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Conserved domains on  [gi|1438035728|ref|WP_114647240|]
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MULTISPECIES: autotransporter outer membrane beta-barrel domain-containing protein [Citrobacter]

Protein Classification

autotransporter outer membrane beta-barrel domain-containing protein( domain architecture ID 13802942)

autotransporter outer membrane beta-barrel domain-containing protein may function as an adhesin that mediates bacterial attachment to host cells, and may play a role in virulence

CATH:  2.40.128.130
Gene Ontology:  GO:0015474
PubMed:  9778731
SCOP:  4001769
TCDB:  1.B.12

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK14849 super family cl33023
autotransporter barrel domain-containing lipoprotein;
894-2318 0e+00

autotransporter barrel domain-containing lipoprotein;


The actual alignment was detected with superfamily member PRK14849:

Pssm-ID: 184851 [Multi-domain]  Cd Length: 1806  Bit Score: 737.70  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  894 VDGGILENHSDVTVNGvAVNIQGANSEVTNSGVVTATDGQAAYLVGNNATLALNGNGETRAAGTAHG-ILLDTGAKGLTV 972
Cdd:PRK14849   367 VDSGIITAGMKETGTG-NITVKDKNSVITNLGTNLGYDGHGEMNISNEGLVVSNGGSSLGYGETGVGnVSITTGGMWEVN 445
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  973 DGATITMDSAGSGNAieNKAAISGIQLKNTTINVGNGVGVHTGASMAQTNS-GTININGSGTGILFENVADGSdtdqTLD 1051
Cdd:PRK14849   446 KNVYTTIGVAGVGNL--NISDGGKFVSQNITFLGDKASGIGTLNLMDATSSfDTVGINVGNFGSGIVNVSNGA----TLN 519
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1052 MSDSRDLVINVNGAQGNGIITRASTDLKTGAS------VNVLdSDGKSALVVQGTTKNVEQSGKLTSVSDKAAVVDLNNG 1125
Cdd:PRK14849   520 STGYGFIGGNASGKGIVNISTDSLWNLKTSSTnaqllqVGVL-GKGELNITTGGIVKARDTQIALNDKSKGDVRVDGQNS 598
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1126 VLESFinkGDILALDASHTALEMNSGNgitfTNASGANI--------VGQVNLLNGDNTVILESG--STATDITSGSGKD 1195
Cdd:PRK14849   599 LLETF---NMYVGTSGTGTLTLTNNGT----LNVEGGEVylgvfepaVGTLNIGAAHGEAAADAGfiTNATKVEFGLGEG 671
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1196 NFILKNISENESGSLFTSLNGGSGDDTLQLENSSYTLTRADaiNGMEHIALANNSVFTLD----NVALGLGDDELDGAGT 1271
Cdd:PRK14849   672 VFVFNHTNNSDAGYQVDMLITGDDKDGKVIHDAGHTVFNAG--NTYSGKTLVNDGLLTIAshtaDGVTGMGSSEVTIASP 749
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1272 GyTIDGSSqlSIKNTADVTFKSHLAGTGVVAVDTANNHFNFDANNAADG-FAGTLALTNSRFELDGLNTQALSNATLQAG 1350
Cdd:PRK14849   750 G-TLDILA--STNSAGDYTLTNALKGDGLMRVQLSSSDKMFGFTHATGTeFAGVAQLKDSTFTLERDNTAALTHAMLQSD 826
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1351 NGSITHVGSGEQNIGGLDFKGGTVQFDGVTPGNPTALG-----TIHAGAMD---------LSGRGTVQVDSGTVSNDrPQ 1416
Cdd:PRK14849   827 SENTTSVKVGEQSIGGLAMNGGTLIFDTDIPAATLAEGyisvdTLVVGAGDytwkgrnyqVNGTGDVLIDVPKPWND-PM 905
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1417 AD---THRPILEQDDAQALIKLATSDTAVqGGAGNLVLKDKDGNVISDSITADIAQNGVVVAKGTYDYRLTGGDSDdGLY 1493
Cdd:PRK14849   906 ANnplTTLNLLEHDDSHVGVQLVKAQTVI-GSGGSLTLRDLQGDEVEADKTLHIAQNGTVVAEGDYGFRLTTAPGD-GLY 983
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1494 VSYGLTQVDLLGKDADALIlDANGKSGNAADLSARVTGSGDLAFDSQKgqTVTLSNMDNDYSGVTDVRSGNLAMLNDNVL 1573
Cdd:PRK14849   984 VNYGLKALNIHGGQKLTLA-EHGGAYGATADMSAKIGGEGDLAINTVR--QVSLSNGQNDYQGATYVQMGTLRTDADGAL 1060
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1574 GNTRELKLAGDTGFDMRGHSQTIGKLTAESGSLTDLNGGHLTLTNGGEASGVLTGDGELTVAGGTLNVSGANTGLKATTT 1653
Cdd:PRK14849  1061 GNTRELNISNAAIVDLNGSTQTVETFTGQMGSTVLFKEGALTVNKGGISQGELTGGGNLNVTGGTLAIEGLNARYNALTS 1140
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1654 IAQGATAVLDNTLGLGTGDIVAAGLLNLSNATGVLYNSISDAGKVALDA-SDVVLAGNNSHFAGTFDIDNDSTLTASSAQ 1732
Cdd:PRK14849  1141 ISPNAEVSLDNTQGLGRGNIANDGLLTLKNVTGELRNSISGKGIVSATArTDVELDGDNSRFVGQFNIDTGSALSVNEQK 1220
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1733 QLGTSAIQNAGKFVLNTHENWSLENGVTGSGSVVKNGSGNVTLS-DSAQWTGATDINAGGLTLGSaDNAFTLASHQVNIG 1811
Cdd:PRK14849  1221 NLGDASVINNGLLTISTERSWAMTHSISGSGDVTKLGTGILTLNnDSAAYQGTTDIVGGEIAFGS-DSAINMASQHINIH 1299
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1812 KDGRLSGFGGVAGNManqgTLLIGDDVSAARRavsspvsfTVGGNLTNSGDIWTGSKGKDAGNQLVVNGNYQGDGGHLHL 1891
Cdd:PRK14849  1300 NSGVMSGNVTTAGDV----NVMPGGTLRVAKT--------TIGGNLENGGTVQMNSEGGKPGNVLTVNGNYTGNNGLMTF 1367
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1892 NTALNDDNSVTDKLIVKGNTSGTTGVSVTNAGGSGAQTINGIEVIHVDGQSDGEFT-QDGRIVAGAYDYSLARGQGDNNG 1970
Cdd:PRK14849  1368 NATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFAlTTGTVEAGAYVYTLAKGKGNDEK 1447
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1971 NWYLTSHKTDPNPGPGPKP-------EPD----IRPEPGSWTANLAAANTLFVTRLHDRLGETQYIDALTGEKKVTSMWM 2039
Cdd:PRK14849  1448 NWYLTSKWDGVTPPDTPDPinnppvvDPEgpsvYRPEAGSYISNIAAANSLFSHRLHDRLGEPQYIDSLHSQGSASSMWM 1527
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2040 RQAGGHNAWRDSSGQLKTQSNRYVMQVGGDVARWSGDGLDRWHLGVMAGYGHNSSNTRSSSTGYRSDGSVNGYSAGVYAT 2119
Cdd:PRK14849  1528 RHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYAT 1607
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2120 WYANDETHQGAYLDSWAQYSWFNNSVKGQDIQSESYKSKGITGSLELGYTHKLGEFAGSKGSKNEWFIQPQAQAIWMGVE 2199
Cdd:PRK14849  1608 WYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVK 1687
                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2200 ADDHRESNGTRISGEGDGNVQTRLGVRTFLKGHSAIDEGKAREFQPFVEVNWLHNTRDFGTKMDGVSIRQEGARNLGEIK 2279
Cdd:PRK14849  1688 DSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVR 1767
                         1450      1460      1470
                   ....*....|....*....|....*....|....*....
gi 1438035728 2280 TGVEGQINPQLNVWGNVGVQLGDKGYNDTSAMIGIKYNF 2318
Cdd:PRK14849  1768 TGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW 1806
ESPR pfam13018
Extended Signal Peptide of Type V secretion system; This conserved domain is called ESPR for ...
1-50 5.17e-11

Extended Signal Peptide of Type V secretion system; This conserved domain is called ESPR for Extended Signal Peptide Region. It is present at the N-terminus of the signal peptides of proteins belonging to the Type V secretion systems, including the autotransporters (T5aSS), TpsA exoproteins of the two-partner system (T5bSS) and trimeric autotransporters (TAAs). So far, the ESPR is present only in Gram-negative bacterial proteins originating from the classes Beta- and Gamma-proteobacteria. ESPR severely impairs inner membrane translocation, suggesting that it adopts a particular conformation or it interacts with a cytoplasmic or inner membrane co-factor, prior to exportation. Deletion of ESPR causes mis-folding of the TAAs passenger domain in the periplasm, substantially impairing its translocation across the outer membrane.


:

Pssm-ID: 463773 [Multi-domain]  Cd Length: 50  Bit Score: 59.47  E-value: 5.17e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 1438035728    1 MNKVFKVIWNSRLNIFVVASELARGYCKSTAGNTSFGSLLKYPLMSALAV 50
Cdd:pfam13018    1 MNKIYRVIWNRARGAWVVVSELAKSKGKSSSSSSGSAAALAALLLLLLAA 50
AidA super family cl34620
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
554-983 2.70e-07

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


The actual alignment was detected with superfamily member COG3468:

Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 56.11  E-value: 2.70e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  554 GNGTYNGSDTSQIIIGSKVQNATAIDVGGNATLDQKGSININGAVTGESVSSNIGIIARAGTqaakvvhdgiINLNGLNS 633
Cdd:COG3468      2 ASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGA----------GGGGGGAG 71
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  634 TGIQVLENGQITSSGTININGGLDPVTHYANYGIYVQGEKALAILSGTVNLSGDGAIGVHARDKGEIDVTENGTVNFKDG 713
Cdd:COG3468     72 SGGGLAGAGSGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGG 151
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  714 VNQTGYYIFGAGSTIKNAASSVQDAsTQNATLYRVDGGASFYGSADSSAQLNASGDGATIIRTTGAGSHFDSGKLALSVT 793
Cdd:COG3468    152 TGAAAAGGGTGSGGGGSGGGGGAGG-GGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGS 230
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  794 GTGATGIRIEGGATGEITSDAVIVRVAGKDTTAGIVDGNYYNLDGSVNDAQKGDSVLTSYAVLETANTADGAFGYIARNG 873
Cdd:COG3468    231 GGNTGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGG 310
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  874 GRLIHEGSIDFTADNSTGILVDGGILENHSDVTVNGVAVNIQGANSEVTNSGVVTATDGQAAYLVGNNATLALNGNGETR 953
Cdd:COG3468    311 GNGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDG 390
                          410       420       430
                   ....*....|....*....|....*....|
gi 1438035728  954 AAGTAHGILLDTGAKGLTVDGATITMDSAG 983
Cdd:COG3468    391 VGTGLTTGGTGNNGGGGVGGGGGGGLTLTG 420
AidA super family cl34620
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
187-602 9.99e-03

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


The actual alignment was detected with superfamily member COG3468:

Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 41.09  E-value: 9.99e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  187 VGAGASLDVDVGQKTGNWVGAADNQFNVIMKSSVNTQNLSSAYHVTNGGSLNYQSKTVVQLGNSDNNIKDASNALAWMTA 266
Cdd:COG3468     21 GGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNSTGGGGGNSGTGG 100
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  267 ADFVGEFDSVIGKQNITNIDEFKAYNDALIQALQDGQIQLTEAQYADELNKARDTSLHGIFADTGSIAADDAIRAFVNRD 346
Cdd:COG3468    101 TGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGGGGSGGGGGAGGGGGG 180
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  347 AVSYIHGVGSGTNVVIDKDANIQLVGSDATVVNLeNGARLTNNGTLGTAGNTYRGAYIIAARNTSFVDNNGVIDAGTNPE 426
Cdd:COG3468    181 GAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGG-GGGGGGAGGATGGAGSGGNTGGGVGGGGGSAGGTGGGGLTGGGAA 259
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  427 MADFFSSGAAGVAQGAHTAILANGSSVINNNSSGVINVAARGNYYGNTGVLMSGNATLNNDGAINIAASNEANSILGNGA 506
Cdd:COG3468    260 GTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGGGSGGGGGGGGGGGGG 339
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  507 NIGVVTQQNTTFNNRGTLYIGRLAQRAPDDANTDIAIKQQSIGVHLYGNGTYNGSDTSQIIIGSKVQNATAIDVGGNATL 586
Cdd:COG3468    340 GTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGNNGGGGVGGGGGGGLTLT 419
                          410
                   ....*....|....*.
gi 1438035728  587 DqkGSININGAVTGES 602
Cdd:COG3468    420 G--GTLTVNGNYTGNN 433
 
Name Accession Description Interval E-value
PRK14849 PRK14849
autotransporter barrel domain-containing lipoprotein;
894-2318 0e+00

autotransporter barrel domain-containing lipoprotein;


Pssm-ID: 184851 [Multi-domain]  Cd Length: 1806  Bit Score: 737.70  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  894 VDGGILENHSDVTVNGvAVNIQGANSEVTNSGVVTATDGQAAYLVGNNATLALNGNGETRAAGTAHG-ILLDTGAKGLTV 972
Cdd:PRK14849   367 VDSGIITAGMKETGTG-NITVKDKNSVITNLGTNLGYDGHGEMNISNEGLVVSNGGSSLGYGETGVGnVSITTGGMWEVN 445
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  973 DGATITMDSAGSGNAieNKAAISGIQLKNTTINVGNGVGVHTGASMAQTNS-GTININGSGTGILFENVADGSdtdqTLD 1051
Cdd:PRK14849   446 KNVYTTIGVAGVGNL--NISDGGKFVSQNITFLGDKASGIGTLNLMDATSSfDTVGINVGNFGSGIVNVSNGA----TLN 519
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1052 MSDSRDLVINVNGAQGNGIITRASTDLKTGAS------VNVLdSDGKSALVVQGTTKNVEQSGKLTSVSDKAAVVDLNNG 1125
Cdd:PRK14849   520 STGYGFIGGNASGKGIVNISTDSLWNLKTSSTnaqllqVGVL-GKGELNITTGGIVKARDTQIALNDKSKGDVRVDGQNS 598
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1126 VLESFinkGDILALDASHTALEMNSGNgitfTNASGANI--------VGQVNLLNGDNTVILESG--STATDITSGSGKD 1195
Cdd:PRK14849   599 LLETF---NMYVGTSGTGTLTLTNNGT----LNVEGGEVylgvfepaVGTLNIGAAHGEAAADAGfiTNATKVEFGLGEG 671
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1196 NFILKNISENESGSLFTSLNGGSGDDTLQLENSSYTLTRADaiNGMEHIALANNSVFTLD----NVALGLGDDELDGAGT 1271
Cdd:PRK14849   672 VFVFNHTNNSDAGYQVDMLITGDDKDGKVIHDAGHTVFNAG--NTYSGKTLVNDGLLTIAshtaDGVTGMGSSEVTIASP 749
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1272 GyTIDGSSqlSIKNTADVTFKSHLAGTGVVAVDTANNHFNFDANNAADG-FAGTLALTNSRFELDGLNTQALSNATLQAG 1350
Cdd:PRK14849   750 G-TLDILA--STNSAGDYTLTNALKGDGLMRVQLSSSDKMFGFTHATGTeFAGVAQLKDSTFTLERDNTAALTHAMLQSD 826
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1351 NGSITHVGSGEQNIGGLDFKGGTVQFDGVTPGNPTALG-----TIHAGAMD---------LSGRGTVQVDSGTVSNDrPQ 1416
Cdd:PRK14849   827 SENTTSVKVGEQSIGGLAMNGGTLIFDTDIPAATLAEGyisvdTLVVGAGDytwkgrnyqVNGTGDVLIDVPKPWND-PM 905
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1417 AD---THRPILEQDDAQALIKLATSDTAVqGGAGNLVLKDKDGNVISDSITADIAQNGVVVAKGTYDYRLTGGDSDdGLY 1493
Cdd:PRK14849   906 ANnplTTLNLLEHDDSHVGVQLVKAQTVI-GSGGSLTLRDLQGDEVEADKTLHIAQNGTVVAEGDYGFRLTTAPGD-GLY 983
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1494 VSYGLTQVDLLGKDADALIlDANGKSGNAADLSARVTGSGDLAFDSQKgqTVTLSNMDNDYSGVTDVRSGNLAMLNDNVL 1573
Cdd:PRK14849   984 VNYGLKALNIHGGQKLTLA-EHGGAYGATADMSAKIGGEGDLAINTVR--QVSLSNGQNDYQGATYVQMGTLRTDADGAL 1060
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1574 GNTRELKLAGDTGFDMRGHSQTIGKLTAESGSLTDLNGGHLTLTNGGEASGVLTGDGELTVAGGTLNVSGANTGLKATTT 1653
Cdd:PRK14849  1061 GNTRELNISNAAIVDLNGSTQTVETFTGQMGSTVLFKEGALTVNKGGISQGELTGGGNLNVTGGTLAIEGLNARYNALTS 1140
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1654 IAQGATAVLDNTLGLGTGDIVAAGLLNLSNATGVLYNSISDAGKVALDA-SDVVLAGNNSHFAGTFDIDNDSTLTASSAQ 1732
Cdd:PRK14849  1141 ISPNAEVSLDNTQGLGRGNIANDGLLTLKNVTGELRNSISGKGIVSATArTDVELDGDNSRFVGQFNIDTGSALSVNEQK 1220
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1733 QLGTSAIQNAGKFVLNTHENWSLENGVTGSGSVVKNGSGNVTLS-DSAQWTGATDINAGGLTLGSaDNAFTLASHQVNIG 1811
Cdd:PRK14849  1221 NLGDASVINNGLLTISTERSWAMTHSISGSGDVTKLGTGILTLNnDSAAYQGTTDIVGGEIAFGS-DSAINMASQHINIH 1299
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1812 KDGRLSGFGGVAGNManqgTLLIGDDVSAARRavsspvsfTVGGNLTNSGDIWTGSKGKDAGNQLVVNGNYQGDGGHLHL 1891
Cdd:PRK14849  1300 NSGVMSGNVTTAGDV----NVMPGGTLRVAKT--------TIGGNLENGGTVQMNSEGGKPGNVLTVNGNYTGNNGLMTF 1367
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1892 NTALNDDNSVTDKLIVKGNTSGTTGVSVTNAGGSGAQTINGIEVIHVDGQSDGEFT-QDGRIVAGAYDYSLARGQGDNNG 1970
Cdd:PRK14849  1368 NATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFAlTTGTVEAGAYVYTLAKGKGNDEK 1447
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1971 NWYLTSHKTDPNPGPGPKP-------EPD----IRPEPGSWTANLAAANTLFVTRLHDRLGETQYIDALTGEKKVTSMWM 2039
Cdd:PRK14849  1448 NWYLTSKWDGVTPPDTPDPinnppvvDPEgpsvYRPEAGSYISNIAAANSLFSHRLHDRLGEPQYIDSLHSQGSASSMWM 1527
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2040 RQAGGHNAWRDSSGQLKTQSNRYVMQVGGDVARWSGDGLDRWHLGVMAGYGHNSSNTRSSSTGYRSDGSVNGYSAGVYAT 2119
Cdd:PRK14849  1528 RHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYAT 1607
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2120 WYANDETHQGAYLDSWAQYSWFNNSVKGQDIQSESYKSKGITGSLELGYTHKLGEFAGSKGSKNEWFIQPQAQAIWMGVE 2199
Cdd:PRK14849  1608 WYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVK 1687
                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2200 ADDHRESNGTRISGEGDGNVQTRLGVRTFLKGHSAIDEGKAREFQPFVEVNWLHNTRDFGTKMDGVSIRQEGARNLGEIK 2279
Cdd:PRK14849  1688 DSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVR 1767
                         1450      1460      1470
                   ....*....|....*....|....*....|....*....
gi 1438035728 2280 TGVEGQINPQLNVWGNVGVQLGDKGYNDTSAMIGIKYNF 2318
Cdd:PRK14849  1768 TGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW 1806
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
1456-2318 2.25e-109

