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Conserved domains on  [gi|1334588452|ref|WP_103065887|]
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MULTISPECIES: nucleotidyltransferase domain-containing protein [unclassified Petrotoga]

Protein Classification

nucleotidyltransferase domain-containing protein( domain architecture ID 16068202)

nucleotidyltransferase domain-containing protein similar to Methanocaldococcus jannaschii MJ1547, a HEPN (higher eukaryotes and prokaryotes nucleotide-binding) domain and a cognate MNT (minimal nucleotidyltransferase) domain-containing toxin-antitoxin system

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Polbeta pfam18765
Polymerase beta, Nucleotidyltransferase; A member of the nucleotidyltransferase fold found in ...
 9-115 1.25e-08

Polymerase beta, Nucleotidyltransferase; A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.


:

Pssm-ID: 465859  Cd Length: 93  Bit Score: 49.45  E-value: 1.25e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334588452   9 IKDLCKKY-KIGLVYLFGSQ-KEKAYqllkdnddnnikiddPLTDIDVGIVFLFDLDsikqrYKLYASIYNELEELFKPY 86
Cdd:pfam18765   3 IKEILKKNpEIEAAYLFGSRaKGDAR---------------EDSDIDLAVLYDEKLD-----FEELLELASELEDILLLR 62

                          90       100       110
                  ....*....|....*....|....*....|
gi 1334588452  87 KLDLVFLQETHSVFQTEALK-GICVYSESE 115
Cdd:pfam18765  63 KVDLVDLNKAPPVLAHQILKeGKLLYSRDE 92
 
Name Accession Description Interval E-value
Polbeta pfam18765
Polymerase beta, Nucleotidyltransferase; A member of the nucleotidyltransferase fold found in ...
 9-115 1.25e-08

Polymerase beta, Nucleotidyltransferase; A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.


Pssm-ID: 465859  Cd Length: 93  Bit Score: 49.45  E-value: 1.25e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334588452   9 IKDLCKKY-KIGLVYLFGSQ-KEKAYqllkdnddnnikiddPLTDIDVGIVFLFDLDsikqrYKLYASIYNELEELFKPY 86
Cdd:pfam18765   3 IKEILKKNpEIEAAYLFGSRaKGDAR---------------EDSDIDLAVLYDEKLD-----FEELLELASELEDILLLR 62

                          90       100       110
                  ....*....|....*....|....*....|
gi 1334588452  87 KLDLVFLQETHSVFQTEALK-GICVYSESE 115
Cdd:pfam18765  63 KVDLVDLNKAPPVLAHQILKeGKLLYSRDE 92
MJ0435 COG1669
Predicted nucleotidyltransferase MJ0435 [General function prediction only];
7-106 1.31e-05

Predicted nucleotidyltransferase MJ0435 [General function prediction only];


Pssm-ID: 441275  Cd Length: 96  Bit Score: 41.44  E-value: 1.31e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334588452   7 EFIKDLCKKYKIGLVYLFGSqkekayqLLKDNddnnikiDDPLTDIDVGIVFLFDLDSIKqryklYASIYNELEELFkPY 86
Cdd:COG1669    12 EVIEELAERYGVSRLGLFGS-------VARGE-------AREDSDIDLLVEFDEPTSLFD-----LFELEEELEELL-GR 71

                          90       100
                  ....*....|....*....|
gi 1334588452  87 KLDLVFLQETHSVFQTEALK 106
Cdd:COG1669    72 KVDLVTLDGLSPRLRERILK 91
 
Name Accession Description Interval E-value
Polbeta pfam18765
Polymerase beta, Nucleotidyltransferase; A member of the nucleotidyltransferase fold found in ...
 9-115 1.25e-08

Polymerase beta, Nucleotidyltransferase; A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.


Pssm-ID: 465859  Cd Length: 93  Bit Score: 49.45  E-value: 1.25e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334588452   9 IKDLCKKY-KIGLVYLFGSQ-KEKAYqllkdnddnnikiddPLTDIDVGIVFLFDLDsikqrYKLYASIYNELEELFKPY 86
Cdd:pfam18765   3 IKEILKKNpEIEAAYLFGSRaKGDAR---------------EDSDIDLAVLYDEKLD-----FEELLELASELEDILLLR 62

                          90       100       110
                  ....*....|....*....|....*....|
gi 1334588452  87 KLDLVFLQETHSVFQTEALK-GICVYSESE 115
Cdd:pfam18765  63 KVDLVDLNKAPPVLAHQILKeGKLLYSRDE 92
MJ0435 COG1669
Predicted nucleotidyltransferase MJ0435 [General function prediction only];
7-106 1.31e-05

Predicted nucleotidyltransferase MJ0435 [General function prediction only];


Pssm-ID: 441275  Cd Length: 96  Bit Score: 41.44  E-value: 1.31e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1334588452   7 EFIKDLCKKYKIGLVYLFGSqkekayqLLKDNddnnikiDDPLTDIDVGIVFLFDLDSIKqryklYASIYNELEELFkPY 86
Cdd:COG1669    12 EVIEELAERYGVSRLGLFGS-------VARGE-------AREDSDIDLLVEFDEPTSLFD-----LFELEEELEELL-GR 71

                          90       100
                  ....*....|....*....|
gi 1334588452  87 KLDLVFLQETHSVFQTEALK 106
Cdd:COG1669    72 KVDLVTLDGLSPRLRERILK 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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