|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11109 |
PRK11109 |
fused PTS fructose transporter subunit IIA/HPr protein; |
1-375 |
0e+00 |
|
fused PTS fructose transporter subunit IIA/HPr protein;
Pssm-ID: 236849 [Multi-domain] Cd Length: 375 Bit Score: 689.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 1 MFQLSVQDIHPGAQAGDKEEAIRQVAAALVQAGNVADGYVNGMLAREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVYQ 80
Cdd:PRK11109 1 MFQLSVQDIHLGQQAGNKEEAIRQVAAALTQAGNVAEGYVDGMLAREQQTSTFLGNGIAIPHGTTDTRDLVLKTGVQVFQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 81 FPQGVLWGDGQVAYVAIGIAASSDEHLGLLRQLTHVLSDDDVAEQLKSATTAEELRALLMGEKQSEALKLDNETLTLDVV 160
Cdd:PRK11109 81 FPQGVTWGDGQTAYVAIGIAAKSDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKFDTSLITLDVP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 161 ASDLVTLQALNAGRLKEAGAADATFVTRVINDKPLNLGQGIWLNDSAEGNLRSAIAVSRAANAFDVEGERAAMLVTVAMN 240
Cdd:PRK11109 161 ASDLLTLQALNAGRLKEAGAVDATFVAKVINSKPLNLGQGIWLSDSAEGNLRSAVAVSRAANAFEVDGEPVALLLTVAAA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 241 DEQPVSVLKRLGDLLLNNKAEKLLNADASTVLALLTSDDAPTEDVQTAEFVVRNEHGLHARPGTMLVNTIKQFESEITVA 320
Cdd:PRK11109 241 DDQPLAVLKRLSDLLLAQKADRLLSADAATLLALLTSEDAETDDVLSAEFVIRNEHGLHARPGAMLVNTIKQFNSEITVT 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1245906141 321 NLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEG 375
Cdd:PRK11109 321 NLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGEDAEQALKAIGEAIAAGLGEG 375
|
|
| MtlA2 |
COG4668 |
Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and ... |
1-142 |
1.52e-75 |
|
Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism];
Pssm-ID: 443705 [Multi-domain] Cd Length: 143 Bit Score: 230.05 E-value: 1.52e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 1 MFQLSVQDIHPGAQAGDKEEAIRQVAAALVQAGNVADGYVNGMLAREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVYQ 80
Cdd:COG4668 1 MLILTKENIRLNASAANKEEAIRLAGQLLVEAGYVEPEYIDAMLEREAQVSTYLGNGIAIPHGTNEAKDLVLKTGISVLQ 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1245906141 81 FPQGVLWGDGQVAYVAIGIAASSDEHLGLLRQLTHVLSDDDVAEQLKSATTAEELRALLMGE 142
Cdd:COG4668 81 FPDGVDWGDGNTVYLVIGIAAKSDEHLEILRQLARVLSDEENVEKLAKATDAEEILALLTGE 142
|
|
| PTS_IIA_fru |
cd00211 |
PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: ... |
4-139 |
6.78e-41 |
|
PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.
Pssm-ID: 238129 [Multi-domain] Cd Length: 136 Bit Score: 140.77 E-value: 6.78e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 4 LSVQDIHPGAQAGDKEEAIRQVAAALVQAGNVADGYVNGMLAREQQTSTFLGNGIAIPHGTTdtrDQVLKTGVQVYQFPQ 83
Cdd:cd00211 1 LTKENIRLNLKAKSKEEAIEELAQLLVAAGYVEEEYIEALLEREKEGSTGIGNGIAIPHAKS---EAVKKPGIAVLRLKE 77
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1245906141 84 GVLWG--DGQVAYVAIGIAA-SSDEHLGLLRQLTHVLSDDDVAEQLKSATTAEELRALL 139
Cdd:cd00211 78 PVDFGslDGQPVHLIFLLAApDSNEHLKALSQLARLLSDEEFVEQLLNAQSKEEILALL 136
|
|
| PTS_EIIA_2 |
pfam00359 |
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; |
4-139 |
2.06e-32 |
|
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2;
Pssm-ID: 459780 [Multi-domain] Cd Length: 139 Bit Score: 118.46 E-value: 2.06e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 4 LSVQDIHPGAQAGDKEEAIRQVAAALVQAGNVADGYVNGMLAREQQTSTFLGNGIAIPHGTTDTrdqVLKTGVQVYQFPQ 83
Cdd:pfam00359 2 LDKELIFLNLEAKSKEEAIEFLADKLVEAGYVEPAYLEAILEREKEGSTGIGNGIAIPHARSEA---VKKPGIAVLTLKE 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 84 GVLWG--DGQVAYVAIGIAASSDE--HLGLLRQLTHVLSDDDVAEQLKSATTAEELRALL 139
Cdd:pfam00359 79 PVDFGseDGKPVKLIFLLAAPDNEasHLKILSQLARLLQDEEFVEKLLKAKDPEEILEIL 138
|
|
| PTS_HPr_family |
TIGR01003 |
Phosphotransferase System HPr (HPr) Family; The HPr family are bacterial proteins (or domains ... |
288-369 |
5.88e-17 |
|
Phosphotransferase System HPr (HPr) Family; The HPr family are bacterial proteins (or domains of proteins) which function in phosphoryl transfer system (PTS) systems. They include energy-coupling components which catalyze sugar uptake via a group translocation mechanism. The functions of most of these proteins are not known, but they presumably function in PTS-related regulatory capacities. All seed members are stand-alone HPr proteins, although the model also recognizes HPr domains of PTS fusion proteins. This family includes the related NPr protein. [Signal transduction, PTS]
Pssm-ID: 273389 [Multi-domain] Cd Length: 82 Bit Score: 74.99 E-value: 5.88e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 288 AEFVVRNEHGLHARPGTMLVNTIKQFESEITVANLdgtGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALKAIGDA 367
Cdd:TIGR01003 4 KEVTIINKVGLHARPAAILVKLASGFDSEITLTKN---GKEVNAKSIMGIMMLGAGQGTEVTVSADGEDEAEALEALAKL 80
|
..