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 371.20  E-value: 2.25e-109
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1456 GNVISDSITADIAQNGVVVAKGTYDYRLTGGDSDDGLYVSYGLTQVDLLGKDADALILDANGKSGNAADLSARVTGSGDL 1535
Cdd:COG3468      7 GGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGG 86
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1536 AFDSQKGQTVTLSNMDNDYSGVTDVRSGNLAMLNDNVLGNTRELKLAGDTGFDMRGHSQTIGKLTAESGSLTDLNGGHLT 1615
Cdd:COG3468     87 NSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGGG 166
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1616 LTNGGEASGVLTGDGELTVAGGTLNVSGANTGLKATTTIAQGATAVLDNTLGLGTGDIVAAGLLNLSNATGVLYNSISDA 1695
Cdd:COG3468    167 GSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGSAG 246
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1696 GKVALDASDVVLAGNNSHFAGTFDIDNDSTLTASSAQQLGTSAIQNAGKFVLNTHENWSLENGVTGSGSVVKNGSGNVTL 1775
Cdd:COG3468    247 GTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGGGS 326
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1776 SDSAQWTGATDINAGGLTLGSADNAFTLAShqvnIGKDGRLSGFGGVAGNMANQGTLLIGDDVSAARRAVSSPVSFTVGG 1855
Cdd:COG3468    327 GGGGGGGGGGGGGGTTLNGAGSAGGGTGAA----LAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGN 402
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1856 NLTNSGDIWTGSKGKDAGNQLVVNGNYQGDGGHLHLNTALNDDNSVTDKLIVKGNTSGTTGVSVTNAGGSGAQTINGIEV 1935
Cdd:COG3468    403 NGGGGVGGGGGGGLTLTGGTLTVNGNYTGNNGTLVLNTVLGDDNSPTDRLVVNGNTSGTTGVRVNNAGGLGAQTVNGIEV 482
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1936 IHVDGQSDGEFTQDGRIVAGAYDYSLARGQ-GDNNGNWYLTSHKTDPNPgpgpkPEPDIRPEPGSWTANLAAANTLFVT- 2013
Cdd:COG3468    483 VEVNGASDGAFTLGGRVVAGAYEYTLYQGGsGGDDGNWYLRSTLTPPDP-----PTPVYRPEVPSYLANPAAANGLFELg 557
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2014 RLHDRLGETQYIDalTGEKKVTSMWMRQAGGHNAWRDSSGQLKTQSNRYVMQVGGDVARWSGDGlDRWHLGVMAGYGHNS 2093
Cdd:COG3468    558 TLHDRLGERRYTD--TGESDNSGAWLRVEGGHNRSRDSSGQLDYDSNRYGLQLGGDLLQWEDGG-GRLHVGVMAGYGNGD 634
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2094 SNTRSSSTgYRSDGSVNGYSAGVYATWYANdethQGAYLDSWAQYSWFNNSVKGQDIQ--SESYKSKGITGSLELGYTHK 2171
Cdd:COG3468    635 SDVRSRAT-GTGKGDVDGYSLGLYGTWYGN----NGFYVDGVLQYSWFDNDVSSDDLGgvTGSYDGNGYSASLEAGYPFK 709
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2172 LGEfagskgsknEWFIQPQAQAIWMGVEADDHRESNGTRISGEGDGNVQTRLGVRTFLKGHSaideGKAREFQPFVEVNW 2251
Cdd:COG3468    710 LGE---------GWSLEPQAQLIYQGVDFDDFTDSNGTRVSGDDGDSLQGRLGLRLGYEFHW----DDGRALQPYLEANW 776
                          810       820       830       840       850       860       870
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2252 LHNT-RDFGTKMDGVSIRQEGARNLGEIKTGVEGQINPQLNVWGNVGVQLGDKGYN--DTSAMIGIKYNF 2318
Cdd:COG3468    777 LHEFlGDNSVTVNGVSFSQDGSGTWGELGLGVTGQLNKNLSLYGDVGYQTGLDGYDssDTSGNLGVRYSF 846
autotrans_barl TIGR01414
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, ...
1869-2318 1.70e-102

outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]


Pssm-ID: 273608 [Multi-domain]  Cd Length: 431  Bit Score: 336.66  E-value: 1.70e-102
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1869 GKDAGNQLVVNGNYQGDGGhLHLNTALNDDNSVTDKLIVKGNTSGTTGVSVTNAGGSGAQTINGIEVIHVDGQSDGEFTQ 1948
Cdd:TIGR01414    1 PGGAFNTLTVNGLYTGNGG-FVMNTDLGGDNSQTDRLVVNGNASGTTGVVVNNIGGEGAQTGDGITLVTVNGGSDAAFTL 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1949 D-GRIVAGAYDYSLARGQGDNNGNWYLTSHKTDPnPGPGPKPEPDIRPEPGSWTANLAAANTLF-VTRLHDRLGETQYid 2026
Cdd:TIGR01414   80 AnGKVDAGAYTYTLYKNGTEDNNNWYLTSSLPDL-TPPGQQLSPTYRAEAGSYAANANAALFLAeLDTLRQRMGDLRS-- 156
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2027 alTGEKKVTSMWMRQAGGHNAWRDSSGQLKTQSNRYVMQVGGDVARWsGDGLDRWHLGVMAGYGHNSSNTRSSStgYRSD 2106
Cdd:TIGR01414  157 --AARDAGNGVWARIFGGDNHLDGDAGAAGYDQNTTGVQLGGDILLA-GNADGDLHVGLMAGYAKADIKTRSYK--YGGK 231
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2107 GSVNGYSAGVYATWYANDethqGAYLDSWAQYSWFNNSVKGQDIQ---SESYKSKGITGSLELGYTHKLGEfagskgskN 2183
Cdd:TIGR01414  232 GKVDGYGLGLYGTWLQDS----GAYVDGVLQYSRFRNDVSSTGSNgkvSGKYNSNGFTASLEAGYRYNLGG--------N 299
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2184 EWFIQPQAQAIWMGVEADDHRESNGTRISGEGDGNVQTRLGVRTflkgHSAIDEGKAREFQPFVEVNWLHN-TRDFGTKM 2262
Cdd:TIGR01414  300 GWYVEPQAQLSYFGVSGDDYKESNGTRVLGGGGDSLQGRLGLRV----GYQFDLGTGRAVKPYLKANVLHEfKGGTGVRV 375
                          410       420       430       440       450
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1438035728 2263 DGVSIRQEGARNLGEIKTGVEGQINPQLNVWGNVGVQLGDKGYNDTSAMIGIKYNF 2318
Cdd:TIGR01414  376 NGVTIRNDFSGTRAEYGVGVNAKIKDNLSLYADVDYQKGGKKYTDNQGNLGVRYSF 431
auto_AIDA-I NF033176
autotransporter adhesin AIDA-I;
1610-2318 1.56e-96

autotransporter adhesin AIDA-I;


Pssm-ID: 380183 [Multi-domain]  Cd Length: 1287  Bit Score: 343.18  E-value: 1.56e-96
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1610 NGGHLTLTNGGEASGVLTGDG--ELTVAGGtlNVSGANTGLKATTTIAQGATAvLDNTLGLGTGDIVAAG-LLNLSNATG 1686
Cdd:NF033176   570 SGGLQAVSSGGSASATVINEGgsQFVYEGG--NVTGTVIKNGGAIRVDSGASA-LNIALSSGGNLFTSTGaTVTGTNHYG 646
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1687 VLYNSISDAGKVALDASDVVLAGNNS-------HFAGTFDIDN----DSTLTASSAQQLGTSAIQNAGKFVLNTHENWSL 1755
Cdd:NF033176   647 SFSVSQNHASNVVLENGGLLAVTSGStatdttvNSAGRLRIDEggalDGTTTINADGIVAGAKIKNDGDFILNLAGDYDF 726
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1756 ENGVTGSGSVVKNGSGNVTLSDSAQWTGATDINAGGLTLGSAD-NAFTLASHQVNIGkdgrLSGFGGVAGNMANQGTLLI 1834
Cdd:NF033176   727 NTELSGNGALVKDNSGVMSYEGTLTQARGVNVKNGGIILGSAVvNADMAVSQNAYIN----ISDQATINGSVNNKGSVVI 802
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1835 GDDVSAARRAVSSPVSF--------TVGGNLTNSGDIWTGSKGKDAGNQLVVNGNYQGDGGHLHLNTALNDDNSVTDKLI 1906
Cdd:NF033176   803 NNSIINGNITNDADLSFgtakllsaTVNGSLVNNKNIILNPTKESAGNTLTVSNYTGTPGSVISLGGVLEGDNSLTDRLV 882
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1907 VKGNTSGTTGVSVTNAGGSGAQTINGIEVIHVDGQSDGEFTQDGRIVAGAYDYSLARGQ--GDNNGNWYLTSHKTDPNpg 1984
Cdd:NF033176   883 VKGNTSGQSDIVYVNEGGSGGQTIEGINIISVEGNSDAEFSLKNRVVAGAYDYTLQKGNvsGTDKKGWYLTSHLPTSD-- 960
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1985 pgpkpEPDIRPEPGSWTANLAAANTLFVTRLHDRLGETQYIDALTGEKkvTSMWMRQAGGHNAWRDSSGQLKTQSNRYVM 2064
Cdd:NF033176   961 -----TRQYRPENGSYATNMALANSLFLMDLNERKQFSAVNDNTQPES--ASVWMKITGGRTSGKLSDGQNKTTTNQFIN 1033
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2065 QVGGDVARWSGDGLDRWHLGVMAGYGHNSSNTRSSSTGYRSDGSVNGYSAGVYATWYANDETHQGAYLDSWAQYSWFNNS 2144
Cdd:NF033176  1034 QLGGDIYKYHAEKLGDFTLGIMGGYANAKGKTINHTSKKGARNTLDGYSAGLYGTWYQNGANATGLFAETWMQYNWFNAS 1113
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2145 VKGQDIQSESYKSKGITGSLELGYTHKLGEFAGSKGSKNEWFIQPQAQAIWMGVEADDHRESNGTRISGEGDGNVQTRLG 2224
Cdd:NF033176  1114 VKGDGLEEEKYNLNGLTASVGGGYNLNVHTWTSPEGIKGEFWLQPHLQAVWMGVTPDTHQEDNGTVVQGTGKNNLQTKAG 1193
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2225 VRTFLKGHSAIDEGKAREFQPFVEVNWLHNTRDFGTKMDGVSIRQEGARNLGEIKTGVEGQINPQLNVWGNVGVQLGDKG 2304
Cdd:NF033176  1194 IRASWKVKSSLDKDTGREFRPYIEANWIHNTHEFGVKMSGDNQLLSGSRNQGEIKTGIEGVITQNLSVNGGVAYQAGGHG 1273
                          730
                   ....*....|....
gi 1438035728 2305 YNDTSAMIGIKYNF 2318
Cdd:NF033176  1274 SNAISGALGIKYSF 1287
PL2_Passenger_AT cd01344
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of ...
1771-1981 1.52e-42

Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of the nonprotease autotransporters, Ag43, AIDA-1 and IcsA, as well as, the less characterized ShdA, MisL, and BapA autotransporters.


Pssm-ID: 238654 [Multi-domain]  Cd Length: 188  Bit Score: 154.76  E-value: 1.52e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1771 GNVTLSDSAQWTGATDINAGGLTLgsaDNAFTLashqvnigkDGRLSGFGGVAGNMANQGTLLIGDDVSAArravsspvs 1850
Cdd:cd01344      1 GTITGNGGWKLGGDLTLGGGALTL---TTSLTL---------TGTLLTGGAGTLTLDSTSTWNITGTSTLN--------- 59
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1851 ftvGGNLTNSGDIWTGSkGKDAGNQLVVNGNYQGDGGHLHLNTALNDDNSVTDKLIVKGNTSGTTGVSVTNAGGSGAQTI 1930
Cdd:cd01344     60 ---VGNLTNAGTIDLGN-GSPAGGTLTITGNYTGNGGTLRLNTVLGDDDSPTDRLVIDGDASGTTRVAVNNAGGSGATTG 135
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1438035728 1931 NGIEVIHVDG-QSDGEFTQDGRIVAGAYDYSLARGQGD-NNGNWYLTSHKTDP 1981
Cdd:cd01344    136 NGIEVVEVGGtSSNGAFSLAGRVVAGAYEYRLYRGGVSgNDGNWYLRSELAPP 188
Autotransporter pfam03797
Autotransporter beta-domain; Secretion of protein products occurs by a number of different ...
2037-2297 2.35e-32

Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C terminus of the proteins it occurs in. The N terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.


Pssm-ID: 461054 [Multi-domain]  Cd Length: 255  Bit Score: 127.89  E-value: 2.35e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2037 MWMRQAGGHNAWRDSSGQLKTQSNRYVMQVGGDVARwsgdgLDRWHLGVMAGYGHNSSNTRssstGYRSDGSVNGYSAGV 2116
Cdd:pfam03797    1 VWARGFGGRGKQDGDGGAAGYDADTGGLQVGADYRL-----GDNLRLGVAFGYSRSDADVD----GRGGSGDSDSYSLGL 71
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2117 YATWYANDethqGAYLDSWAQYSWFNNSVK-------GQDIQSESYKSKGITGSLELGYTHKLGefagskgskNEWFIQP 2189
Cdd:pfam03797   72 YGTYYGDG----GWYLDGGLGYGWHDNDTRrsvdlggFSETAKGDYDGNGFGASLEAGYRFALG---------GGWTLEP 138
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2190 QAQAIWMGVEADDHRESNG---TRISGEGDGNVQTRLGVRTFLKGHSAidegkAREFQPFVEVNWLHNTRD--------- 2257
Cdd:pfam03797  139 FAGLAYVRLRLDGFTESGGaaaLSVDSQSYDSLTGRLGLRLSYTFDLG-----GGTLTPYARLGWRHEFGDddpvttaaf 213
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|..
gi 1438035728 2258 --FGTKMDGVSIRQEGARNLGEIKTGVEGQINPQLNVWGNVG 2297
Cdd:pfam03797  214 agLSGAGSFTVAGADLARDSLELGAGLSAQLSDNLSLYANYD 255
Autotransporter smart00869
Autotransporter beta-domain; Secretion of protein products occurs by a number of different ...
2042-2307 2.18e-26

Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type IV pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different peptidase is used and in some cases no cleavage occurs.


Pssm-ID: 214872 [Multi-domain]  Cd Length: 268  Bit Score: 110.74  E-value: 2.18e-26
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  2042 AGGHNAWRDSSGQLKTQSNRYVMQVGGDVARWSGDgldRWHLGVMAGYGHNSSNTRSSstGYRSDGSVNGYSAGVYATWY 2121
Cdd:smart00869    6 GFLRQDSSGSGGSAGFDYDSYGLQLGADYRLSDNG---NLSLGFAAGYGNSKVDFSGN--KGSGKGDVDSYGLGLYAGYS 80
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  2122 ANDethqGAYLDSWAQYSWFNNSVK------GQDIQSESYKSKGITGSLELGYTHKLGEFagskgskneWFIQPQAQAIW 2195
Cdd:smart00869   81 LGN----GLYLDAQLGYGRSDNDTKrkvtlgGAGRAKGSYDGTGYGASLEAGYRFYLGGG---------LTLTPFAGLAY 147
                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  2196 MGVEADDHRESNGT----RISGEGDGNVQTRLGVRTFLkghsAIDEGKAREFQPFVEVNWLHNTRDFGTK---------M 2262
Cdd:smart00869  148 SRVRQDGFTESGGGafglSVDSQSLDSLSLPLGLRLEY----RLALGDGATLTPYLRLAYVHDFYDDNPVvtasllgsgA 223
                           250       260       270       280
                    ....*....|....*....|....*....|....*....|....*
gi 1438035728  2263 DGVSIRQEGARNLGEIKTGVEGQINPQLNVWGNVGVQLGDKGYND 2307
Cdd:smart00869  224 SFTTSGTDLDRNAAELGLGLSAKLSNGLSLSLNYDGEFGGSSRSH 268
ESPR pfam13018
Extended Signal Peptide of Type V secretion system; This conserved domain is called ESPR for ...
1-50 5.17e-11

Extended Signal Peptide of Type V secretion system; This conserved domain is called ESPR for Extended Signal Peptide Region. It is present at the N-terminus of the signal peptides of proteins belonging to the Type V secretion systems, including the autotransporters (T5aSS), TpsA exoproteins of the two-partner system (T5bSS) and trimeric autotransporters (TAAs). So far, the ESPR is present only in Gram-negative bacterial proteins originating from the classes Beta- and Gamma-proteobacteria. ESPR severely impairs inner membrane translocation, suggesting that it adopts a particular conformation or it interacts with a cytoplasmic or inner membrane co-factor, prior to exportation. Deletion of ESPR causes mis-folding of the TAAs passenger domain in the periplasm, substantially impairing its translocation across the outer membrane.


Pssm-ID: 463773 [Multi-domain]  Cd Length: 50  Bit Score: 59.47  E-value: 5.17e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 1438035728    1 MNKVFKVIWNSRLNIFVVASELARGYCKSTAGNTSFGSLLKYPLMSALAV 50
Cdd:pfam13018    1 MNKIYRVIWNRARGAWVVVSELAKSKGKSSSSSSGSAAALAALLLLLLAA 50
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
554-983 2.70e-07

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 56.11  E-value: 2.70e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  554 GNGTYNGSDTSQIIIGSKVQNATAIDVGGNATLDQKGSININGAVTGESVSSNIGIIARAGTqaakvvhdgiINLNGLNS 633
Cdd:COG3468      2 ASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGA----------GGGGGGAG 71
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  634 TGIQVLENGQITSSGTININGGLDPVTHYANYGIYVQGEKALAILSGTVNLSGDGAIGVHARDKGEIDVTENGTVNFKDG 713
Cdd:COG3468     72 SGGGLAGAGSGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGG 151
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  714 VNQTGYYIFGAGSTIKNAASSVQDAsTQNATLYRVDGGASFYGSADSSAQLNASGDGATIIRTTGAGSHFDSGKLALSVT 793
Cdd:COG3468    152 TGAAAAGGGTGSGGGGSGGGGGAGG-GGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGS 230
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  794 GTGATGIRIEGGATGEITSDAVIVRVAGKDTTAGIVDGNYYNLDGSVNDAQKGDSVLTSYAVLETANTADGAFGYIARNG 873
Cdd:COG3468    231 GGNTGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGG 310
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  874 GRLIHEGSIDFTADNSTGILVDGGILENHSDVTVNGVAVNIQGANSEVTNSGVVTATDGQAAYLVGNNATLALNGNGETR 953
Cdd:COG3468    311 GNGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDG 390
                          410       420       430
                   ....*....|....*....|....*....|
gi 1438035728  954 AAGTAHGILLDTGAKGLTVDGATITMDSAG 983
Cdd:COG3468    391 VGTGLTTGGTGNNGGGGVGGGGGGGLTLTG 420
auto_BafA_Cterm NF040482
BafA family autotransporter C-terminal domain; BafA from both Bartonella henselae and ...
1888-2318 2.74e-07

BafA family autotransporter C-terminal domain; BafA from both Bartonella henselae and Bartonella quintana, and possibly all Bartonella BafA, are mitogenic autotransporter virulence factors that help induce vasoproliferative lesions during infection. This HMM represents the more conserved C-terminal portion only, as the passenger region is more highly variable in length and sequence.


Pssm-ID: 468508 [Multi-domain]  Cd Length: 617  Bit Score: 55.80  E-value: 2.74e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1888 HLHLNTALNDDNSvtDKLIVKgNTSGTTGVSVTNAG----GSGAQTINGIevihVDGQSDGEFTQDGR-------IVAGA 1956
Cdd:NF040482   199 HFKFNTSIAGNRG--DYLFIE-NGKGNHTISVADSGveitDPFSNKRDLI----TDQSGGANFTLTNLsgekinaVDGGT 271
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1957 YDYSLARGQGDNNGNWYLTSHKTDPNPGPGPKPEPDIRPEPGSWTANLAAANTLFVTRLHDRLGETQYIDA----LTGEK 2032
Cdd:NF040482   272 YMYGLKQRKDENGKIWYLSADRISGQESSSPDPSEPLSVSDFLTTPSTDAVLSMAVAPGLIFNNELQTVRTgrgiLDRNK 351
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2033 KVTSMWM-------RQAGGHNawrdssgQLKTQSNRYVMQVggdvarwsgDGLDRWHLG--VMAGYGHNSSNTRSSSTGY 2103
Cdd:NF040482   352 KNTALWTyaikskeRIATGHT-------HFKLEQTGIVLGA---------DGLSELTHGdlYIGGFGSYDQARIAHARGG 415
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2104 RSDgsVNGYSAGVYATWYandeTHQGAYLDSWAQYSWFNNSVK-----GQDIQSEsYKSKGITGSLELGYTHKLGefags 2178
Cdd:NF040482   416 VSD--INTYSIGAYATYF----DHRGWYLDGILKYNYYQNNLKavstnGLAIQGD-YNQWAIGTSFEAGYRFETA----- 483
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2179 kgsKNEWfIQPQAQAIWMGVEADDHRESNGTRisgeGDGN----VQTRLGVRTflkGHSAIDEGKArEFQPFVEVNWLHN 2254
Cdd:NF040482   484 ---QNTW-MQPYGQLTWLQVEGKKIKLSNGMT----GDISpstsLRSEVGLSA---GHEFIVGAET-SLTAYITAAWLRE 551
                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1438035728 2255 TRD-----------FGTKMDGvsirqegarNLGEIKTGVEGQINPQLNVWGNVGVQLGDKGYNDTSAMIGIKYNF 2318
Cdd:NF040482   552 NIDnnhttinkqhkFITDLSG---------NAGKLGIGLNSFVSDKLTLYAEAHYLKGHKIKQSLQGILGLRYSF 617
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
187-602 9.99e-03

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 41.09  E-value: 9.99e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  187 VGAGASLDVDVGQKTGNWVGAADNQFNVIMKSSVNTQNLSSAYHVTNGGSLNYQSKTVVQLGNSDNNIKDASNALAWMTA 266
Cdd:COG3468     21 GGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNSTGGGGGNSGTGG 100
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  267 ADFVGEFDSVIGKQNITNIDEFKAYNDALIQALQDGQIQLTEAQYADELNKARDTSLHGIFADTGSIAADDAIRAFVNRD 346
Cdd:COG3468    101 TGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGGGGSGGGGGAGGGGGG 180
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  347 AVSYIHGVGSGTNVVIDKDANIQLVGSDATVVNLeNGARLTNNGTLGTAGNTYRGAYIIAARNTSFVDNNGVIDAGTNPE 426
Cdd:COG3468    181 GAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGG-GGGGGGAGGATGGAGSGGNTGGGVGGGGGSAGGTGGGGLTGGGAA 259
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  427 MADFFSSGAAGVAQGAHTAILANGSSVINNNSSGVINVAARGNYYGNTGVLMSGNATLNNDGAINIAASNEANSILGNGA 506
Cdd:COG3468    260 GTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGGGSGGGGGGGGGGGGG 339
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  507 NIGVVTQQNTTFNNRGTLYIGRLAQRAPDDANTDIAIKQQSIGVHLYGNGTYNGSDTSQIIIGSKVQNATAIDVGGNATL 586
Cdd:COG3468    340 GTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGNNGGGGVGGGGGGGLTLT 419
                          410
                   ....*....|....*.
gi 1438035728  587 DqkGSININGAVTGES 602
Cdd:COG3468    420 G--GTLTVNGNYTGNN 433
 
