagatose 1,6-diphosphate aldolase, but evidence to support this could not be found. This family of proteins is found in bacteria. Proteins in this family are typically between 61 and 106 amino acids in length. There are two completely conserved residues (Y and F) that may be functionally important.


:

Pssm-ID: 338588  Cd Length: 73  Bit Score: 120.34  E-value: 1.63e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1461657095 17 YEKVYIVNFEKYPYIPYIDQNVLKSLGKWYVSTGGEWICHSDLEWDDFKTLFNNLLEGSLKGnVRYEMDYMPFQ 90
Cdd:pfam13024  1 LEPVYQVKFKKVPNQLLIDERLLKELGKWLVRTGREWACHSSLSAKEFKNTFLELTGLSANE-VYISADTDGFF 73
 
Name Accession Description Interval E-value
DUF3884 pfam13024
Protein of unknown function (DUF3884); This family of proteins is functionally uncharacterized. ...
 17-90 1.63e-37

Protein of unknown function (DUF3884); This family of proteins is functionally uncharacterized. However several proteins are annotated as Tagatose 1,6-diphosphate aldolase, but evidence to support this could not be found. This family of proteins is found in bacteria. Proteins in this family are typically between 61 and 106 amino acids in length. There are two completely conserved residues (Y and F) that may be functionally important.


Pssm-ID: 338588  Cd Length: 73  Bit Score: 120.34  E-value: 1.63e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1461657095 17 YEKVYIVNFEKYPYIPYIDQNVLKSLGKWYVSTGGEWICHSDLEWDDFKTLFNNLLEGSLKGnVRYEMDYMPFQ 90
Cdd:pfam13024  1 LEPVYQVKFKKVPNQLLIDERLLKELGKWLVRTGREWACHSSLSAKEFKNTFLELTGLSANE-VYISADTDGFF 73
 
Name Accession Description Interval E-value
DUF3884 pfam13024
Protein of unknown function (DUF3884); This family of proteins is functionally uncharacterized. ...
 17-90 1.63e-37

Protein of unknown function (DUF3884); This family of proteins is functionally uncharacterized. However several proteins are annotated as Tagatose 1,6-diphosphate aldolase, but evidence to support this could not be found. This family of proteins is found in bacteria. Proteins in this family are typically between 61 and 106 amino acids in length. There are two completely conserved residues (Y and F) that may be functionally important.


Pssm-ID: 338588  Cd Length: 73  Bit Score: 120.34  E-value: 1.63e-37
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1461657095 17 YEKVYIVNFEKYPYIPYIDQNVLKSLGKWYVSTGGEWICHSDLEWDDFKTLFNNLLEGSLKGnVRYEMDYMPFQ 90
Cdd:pfam13024  1 LEPVYQVKFKKVPNQLLIDERLLKELGKWLVRTGREWACHSSLSAKEFKNTFLELTGLSANE-VYISADTDGFF 73
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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