gi 1245906141 368 IA 369
Cdd:TIGR01003 81 FE 82
|
|
| PTS-HPr_Halo |
NF041319 |
phosphocarrier protein HPr; |
295-364 |
7.67e-15 |
|
phosphocarrier protein HPr;
Pssm-ID: 469216 [Multi-domain] Cd Length: 87 Bit Score: 69.24 E-value: 7.67e-15
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 295 EHGLHARPGTMLVNTIKQFESEITVANLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALKAI 364
Cdd:NF041319 10 EAGLHARPASKFVETANEFDAEVTVGRADDDGDLVNAASMLAVTGLGVRHGEDVRLVAEGDDAEAALDAL 79
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11109 |
PRK11109 |
fused PTS fructose transporter subunit IIA/HPr protein; |
1-375 |
0e+00 |
|
fused PTS fructose transporter subunit IIA/HPr protein;
Pssm-ID: 236849 [Multi-domain] Cd Length: 375 Bit Score: 689.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 1 MFQLSVQDIHPGAQAGDKEEAIRQVAAALVQAGNVADGYVNGMLAREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVYQ 80
Cdd:PRK11109 1 MFQLSVQDIHLGQQAGNKEEAIRQVAAALTQAGNVAEGYVDGMLAREQQTSTFLGNGIAIPHGTTDTRDLVLKTGVQVFQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 81 FPQGVLWGDGQVAYVAIGIAASSDEHLGLLRQLTHVLSDDDVAEQLKSATTAEELRALLMGEKQSEALKLDNETLTLDVV 160
Cdd:PRK11109 81 FPQGVTWGDGQTAYVAIGIAAKSDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKFDTSLITLDVP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 161 ASDLVTLQALNAGRLKEAGAADATFVTRVINDKPLNLGQGIWLNDSAEGNLRSAIAVSRAANAFDVEGERAAMLVTVAMN 240
Cdd:PRK11109 161 ASDLLTLQALNAGRLKEAGAVDATFVAKVINSKPLNLGQGIWLSDSAEGNLRSAVAVSRAANAFEVDGEPVALLLTVAAA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 241 DEQPVSVLKRLGDLLLNNKAEKLLNADASTVLALLTSDDAPTEDVQTAEFVVRNEHGLHARPGTMLVNTIKQFESEITVA 320
Cdd:PRK11109 241 DDQPLAVLKRLSDLLLAQKADRLLSADAATLLALLTSEDAETDDVLSAEFVIRNEHGLHARPGAMLVNTIKQFNSEITVT 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1245906141 321 NLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEG 375
Cdd:PRK11109 321 NLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGEDAEQALKAIGEAIAAGLGEG 375
|
|
| PRK13779 |
PRK13779 |
bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; Provisional |
1-375 |
3.41e-145 |
|
bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; Provisional
Pssm-ID: 237502 [Multi-domain] Cd Length: 503 Bit Score: 420.82 E-value: 3.41e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 1 MFQLSVQDIHPGAQAGDKEEAIRQVAAALVQAGNVADGYVNGMLAREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVYQ 80
Cdd:PRK13779 1 MLNLSESNIHLNAQAINKQQAIEMAAAALEQAGNVENGYLQGMLARELQTSTFLGNGIAIPHGTLDTRHMVKNTGVQIFQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 81 FPQGVLWGDGQVAYVAIGIAASSDEHLGLLRQLTHVLSDDDVAEQLKSATTAEELRALLMGEKqsEALKLDNETLTLDVV 160
Cdd:PRK13779 81 FPQGIEWGEGNIAYVVIGIAARSDEHLSLLRQLTHVLSDEDTAAKLATLTDVKEFRAILMGET--EPFSVPAANISLDVD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 161 ASDLVTLQALNAGRLKEAGAADATFVTRVINDKPLNLGQGIWLNDSAEGNLRSAIAVSRAANAFDVEGERAAMLVTVAMN 240
Cdd:PRK13779 159 TQSLLTLVAINAGKLQEQSAVENRFISEVISNPALPLGKGLWVTDSAVGNQKNALAFSRAKTIFSHNGKAVQGVITVSAV 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 241 DEQPVSVLKRLGDlllNNKAEKLLNADASTVLALLTSDDAPTEDVQTA----------EFVVRNEHGLHARPGTMLVNTI 310