Name Accession Description Interval E-value
PRK14849 PRK14849
autotransporter barrel domain-containing lipoprotein;
894-2318 0e+00

autotransporter barrel domain-containing lipoprotein;


Pssm-ID: 184851 [Multi-domain]  Cd Length: 1806  Bit Score: 737.70  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  894 VDGGILENHSDVTVNGvAVNIQGANSEVTNSGVVTATDGQAAYLVGNNATLALNGNGETRAAGTAHG-ILLDTGAKGLTV 972
Cdd:PRK14849   367 VDSGIITAGMKETGTG-NITVKDKNSVITNLGTNLGYDGHGEMNISNEGLVVSNGGSSLGYGETGVGnVSITTGGMWEVN 445
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  973 DGATITMDSAGSGNAieNKAAISGIQLKNTTINVGNGVGVHTGASMAQTNS-GTININGSGTGILFENVADGSdtdqTLD 1051
Cdd:PRK14849   446 KNVYTTIGVAGVGNL--NISDGGKFVSQNITFLGDKASGIGTLNLMDATSSfDTVGINVGNFGSGIVNVSNGA----TLN 519
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1052 MSDSRDLVINVNGAQGNGIITRASTDLKTGAS------VNVLdSDGKSALVVQGTTKNVEQSGKLTSVSDKAAVVDLNNG 1125
Cdd:PRK14849   520 STGYGFIGGNASGKGIVNISTDSLWNLKTSSTnaqllqVGVL-GKGELNITTGGIVKARDTQIALNDKSKGDVRVDGQNS 598
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1126 VLESFinkGDILALDASHTALEMNSGNgitfTNASGANI--------VGQVNLLNGDNTVILESG--STATDITSGSGKD 1195
Cdd:PRK14849   599 LLETF---NMYVGTSGTGTLTLTNNGT----LNVEGGEVylgvfepaVGTLNIGAAHGEAAADAGfiTNATKVEFGLGEG 671
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1196 NFILKNISENESGSLFTSLNGGSGDDTLQLENSSYTLTRADaiNGMEHIALANNSVFTLD----NVALGLGDDELDGAGT 1271
Cdd:PRK14849   672 VFVFNHTNNSDAGYQVDMLITGDDKDGKVIHDAGHTVFNAG--NTYSGKTLVNDGLLTIAshtaDGVTGMGSSEVTIASP 749
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1272 GyTIDGSSqlSIKNTADVTFKSHLAGTGVVAVDTANNHFNFDANNAADG-FAGTLALTNSRFELDGLNTQALSNATLQAG 1350
Cdd:PRK14849   750 G-TLDILA--STNSAGDYTLTNALKGDGLMRVQLSSSDKMFGFTHATGTeFAGVAQLKDSTFTLERDNTAALTHAMLQSD 826
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1351 NGSITHVGSGEQNIGGLDFKGGTVQFDGVTPGNPTALG-----TIHAGAMD---------LSGRGTVQVDSGTVSNDrPQ 1416
Cdd:PRK14849   827 SENTTSVKVGEQSIGGLAMNGGTLIFDTDIPAATLAEGyisvdTLVVGAGDytwkgrnyqVNGTGDVLIDVPKPWND-PM 905
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1417 AD---THRPILEQDDAQALIKLATSDTAVqGGAGNLVLKDKDGNVISDSITADIAQNGVVVAKGTYDYRLTGGDSDdGLY 1493
Cdd:PRK14849   906 ANnplTTLNLLEHDDSHVGVQLVKAQTVI-GSGGSLTLRDLQGDEVEADKTLHIAQNGTVVAEGDYGFRLTTAPGD-GLY 983
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1494 VSYGLTQVDLLGKDADALIlDANGKSGNAADLSARVTGSGDLAFDSQKgqTVTLSNMDNDYSGVTDVRSGNLAMLNDNVL 1573
Cdd:PRK14849   984 VNYGLKALNIHGGQKLTLA-EHGGAYGATADMSAKIGGEGDLAINTVR--QVSLSNGQNDYQGATYVQMGTLRTDADGAL 1060
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1574 GNTRELKLAGDTGFDMRGHSQTIGKLTAESGSLTDLNGGHLTLTNGGEASGVLTGDGELTVAGGTLNVSGANTGLKATTT 1653
Cdd:PRK14849  1061 GNTRELNISNAAIVDLNGSTQTVETFTGQMGSTVLFKEGALTVNKGGISQGELTGGGNLNVTGGTLAIEGLNARYNALTS 1140
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1654 IAQGATAVLDNTLGLGTGDIVAAGLLNLSNATGVLYNSISDAGKVALDA-SDVVLAGNNSHFAGTFDIDNDSTLTASSAQ 1732
Cdd:PRK14849  1141 ISPNAEVSLDNTQGLGRGNIANDGLLTLKNVTGELRNSISGKGIVSATArTDVELDGDNSRFVGQFNIDTGSALSVNEQK 1220
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1733 QLGTSAIQNAGKFVLNTHENWSLENGVTGSGSVVKNGSGNVTLS-DSAQWTGATDINAGGLTLGSaDNAFTLASHQVNIG 1811
Cdd:PRK14849  1221 NLGDASVINNGLLTISTERSWAMTHSISGSGDVTKLGTGILTLNnDSAAYQGTTDIVGGEIAFGS-DSAINMASQHINIH 1299
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1812 KDGRLSGFGGVAGNManqgTLLIGDDVSAARRavsspvsfTVGGNLTNSGDIWTGSKGKDAGNQLVVNGNYQGDGGHLHL 1891
Cdd:PRK14849  1300 NSGVMSGNVTTAGDV----NVMPGGTLRVAKT--------TIGGNLENGGTVQMNSEGGKPGNVLTVNGNYTGNNGLMTF 1367
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1892 NTALNDDNSVTDKLIVKGNTSGTTGVSVTNAGGSGAQTINGIEVIHVDGQSDGEFT-QDGRIVAGAYDYSLARGQGDNNG 1970
Cdd:PRK14849  1368 NATLGGDNSPTDKMNVKGDTQGNTRVRVDNIGGVGAQTVNGIELIEVGGNSAGNFAlTTGTVEAGAYVYTLAKGKGNDEK 1447
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1971 NWYLTSHKTDPNPGPGPKP-------EPD----IRPEPGSWTANLAAANTLFVTRLHDRLGETQYIDALTGEKKVTSMWM 2039
Cdd:PRK14849  1448 NWYLTSKWDGVTPPDTPDPinnppvvDPEgpsvYRPEAGSYISNIAAANSLFSHRLHDRLGEPQYIDSLHSQGSASSMWM 1527
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2040 RQAGGHNAWRDSSGQLKTQSNRYVMQVGGDVARWSGDGLDRWHLGVMAGYGHNSSNTRSSSTGYRSDGSVNGYSAGVYAT 2119
Cdd:PRK14849  1528 RHVGGHERSRAGDGQLNTQANRYVLQLGGDLAQWSSNAQDRWHLGVMAGYANQHSNTQSNRVGYKSDGRISGYSAGLYAT 1607
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2120 WYANDETHQGAYLDSWAQYSWFNNSVKGQDIQSESYKSKGITGSLELGYTHKLGEFAGSKGSKNEWFIQPQAQAIWMGVE 2199
Cdd:PRK14849  1608 WYQNDANKTGAYVDSWALYNWFDNSVSSDNRSADDYDSRGVTASVEGGYTFEAGTFSGSEGTLNTWYVQPQAQITWMGVK 1687
                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2200 ADDHRESNGTRISGEGDGNVQTRLGVRTFLKGHSAIDEGKAREFQPFVEVNWLHNTRDFGTKMDGVSIRQEGARNLGEIK 2279
Cdd:PRK14849  1688 DSDHTRKDGTRIETEGDGNVQTRLGVKTYLNSHHQRDDGKQREFQPYIEANWINNSKVYAVKMNGQTVGREGARNLGEVR 1767
                         1450      1460      1470
                   ....*....|....*....|....*....|....*....
gi 1438035728 2280 TGVEGQINPQLNVWGNVGVQLGDKGYNDTSAMIGIKYNF 2318
Cdd:PRK14849  1768 TGVEAKVNNNLSLWGNVGVQLGDKGYSDTQGMLGVKYSW 1806
PRK15313 PRK15313
intestinal colonization autotransporter adhesin MisL;
1569-2318 1.49e-144

intestinal colonization autotransporter adhesin MisL;


Pssm-ID: 237940 [Multi-domain]  Cd Length: 955  Bit Score: 476.98  E-value: 1.49e-144
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1569 NDNVLGNTRELKLAGDTGFDMRghsqtigklTAESGSLTDLNGGHLTLTNGGEASGVLTGDGELTVAG--GTLNVSGANT 1646
Cdd:PRK15313   217 NTIVVGNRAHIVTTGDSSEGLR---------TGQSGSLIRLGDDATIETSGASSTGIYAASSSRTELGnnATITVNGASA 287
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1647 GlkatttiaqgATAVLDNTLGLGTGDIVAagllnLSNATGVLYNSISDAGKVALDASDVVLAGNNshfAGTFDIDNDSTL 1726
Cdd:PRK15313   288 H----------AVYATNATVNLGENATIS-----VNSASKAASYSKAPAGLYALSRGAINLAGGA---AITMAGDNSSES 349
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1727 TASSAQQLGTSAIQNAGKFVLNTheNWSLENGVTGSGSV-VKNGSGNVTLSDSAQWTGATDINAggltlgsadnaftlas 1805
Cdd:PRK15313   350 YAISTETGGIVDGSSGGRFVIDG--DIRAAGATAASGTLpQQNSTIKLNMTDNSRWDGASYITS---------------- 411
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1806 hqvnigkdgrlsgfggvagnmANQGTLLIGDDVSAARRAVSSPVSFTvGGNLTNSGDIWTGSKGKDAGNQLVVNGNYQGD 1885
Cdd:PRK15313   412 ---------------------ATAGTGVISVQMSDATWNMTSSSTLT-DLTLNSGATINFSHEDGEPWQTLTINEDYVGN 469
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1886 GGHLHLNTALNDDNSVTDKLIVKGNTSGTTGVSVTNAGGSGAQTINGIEVIHVDGQSDGEFTQDGRIVAGAYDYSLARgq 1965
Cdd:PRK15313   470 GGKLVFNTVLNDDDSETDRLQVLGNTSGNTFVAVNNIGGAGAQTIEGIEIVNVAGNSNGTFEKASRIVAGAYDYNVVQ-- 547
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1966 gdNNGNWYLTSH-----------------------KTDPNP--------------GPGP-KPEP---------------- 1991
Cdd:PRK15313   548 --KGKNWYLTSYiepdepiipdpvdpvipdpvipdPVDPDPvdpvipdpvipdpvDPDPvDPEPvdpvipdptipdigqs 625
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1992 --------DIRPEPGSWTANLAAANTLFVTRLHDRLGETQYIDALTGEKKVTSMWMRQAGGHNAWRDSSGQLKTQSNRYV 2063
Cdd:PRK15313   626 dtppitehQFRPEVGSYLANNYAANTLFMTRLHDRLGETQYTDMLTGEKKVTSLWMRNVGAHTRFNDGSGQLKTRINSYV 705
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2064 MQVGGDVARWSGDGLDRWHLGVMAGYGHNSSNTRSSSTGYRSDGSVNGYSAGVYATWYANDETHQGAYLDSWAQYSWFNN 2143
Cdd:PRK15313   706 LQLGGDLAQWSTDGLDRWHIGAMAGYANSQNRTLSSVSDYHSRGQVTGYSVGLYGTWYANNIDRSGAYVDTWMLYNWFDN 785
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2144 SVKGQDIQSESYKSKGITGSLELGYTHKLGEFAgskgsKNEWFIQPQAQAIWMGVEADDHRESNGTRISGEGDGNVQTRL 2223
Cdd:PRK15313   786 KVMGQDQAAEKYKSKGITASVEAGYSFRLGESA-----HQSYWLQPKAQVVWMGVQADDNREANGTLVKDDTAGNLLTRM 860
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2224 GVRTFLKGHSAIDEGKAREFQPFVEVNWLHNTRDFGTKMDGVSIRQEGARNLGEIKTGVEGQINPQLNVWGNVGVQLGDK 2303
Cdd:PRK15313   861 GVKAYINGHNAIDDNKSREFQPFVEANWIHNTQPASVKMDDVSSDMRGTKNIGELKVGIEGQITPRLNVWGNVAQQVGDQ 940
                          810
                   ....*....|....*
gi 1438035728 2304 GYNDTSAMIGIKYNF 2318
Cdd:PRK15313   941 GYSNTQGLLGVKYSF 955
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
1456-2318 2.25e-109

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 371.20  E-value: 2.25e-109
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1456 GNVISDSITADIAQNGVVVAKGTYDYRLTGGDSDDGLYVSYGLTQVDLLGKDADALILDANGKSGNAADLSARVTGSGDL 1535
Cdd:COG3468      7 GGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGG 86
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1536 AFDSQKGQTVTLSNMDNDYSGVTDVRSGNLAMLNDNVLGNTRELKLAGDTGFDMRGHSQTIGKLTAESGSLTDLNGGHLT 1615
Cdd:COG3468     87 NSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGGG 166
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1616 LTNGGEASGVLTGDGELTVAGGTLNVSGANTGLKATTTIAQGATAVLDNTLGLGTGDIVAAGLLNLSNATGVLYNSISDA 1695
Cdd:COG3468    167 GSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGSAG 246
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1696 GKVALDASDVVLAGNNSHFAGTFDIDNDSTLTASSAQQLGTSAIQNAGKFVLNTHENWSLENGVTGSGSVVKNGSGNVTL 1775
Cdd:COG3468    247 GTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGGGS 326
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1776 SDSAQWTGATDINAGGLTLGSADNAFTLAShqvnIGKDGRLSGFGGVAGNMANQGTLLIGDDVSAARRAVSSPVSFTVGG 1855
Cdd:COG3468    327 GGGGGGGGGGGGGGTTLNGAGSAGGGTGAA----LAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGN 402
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1856 NLTNSGDIWTGSKGKDAGNQLVVNGNYQGDGGHLHLNTALNDDNSVTDKLIVKGNTSGTTGVSVTNAGGSGAQTINGIEV 1935
Cdd:COG3468    403 NGGGGVGGGGGGGLTLTGGTLTVNGNYTGNNGTLVLNTVLGDDNSPTDRLVVNGNTSGTTGVRVNNAGGLGAQTVNGIEV 482
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1936 IHVDGQSDGEFTQDGRIVAGAYDYSLARGQ-GDNNGNWYLTSHKTDPNPgpgpkPEPDIRPEPGSWTANLAAANTLFVT- 2013
Cdd:COG3468    483 VEVNGASDGAFTLGGRVVAGAYEYTLYQGGsGGDDGNWYLRSTLTPPDP-----PTPVYRPEVPSYLANPAAANGLFELg 557
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2014 RLHDRLGETQYIDalTGEKKVTSMWMRQAGGHNAWRDSSGQLKTQSNRYVMQVGGDVARWSGDGlDRWHLGVMAGYGHNS 2093
Cdd:COG3468    558 TLHDRLGERRYTD--TGESDNSGAWLRVEGGHNRSRDSSGQLDYDSNRYGLQLGGDLLQWEDGG-GRLHVGVMAGYGNGD 634
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2094 SNTRSSSTgYRSDGSVNGYSAGVYATWYANdethQGAYLDSWAQYSWFNNSVKGQDIQ--SESYKSKGITGSLELGYTHK 2171
Cdd:COG3468    635 SDVRSRAT-GTGKGDVDGYSLGLYGTWYGN----NGFYVDGVLQYSWFDNDVSSDDLGgvTGSYDGNGYSASLEAGYPFK 709
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2172 LGEfagskgsknEWFIQPQAQAIWMGVEADDHRESNGTRISGEGDGNVQTRLGVRTFLKGHSaideGKAREFQPFVEVNW 2251
Cdd:COG3468    710 LGE---------GWSLEPQAQLIYQGVDFDDFTDSNGTRVSGDDGDSLQGRLGLRLGYEFHW----DDGRALQPYLEANW 776
                          810       820       830       840       850       860       870
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2252 LHNT-RDFGTKMDGVSIRQEGARNLGEIKTGVEGQINPQLNVWGNVGVQLGDKGYN--DTSAMIGIKYNF 2318
Cdd:COG3468    777 LHEFlGDNSVTVNGVSFSQDGSGTWGELGLGVTGQLNKNLSLYGDVGYQTGLDGYDssDTSGNLGVRYSF 846
autotrans_barl TIGR01414
outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, ...
1869-2318 1.70e-102

outer membrane autotransporter barrel domain; A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis]


Pssm-ID: 273608 [Multi-domain]  Cd Length: 431  Bit Score: 336.66  E-value: 1.70e-102
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1869 GKDAGNQLVVNGNYQGDGGhLHLNTALNDDNSVTDKLIVKGNTSGTTGVSVTNAGGSGAQTINGIEVIHVDGQSDGEFTQ 1948
Cdd:TIGR01414    1 PGGAFNTLTVNGLYTGNGG-FVMNTDLGGDNSQTDRLVVNGNASGTTGVVVNNIGGEGAQTGDGITLVTVNGGSDAAFTL 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1949 D-GRIVAGAYDYSLARGQGDNNGNWYLTSHKTDPnPGPGPKPEPDIRPEPGSWTANLAAANTLF-VTRLHDRLGETQYid 2026
Cdd:TIGR01414   80 AnGKVDAGAYTYTLYKNGTEDNNNWYLTSSLPDL-TPPGQQLSPTYRAEAGSYAANANAALFLAeLDTLRQRMGDLRS-- 156
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2027 alTGEKKVTSMWMRQAGGHNAWRDSSGQLKTQSNRYVMQVGGDVARWsGDGLDRWHLGVMAGYGHNSSNTRSSStgYRSD 2106
Cdd:TIGR01414  157 --AARDAGNGVWARIFGGDNHLDGDAGAAGYDQNTTGVQLGGDILLA-GNADGDLHVGLMAGYAKADIKTRSYK--YGGK 231
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2107 GSVNGYSAGVYATWYANDethqGAYLDSWAQYSWFNNSVKGQDIQ---SESYKSKGITGSLELGYTHKLGEfagskgskN 2183
Cdd:TIGR01414  232 GKVDGYGLGLYGTWLQDS----GAYVDGVLQYSRFRNDVSSTGSNgkvSGKYNSNGFTASLEAGYRYNLGG--------N 299
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2184 EWFIQPQAQAIWMGVEADDHRESNGTRISGEGDGNVQTRLGVRTflkgHSAIDEGKAREFQPFVEVNWLHN-TRDFGTKM 2262
Cdd:TIGR01414  300 GWYVEPQAQLSYFGVSGDDYKESNGTRVLGGGGDSLQGRLGLRV----GYQFDLGTGRAVKPYLKANVLHEfKGGTGVRV 375
                          410       420       430       440       450
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1438035728 2263 DGVSIRQEGARNLGEIKTGVEGQINPQLNVWGNVGVQLGDKGYNDTSAMIGIKYNF 2318
Cdd:TIGR01414  376 NGVTIRNDFSGTRAEYGVGVNAKIKDNLSLYADVDYQKGGKKYTDNQGNLGVRYSF 431
auto_AIDA-I NF033176
autotransporter adhesin AIDA-I;
1610-2318 1.56e-96

autotransporter adhesin AIDA-I;


Pssm-ID: 380183 [Multi-domain]  Cd Length: 1287  Bit Score: 343.18  E-value: 1.56e-96
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1610 NGGHLTLTNGGEASGVLTGDG--ELTVAGGtlNVSGANTGLKATTTIAQGATAvLDNTLGLGTGDIVAAG-LLNLSNATG 1686
Cdd:NF033176   570 SGGLQAVSSGGSASATVINEGgsQFVYEGG--NVTGTVIKNGGAIRVDSGASA-LNIALSSGGNLFTSTGaTVTGTNHYG 646
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1687 VLYNSISDAGKVALDASDVVLAGNNS-------HFAGTFDIDN----DSTLTASSAQQLGTSAIQNAGKFVLNTHENWSL 1755
Cdd:NF033176   647 SFSVSQNHASNVVLENGGLLAVTSGStatdttvNSAGRLRIDEggalDGTTTINADGIVAGAKIKNDGDFILNLAGDYDF 726
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1756 ENGVTGSGSVVKNGSGNVTLSDSAQWTGATDINAGGLTLGSAD-NAFTLASHQVNIGkdgrLSGFGGVAGNMANQGTLLI 1834
Cdd:NF033176   727 NTELSGNGALVKDNSGVMSYEGTLTQARGVNVKNGGIILGSAVvNADMAVSQNAYIN----ISDQATINGSVNNKGSVVI 802
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1835 GDDVSAARRAVSSPVSF--------TVGGNLTNSGDIWTGSKGKDAGNQLVVNGNYQGDGGHLHLNTALNDDNSVTDKLI 1906
Cdd:NF033176   803 NNSIINGNITNDADLSFgtakllsaTVNGSLVNNKNIILNPTKESAGNTLTVSNYTGTPGSVISLGGVLEGDNSLTDRLV 882
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1907 VKGNTSGTTGVSVTNAGGSGAQTINGIEVIHVDGQSDGEFTQDGRIVAGAYDYSLARGQ--GDNNGNWYLTSHKTDPNpg 1984
Cdd:NF033176   883 VKGNTSGQSDIVYVNEGGSGGQTIEGINIISVEGNSDAEFSLKNRVVAGAYDYTLQKGNvsGTDKKGWYLTSHLPTSD-- 960
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1985 pgpkpEPDIRPEPGSWTANLAAANTLFVTRLHDRLGETQYIDALTGEKkvTSMWMRQAGGHNAWRDSSGQLKTQSNRYVM 2064
Cdd:NF033176   961 -----TRQYRPENGSYATNMALANSLFLMDLNERKQFSAVNDNTQPES--ASVWMKITGGRTSGKLSDGQNKTTTNQFIN 1033
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2065 QVGGDVARWSGDGLDRWHLGVMAGYGHNSSNTRSSSTGYRSDGSVNGYSAGVYATWYANDETHQGAYLDSWAQYSWFNNS 2144
Cdd:NF033176  1034 QLGGDIYKYHAEKLGDFTLGIMGGYANAKGKTINHTSKKGARNTLDGYSAGLYGTWYQNGANATGLFAETWMQYNWFNAS 1113
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2145 VKGQDIQSESYKSKGITGSLELGYTHKLGEFAGSKGSKNEWFIQPQAQAIWMGVEADDHRESNGTRISGEGDGNVQTRLG 2224
Cdd:NF033176  1114 VKGDGLEEEKYNLNGLTASVGGGYNLNVHTWTSPEGIKGEFWLQPHLQAVWMGVTPDTHQEDNGTVVQGTGKNNLQTKAG 1193
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2225 VRTFLKGHSAIDEGKAREFQPFVEVNWLHNTRDFGTKMDGVSIRQEGARNLGEIKTGVEGQINPQLNVWGNVGVQLGDKG 2304
Cdd:NF033176  1194 IRASWKVKSSLDKDTGREFRPYIEANWIHNTHEFGVKMSGDNQLLSGSRNQGEIKTGIEGVITQNLSVNGGVAYQAGGHG 1273
                          730
                   ....*....|....
gi 1438035728 2305 YNDTSAMIGIKYNF 2318
Cdd:NF033176  1274 SNAISGALGIKYSF 1287
PRK15319 PRK15319
fibronectin-binding autotransporter adhesin ShdA;
925-2318 1.25e-67

fibronectin-binding autotransporter adhesin ShdA;


Pssm-ID: 185219 [Multi-domain]  Cd Length: 2039  Bit Score: 255.01  E-value: 1.25e-67
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  925 GVVTATDGQAAYLVGNNATLALNGNGETRAAGTAHGILLDTG----AKGLTVDGATITMDSA---GSGNAIEN-KAAISG 996
Cdd:PRK15319   661 GTGDVTIAESATLALSQGTLDNNVTGEGQIVKSGSDELIVTGdnnySGGTTISGGTLTADHAdslGSGDVDNSgVLKVGE 740
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  997 IQLKNTtinvgngvgVHTGASMAQTNSGTININGSGTGILFENVADGSDTDQTLDMSDSRDL----VINVNGAQGNGIIT 1072
Cdd:PRK15319   741 GELENI---------LSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTLTADHADSLGSGDIdnsgVLKVGEGDLENTLS 811
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1073 RASTDLKTGASVNVLDSDGK---SALVVQGTTKNVEQSGKLTSVSDKAAVVDLNNGVLESFINKGDILaLDASHTALEMN 1149
Cdd:PRK15319   812 GSGSLVKTGTGELTLSGGNDysgGTTIIGGTLTADHADSLGSGDIDNSGVLQVGEGELKNTLFGSGSL-VKTGTGELTLN 890
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1150 SGNGITftnaSGANIVGQVnlLNGDNTVILESGSTATDITSGSGKDNfiLKNiSENESGSLFTSlngGSGDDTLQLENSS 1229
Cdd:PRK15319   891 GDNDYS----GGTTIDDGV--LIADHADSLGTGAVANSGVLQVGEGE--LKN-TLSGSGSLVKT---GTGELTLSGDNSY 958
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1230 YTLTR-------ADAINGMEHIALANNSVftldnvaLGLGDDELDGagtgyTIDGSSQLSIKNTADVTF---KSHLAGTG 1299
Cdd:PRK15319   959 SGGTTiiggtliADHADSLGTGAVANSGV-------LQVGEGELEN-----TLSGSGSLVKTGTGELTLggdNSYSGDTT 1026
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1300 VVAVDTANNHFNFDANNAADGfAGTLAL-TNSRFELDGLNTQalSNATLQAGNGSITHVGSGEQNIGG-LDFKGGTVQFD 1377
Cdd:PRK15319  1027 IADGTLIAANVNALGSGNIDN-SGTLMLdANGAFELANITTH--SGATTALAAGSTLDAGQLTQEDGStLSIDLGAATDD 1103
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1378 GVTPGNPTALGtihaGAMDLSGRGTVQVDSGTVSNDRPQADTHRPILEQDDAQALIKLATSDTAVQGGAGNLVLKDKDGN 1457
Cdd:PRK15319  1104 AVITADSVTLG----GTLNVTGIGSVTDSWTPEAYTYTLIDSDSAITSDFDDLTIAGMNREDVDFLTIDGKVDEADNTHY 1179
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1458 VISDSIT--ADiAQNGVVVAKGTYdyrlTGGDSDDGLYVSYGLTQVDllgkdadalildangksgNAADLSARVTGSgdl 1535
Cdd:PRK15319  1180 DLTASLSwyAD-RDNATTDAHGTF----TLSDPDGSFNVAATLTDVD------------------DTLDPGSRWDGK--- 1233
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1536 AFDSQKGQTVTLSNmDNDYSGVTDVRSGNLAMLNDNVLGnTRELKLAGDTGFDMRGHSQTIGKLTAESGSLTDLNGGhlT 1615
Cdd:PRK15319  1234 SLTKEGAGTLILSG-DNDYSGGTTINEGTLVAASTTALG-TGLVDNNATLVLDADGEVSAVGGITTHSGATTQLALG--T 1309
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1616 LTNGGEASGVLTGDGELTVAGGTLNVSGANTGLKATTTiaqGATAVLDNTLGLGTGD--IVAAGLLNLSNATGVLYNSIS 1693
Cdd:PRK15319  1310 SLDLGDSALIQQDGSTLNVELNSDSVQPLITGGSATLG---GDLVVSDASLQARASDaeFQSFKLMDMDSDISGDFTSLT 1386
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1694 ---DAGKVALDASDVVLAGNNSHFAGTFDIDNDSTLTASSAQQlGTSAIQNAGKFVLNTHENWSLENGVTGSGSVVKNGS 1770
Cdd:PRK15319  1387 mnlTDQPDYLTVTGTINPEDASEYLLTEGLSWNATATSATPAH-GTFTLGAGDSFEVTSVLGDKTGNGDWDGKSLTKLGA 1465
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1771 GNVTLSDSAQWTGATDINAGGLTLGSADNAFTLASHQ-VNIGKDGRLSGFGG--VAGNMANQGTLLIGDdvsaarrAVSS 1847
Cdd:PRK15319  1466 GKLTLSGANTYTGDTNVQEGTLWLSGDGSIGEMGSQQaVNVASGATFGGSNGttVNGKVTNEGTLVFGD-------SEET 1538
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1848 PVSFTVGGNLTNSGDIWTGSKGKDAGNQLVVNGNYQGDGGHLHLNTALNDDNSVTDKLIVKGNTSGTTGVSVtNAGGSGA 1927
Cdd:PRK15319  1539 GAIFTLNGDLINMGTMTSGSSSSTPGNTLYVDGNYTGNGGSLYLNTVLGDDDSATDKLVITGDASGTTDLYI-NGIGDGA 1617
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1928 QTINGIEVIHVDGQSDGE-FTQDGRIVAGAYDYSLARGQGDNNgnWYLTSHK-----------------------TDPN- 1982
Cdd:PRK15319  1618 QTTNGIEVVDVGGVSTSDaFELKNEVNAGLYTYRLYWNESDND--WYLASKAqsddddsggddtpsdggddggnvTPPDd 1695
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1983 ---------------------PGPGPKPEPDIRPEPGSWTANLAAANTLFVTRLHDRLGeTQYIDAltgekkVTSMWMRQ 2041
Cdd:PRK15319  1696 ggdggnvtppddggdggdvtpPDHGGDVAPQYRADIGAYMGNQWMARNLQMQTLYDREG-SQYRNA------DGSVWARF 1768
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2042 AGGHNAWRDSSGQLKTQSNRYVMQVGGDVARWsGDGLDRWHLGVMAGYGHNSSNTRSSSTG----YRSDGSVNGYSAGVY 2117
Cdd:PRK15319  1769 KAGKAESEAVSGNIDMDSNYSQFQLGGDILAW-GNGQQSVTVGVMASYINADTDSTGNRGAdgsqFTSSGNVDGYNLGVY 1847
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2118 ATWYANDETHQGAYLDSWAQYSWFNNSVKGQDIQSESYKSKGITGSLELGYTHKLGEFAGSKGSknewfIQPQAQAIWMG 2197
Cdd:PRK15319  1848 ATWFADAQTHSGAYVDSWYQYGFYNNSVESGDAGSESYDSTANAVSLETGYRYDIALSNGNTVS-----LTPQAQVVWQN 1922
                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2198 VEADDHRESNGTRISGEGDGNVQTRLGVRTflkgHSAIDEGKAREFQPFVEVNWLHNTRDFGTKMDGVSIRQEGARNLGE 2277
Cdd:PRK15319  1923 YSADSVKDNYGTRIDGQDGDSWTTRLGLRV----DGKLYKGSRTVIQPFAEANWLHTSDDVSVSFDDATVKQDLPANRAE 1998
                         1450      1460      1470      1480
                   ....*....|....*....|....*....|....*....|.
gi 1438035728 2278 IKTGVEGQINPQLNVWGNVGVQLGDKGYNDTSAMIGIKYNF 2318
Cdd:PRK15319  1999 LKVGLQADIDKQWSVRAQVAGQTGSNDFGDLNGSLNLRYNW 2039
PRK09752 PRK09752
AIDA-I family autotransporter YfaL;
1248-2314 8.26e-57

AIDA-I family autotransporter YfaL;


Pssm-ID: 182059 [Multi-domain]  Cd Length: 1250  Bit Score: 218.00  E-value: 8.26e-57
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1248 NNSVFTlDNVALGLGddeldgaGTGYTIDGSSQLSIkntaDVTFKSHLAGTGVVAVDTANNHFNFD--ANNAADGFAgTL 1325
Cdd:PRK09752   227 NNTAFT-NNTAEGYG-------GAIYTNSATAPYLI----DISVDDSYSQNGGVLVDENNSAAGYGdgPSSAAGGFM-YL 293
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1326 ALTNSRFELDGLNTQALSNATLQ------AGNGSITHVGSGEQ--NIGGLDFKGG-TVQFDGVTPGNPTALGTIHAGAMD 1396
Cdd:PRK09752   294 GLSEVTFDIADGKTLVIGNTENDgavdsiAGTGLITKTGSGDLvlNADNNDFTGEmQIENGEVTLGRSNSLMNVGDTHCQ 373
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1397 LSGRGTVQVDSGTVSNDRPQADTHRPILEQDDAQALIKLATSDTAVQGGAGNLVLKDKDGNVISDSITADIAQNGVVVAK 1476
Cdd:PRK09752   374 DDPQDCYGLTIGSIDKYQNQAELNVGSTQQTFVHSLTGFQNGTLNIDAGGNVTVNQGSFAGTIEGAGQLTIAQNGSYVLA 453
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1477 GTYDYRLTGGDS-DDGLYVSYGLTQVDL--LGKDADALILDangksGNAADLSARVTGSGDLAFD-----SQKGQTVTLS 1548
Cdd:PRK09752   454 GAQSMALTGDIVvDDGAVLSLEGDAADLraLQDDPQSIVLN-----GGVLDLSDFSTWQSGTSYNdglevSGSSGTVIGS 528
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1549 NMDNDYSGVTDVRSGNLAMLNDNVLGNtrelklAGDTGFDMRGHSQTIGKLTAESGSLTDLNGGHLTLTNGGEaSGVLTG 1628
Cdd:PRK09752   529 QDVVDLAGGDDLHIGGDGKDGVYVVID------AGDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNR-QVIFTD 601
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1629 DGELTVAGGTLNVSGANTglkaTTTIAQGATAVLDNTLGLGTGDIVAAGLLnLSNATGVLYNSISDAGKVAldasdvvla 1708
Cdd:PRK09752   602 KQQESVMEITADVDTRST----TTGHGRDIEMRADGEVAVDAGVDTQWGAL-MADSSGQHQDEGSTLTKTG--------- 667
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1709 gnnshfAGTFDIDNDSTLTASSAQQLGTSAiQNAGKFVLNTHENWslengvTGSGSVVKNGSGNVTLSDSAQWTGATDIN 1788
Cdd:PRK09752   668 ------AGTLELTASGTTQSAVRVEEGTLK-GDVADIIPYASSLW------VGDGATFVTGADQDIQSIDATSSGTIDIS 734
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1789 AGgltlgsadNAFTLASHQVNIGKDGRLSGFGGVAGNMANQGTLLIGDDVSAARRAVSSPVSFTVGGNLTNSGDIWTGSK 1868
Cdd:PRK09752   735 DG--------TVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSDVTVNGNLTNTSGAVSLQN 806
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1869 GKdAGNQLVVNGNYQGdGGHLHLNTALNDDNSVTDKLIVKGNTSGTTGVSVTNAGGSGAQTINGIEVIHVDG-----QSD 1943
Cdd:PRK09752   807 GV-AGDTLTVNGDYTG-GGTLLLDSELNGDDSVSDQLVLNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAAdptqfQNN 884
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1944 GEFT--QDGRIVAGAYDYSLArgqgDNNGNWYLTSHKT--------DPNPGPGPKPEPDIRPEP--------------GS 1999
Cdd:PRK09752   885 AQFSlaGSGYVNMGAYDYTLV----EDNNDWYLRSQEVtppsppdpDPTPDPDPTPDPDPTPDPeptpayqpvlnakvGG 960
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2000 WTANLAAANTLFVTRLHDRLGETQyidaltgekkvTSMWMRQAGGHNAWrDSSGQLKTQSNRYVMQVGGDV--ARWSGDG 2077
Cdd:PRK09752   961 YLNNLRAANQAFMMERRDHAGGDG-----------QTLNLRVIGGDYHY-TAAGQLAQHEDTSTVQLSGDLfsGRWGDDG 1028
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2078 ldRWHLGVMAGYGHNSSNTRSSSTGYRSDGSVNGYSAGVYATWYANDETHQGAYLDSWAQYSWFNNSVKGQDIQSESYKS 2157
Cdd:PRK09752  1029 --EWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFNNDVSEQEDGTDHYHS 1106
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2158 KGITGSLELGYTHKLGEFAgskgsknewFIQPQAQAIWMGVEADDHRESNGTRISGEGDGNVQTRLGVRTFLKghsaide 2237
Cdd:PRK09752  1107 SGIIASLEAGYQWLPGRGV---------VIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWR------- 1170
                         1050      1060      1070      1080      1090      1100      1110
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1438035728 2238 gKAREFQPFVEVNWLHNTRDFGTKMDGVSIRQEGARNLGEIKTGVEGQINPQLNVWGNVGVQLGDKGYNDTSAMIGI 2314
Cdd:PRK09752  1171 -TAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSM 1246
PL2_Passenger_AT cd01344
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of ...
1771-1981 1.52e-42

Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 2, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of the nonprotease autotransporters, Ag43, AIDA-1 and IcsA, as well as, the less characterized ShdA, MisL, and BapA autotransporters.


Pssm-ID: 238654 [Multi-domain]  Cd Length: 188  Bit Score: 154.76  E-value: 1.52e-42
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1771 GNVTLSDSAQWTGATDINAGGLTLgsaDNAFTLashqvnigkDGRLSGFGGVAGNMANQGTLLIGDDVSAArravsspvs 1850
Cdd:cd01344      1 GTITGNGGWKLGGDLTLGGGALTL---TTSLTL---------TGTLLTGGAGTLTLDSTSTWNITGTSTLN--------- 59
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1851 ftvGGNLTNSGDIWTGSkGKDAGNQLVVNGNYQGDGGHLHLNTALNDDNSVTDKLIVKGNTSGTTGVSVTNAGGSGAQTI 1930
Cdd:cd01344     60 ---VGNLTNAGTIDLGN-GSPAGGTLTITGNYTGNGGTLRLNTVLGDDDSPTDRLVIDGDASGTTRVAVNNAGGSGATTG 135
                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1438035728 1931 NGIEVIHVDG-QSDGEFTQDGRIVAGAYDYSLARGQGD-NNGNWYLTSHKTDP 1981
Cdd:cd01344    136 NGIEVVEVGGtSSNGAFSLAGRVVAGAYEYRLYRGGVSgNDGNWYLRSELAPP 188
PL_Passenger_AT cd00253
Pertactin-like passenger domains (virulence factors) of autotransporter proteins of the type V ...
1797-1981 1.57e-36

Pertactin-like passenger domains (virulence factors) of autotransporter proteins of the type V secretion system. Autotransporters are proteins used by Gram-negative bacteria to transport proteins across their outer membranes. The C-terminal (beta) domain of autotransporters forms a pore in the outer membrane through which the N-terminal passenger domain is transported. Following transport, the passenger domain is generally cleaved by an outer membrane protease with the passenger domain either remaining in contact with the surface via a noncovalent interaction with the beta domain or cleaved to release a soluble protein. These proteins are highly diverse and perform a variety of functions that promote virulence, including catalyzing proteolysis, serving as an adhesin, mediating actin-promoted motility, or serving as a cytotoxin. Proteins in this family share similarity in the C-terminal region of the passenger domain as seen in the pertactin structure P.69, a Bordetella pertussis agglutinogen responsible for human pertussis. The P.69 protein consists of a 16-stranded parallel beta-helix with a V-shaped cross-section, and is one of the largest beta-helix known to date.


Pssm-ID: 238156 [Multi-domain]  Cd Length: 186  Bit Score: 137.50  E-value: 1.57e-36
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1797 ADNAFTLASHQVNIGKDGR--LSGFGGVAGNMANQGTLLIGDDVSAARRAVSSpvsfTVGGNLTNSGDIWTGSKGKDAGN 1874
Cdd:cd00253      4 SGNATINGGGDLTLGGGGAltLTGNSVWLGTLQAGGGTVSLNSNSLWTLTGDS----TVNGNLTNSGGTVDFGSASGAFN 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1875 QLVVNGNYQGDGGHLHLNTALNDDNSVTDKLIVKGNTSGTTGVSVTNAGGSGAQTINGIEVIHVDGQSDGEFTQDGRIVA 1954
Cdd:cd00253     80 TLTVNGNYLGGNGTFVLNTDLGGDNSPTDKLVVTGNASGTTNVAVVNAGGEGASTGDGIELVEVNGGSDAAFSLAGRVDA 159
                          170       180
                   ....*....|....*....|....*..
gi 1438035728 1955 GAYDYSLARGQGDNNGNWYLTSHKTDP 1981
Cdd:cd00253    160 GAYEYTLYKGGVGNNGNWYLRSTLAPP 186
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
325-1944 1.36e-35

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 149.53  E-value: 1.36e-35
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  325 GIFADTGSIAADDAIRAFVNRDAVSYIHGVGSGTNVVIDKDANIQLVGSDATVVNLENGARLTNNGTLGTAGNTYRGAYI 404
Cdd:COG3210     64 GSGTAGGVGNTSASTGGIGAAAANTAGTLETGLTSNIGGGSVNGSNSTGNGTLTTTAASATTGNNTGGTTTSSTNTVTTL 143
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  405 IAARNTSFVDNNGVIDAGTNPEMADFFSSGAAGVAQGAHTAILANGSSVINNNSSGVINVAARGNYYGNTGVLMSGNATL 484
Cdd:COG3210    144 GGTTTGNTVLSTSGAGNNTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASA 223
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  485 NNDGAINIAASNEANSILGNGANIGVVTQQNTTFNNRGTLYIGRLAQRAPDDANTDIAIKQQSIGvhLYGNGTYNGSDTS 564
Cdd:COG3210    224 NSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTA--GASSGDTTTNGTS 301
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  565 QIIIGSKVQNATAIDVGGNATLDQKGSININGAVTGESVSSNIGIIARAGTQAAKVVHDGIINLNGLNSTGIQVLENGQI 644
Cdd:COG3210    302 SVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVA 381
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  645 TSSGTININGGLDPVTHYANYGIYVQGEKALAILSGTVNLSGDGAIGVHARDKGEIDVTENGTVNFKDGVNQTGYYIFGA 724
Cdd:COG3210    382 STVGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLS 461
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  725 GSTiKNAASSVQDASTQNATLYRVDGGASFYGSADSSAQLNASGDGATIIRTTGAGSHFDSGKLALSVTGTGATGIRIEG 804
Cdd:COG3210    462 GNT-DVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLS 540
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  805 GATGEITSDAVIVRVAGKDTTAGIVDGNYYNLDGSVNDAQKGDSVLTSYAVLETANTADGAFGYIARNGGRLIHEGSIDF 884
Cdd:COG3210    541 GSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGT 620
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  885 TADNSTGILVDGGILENHSDVTVNGVAVNIQGANSEVTNSGVVTATDGQAAYLVGNNATLALNGNGETRAAGTAHGILLD 964
Cdd:COG3210    621 SGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLN 700
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  965 TGAKGLTVDGATITMDSAGSGNAIENKAAISGIQLKN-TTINVGNGVGVHTGASMAQTNSGTININGSGTGILFENVADG 1043
Cdd:COG3210    701 NAGNTLTISTGSITVTGQIGALANANGDTVTFGNLGTgATLTLNAGVTITSGNAGTLSIGLTANTTASGTTLTLANANGN 780
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1044 SDTDQTLDMSDSR---------------DLVINVNGAQGNGIITRASTDLKTGASVNVLDSDGKSALVVQGTTKNVEQSG 1108
Cdd:COG3210    781 TSAGATLDNAGAEisiditadgtitaagTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGG 860
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1109 KLTSVSDKAAVVDLNNGVLESFINKGDILALDASHTALEMNSGNGITFTNASGANIVGQVNLLNGDNTVILESGSTATDI 1188
Cdd:COG3210    861 GTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGN 940
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1189 TSGSGKDNFILkNISENESGSLFTSLNGGSGDDTLQLENSSYTLTRADAINGMEHIALANNSVFTLDNVALGLGDDELDG 1268
Cdd:COG3210    941 GTTALSGTQGN-AGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGG 1019
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1269 AGTGYTIDGSSQLSIKNTADVTFKSHLAGTGVVAVDTANNHFNFDANNAADGFAGTLALTNSRFELDGLNTQALSNATLQ 1348
Cdd:COG3210   1020 NGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITN 1099
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1349 AGNGSITHVGSGEQNIGGLDFKGGTVQFDGVTPGNPTALGTIHAGAMDLSGRGTVQ--VDSGTVSNDRPQADTHRPILEQ 1426
Cdd:COG3210   1100 GGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAggASSASAGDTTAVAAATTTTTGS 1179
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1427 DDAQALIKLATSDTAVQGGAGNLVLKDKDGNVISDSITADIAQNGVVVAKGTYDYRLTGGDSDDGLYVSYGLTQVDLLGK 1506
Cdd:COG3210   1180 AINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTG 1259
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1507 DADALILDANGKSGNAADLSARVTGSGDLAFDSQKGQTVTLSNMDNDYSGVTDVRSGNLAMLNDNVLGNTRELKLAGDTG 1586
Cdd:COG3210   1260 ATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAG 1339
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1587 FDMRGHSQTIGKLTAESGSLTDLNGGHLTLTNGGEASGVLTGDGELTVAGGTLNVSGANTGLKATTTIAQGATAVLDNTL 1666
Cdd:COG3210   1340 GGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSG 1419
                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1667 GLGTGDIVAAGLLNLSNATGVLYNSISDAGKVALDASDVVLAGNNSHFAGTFDIDNDSTLTASSAQQLGTSAIQNAGKFV 1746
Cdd:COG3210   1420 TTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATA 1499
                         1450      1460      1470      1480      1490      1500      1510      1520
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1747 LNTHENWSLENGVTGSGSVVKNGSGNVTLSDSAQWTGATDINAGGLTLGSADNAFTLASHQVNIGKDGRLSGFGGVAGNM 1826
Cdd:COG3210   1500 SNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTG 1579
                         1530      1540      1550      1560      1570      1580      1590      1600
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1827 ANQGTLLIGDDVSAARRAVSSPVSFTVGGNLTNSGDIWTGSKGKDAGNQLVVNGNYQGDGGHLHLNTALNDDNSVTDKLI 1906
Cdd:COG3210   1580 GADDTGAQAPTAGNTATLTLSLAEGTNAEYGGTTNVTSGTAGNAGATGANSNTVVTTNGGEGVLALVAGGNTTNGTTLSG 1659
                         1610      1620      1630
                   ....*....|....*....|....*....|....*...
gi 1438035728 1907 VKGNTSGTTGVSVTNAGGSGAQTINGIEVIHVDGQSDG 1944
Cdd:COG3210   1660 AVNGAGNGWAVDLTDATLAGLGGATTAAAGNVATGDTA 1697
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
347-1971 1.10e-33

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 143.37  E-value: 1.10e-33
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  347 AVSYIHGVGSGTNVVIDKDANIQLVGSDATVVNLENGARLTNNGTLGTAGNTYRGAYIIAARNTSFVDNNGVIDAGTNPE 426
Cdd:COG3210      1 GSGGLAGTTGNKTIGVDIAVTTTAATLGSNTAGTSGLNILGSGGVGTAGGIASNAGTTASTSGGSGTAGGVGNTSASTGG 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  427 MADFFSSGAAGVAQGAHTAILANGssVINNNSSGVINVAARGNYYGNTGVLMSGNATLNNDGAINIAASNEANSILGNGA 506
Cdd:COG3210     81 IGAAAANTAGTLETGLTSNIGGGS--VNGSNSTGNGTLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGA 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  507 NIGVVTQQNTTFNNRGTLYIGRLAQRAPDDANTDIAIKQQSIGVHLYGNGTYNGSDTSQIIIGSKVQNATAIDVGGNATL 586
Cdd:COG3210    159 GNNTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGA 238
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  587 DQKGSININGAVTGESVSSNIGIIARAGTQAAKVVHDGIINLNGLNSTGIQVLENGQITSSGTININGGLDPVTHYANYG 666
Cdd:COG3210    239 GVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAA 318
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  667 IYVQGEKALAILSGTVNLSGDGAIGVhardkGEIDVTENGTVNFKDGVNQTGYYIFGAGSTIKNAASSVQDASTQNATLY 746
Cdd:COG3210    319 GITTTNTVGGNGDGNNTTANSGAGLV-----SGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGN 393
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  747 RVDGGASFYGSADSSAQLNASGDGATIIRTTGAGSHFDSGKLALSVTGTGATGIRIEGGATGEITSDAVIVRVAGKDTTA 826
Cdd:COG3210    394 ASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVT 473
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  827 GIVDGNYYNLDGSVNDAqkGDSVLTSYAVLETANTADGAFGYIARNGGRLIHEGSIDFTADNSTGILVDGGILENHSDVT 906
Cdd:COG3210    474 NSAGNTTSATTLAGGGI--GTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGG 551
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  907 VNGVAVNIQGANSEVTNSGVVTATDGQAAYlVGNNATLALNGNGETRAAGTAHGILLDTGAKGLTVDGATITMDSAGSGN 986
Cdd:COG3210    552 ASGTTAASGSNTANTLGVLAATGGTSNATT-AGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGG 630
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  987 AIENKAAISGIQLKNTTINVGNGVGVHTGASMAQTNSGTININGSGTGILFENVADGSDTDQTLDMSDSRDLVINVNGAQ 1066
Cdd:COG3210    631 GAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTIST 710
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1067 GNGIITRASTDLKTGASVNVLDSDGKSALVVQGTTKNVEQSGKLTSVSDKAAVVDLNNGVLESFINKGDILALDASHTAL 1146
Cdd:COG3210    711 GSITVTGQIGALANANGDTVTFGNLGTGATLTLNAGVTITSGNAGTLSIGLTANTTASGTTLTLANANGNTSAGATLDNA 790
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1147 EMNSGNGITFTNASGANIVGQVNLLNGDNTVILESGSTATDITSGSGKDNFILKNISENESGSLFTSLNGGSGDDTLQLE 1226
Cdd:COG3210    791 GAEISIDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSL 870
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1227 NSSYTLTRADAINGMEHIALANNSVFTLDNVALGLGDDELDGAGTGYTIDGSSQLSIKNTADVTFKSHLAGTGVVAVDTA 1306
Cdd:COG3210    871 AATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQG 950
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1307 NNHFNFDANNAADGFAGTLALTNSRFELDGLNTQALSNATLQAGNGSITHVGSGEQNIGGLDFKGGTVQFDGVTPGNPTA 1386
Cdd:COG3210    951 NAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTAS 1030
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1387 LGTIHAGAMDLSGRGTVQVDSGTVSNDRPQADTHRPILEQDDAQALIKLATSDTAVQGGAGNLVLKDKDGNVISDSITAD 1466
Cdd:COG3210   1031 ATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTT 1110
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1467 IAQNGVVVAKGTYDYRLTGGDSDDGLYVSYGLTQVDLLGKDADALILDANGKSGNAADLSARVTGSGDLAFDSQKGQTVT 1546
Cdd:COG3210   1111 TSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAAT 1190
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1547 LSNMDNDYSGVTDVRSGNLAMLNDNVLGNTRELKLAGDTGFDMRGHSQTIGKLTAESGSLTDLNGGHLTLTNGGEASGVL 1626
Cdd:COG3210   1191 EGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGAT 1270
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1627 TGDGELTVAGGTLNVSGANTGLKATTTIAQGATAVLDNTLGLGTGDIVAAGLLNLSNATGVLYNSISDAGKVALDASDVV 1706
Cdd:COG3210   1271 STVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANT 1350
                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1707 LAGNNSHFAGTFDIDNDSTLTASSAQQLGTSAIQNAGKFVLNTHENWSLENGVTGSGSVVKNGSGNVTLSDSAQWTGATD 1786
Cdd:COG3210   1351 GLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSA 1430
                         1450      1460      1470      1480      1490      1500      1510      1520
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1787 INAGGLTLGSADNAFTLASHQVNIGKDGRLSGFGGVAGNMANQGTLLIGDDVSAARRAVSSPVSFTVGGNLTNSGDIWTG 1866
Cdd:COG3210   1431 TTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGG 1510
                         1530      1540      1550      1560      1570      1580      1590      1600
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1867 SKGKDAGNQLVVNGNYQGDGGHLHLNTALNDDNSVTDKLIVKGNTSGTTGVSVTNAGGSGAQTINGIEVIHVDGQSDGEF 1946
Cdd:COG3210   1511 TAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPT 1590
                         1610      1620
                   ....*....|....*....|....*
gi 1438035728 1947 TQDGRIVAGAYDYSLARGQGDNNGN 1971
Cdd:COG3210   1591 AGNTATLTLSLAEGTNAEYGGTTNV 1615
Autotransporter pfam03797
Autotransporter beta-domain; Secretion of protein products occurs by a number of different ...
2037-2297 2.35e-32

Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C terminus of the proteins it occurs in. The N terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.


Pssm-ID: 461054 [Multi-domain]  Cd Length: 255  Bit Score: 127.89  E-value: 2.35e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2037 MWMRQAGGHNAWRDSSGQLKTQSNRYVMQVGGDVARwsgdgLDRWHLGVMAGYGHNSSNTRssstGYRSDGSVNGYSAGV 2116
Cdd:pfam03797    1 VWARGFGGRGKQDGDGGAAGYDADTGGLQVGADYRL-----GDNLRLGVAFGYSRSDADVD----GRGGSGDSDSYSLGL 71
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2117 YATWYANDethqGAYLDSWAQYSWFNNSVK-------GQDIQSESYKSKGITGSLELGYTHKLGefagskgskNEWFIQP 2189
Cdd:pfam03797   72 YGTYYGDG----GWYLDGGLGYGWHDNDTRrsvdlggFSETAKGDYDGNGFGASLEAGYRFALG---------GGWTLEP 138
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2190 QAQAIWMGVEADDHRESNG---TRISGEGDGNVQTRLGVRTFLKGHSAidegkAREFQPFVEVNWLHNTRD--------- 2257
Cdd:pfam03797  139 FAGLAYVRLRLDGFTESGGaaaLSVDSQSYDSLTGRLGLRLSYTFDLG-----GGTLTPYARLGWRHEFGDddpvttaaf 213
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|..
gi 1438035728 2258 --FGTKMDGVSIRQEGARNLGEIKTGVEGQINPQLNVWGNVG 2297
Cdd:pfam03797  214 agLSGAGSFTVAGADLARDSLELGAGLSAQLSDNLSLYANYD 255
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
190-1840 5.96e-31

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 134.12  E-value: 5.96e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  190 GASLDVDVGQKTGNWVGAADNQFNVIMKSSVNTQNLSSAYHVTNGGSLNYQSKTVVQLGNSDNNIKDASNALAWMTAADF 269
Cdd:COG3210     31 TAGTSGLNILGSGGVGTAGGIASNAGTTASTSGGSGTAGGVGNTSASTGGIGAAAANTAGTLETGLTSNIGGGSVNGSNS 110
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  270 VGEFDSVIGKQNITNIDEFKAYNDALIQALQDGQIQLTEAQYADELNKARDTSLHGIFADTGSIAADDAIRAFVNRDAVS 349
Cdd:COG3210    111 TGNGTLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNNTNTNNSSSGTNIGNSIPTTGGSLNVVAAN 190
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  350 YIHGVGSGTNVVIDKDANIQLVG-----------SDATVVNLENGARLTNNGTLGTAGNTYRGAYIIAARNTSFVDNNGV 418
Cdd:COG3210    191 PTGVTGVGGALINATAGVLANAGggtaggvasanSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGN 270
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  419 IDAGTNPEMADFFSSGAAGVAQGAHTAILANGSSVINNNSSGVINVAARGNYYGNTGVLMSGNATLNNDGAINIAASNEA 498
Cdd:COG3210    271 TTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGG 350
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  499 NSILGNGANIGVVTQQNTTFNNRGTLYIGRLAQRAPDDANTDIAIKQQSIGvhlyGNGTYNGSDTSQIIIGSKVQNATAI 578
Cdd:COG3210    351 NNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLG----SGSLATGNTGTTIAGNGGSANAGGF 426
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  579 DVGGNATLDQKGSININGAVTGESVSSNIGIIARAGTQAAKVVHDGIINLNGLNSTGIQVLENGQITSSGTININGGLDP 658
Cdd:COG3210    427 TTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGD 506
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  659 VTHYANYGIYVQGEKALAILSGTVNLSGDGAIGVHARDKGEIDVTENGTVNFKDGVNQTGYYIFGAGSTIKNAASSVQDA 738
Cdd:COG3210    507 ANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNST 586
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  739 STQNATLYRVDGGASFYGSADSSAQLNASGDGATIIRTTGAGSHFDSGKLAL---SVTGTGATGIRIEGGATGEITSDAV 815
Cdd:COG3210    587 SATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAvgaALSGTGSGTTGTASANGSNTTGVNT 666
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  816 IVRVAGKDTTAGIVDGNYYNLDGSVNDAQKGDSVLTSYAVLETAN--TADGAFGYIARNGGRLIHEGSIDFTADN--STG 891
Cdd:COG3210    667 AGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGsiTVTGQIGALANANGDTVTFGNLGTGATLtlNAG 746
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  892 ILVDGG-----ILENHSDVTVNGVAVNIQGANSEVTNSGVVTATDGQAAYLVGNNATLALNGNGETRAAGTAHGILLDTG 966
Cdd:COG3210    747 VTITSGnagtlSIGLTANTTASGTTLTLANANGNTSAGATLDNAGAEISIDITADGTITAAGTTAINVTGSGGTITINTA 826
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  967 AKGLTVDGATITMDSAGSGNAIENKAAISGIQLKNTTINVGNGVGVHTGASMAQTNSGTININGSGTGILFENVADGSDT 1046
Cdd:COG3210    827 TTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAA 906
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1047 DQTLDMSDSRDLVINVNGAQGNGIITRASTDLKTGASVNVLDSDGKSALVVQGTTKNVEQSGKLTSVSDKAAVVDLNNGV 1126
Cdd:COG3210    907 SGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGS 986
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1127 LESFINKGDILALDASHTALEMNSGNGITFTNASGANIVGQVNLLNGDNTVILESGSTATDITSGSGKDNFILKNISENE 1206
Cdd:COG3210    987 TGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGT 1066
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1207 SGSLFTSLNGGSGDDTLQLENSSYTLTRADAINGMEHIALANNSVFTLDNVALGLGDDELDGAGTGYTIDGSSQLSIKNT 1286
Cdd:COG3210   1067 AGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLT 1146
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1287 ADVTfkshlAGTGVVAVDTANNHFNFDANNAADGFAGTLALTNSRFELDGLNTQALSNATLQAGNGSITHVGSGEQNIGG 1366
Cdd:COG3210   1147 GLVA-----VSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTT 1221
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1367 LDFKGGTVQFDGVTPGNPTALGTIHAGAMDLSGRGTVQVDSGTVSNDRPQADTHRPILEQDDAQALIKLATSDTAVQGGA 1446
Cdd:COG3210   1222 LTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLD 1301
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1447 GNLVLKDKDGNVISDSITADIAQNGVVVAKGTYDYRLTGGDSDDGLYVSYGLTQVDLLGKDADALILDANGKSGNAADLS 1526
Cdd:COG3210   1302 TTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAG 1381
                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1527 ARVTGSGDLAFDSQKGQTVTLSNMDNDYSGVTDVRSGNLAMLNDNVLGNTRELKLAGDTGFDMRGHSQTIGKLTAESGSL 1606
Cdd:COG3210   1382 TVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADASAINTG 1461
                         1450      1460      1470      1480      1490      1500      1510      1520
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1607 TDLNGGHLTLTNGGEASGVLTGDGELTVAGGTLNVSGANTGLKATTTIAQGATAVLDNTLGLGTGDIVAAGLLNLSNATG 1686
Cdd:COG3210   1462 NASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGT 1541
                         1530      1540      1550      1560      1570      1580      1590      1600
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1687 VLYNSISDAGKVALDASDVVLAGNNSHFAGTFDIDNDSTLTASSAQQLGTSAIQNAGKFVLNTHENWSLENGVTGSGSVV 1766
Cdd:COG3210   1542 GGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNTATLTLSLAEGTNAEYGGTTNVTSGTAG 1621
                         1610      1620      1630      1640      1650      1660      1670
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1438035728 1767 KNGSGNVTLSDSAQWTGATDINAGGLTLGSADNAFTLASHQVNIGKDGRLSGFGGVAGNMANQGTLLIGDDVSA 1840
Cdd:COG3210   1622 NAGATGANSNTVVTTNGGEGVLALVAGGNTTNGTTLSGAVNGAGNGWAVDLTDATLAGLGGATTAAAGNVATGD 1695
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
185-1798 2.49e-28

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 125.65  E-value: 2.49e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  185 YQVGAGASLDVDVGQKTGNWVGAADNQFNVIMKSSVNTQNLSSAYHVTNGGSLNYQSKTVVQLGNSDNNIKDASNALAWM 264
Cdd:COG3210     67 TAGGVGNTSASTGGIGAAAANTAGTLETGLTSNIGGGSVNGSNSTGNGTLTTTAASATTGNNTGGTTTSSTNTVTTLGGT 146
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  265 TAADFVGEFDSVIGKQNITNIDEFKAYNDALIQALQDGQIQLTEAQYADELNKARDTSLHGIFADTGSIAADDAIRAFVN 344
Cdd:COG3210    147 TTGNTVLSTSGAGNNTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASANST 226
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  345 RDAVSYIHGVGSGTNVVIDKDANIQLVGSDATVVNLENGARLTNNGTLGTAGNTYRGAYIIAARNTSFVDNNGVIDAGTN 424
Cdd:COG3210    227 LTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGA 306
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  425 PEMADFFSSGAAGVAQGAHTAILANGSSVINNNSSGVINVAARGNYYGNTGVLMSGNATLNNDGAINIAASNEANSILGN 504
Cdd:COG3210    307 GGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGT 386
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  505 GANIGVVTQQNTTFNNRGTLYIGRLAQRAPDDANTDIAIKQQSIGVHLYGNGTYNGSDTSQIIIGSKVQNATAIDVGGNA 584
Cdd:COG3210    387 ATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDV 466
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  585 TLDQKGSININGAVTGESVSSNIGIIARAGTQAAKVVHDGIINLNGLNSTGIQVLENGQITSSGTININGGLDPVTHYAN 664
Cdd:COG3210    467 SGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTT 546
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  665 YGIYVQGEKALAILSGTVNLSGDGAIGVHARDkgeIDVTENGTVNFKDGVNQTGYYIFGAGSTIKNAASSVQDASTQNAT 744
Cdd:COG3210    547 TVSGGASGTTAASGSNTANTLGVLAATGGTSN---ATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGA 623
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  745 LYRVDGGASFYGSADSSAQLNASGDGATIIRTTGAGSHFDSGKLALSVTGTGATGIRIEGGATGEITSDAVIVRVAGKDT 824
Cdd:COG3210    624 GANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAG 703
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  825 TAGIVDGNYYNLDGSVND--AQKGDSVLTSYAVLETANTADGAFGYIARNGGRLIHEGSIDFTAD--------------- 887
Cdd:COG3210    704 NTLTISTGSITVTGQIGAlaNANGDTVTFGNLGTGATLTLNAGVTITSGNAGTLSIGLTANTTASgttltlanangntsa 783
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  888 ----NSTGILVDGGILENHSDVTVNGVAVNIQGANSEVTNSGVVTATDGQAAYLVGNNATLALNGNGETRAAGTAHGILL 963
Cdd:COG3210    784 gatlDNAGAEISIDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTA 863
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  964 DTGAKGLTVDGATITMDSAGSGNAIENKAAISGIQLKNTTINVGNGVGVHTGASMAQTNSGTININGSGTGILFENVADG 1043
Cdd:COG3210    864 GANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTT 943
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1044 SDTDQTLDMSDSRDLVINVNGAQGNGIITRASTDLKTGASVNVLDSDGKSALVVQGTTKNVEQSGKLTSVSDKAAVVDLN 1123
Cdd:COG3210    944 ALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVT 1023
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1124 NGVLESFINKGDILALDASHTALEMNSGNGITFTNASGANIVGQVNLLNGDNTVILESGSTATDITSGSGKDNFILKNIS 1203
Cdd:COG3210   1024 GTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGAT 1103
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1204 ENESGSLFTSLNGGSGDDTLQLENSSYTLTRADAINGMEHIALANNSVFTLDNVALGLGDDELDGAGTGYTIDGSSQLSI 1283
Cdd:COG3210   1104 GTSGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAING 1183
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1284 KNTADVTFKSHLAGTGVVAVDTANNHFNFDANNAADGFAGTLALTNSRFELDGLNTQALSNATLQAGNGSITHVGSGEQN 1363
Cdd:COG3210   1184 GADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAG 1263
                         1210      1220      1230      1240      1250      1260      1270      1280
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1364 IGGLDFKGGTVQFDGVTPGNPTALGTIHAGAMDLSGRGTVQVDSGTVSNDRPQADTHRPILEQDDAQALIKLATSDTAVQ 1443
Cdd:COG3210   1264 AVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTI 1343
                         1290      1300      1310      1320      1330      1340      1350      1360
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1444 GGAGNLVLKDKDGNVISDSITADIAQNGVVVAKGTYDYRLTGGDSDDGLYVSYGLTQVDLLGKDADALILDANGKSGNAA 1523
Cdd:COG3210   1344 NTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVA 1423
                         1370      1380      1390      1400      1410      1420      1430      1440
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1524 DLSARVTGSGDLAFDSQKGQTVTLSNMDNDYSGVTDVRSGNLAMLNDNVLGNTRELKLAGDTGFDMRGHSQTIGKLTAES 1603
Cdd:COG3210   1424 GTTGSSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGG 1503
                         1450      1460      1470      1480      1490      1500      1510      1520
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1604 GSLTDLNGGHLTLTNGGEASGVLTGDGELTVAGGTLNVSGANTGLKATTTIAQGATAVLDNTLGLGTGDIVAAGLLNLSN 1683
Cdd:COG3210   1504 TSTGAGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADD 1583
                         1530      1540      1550      1560      1570      1580      1590      1600
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1684 ATGVLYNSISDAGKVALDASDVVLAGNNSHFAGTFDIDNDSTLTASSAQQLGTSAIQNAGKFVLNTHENWSLENGVTGSG 1763
Cdd:COG3210   1584 TGAQAPTAGNTATLTLSLAEGTNAEYGGTTNVTSGTAGNAGATGANSNTVVTTNGGEGVLALVAGGNTTNGTTLSGAVNG 1663
                         1610      1620      1630
                   ....*....|....*....|....*....|....*
gi 1438035728 1764 SVVKNGSGNVTLSDSAQWTGATDINAGGLTLGSAD 1798
Cdd:COG3210   1664 AGNGWAVDLTDATLAGLGGATTAAAGNVATGDTAP 1698
Autotransporter smart00869
Autotransporter beta-domain; Secretion of protein products occurs by a number of different ...
2042-2307 2.18e-26

Autotransporter beta-domain; Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type IV pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different peptidase is used and in some cases no cleavage occurs.


Pssm-ID: 214872 [Multi-domain]  Cd Length: 268  Bit Score: 110.74  E-value: 2.18e-26
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  2042 AGGHNAWRDSSGQLKTQSNRYVMQVGGDVARWSGDgldRWHLGVMAGYGHNSSNTRSSstGYRSDGSVNGYSAGVYATWY 2121
Cdd:smart00869    6 GFLRQDSSGSGGSAGFDYDSYGLQLGADYRLSDNG---NLSLGFAAGYGNSKVDFSGN--KGSGKGDVDSYGLGLYAGYS 80
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  2122 ANDethqGAYLDSWAQYSWFNNSVK------GQDIQSESYKSKGITGSLELGYTHKLGEFagskgskneWFIQPQAQAIW 2195
Cdd:smart00869   81 LGN----GLYLDAQLGYGRSDNDTKrkvtlgGAGRAKGSYDGTGYGASLEAGYRFYLGGG---------LTLTPFAGLAY 147
                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  2196 MGVEADDHRESNGT----RISGEGDGNVQTRLGVRTFLkghsAIDEGKAREFQPFVEVNWLHNTRDFGTK---------M 2262
Cdd:smart00869  148 SRVRQDGFTESGGGafglSVDSQSLDSLSLPLGLRLEY----RLALGDGATLTPYLRLAYVHDFYDDNPVvtasllgsgA 223
                           250       260       270       280
                    ....*....|....*....|....*....|....*....|....*
gi 1438035728  2263 DGVSIRQEGARNLGEIKTGVEGQINPQLNVWGNVGVQLGDKGYND 2307
Cdd:smart00869  224 SFTTSGTDLDRNAAELGLGLSAKLSNGLSLSLNYDGEFGGSSRSH 268
AC_1 pfam18883
Autochaperone Domain Type 1; This entry represents the autochaperone domain of type 1 (AC-1) ...
1855-1961 6.49e-26

Autochaperone Domain Type 1; This entry represents the autochaperone domain of type 1 (AC-1) in the Type Va Secretion System (T5aSS). Autotransporters (ATs) belong to a family of modular proteins secreted by the Type V, subtype a, secretion system (T5aSS) and considered as an important source of virulence factors in lipopolysaccharidic diderm bacteria (archetypical Gram-negative bacteria). The AC of type 1 with beta-fold appears as a prevalent and conserved structural element exclusively associated to beta-helical AT passenger.


Pssm-ID: 465898 [Multi-domain]  Cd Length: 114  Bit Score: 104.23  E-value: 6.49e-26
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1855 GNLTNS-GDIWTGSKGKDAGNQLVVNGNYQGDGGHLHLNTALNDDNSVTDKLIVKGNT-SGTTGVSVTNAGGSGAQT-IN 1931
Cdd:pfam18883    4 TNLTNDnSTINFTAPSGASYKTLTVDGDYTGNDGTLALNTYLGGDGSPSDKLVIDGGTaSGTTNLRINNTGGPGALTtND 83
                           90       100       110
                   ....*....|....*....|....*....|.
gi 1438035728 1932 GIEVIHVDGQ-SDGEFTQDGRIVAGAYDYSL 1961
Cdd:pfam18883   84 GILVVDVGGTtSDGAFRLAGRAVAGPYEYLL 114
PRK15319 PRK15319
fibronectin-binding autotransporter adhesin ShdA;
730-1929 4.25e-21

fibronectin-binding autotransporter adhesin ShdA;


Pssm-ID: 185219 [Multi-domain]  Cd Length: 2039  Bit Score: 102.08  E-value: 4.25e-21
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  730 NAASSVQDASTQNATLYRVDGGASFY--GSADSSAQLNASGDGATIIRTTGAGSHFDSGKLALSvtgtgaTGIRIEGGAT 807
Cdd:PRK15319    72 DAQTHVLDASTPPISYSGTDEGAALYvsGVATVGWQPTTVTGTGLVIETSGGGADDPDGGKYVS------NAISLDHYAI 145
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  808 GEITSdavivrvaGKDTTAGIVDGNYYNLDGSvndaqkgdsvltSYAVLETANTADGAFGYIARNGGRlihEGSIDFTAD 887
Cdd:PRK15319   146 LELTD--------AKITTTGIYTQGISAADGS------------TLTLTDSTLTIDGNFGVMTLYTGS---EATLDGTIV 202
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  888 NSTGilvdggilENHSDVTvngvavniQGANSEVTNSGVVTATDGQAAYLVGNNATLA---LNGNGETRAAGTAHGILLD 964
Cdd:PRK15319   203 EAAN--------SSSAQVQ--------QGSTLNVLDGSTITLAQGQINVVAGNTATDEgstLNLSDSSVSSAGTMSTIQG 266
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  965 TGAKGLTVDGATITMDSAGSGNAIENKAAISGIQLKNTTinvGNGVGVHTGASMAQTNSGTININGSGTGILFENVADGS 1044
Cdd:PRK15319   267 TNKAALNLTNATITHTNASGAAVQANNATTLDISGGNIT---SAGTGVYILASDARIDGATINADGDGIFITSKRKLTGY 343
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1045 DTDQTLDMSDSrdlviNVNGAQgngiitrASTDLKTGASVNvldsdgkSALVVQGTTKNVEQSGKLtsvsDKAAVVDLNN 1124
Cdd:PRK15319   344 EDLNALTVSDA-----NVTSDT-------VALHVDGSTTIN-------DPIELTDSTFTAPTAIKL----GSKATIQAEN 400
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1125 GVLesfinKGDILALDASHTALEMnsgngitftnASGANIVGQVNLLNGDNTVILESGSTATDITSGSG--KDNFILKNI 1202
Cdd:PRK15319   401 TTL-----TGNIVQTDASSSSLSL----------SQGSTLTGSVDAMFTTLSLDDTSQWNMTDPSTVGNltNDGDITLGN 465
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1203 SENESGSLFTSlnggsgDDTLQLENSSYTLTRADAINGMEHIALANnsvftldnvalglgddeldgagtgYTIDGSSQLS 1282
Cdd:PRK15319   466 ASGSTGTLLTV------DNTLTLQDGSQINATLDTANSSPIIKAAN------------------------VTLDGTLNLS 515
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1283 IKNT-----ADVTFKSHLAGTGVVAVDTANNHFNFDANNAA-----DGFAGTLALTNSRFELD-GLNTQALSNATLQAGN 1351
Cdd:PRK15319   516 STATfvapeTDEHFGSITLIDSQTAITTDFDSVTLDADTSAmpdylTINAGVDANDNTNYELStGLSWYAGANSARAAHG 595
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1352 GSITHVGSGEQNIGGLDFKGGTVQFDGvtpgnpTALGTIHAGAMDLSGRGtvqvdsgtvsNDRPQADTHRPILEQDDAQA 1431
Cdd:PRK15319   596 TFTVDAGSTFTVTSELDETTATSNWNG------SKLTKQGDGTLILSNTG----------NDYGDTEIDGGILAAKDAAA 659
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1432 LiklatsdtavqgGAGNLVLKDKDGNVISD-SITADIAQNGVVVAKGTYDYRLTGGDSDDGLYVSYGLTqvdLLGKDADA 1510
Cdd:PRK15319   660 L------------GTGDVTIAESATLALSQgTLDNNVTGEGQIVKSGSDELIVTGDNNYSGGTTISGGT---LTADHADS 724
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1511 LILDANGKSG----NAADLSARVTGSGDLAFDSQKGQTVTlsnMDNDYSGVTDVRSGNLAMlndnvlgntrelklagdtg 1586
Cdd:PRK15319   725 LGSGDVDNSGvlkvGEGELENILSGSGSLVKTGTGELTLS---GDNTYSGGTTITGGTLTA------------------- 782
                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1587 fdmrGHSQTIGKLTAESGSLTDLNGGHLTLTNGGEASGVLTGDGELTVAGGTlnvsgantGLKATTTIAqGATAVLDNTL 1666
Cdd:PRK15319   783 ----DHADSLGSGDIDNSGVLKVGEGDLENTLSGSGSLVKTGTGELTLSGGN--------DYSGGTTII-GGTLTADHAD 849
                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1667 GLGTGDIVAAGLLNLSNatGVLYNSISDAGK-VALDASDVVLAGNNSHFAGTfdIDNDSTLTASSAQQLGTSAIQNAGKF 1745
Cdd:PRK15319   850 SLGSGDIDNSGVLQVGE--GELKNTLFGSGSlVKTGTGELTLNGDNDYSGGT--TIDDGVLIADHADSLGTGAVANSGVL 925
                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1746 VLNTHEnwsLENGVTGSGSVVKNGSGNVTLSDSAQWTGATDINAGGLTLGSADNAFTlashqvnigkdgrlsgfggvaGN 1825
Cdd:PRK15319   926 QVGEGE---LKNTLSGSGSLVKTGTGELTLSGDNSYSGGTTIIGGTLIADHADSLGT---------------------GA 981
                         1130      1140      1150      1160      1170      1180      1190      1200
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1826 MANQGTLLIGDDVSAARRAVSSPVSFTVGGNLTNSGD-IWTGSKGKDAGNQLVVNGNYQGDGGHLHLNTALNDDNSVTDK 1904
Cdd:PRK15319   982 VANSGVLQVGEGELENTLSGSGSLVKTGTGELTLGGDnSYSGDTTIADGTLIAANVNALGSGNIDNSGTLMLDANGAFEL 1061
                         1210      1220
                   ....*....|....*....|....*
gi 1438035728 1905 LIVKGNTSGTTGVSVTNAGGSGAQT 1929
Cdd:PRK15319  1062 ANITTHSGATTALAAGSTLDAGQLT 1086
PRK15319 PRK15319
fibronectin-binding autotransporter adhesin ShdA;
1637-1970 1.21e-11

fibronectin-binding autotransporter adhesin ShdA;


Pssm-ID: 185219 [Multi-domain]  Cd Length: 2039  Bit Score: 70.88  E-value: 1.21e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1637 GTLNVSgaNTGLKATTTIAQGATAVLDNTLGLGTGDIVAAGLLNLSNATGVLYNSISDAGKVALDASD-VVLAGNNSHFA 1715
Cdd:PRK15319   631 GTLILS--NTGNDYGDTEIDGGILAAKDAAALGTGDVTIAESATLALSQGTLDNNVTGEGQIVKSGSDeLIVTGDNNYSG 708
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1716 GTfdIDNDSTLTASSAQQLGTSAIQNAGKFVLNTHEnwsLENGVTGSGSVVKNGSGNVTLSDSAQWTGATDINAGGLTlg 1795
Cdd:PRK15319   709 GT--TISGGTLTADHADSLGSGDVDNSGVLKVGEGE---LENILSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTLT-- 781
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1796 sADNAFTLAShqvnigkdgrlsgfggvaGNMANQGTLLIGDDVSAARRAVSSPVSFTVGGNLTNSGD-IWTGSKGKDAGN 1874
Cdd:PRK15319   782 -ADHADSLGS------------------GDIDNSGVLKVGEGDLENTLSGSGSLVKTGTGELTLSGGnDYSGGTTIIGGT 842
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1875 QLVVNGNYQGDGGHLHLNTALNDDNSVTDKLIVKGNTSGTtgvsvtnagGSGAQTINGievihvDGQSDGEFTQDGRIVA 1954
Cdd:PRK15319   843 LTADHADSLGSGDIDNSGVLQVGEGELKNTLFGSGSLVKT---------GTGELTLNG------DNDYSGGTTIDDGVLI 907
                          330
                   ....*....|....*.
gi 1438035728 1955 GAYDYSLARGQGDNNG 1970
Cdd:PRK15319   908 ADHADSLGTGAVANSG 923
ESPR pfam13018
Extended Signal Peptide of Type V secretion system; This conserved domain is called ESPR for ...
1-50 5.17e-11

Extended Signal Peptide of Type V secretion system; This conserved domain is called ESPR for Extended Signal Peptide Region. It is present at the N-terminus of the signal peptides of proteins belonging to the Type V secretion systems, including the autotransporters (T5aSS), TpsA exoproteins of the two-partner system (T5bSS) and trimeric autotransporters (TAAs). So far, the ESPR is present only in Gram-negative bacterial proteins originating from the classes Beta- and Gamma-proteobacteria. ESPR severely impairs inner membrane translocation, suggesting that it adopts a particular conformation or it interacts with a cytoplasmic or inner membrane co-factor, prior to exportation. Deletion of ESPR causes mis-folding of the TAAs passenger domain in the periplasm, substantially impairing its translocation across the outer membrane.


Pssm-ID: 463773 [Multi-domain]  Cd Length: 50  Bit Score: 59.47  E-value: 5.17e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 1438035728    1 MNKVFKVIWNSRLNIFVVASELARGYCKSTAGNTSFGSLLKYPLMSALAV 50
Cdd:pfam13018    1 MNKIYRVIWNRARGAWVVVSELAKSKGKSSSSSSGSAAALAALLLLLLAA 50
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
1436-2318 1.42e-08

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 60.56  E-value: 1.42e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1436 ATSDTAVQGGAGNLVLKDKDGNVISDSITADIAQNGVVVAKGTYDYRLTGGDSDDGLYVSYGLTQVDLLGKDADALILDA 1515
Cdd:COG4625      6 GGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGG 85
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1516 NGKSGNAADLSARVTGSGDLAFDSQKGQTVTLSNMDNDYSGVTDVRSGNLAMLNDNVLGNTRELKLAGDTGFDMRGHSQT 1595
Cdd:COG4625     86 GGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGG 165
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1596 IGKLTAESGSLTDLNGGHLTLTNGGEASGVLTGDGELTVAGGTLNVSGANTGLKATTTIAQGATAVLDNTLGLGTGDIVA 1675
Cdd:COG4625    166 GGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 245
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1676 AGLLNLSNATGVLYNSISDAGKVALDASDVVLAGNNSHFAGTFDIDNDSTLTASSAQQLGTSAIQNAGKFVLNTHENWSL 1755
Cdd:COG4625    246 GGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 325
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1756 ENGVTGSGSVVKNGSGNVTLSDSAQWTGATDINAGGLTLGSADNAFTLASHQVNIGKDGRLSGFGGVAGNMANQGTLLIG 1835
Cdd:COG4625    326 GGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGA 405
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1836 DDVSAARRAVSSPVSFTVGGNLTNSGDIWTGSKGKDAGNQLVVNGNYQGDGGHLHLNTALNDDNSVTDKLIVKGNTSGTT 1915
Cdd:COG4625    406 GGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTYT 485
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1916 GVSVTNAGGSGAQTINGIEVIHVDGQSDGEFT-------QDGRIVAGAYDYSLARGQGDNNGNWYLTSHKTDPNPGP--- 1985
Cdd:COG4625    486 GTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVvtgtatlNGGTVVVLAGGYAPGTTYTILAVAAALDALAGNGDLSAlyn 565
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1986 --GPKPEPDIRP--------EPGSWTANLAAANTLFVTRLHDRLGETQYIDALTGE-KKVTSMWMRQAGGHNAWRDSSGQ 2054
Cdd:COG4625    566 alAALDAAAARAaldqlsgeIHASAAAALLQASRALRDALSNRLRALRGAGAAGDAaAEGWGVWAQGFGSWGDQDGDGGA 645
                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2055 LKTQSNRYVMQVGGDVARwsgdgLDRWHLGVMAGYGHNSSNTRssstGYRSDGSVNGYSAGVYATWYANdethqGAYLDS 2134
Cdd:COG4625    646 AGYDSSTGGLLVGADYRL-----GDNWRLGVALGYSRSDVDVD----DRGSSGDSDSYHLGLYGGYQFG-----ALYLDG 711
                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2135 WAQYSWFNNSVK-------GQDIQSESYKSKGITGSLELGYTHKLGefagskgsknEWFIQPQAQAIWMGVEADDHRESN 2207
Cdd:COG4625    712 GLGYGWNDYDTDrtiafggLSRTATADYDGDTASAFLEAGYRFDLG----------GLTLTPFAGLAYVRLRTDGFTETG 781
                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2208 GT---RISGEGDGNVQTRLGVRtflkGHSAIDEGKAREFQPFVEVNWLHNTRDFGTKMDGVSIRQEG----------ARN 2274
Cdd:COG4625    782 GAaalSVDSQSTDSLRSTLGLR----ASRTFSLGGGVTLTPSGRLGWRHEFGDDDPSTTASFAGAPGaaftvagaplARD 857
                          890       900       910       920
                   ....*....|....*....|....*....|....*....|....
gi 1438035728 2275 LGEIKTGVEGQINPQLNVWGNVGVQLGDkGYNDTSAMIGIKYNF 2318
Cdd:COG4625    858 ALVLGAGLSARLSDGLSLGLGYDGEFGS-GYTDHGGSAGLRYRF 900
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
554-983 2.70e-07

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 56.11  E-value: 2.70e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  554 GNGTYNGSDTSQIIIGSKVQNATAIDVGGNATLDQKGSININGAVTGESVSSNIGIIARAGTqaakvvhdgiINLNGLNS 633
Cdd:COG3468      2 ASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGA----------GGGGGGAG 71
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  634 TGIQVLENGQITSSGTININGGLDPVTHYANYGIYVQGEKALAILSGTVNLSGDGAIGVHARDKGEIDVTENGTVNFKDG 713
Cdd:COG3468     72 SGGGLAGAGSGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGG 151
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  714 VNQTGYYIFGAGSTIKNAASSVQDAsTQNATLYRVDGGASFYGSADSSAQLNASGDGATIIRTTGAGSHFDSGKLALSVT 793
Cdd:COG3468    152 TGAAAAGGGTGSGGGGSGGGGGAGG-GGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGS 230
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  794 GTGATGIRIEGGATGEITSDAVIVRVAGKDTTAGIVDGNYYNLDGSVNDAQKGDSVLTSYAVLETANTADGAFGYIARNG 873
Cdd:COG3468    231 GGNTGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGG 310
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  874 GRLIHEGSIDFTADNSTGILVDGGILENHSDVTVNGVAVNIQGANSEVTNSGVVTATDGQAAYLVGNNATLALNGNGETR 953
Cdd:COG3468    311 GNGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDG 390
                          410       420       430
                   ....*....|....*....|....*....|
gi 1438035728  954 AAGTAHGILLDTGAKGLTVDGATITMDSAG 983
Cdd:COG3468    391 VGTGLTTGGTGNNGGGGVGGGGGGGLTLTG 420
auto_BafA_Cterm NF040482
BafA family autotransporter C-terminal domain; BafA from both Bartonella henselae and ...
1888-2318 2.74e-07

BafA family autotransporter C-terminal domain; BafA from both Bartonella henselae and Bartonella quintana, and possibly all Bartonella BafA, are mitogenic autotransporter virulence factors that help induce vasoproliferative lesions during infection. This HMM represents the more conserved C-terminal portion only, as the passenger region is more highly variable in length and sequence.


Pssm-ID: 468508 [Multi-domain]  Cd Length: 617  Bit Score: 55.80  E-value: 2.74e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1888 HLHLNTALNDDNSvtDKLIVKgNTSGTTGVSVTNAG----GSGAQTINGIevihVDGQSDGEFTQDGR-------IVAGA 1956
Cdd:NF040482   199 HFKFNTSIAGNRG--DYLFIE-NGKGNHTISVADSGveitDPFSNKRDLI----TDQSGGANFTLTNLsgekinaVDGGT 271
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1957 YDYSLARGQGDNNGNWYLTSHKTDPNPGPGPKPEPDIRPEPGSWTANLAAANTLFVTRLHDRLGETQYIDA----LTGEK 2032
Cdd:NF040482   272 YMYGLKQRKDENGKIWYLSADRISGQESSSPDPSEPLSVSDFLTTPSTDAVLSMAVAPGLIFNNELQTVRTgrgiLDRNK 351
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2033 KVTSMWM-------RQAGGHNawrdssgQLKTQSNRYVMQVggdvarwsgDGLDRWHLG--VMAGYGHNSSNTRSSSTGY 2103
Cdd:NF040482   352 KNTALWTyaikskeRIATGHT-------HFKLEQTGIVLGA---------DGLSELTHGdlYIGGFGSYDQARIAHARGG 415
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2104 RSDgsVNGYSAGVYATWYandeTHQGAYLDSWAQYSWFNNSVK-----GQDIQSEsYKSKGITGSLELGYTHKLGefags 2178
Cdd:NF040482   416 VSD--INTYSIGAYATYF----DHRGWYLDGILKYNYYQNNLKavstnGLAIQGD-YNQWAIGTSFEAGYRFETA----- 483
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2179 kgsKNEWfIQPQAQAIWMGVEADDHRESNGTRisgeGDGN----VQTRLGVRTflkGHSAIDEGKArEFQPFVEVNWLHN 2254
Cdd:NF040482   484 ---QNTW-MQPYGQLTWLQVEGKKIKLSNGMT----GDISpstsLRSEVGLSA---GHEFIVGAET-SLTAYITAAWLRE 551
                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1438035728 2255 TRD-----------FGTKMDGvsirqegarNLGEIKTGVEGQINPQLNVWGNVGVQLGDKGYNDTSAMIGIKYNF 2318
Cdd:NF040482   552 NIDnnhttinkqhkFITDLSG---------NAGKLGIGLNSFVSDKLTLYAEAHYLKGHKIKQSLQGILGLRYSF 617
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
549-1065 3.48e-07

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 55.94  E-value: 3.48e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  549 GVHLYGNGTYNGSDTSQIIIGSKVQNATAIDVGGNATLDQKGSININGAVTGESVSSNIGIIARAGTQAAKVVHDGIINL 628
Cdd:COG4625      5 GGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGG 84
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  629 NGLNSTGIQVLENGQITSSGTININGGLDPVTHYANYGIYVQGEKALAILSGTVNLSGDGAIGVHARDKGEIDVTENGTV 708
Cdd:COG4625     85 GGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGG 164
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  709 NFKDGVNQTGYYIFGAGSTIKNAASSVQDASTQNATLYRVDGGASFYGSADSSAQLNASGDGATIIRTTGAGSHFDSGKL 788
Cdd:COG4625    165 GGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 244
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  789 ALSVTGTGATGIRIEGGATGEITSDAVIVRVAGKDTTAGIVDGNYYNLDGSVNDAQKGDSVLTSYAVLETANTADGAFGY 868
Cdd:COG4625    245 GGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 324
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  869 IARNGGRLIHEGSIDFTADNSTGILVDGGILENHSDVTVNGVAVNIQGANSEVTNSGVVTATDGQAAYLVGNNATLALNG 948
Cdd:COG4625    325 GGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGG 404
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  949 NGETRAAGTAHGILLDTGAKGLTVDGATITMDSAGSGNAIENKAAISGIQLKNTTINVGNGVGVHTGASMAQTNSGTINI 1028
Cdd:COG4625    405 AGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTY 484
                          490       500       510
                   ....*....|....*....|....*....|....*..
gi 1438035728 1029 NGSGTGILFENVADGSDTDQTLDMSDSRDLVINVNGA 1065
Cdd:COG4625    485 TGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGT 521
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
421-919 3.57e-07

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 55.94  E-value: 3.57e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  421 AGTNPEMADFFSSGAAGVAQGAHTAILANGSSVINNNSSGVINVAARGNYYGNTGVLMSGNATLNNDGAINIAASNEANS 500
Cdd:COG4625      4 GGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGG 83
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  501 ILGNGANIGVVTQQNTTFNNRGTLYIGRLAQRAPDDANTDIAIKQQSIGVHLYGNGTYNGSDTSQIIIGSKVQNATAIDV 580
Cdd:COG4625     84 GGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGG 163
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  581 GGNATLDQKGSININGAVTGESVSSNIGIIARAGTQAAKVVHDGIINLNGLNSTGIQVLENGQITSSGTININGGLDPVT 660
Cdd:COG4625    164 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 243
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  661 HYANYGIYVQGEKALAILSGTVNLSGDGAIGVHARDKGEIDVTENGTVNFKDGVNQTGYYIFGAGSTIKNAASSVQDAST 740
Cdd:COG4625    244 GGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 323
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  741 QNATLYRVDGGASFYGSADSSAQLNASGDGATIIRTTGAGSHFDSGKLALSVTGTGATGIRIEGGATGEITSDAVIVRVA 820
Cdd:COG4625    324 GGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGG 403
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  821 GKDTTAGIVDGNYYNLDGSVNDAQKGDSVLTSYAVLETANTADGAFGYIARNGGRLIHEGSIDFTADNSTGILVDGGILE 900
Cdd:COG4625    404 GAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNT 483
                          490
                   ....*....|....*....
gi 1438035728  901 NHSDVTVNGVAVNIQGANS 919
Cdd:COG4625    484 YTGTTTVNGGGNYTQSAGS 502
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
603-1034 6.58e-07

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 54.95  E-value: 6.58e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  603 VSSNIGIIARAGTQAAKVVHDGIINLNGLNSTGIQVLENGQITSSGTININGGLDPVTHYANYGIYVQGekALAILSGTV 682
Cdd:COG3468      1 TASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGG--AGSGGGLAG 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  683 NLSGDGAIGVHARDKGEIDVTENGTVNFKDGVNQTGYYIFGAGSTIKNAASSVQDASTQNATLYRVDGGASFYGSADSSA 762
Cdd:COG3468     79 AGSGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAG 158
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  763 QLNASGDGATIIRTTGAGSHFDSGKLALSVTGTGATGIRIEGGATGEITSDAVIVRVAGKDTTAGIVDGN--YYNLDGSV 840
Cdd:COG3468    159 GGTGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAgsGGNTGGGV 238
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  841 NDAQKGDSVLTSYAVLETANTADGAFGYIARNGGRLIHEGSIDFTADNSTGILVDGGILENHSDVTVNGVAVNIQGANSE 920
Cdd:COG3468    239 GGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGG 318
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  921 VTN-SGVVTATDGQAAYLVGNNATLALNGNGETRAAGTAHGILLDTGAKGLTVDGATITMDSAGSGNAIENKAAISGIQL 999
Cdd:COG3468    319 GSNaGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTG 398
                          410       420       430
                   ....*....|....*....|....*....|....*
gi 1438035728 1000 KNTTINVGNGVGVHTGASMAQTNSGTININGSGTG 1034
Cdd:COG3468    399 GTGNNGGGGVGGGGGGGLTLTGGTLTVNGNYTGNN 433
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
742-1166 1.13e-06

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 54.18  E-value: 1.13e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  742 NATLYRVDGGASFYGSADSSAQLNASGDGATIIRTTGAGSHFDSGKLALSVTGTGATGIRIEGGATGEITSDAVIVRVAG 821
Cdd:COG3468      2 ASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGS 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  822 KDTTAGIVDGNYYNLDGSVNDAQKGDSVLTSYAVLETANTADGAFGYIARNGGRLIHEGSIDFTADNSTGILVDGGILEN 901
Cdd:COG3468     82 GGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGT 161
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  902 HSDVTVNGVAVNIQGA-NSEVTNSGVVTATDGQAAYLVGNNATLALNGNGETRAAGTAHGILLDTGAKGLTVDGATITMD 980
Cdd:COG3468    162 GSGGGGSGGGGGAGGGgGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGG 241
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  981 SAGSGNAIENKAAISGIQLKNTTINVGNGVGVHTGASMAQTNSGTININGSGTGILFENVADGSDTDQTLDMSDSRDLVI 1060
Cdd:COG3468    242 GGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSN 321
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1061 NVNGAQGNGIITRASTDLKTGASVNVLDSDGKSALVVQGTTKNVEQSGKLTSVSDKAAVVDLNNGVLESFINKGDILALD 1140
Cdd:COG3468    322 AGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTG 401
                          410       420
                   ....*....|....*....|....*.
gi 1438035728 1141 ASHTALEMNSGNGITFTNASGANIVG 1166
Cdd:COG3468    402 NNGGGGVGGGGGGGLTLTGGTLTVNG 427
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
347-821 1.99e-06

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 53.41  E-value: 1.99e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  347 AVSYIHGVGSGTNVVIDKDANIQLVGSDATVVNLENGARLTNNGTLGTAGNTYRGAYIIAARNTSFVDNNGVIDAGTNPE 426
Cdd:COG3468      1 TASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAG 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  427 MADFFSSGAAGVAQGAHTAILANGSSVINNNSSGVINVAARGNYYGNTGVLMSGNATLNNDGAINIAASNEANSILGNGA 506
Cdd:COG3468     81 SGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGG 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  507 NIGVVTQQNTTFNNRGTLYIGRLAQRAPDDANTDIAIKQQSIGVHLYGNGTYNGSDTSQIIIGSKVQNATAIDVGGNATL 586
Cdd:COG3468    161 TGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGG 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  587 DQKGSININGAVTGESVSSNIGIIARAGTQAAKVVHDGIINLNGLNSTGIQVLENGQITSSGTININGGLDPVTHYANYG 666
Cdd:COG3468    241 GGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGS 320
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  667 IYVQGEKALAILSGTVNLSGDGAIGVHARDKGEIDVTENGTVNFKDGVNQTGYYIFGAGSTIKNAASSVQDASTQNATLY 746
Cdd:COG3468    321 NAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGT 400
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  747 RVDGGASFYGSADSSAQLNA---------SGDGATI-IRTTGAGSHFDSGKLALSVTGTGATGIRI--EGGATGEITSDA 814
Cdd:COG3468    401 GNNGGGGVGGGGGGGLTLTGgtltvngnyTGNNGTLvLNTVLGDDNSPTDRLVVNGNTSGTTGVRVnnAGGLGAQTVNGI 480

                   ....*..
gi 1438035728  815 VIVRVAG 821
Cdd:COG3468    481 EVVEVNG 487
YhjY COG5571
Uncharacterized conserved protein YhjY, contains autotransporter beta-barrel domain [General ...
1644-2318 2.91e-06

Uncharacterized conserved protein YhjY, contains autotransporter beta-barrel domain [General function prediction only];


Pssm-ID: 444313 [Multi-domain]  Cd Length: 648  Bit Score: 52.57  E-value: 2.91e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1644 ANTGLKATTTIAQGATAVLDNTLGLGTGDIVAAGLLNLSNATgvlynSISDAGKVALDASDVVLAGNNSHFAGTFDIDND 1723
Cdd:COG5571      5 SAAGSLGYLASASSNAATAPGLAAATASAAGAAGLGAASTAS-----SLSGASLALLAAQALGAGLSGTNGFSGGAGSSS 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1724 STLTASSAQQLGTSAIQNAGKFVLNTHENWSleNGVTGSGSVVKNGSGNVTLSDSAQWTGATDINAGGLTLGSADNAFTL 1803
Cdd:COG5571     80 GTGPTANGGLAGAGGVDLAGAGGGGGASGLA--GGAGGAGGTAAAGGAAAAGGGAAGNAATAAAAAAAGTALQLSGLTTA 157
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1804 ASHQVNIGKDGRLSGFGGVAGNMANQGTLLIGDDVSAARRAVSSPVSFTVGGNLTNSGDIWTGSKGK--DAGNQLVVNGN 1881
Cdd:COG5571    158 GAVGGVAGTAALNGATANTGLGAAAALAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAVLASPapAAGGAAAAAAG 237
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1882 YQGDGGHLHLNTALNDDNsvtdklivkgNTSGTTGVSVTNAGGSGAQTINGIEVIHVDGQSDGEFTQDGRIVAGAYDYSL 1961
Cdd:COG5571    238 AAAAAASAAANAATQANL----------LLLALALGSNGNAVGLNAVGLANEAAAPGAVGGDAGSTGATPSTLSSASCVA 307
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1962 ARGQGDNNGNWYLTSHKTDPNPGPGPKPEPDIRpepGSWTANLAAANTLFVTRLHDRLGETQYIDALTGEKKVTSMWMRQ 2041
Cdd:COG5571    308 SSLTAANANTLYAAADTAGPAGATAALAAAAAA---VLASAAAVAQAALALAAAGGQARSLAVAAGQGRGARGGQTRGGG 384
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2042 AGGHNAwRDSSGQLKTQSNRYVMQVGGDvARWSgdglDRWHLGVMAGYGHnssntRSSSTGYRSDGSVNGYSAGVYATWY 2121
Cdd:COG5571    385 GAGGTT-GGGVGAGGGDGDGPNLTLGVD-YRLS----DNLLLGAALSYGR-----QDLDFGDGGSYDARSTSLSLYAGYR 453
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2122 ANdethqGAYLDSWAQYSWFNNSVK-----GQDIQSESYKSKG--ITGSLELGYTHKLGefagskgsknEWFIQPQAQAI 2194
Cdd:COG5571    454 AG-----GLWVDADLSYGDLDYDIRrhirlGPATRTETGDTDGsqWGARLTAGYDFTAG----------RLRTGPFAGLD 518
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 2195 WMGVEADDHRESNGTRIS-GEGDGNVQT---RLGVRtfLKGHSAIDegkareFQPFVEVNWLHntrDFGTKMDGVSIR-- 2268
Cdd:COG5571    519 YQKVKVDGYTETGAGSTAlSFGDQDRDSlvgSLGWR--ADYQLLGR------FNPYAEVAYEH---EFGDDDRDVTAGla 587
                          650       660       670       680       690       700
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1438035728 2269 -----------QEGARNLGEIKTGVEGQINPQLNVWGNVGVQLGDKGYNDTSAMIGIKYNF 2318
Cdd:COG5571    588 slpagsfslpaAAPDKNWGRATLGASAALTNGVSLFAGYSGTFGRDDGRQTSVNLGLSARF 648
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
685-1241 1.03e-05

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 50.93  E-value: 1.03e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  685 SGDGAIGVHARDKGEIDVTENGTVNFKDGVNQTGYYIFGAGSTIKNAASSVQDASTQNATLYRVDGGASFYGSADSSAQL 764
Cdd:COG4625      2 GGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGG 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  765 NASGDGATIIRTTGAGSHFDSGKLALSVTGTGATGIRIEGGATGEITSDAVIVRVAGKDTTAGIVDGNYYNLDGSVNDAQ 844
Cdd:COG4625     82 GGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAG 161
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  845 KGDSVLTSYAVLETANTADGAFGYIARNGGRLIHEGSIDFTADNSTGILVDGGILENHSDVTVNGVAVNIQGANSEVTNS 924
Cdd:COG4625    162 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGG 241
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  925 GVVTATDGQAAYLVGNNATLALNGNGETRAAGTAHGILLDTGAKGLTVDGATITMDSAGSGNAIENKAAISGIQLKNTTI 1004
Cdd:COG4625    242 GGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 321
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1005 NVGNGVGVHTGASMAQTNSGTININGSGTGILFENVADGSDTDQTLDMSDSRDLVINVNGAQGNGIITRASTDLKTGASV 1084
Cdd:COG4625    322 GGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGG 401
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1085 NVLDSDGKSALVVQGTTKNVEQSGKLTSVSDKAAVVDL--NNGVLESFINKGDILALDASHTALEMNSGNGITFTNASGA 1162
Cdd:COG4625    402 GGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGagGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGN 481
                          490       500       510       520       530       540       550
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1438035728 1163 NIVGQVNLLNGDNTVILESGSTATDITSGSGKDNFILKNISENESGSLFTSLNGGSGDDTLQLENSSYTLTRADAINGM 1241
Cdd:COG4625    482 NTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGTATLNGGTVVVLAGGYAPGTTYTILAVAAALDALAGNGDL 560
PL1_Passenger_AT cd01343
Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 1, of ...
1762-1979 1.82e-05

Pertactin-like passenger domains (virulence factors), C-terminal, subgroup 1, of autotransporter proteins of the type V secretion system of Gram-negative bacteria. This subgroup includes the passenger domains of Neisseria and Haemophilus IgA1 proteases, SPATEs (serine protease autotransporters secreted by Enterobacteriaceae), Bordetella pertacins, and nonprotease autotransporters, TibA and similar AIDA-like proteins.


Pssm-ID: 238653 [Multi-domain]  Cd Length: 233  Bit Score: 48.51  E-value: 1.82e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1762 SGSVVKNGSGNVTLSDSAQWTGATDINAGGLTLG------SADNAFTLASHQVNigkdGRLSGFGGVAGNMANQGTLLIG 1835
Cdd:cd01343      7 GGNITAGDNAQLTLGGGALYGSSVTLTNGAVLDAgnanlsAAASYATLSGSNIR----GTVVLGAGQPLQALAELLLGGN 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1836 DDVSAARRAVSSPVSFTVGGNLTNSGD------------IWTGSKGKDAGNQLVVN---GNyqgdgGHLHLNTALNDDNS 1900
Cdd:cd01343     83 AAWTGAIQGLNATVSLNLNSVWTLTGDsnvnnltlnggtVDFNGPSAGKFNTLTVNtlsGN-----GTFVMRTDLAGGQG 157
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1901 vtDKLIVKGNTSGTTGVSVTNAGGSGAQTINgIEVIHVDGQSDGEFT-QDGRIVAGAYDYSLARgqgDNNGNWYLTSHKT 1979
Cdd:cd01343    158 --DKLVVTGSATGDFNLLVVNTGKEPTSGLN-LTLVSTPKGGDAEFTlANGTVDLGAYRYTLVK---DGNGNWTLTGPKK 231
Hia COG5295
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ...
723-1353 3.40e-05

Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 444098 [Multi-domain]  Cd Length: 785  Bit Score: 49.38  E-value: 3.40e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  723 GAGSTIKNAASSVQDASTQNATLYRVDGGASFYGSADSSAQLNASGDGATIIRTTGAGSHFDSGKLALSVTGTGATGIRI 802
Cdd:COG5295      7 AVAAGTALTTVASGASTTASGSSATVTSAAQSTGSAATSSGSSSAAGGSGSTSSLTAAAATAGAGSGGTSATAASSVASG 86
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  803 EGGATGEITSDAVIVRVAGKDTTAGIVDGNYYNLDGSVNDAQKGDSVLTSYAVLETANTADGAfGYIARNGGRLIHEGSI 882
Cdd:COG5295     87 GASAATAASTGTGNTAGTAATVAGAASSGSATNAGASAGASAAAAAGSTAAAGGAAASTGGSS-AAGGSNTATATGSSTA 165
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  883 DFTADNSTGILVDGGILENHSDVTVNGVAVNIQGANSEVTNSGVVTATDGQAAYLVGNNATLALNGNGETRAAGTAHGIL 962
Cdd:COG5295    166 NAATAAAGATSTSASGSSSGASGAAAASAATGASAGGTASAAASASSSATGTSASVGVNAGAATGSAASAGGSASAGAAS 245
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  963 LDTGAKGLTVDGATITMDSAGSGNAIENKAAISGIQLKNTTINVGNGVGVHTGASMAQTNSGTININGSGTGIlfENVAD 1042
Cdd:COG5295    246 GNATTASASSVSGSAVAAGTASTATTASTTAASGAAGTATAAAGGDAAAAGSASSTGAANATAGGGNAGSGGG--GAAAL 323
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1043 GSDTDQTLDMSDSRDLVINVNGAQGNGIITRASTDLKTGASVNVLDSDGKSALVVQGTTKNVEQSGKLTSVSDKAAVVDL 1122
Cdd:COG5295    324 GSAGGSSGVGTASGASAAAATNDGTANGAGTSAAADATSGGGAGGGGAAATSSSGGSATAAGNAAGAAGAGSAGSGGSST 403
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1123 NNGVLESFINKGDILALDASHTALEMNSGNGITFTNASGANIVGQVNLLNGDNTVILESGSTATDITSGSGKDNFILKNI 1202
Cdd:COG5295    404 GASAGGGASAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGGAANVGAATTAASAAATAAAATS 483
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1203 SENESGSLFTSLNGGSGDDTLQLENSSYTLTRADAINGmehialannsvfTLDNVALGLGDDELDGAGTGYTIDGSSQLS 1282
Cdd:COG5295    484 SAAIAGATATGAGAAAGGAGAGAAGGAGSAAAGGAANA------------AAASGATATAGSAGGGAAAAAGGGSTTAAT 551
                          570       580       590       600       610       620       630
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1438035728 1283 IKNTADVTFKSHLAGTGVVAVDTANNHFNFDANNAADGFAGTLALTNSRFELDGLNTQALSNATLQAGNGS 1353
Cdd:COG5295    552 GTNSVAVGNNTATGANSVALGAGSVASGANSVSVGAAGAENVAAGATDTDAVNGGGAVATGDNSVAVGNNA 622
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
320-867 6.15e-05

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 48.62  E-value: 6.15e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  320 DTSLHGIFADTGSIAADDAIRAFVNRDAVSYIHGVGSGTNVVIDKDANIQLVGSDATVVNLENGARLTNNGTLGTAGNTY 399
Cdd:COG4625     24 GGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGG 103
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  400 RGAYIIAARNTSFVDNNGVIDAGTNPEMADFFSSGAAGVAQGAHTAILANGSSVINNNSSGVINVAARGNYYGNTGVLMS 479
Cdd:COG4625    104 GGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGG 183
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  480 GNATLNNDGAINIAASNEANSILGNGANIGVVTQQNTTFNNRGTLYIGRLAQRAPDDANTDIAIKQQSIGVHLYGNGTYN 559
Cdd:COG4625    184 GGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGG 263
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  560 GSDTSQIIIGSKVQNATAIDVGGNATLDQKGSININGAVTGESVSSNIGIIARAGTQAAKVVHDGIINLNGLNSTGIQVL 639
Cdd:COG4625    264 AGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGA 343
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  640 ENGQITSSGTININGGLDPVTHYANYGIYVQGEKALAILSGTVNLSGDGAIGVHARDKGEIDVTENGTVNFKDGVNQTGY 719
Cdd:COG4625    344 GAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGG 423
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  720 YIFGAGSTIKNAASSVQDASTQNATLyrVDGGASFYGSADSSAQLNASGDGATIIRTTGAGshfdsgklalsvTGTGATG 799
Cdd:COG4625    424 GGGTGAGGGGGGGGTGAGGGGATGGG--GGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNN------------TYTGTTT 489
                          490       500       510       520       530       540
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1438035728  800 IRIEGGATGEITSdAVIVRVAGKDTTAGIVDGNYYNLDGSVNDAQKGDSVLTSYAVLETANTADGAFG 867
Cdd:COG4625    490 VNGGGNYTQSAGS-TLAVEVDAANSDRLVVTGTATLNGGTVVVLAGGYAPGTTYTILAVAAALDALAG 556
Hia COG5295
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ...
554-1186 9.88e-05

Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 444098 [Multi-domain]  Cd Length: 785  Bit Score: 47.84  E-value: 9.88e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  554 GNGTYNGSDTSQIIIGSKVQNATAIDVGGNATLDQKGSININGAVTGESVSSNIGIIARAGTQAAKVVHDGIINLNGLNS 633
Cdd:COG5295      9 AAGTALTTVASGASTTASGSSATVTSAAQSTGSAATSSGSSSAAGGSGSTSSLTAAAATAGAGSGGTSATAASSVASGGA 88
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  634 TGIQVLENGQITSSGTININGGLDPVTHYANYGIYVQGEKALAilsGTVNLSGDGAIGVHARDKGEIDVTENGTVNFKDG 713
Cdd:COG5295     89 SAATAASTGTGNTAGTAATVAGAASSGSATNAGASAGASAAAA---AGSTAAAGGAAASTGGSSAAGGSNTATATGSSTA 165
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  714 VNQTGYYIFGAGSTIKNAASSVQDASTQNATLYRVDGGASFYGSADSSAQLNASGDGATIIRTTGAGSHFDSGKLALSVT 793
Cdd:COG5295    166 NAATAAAGATSTSASGSSSGASGAAAASAATGASAGGTASAAASASSSATGTSASVGVNAGAATGSAASAGGSASAGAAS 245
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  794 GTGATGIRIEGGATGEITSDAVIVRVAGKDTTAGIVDGNYYNLDGSVNDAQKGDSVLTSYAVLETANTADGAFGYIARNG 873
Cdd:COG5295    246 GNATTASASSVSGSAVAAGTASTATTASTTAASGAAGTATAAAGGDAAAAGSASSTGAANATAGGGNAGSGGGGAAALGS 325
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  874 GRLIHEGSIDFTADNSTGILVDGGILENHSDVTVNGVAVNIQGANSEVTNSGVVTATDGQAAYLVGNNATLALNGNGETR 953
Cdd:COG5295    326 AGGSSGVGTASGASAAAATNDGTANGAGTSAAADATSGGGAGGGGAAATSSSGGSATAAGNAAGAAGAGSAGSGGSSTGA 405
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  954 AAGTAHGILLDTGAKGLTVDGATITMDSAGSGNAIENKAAISGIQLKNTTINVGNGVGVHTGASMAQTNSGTININGSGT 1033
Cdd:COG5295    406 SAGGGASAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGGAANVGAATTAASAAATAAAATSSA 485
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1034 GIlfeNVADGSDTDQTLDMSDSRDLVINVNGAQGNGIITRASTDLKTGASVNVLDSDGKSALVVQGTTKNVEQSGKLTSV 1113
Cdd:COG5295    486 AI---AGATATGAGAAAGGAGAGAAGGAGSAAAGGAANAAAASGATATAGSAGGGAAAAAGGGSTTAATGTNSVAVGNNT 562
                          570       580       590       600       610       620       630
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1438035728 1114 SDKAAVVDLNNGVLESFINKGDILALDASHTALEMNSGNGITFTNASganivgqvnlLNGDNTVILESGSTAT 1186
Cdd:COG5295    563 ATGANSVALGAGSVASGANSVSVGAAGAENVAAGATDTDAVNGGGAV----------ATGDNSVAVGNNAQAS 625
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
858-1351 1.05e-04

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 47.85  E-value: 1.05e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  858 TANTADGAFGYIARNGGRLIHEGSIDFTADNSTGILVDGGILENHSDVTVNGVAVNIQGANSEVTNSGVVTATDGQAAYL 937
Cdd:COG4625      2 GGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGG 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  938 VGNNATLALNGNGETRAAGTAHGILLDTGAKGLTVDGATITMDSAGSGNAIENKAAISGIQLKNTTINVGNGVGVHTGAS 1017
Cdd:COG4625     82 GGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAG 161
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1018 MAQTNSGTININGSGTGILFENVADGSDTDQTLDMSDSRDLVINVNGAQGNGIITRASTDLKTGASVNVLDSDGKSALVV 1097
Cdd:COG4625    162 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGG 241
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1098 QGTTKNVEQSGKLTSVSDKAAVVDLNNGVLESFINKGDILALDASHTALEMNSGNGITFTNASGANIVGQVNLLNGDNTV 1177
Cdd:COG4625    242 GGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 321
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1178 ILESGSTATDITSGSGKDNFILKNISENESGSLFTSLNGGSGDDTLQLENSSYTLTRADAINGMEHIALANNSVFTLDNV 1257
Cdd:COG4625    322 GGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGG 401
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1258 ALGLGDDELDGAGTGYTIDGSSQLSIKNTADVTFKSHLAGTGVVAVDTANNHFNFDANNAADGFAGTLALTNSRFELDGL 1337
Cdd:COG4625    402 GGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGN 481
                          490
                   ....*....|....
gi 1438035728 1338 NTQALSNATLQAGN 1351
Cdd:COG4625    482 NTYTGTTTVNGGGN 495
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
849-1360 1.94e-04

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 46.70  E-value: 1.94e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  849 VLTSYAVLETANTADGAFGYIARNGGRLIHEGSIDFTADNSTGILVDGGILENHSDVTVNGVAVNIQGANSEVTNSGVVT 928
Cdd:COG4625      1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  929 ATDGQAAYLVGNNATLALNGNGETRAAGTAHGILLDTGAKGLTVDGATITMDSAGSGNAIENKAAISGIQLKNTTINVGN 1008
Cdd:COG4625     81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1009 GVGVHTGASMAQTNSGTININGSGTGILFENVADGSDTDQTLDMSDSRDLVINVNGAQGNGIITRASTDLKTGASVNVLD 1088
Cdd:COG4625    161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1089 SDGKSALVVQGTTKNVEQSGKLTSVSDKAAVVDLNNGVLESFINKGDILALDASHTALEMNSGNGITFTNASGANIVGQV 1168
Cdd:COG4625    241 GGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 320
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1169 NLLNGDNTVILESGSTATDITSGSGKDNFILKNISENESGSLFTSLNGGSGDDTLQLENSSYTLTRADAINGMEHIALAN 1248
Cdd:COG4625    321 GGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGG 400
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1249 NSVFTLDNVALGLGDDELDGAGTGYTIDGSSQLSIKNTADVTFKSHLAGTGVVAVDTANNHFNFDANNAADGfAGTLALT 1328
Cdd:COG4625    401 GGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSG-AGTLTLT 479
                          490       500       510
                   ....*....|....*....|....*....|..
gi 1438035728 1329 NSRFELDGLNTQALSNATLQAGNGSITHVGSG 1360
Cdd:COG4625    480 GNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAA 511
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
1293-1791 2.06e-04

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 46.70  E-value: 2.06e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1293 SHLAGTGVVAVDTANNHFNFDANNAADGFAGTLALTNSRFELDGLNTQALSNATLQAGNGSITHVGSGEQNIGGLDFKGG 1372
Cdd:COG4625      2 GGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGG 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1373 TVQFDGVTPGNPTALGTIHAGAMDLSGRGTVQVDSGTVSNDRPQADTHRPILEQDDAQALIKLATSDTAVQGGAGNLVLK 1452
Cdd:COG4625     82 GGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAG 161
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1453 DKDGNVISDSITADIAQNGVVVAKGTYDYRLTGGDSDDGLYVSYGLTQVDLLGKDADALILDANGKSGNAADLSARVTGS 1532
Cdd:COG4625    162 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGG 241
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1533 GDLAFDSQKGQTVTLSNMDNDYSGVTDVRSGNLAMLNDNVLGNTRELKLAGDTGFDMRGHSQTIGKLTAESGSLTDLNGG 1612
Cdd:COG4625    242 GGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 321
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1613 HLTLTNGGEASGVLTGDGELTVAGGTLNVSGANTGLKATTTIAQGATAVLDNTLGLGTGDIVAAGLLNLSNATGVLYNSI 1692
Cdd:COG4625    322 GGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGG 401
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1693 SDAGKVALDASDVVLAGNNSHFAGTFDIDNDSTLTASSAQQLGTSAIQNAGKFVLNTHENWSLENGVTGSGSVVKNGSGN 1772
Cdd:COG4625    402 GGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGN 481
                          490
                   ....*....|....*....
gi 1438035728 1773 VTLsdsaqwTGATDINAGG 1791
Cdd:COG4625    482 NTY------TGTTTVNGGG 494
Pertactin pfam03212
Pertactin;
1898-1975 7.95e-04

Pertactin;


Pssm-ID: 460848 [Multi-domain]  Cd Length: 121  Bit Score: 41.23  E-value: 7.95e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1898 DNSVTDKLIVKGNTSGTTGVSVTNAGGSGAQTINGIEVIHvDGQSDGEFT---QDGRIVAGAYDYSLARgqgDNNGNWYL 1974
Cdd:pfam03212   44 ASGTGDQLVVSGNASGQHVLLVRNTGSEPASGNTKLTLVE-TGGGDAAFTlgnKGGKVDAGTYRYRLTA---DGNGNWSL 119

                   .
gi 1438035728 1975 T 1975
Cdd:pfam03212  120 T 120
Hia COG5295
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ...
454-1093 2.05e-03

Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 444098 [Multi-domain]  Cd Length: 785  Bit Score: 43.61  E-value: 2.05e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  454 INNNSSGVINVAARGNYYGNTGVLMSGNATLNNDGAINIAASNEANSILGNGANIGVVTQQNTTFNNRGTLYIGRLAQRA 533
Cdd:COG5295      1 SASNAGAVAAGTALTTVASGASTTASGSSATVTSAAQSTGSAATSSGSSSAAGGSGSTSSLTAAAATAGAGSGGTSATAA 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  534 PDDANTDIAIKQQSigvhlyGNGTYNGSDTSQIIIGSKVQNATAIDVGGNATLDQKGSININGAVTGESVSSNIGIIARA 613
Cdd:COG5295     81 SSVASGGASAATAA------STGTGNTAGTAATVAGAASSGSATNAGASAGASAAAAAGSTAAAGGAAASTGGSSAAGGS 154
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  614 GTQAAKVVHDGIINLNGLNSTGIQVLENGQITSSGTININGGLDPVTHYANYGIYVQGEKALAILSGTVNLSGDGAIGVH 693
Cdd:COG5295    155 NTATATGSSTANAATAAAGATSTSASGSSSGASGAAAASAATGASAGGTASAAASASSSATGTSASVGVNAGAATGSAAS 234
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  694 ARDKGEIDVTENGTVNFKDGVNQTGYYIFGAGSTIKNAASSVQDASTQNATLYRVDGGASFYGSADSSAQLNASGDGATI 773
Cdd:COG5295    235 AGGSASAGAASGNATTASASSVSGSAVAAGTASTATTASTTAASGAAGTATAAAGGDAAAAGSASSTGAANATAGGGNAG 314
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  774 IRTTGAGSHFDSGKLALSVTGTGATGIRIEGGATGEITSDAVIVRVAGKDTTAGIVDGNYYNLDGSVNDAQKGDSVLTSY 853
Cdd:COG5295    315 SGGGGAAALGSAGGSSGVGTASGASAAAATNDGTANGAGTSAAADATSGGGAGGGGAAATSSSGGSATAAGNAAGAAGAG 394
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  854 AVLETANTADGAFGYIARNGGRLIHEGSIDFTADNSTGILVDGGILENHSDVTVNGVAVNIQGANSEVTNSGVVTATDGQ 933
Cdd:COG5295    395 SAGSGGSSTGASAGGGASAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGGAANVGAATTAASA 474
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  934 AA----YLVGNNATLALNGNGETRAAGTAHGILLDTGAKGLTVDGATITMDSAGSGNAIENKAAISGIQLKNTTINVGNG 1009
Cdd:COG5295    475 AAtaaaATSSAAIAGATATGAGAAAGGAGAGAAGGAGSAAAGGAANAAAASGATATAGSAGGGAAAAAGGGSTTAATGTN 554
                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1010 VGVHTGASMAQTNSGTININGSGTGILFENVADGSDTDQTLDMSDSRDLVINVNGAQGNGIITRASTDLKTGASVNVLDS 1089
Cdd:COG5295    555 SVAVGNNTATGANSVALGAGSVASGANSVSVGAAGAENVAAGATDTDAVNGGGAVATGDNSVAVGNNAQASGANSVALGA 634

                   ....
gi 1438035728 1090 DGKS 1093
Cdd:COG5295    635 GATA 638
Hia COG5295
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ...
320-880 2.41e-03

Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 444098 [Multi-domain]  Cd Length: 785  Bit Score: 43.22  E-value: 2.41e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  320 DTSLHGIFADTGSIAADDAIRAFVNRDAVSYIHGVGSGTNVVIDKDANIQLVGSDATVVNLENGARLTNNGTLGTAGNTY 399
Cdd:COG5295     62 TAAAATAGAGSGGTSATAASSVASGGASAATAASTGTGNTAGTAATVAGAASSGSATNAGASAGASAAAAAGSTAAAGGA 141
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  400 RGAYIIAARNTSFVDNNGVIDAGTNPEMADFFSSGAAGVAQGAHTAILANGSSVINNNSSGVINVAARGNYYGNTGVLMS 479
Cdd:COG5295    142 AASTGGSSAAGGSNTATATGSSTANAATAAAGATSTSASGSSSGASGAAAASAATGASAGGTASAAASASSSATGTSASV 221
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  480 GNATLNNDGAINIAASNEANSILGNGANIGVVTQQNTTFNNRGTLYIGRLAQRAPDDANTDIAIKQQSIGVH-LYGNGTY 558
Cdd:COG5295    222 GVNAGAATGSAASAGGSASAGAASGNATTASASSVSGSAVAAGTASTATTASTTAASGAAGTATAAAGGDAAaAGSASST 301
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  559 NGSDTSQIIIGSKVQNATAIDVGGNATLDQKGSININGAVTGESVSSNIGIIARAGTQAAKVVHDGIINLNGLNSTGIQV 638
Cdd:COG5295    302 GAANATAGGGNAGSGGGGAAALGSAGGSSGVGTASGASAAAATNDGTANGAGTSAAADATSGGGAGGGGAAATSSSGGSA 381
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  639 LENGQITSSGTININGGLDPVTHYANYGIYVQGEKALAILSGTVNLSGDGAIGVHARDKGEIDVTENGTVNFKDGVNQTG 718
Cdd:COG5295    382 TAAGNAAGAAGAGSAGSGGSSTGASAGGGASAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGG 461
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  719 YYIFGAGSTIKNAASSVQDASTQNATLYRVDGGASFYGSADSSAQLNASGDGATIIRTTGAGSHFDSGKLALSVTGTGAT 798
Cdd:COG5295    462 AANVGAATTAASAAATAAAATSSAAIAGATATGAGAAAGGAGAGAAGGAGSAAAGGAANAAAASGATATAGSAGGGAAAA 541
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  799 GIRIEGGATGEITSDAVIVRVAGKDTTAGIVDGNYYNLDGSVNDAQKGdsvltsyavleTANTADGAFGYIARNGGRLIH 878
Cdd:COG5295    542 AGGGSTTAATGTNSVAVGNNTATGANSVALGAGSVASGANSVSVGAAG-----------AENVAAGATDTDAVNGGGAVA 610

                   ..
gi 1438035728  879 EG 880
Cdd:COG5295    611 TG 612
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
978-1451 5.52e-03

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 42.07  E-value: 5.52e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  978 TMDSAGSGNAIENKAAISGIQLKNTTINVGNGVGVHTGASMAQTNSGTININGSGTGILFENVADGSDTDQTLDMSDSRD 1057
Cdd:COG4625      2 GGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGG 81
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1058 LVINVNGAQGNGIITRASTDLKTGASVNVLDSDGKSALVVQGTTKNVEQSGKLTSVSDKAAVVDLNNGVLESFINKGDIL 1137
Cdd:COG4625     82 GGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAG 161
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1138 ALDASHTALEMNSGNGITFTNASGANIVGQVNLLNGDNTVILESGSTATDITSGSGKDNFILKNISENESGSLFTSLNGG 1217
Cdd:COG4625    162 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGG 241
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1218 SGDDTLQLENSSYTLTRADAINGMEHIALANNSVFTLDNVALGLGDDELDGA---GTGYTIDGSSQLSIKNTADVTFKSH 1294
Cdd:COG4625    242 GGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGgggGGGGGGGGGGGGGGGGGGGGGGGGG 321
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1295 LAGTGVVAVDTANNHFNFDANNAADGFAGTLALTNSRFELDGLNTQALSNATLQAGNGSITHVGSGEQNIGGLDFKGGTV 1374
Cdd:COG4625    322 GGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGG 401
                          410       420       430       440       450       460       470
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1438035728 1375 QFDGVTPGNPTALGTIHAGAMDLSGRGTVQVDSGTVSNDRPQADTHRPILEQDDAQALIKLATSDTAVQGGAGNLVL 1451
Cdd:COG4625    402 GGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTL 478
COG4625 COG4625
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ...
1227-1726 8.71e-03

Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];


Pssm-ID: 443664 [Multi-domain]  Cd Length: 900  Bit Score: 41.30  E-value: 8.71e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1227 NSSYTLTRADAINGMEHIALANNSVFTLDNVALGLGDDELDGAGTGYTIDGSSQLSIKNTADVTFKSHLAGTGVVAVDTA 1306
Cdd:COG4625      5 GGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGG 84
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1307 NNHFNFDANNAADGFAGTLALTNSRFELDGLNTQALSNATLQAGNGSITHVGSGEQNIGGLDFKGGTVQFDGVTPGNPTA 1386
Cdd:COG4625     85 GGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGG 164
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1387 LGTIHAGAMDLSGRGTVQVDSGTVSNDRPQADTHRPILEQDDAQALIKLATSDTAVQGGAGNLVLKDKDGNVISDSITAD 1466
Cdd:COG4625    165 GGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 244
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1467 IAQNGVVVAKGTYDYRLTGGDSDDGLYVSYGLTQVDLLGKDADALILDANGKSGNAADLSARVTGSGDLAFDSQKGQTVT 1546
Cdd:COG4625    245 GGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 324
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1547 LSNMDNDYSGVTDVRSGNLAMLNDNVLGNTRELKLAGDTGFDMRGHSQTIGKLTAESGSLTDLNGGHLTLTNGGEASGVL 1626
Cdd:COG4625    325 GGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGG 404
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728 1627 TGDGELTVAGGTLNVSGANTGLKATTTIAQGATAVLDNTLGLGTGDIVAAGLLNLSNATGVLYNSISDAGKVALDASDVV 1706
Cdd:COG4625    405 AGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTY 484
                          490       500
                   ....*....|....*....|
gi 1438035728 1707 LAGNNSHFAGTFDIDNDSTL 1726
Cdd:COG4625    485 TGTTTVNGGGNYTQSAGSTL 504
AidA COG3468
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ...
187-602 9.99e-03

Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442691 [Multi-domain]  Cd Length: 846  Bit Score: 41.09  E-value: 9.99e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  187 VGAGASLDVDVGQKTGNWVGAADNQFNVIMKSSVNTQNLSSAYHVTNGGSLNYQSKTVVQLGNSDNNIKDASNALAWMTA 266
Cdd:COG3468     21 GGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNSTGGGGGNSGTGG 100
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  267 ADFVGEFDSVIGKQNITNIDEFKAYNDALIQALQDGQIQLTEAQYADELNKARDTSLHGIFADTGSIAADDAIRAFVNRD 346
Cdd:COG3468    101 TGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGGGGSGGGGGAGGGGGG 180
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  347 AVSYIHGVGSGTNVVIDKDANIQLVGSDATVVNLeNGARLTNNGTLGTAGNTYRGAYIIAARNTSFVDNNGVIDAGTNPE 426
Cdd:COG3468    181 GAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGG-GGGGGGAGGATGGAGSGGNTGGGVGGGGGSAGGTGGGGLTGGGAA 259
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  427 MADFFSSGAAGVAQGAHTAILANGSSVINNNSSGVINVAARGNYYGNTGVLMSGNATLNNDGAINIAASNEANSILGNGA 506
Cdd:COG3468    260 GTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGGGSGGGGGGGGGGGGG 339
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1438035728  507 NIGVVTQQNTTFNNRGTLYIGRLAQRAPDDANTDIAIKQQSIGVHLYGNGTYNGSDTSQIIIGSKVQNATAIDVGGNATL 586
Cdd:COG3468    340 GTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGNNGGGGVGGGGGGGLTLT 419
                          410
                   ....*....|....*.
gi 1438035728  587 DqkGSININGAVTGES 602
Cdd:COG3468    420 G--GTLTVNGNYTGNN 433
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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