Cdd:PRK13779 239 DDQINPTLARLLD---DDVQTTLLNGNSEQIIAALNGIVNTASSSTAEtqsaegavigTFTIRNEHGLHARPSANLVNEV 315
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1245906141 311 KQFESEITVANLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEG 375
Cdd:PRK13779 316 KKFTAKITVENLTRGSAPVSAKSLMKIVALGVTQGHRLRFVAEGEDAQQAIEALAKAIAEGLGEN 380
|
|
| MtlA2 |
COG4668 |
Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and ... |
1-142 |
1.52e-75 |
|
Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism];
Pssm-ID: 443705 [Multi-domain] Cd Length: 143 Bit Score: 230.05 E-value: 1.52e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 1 MFQLSVQDIHPGAQAGDKEEAIRQVAAALVQAGNVADGYVNGMLAREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVYQ 80
Cdd:COG4668 1 MLILTKENIRLNASAANKEEAIRLAGQLLVEAGYVEPEYIDAMLEREAQVSTYLGNGIAIPHGTNEAKDLVLKTGISVLQ 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1245906141 81 FPQGVLWGDGQVAYVAIGIAASSDEHLGLLRQLTHVLSDDDVAEQLKSATTAEELRALLMGE 142
Cdd:COG4668 81 FPDGVDWGDGNTVYLVIGIAAKSDEHLEILRQLARVLSDEENVEKLAKATDAEEILALLTGE 142
|
|
| PTS_IIA_fru |
cd00211 |
PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: ... |
4-139 |
6.78e-41 |
|
PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.
Pssm-ID: 238129 [Multi-domain] Cd Length: 136 Bit Score: 140.77 E-value: 6.78e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 4 LSVQDIHPGAQAGDKEEAIRQVAAALVQAGNVADGYVNGMLAREQQTSTFLGNGIAIPHGTTdtrDQVLKTGVQVYQFPQ 83
Cdd:cd00211 1 LTKENIRLNLKAKSKEEAIEELAQLLVAAGYVEEEYIEALLEREKEGSTGIGNGIAIPHAKS---EAVKKPGIAVLRLKE 77
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1245906141 84 GVLWG--DGQVAYVAIGIAA-SSDEHLGLLRQLTHVLSDDDVAEQLKSATTAEELRALL 139
Cdd:cd00211 78 PVDFGslDGQPVHLIFLLAApDSNEHLKALSQLARLLSDEEFVEQLLNAQSKEEILALL 136
|
|
| PRK15083 |
PRK15083 |
PTS system mannitol-specific transporter subunit IICBA; Provisional |
2-143 |
1.02e-40 |
|
PTS system mannitol-specific transporter subunit IICBA; Provisional
Pssm-ID: 237905 [Multi-domain] Cd Length: 639 Bit Score: 151.74 E-value: 1.02e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 2 FQLSVQDIHPGAQAGDKEEAIRQVAAALVQAGNVADGYVNGMLAREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVYQF 81
Cdd:PRK15083 495 FKLGAENIFLGLKAATKEEAIRFAGEQLVKGGYVEPEYVDAMLDREKLTSTYLGESIAVPHGTVEAKDRVLKTGVVFCQY 574
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1245906141 82 PQGVLWGD--GQVAYVAIGIAASSDEHLGLLRQLTHVLSDDDVAEQLKSATTAEELRALLMGEK 143
Cdd:PRK15083 575 PEGVRFGEeeDDIARLVIGIAARNNEHIQVITSLTNALDDESVIERLAHTTSVDEVLELLAGKK 638
|
|
| PTS_EIIA_2 |
pfam00359 |
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; |
4-139 |
2.06e-32 |
|
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2;
Pssm-ID: 459780 [Multi-domain] Cd Length: 139 Bit Score: 118.46 E-value: 2.06e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 4 LSVQDIHPGAQAGDKEEAIRQVAAALVQAGNVADGYVNGMLAREQQTSTFLGNGIAIPHGTTDTrdqVLKTGVQVYQFPQ 83
Cdd:pfam00359 2 LDKELIFLNLEAKSKEEAIEFLADKLVEAGYVEPAYLEAILEREKEGSTGIGNGIAIPHARSEA---VKKPGIAVLTLKE 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 84 GVLWG--DGQVAYVAIGIAASSDE--HLGLLRQLTHVLSDDDVAEQLKSATTAEELRALL 139
Cdd:pfam00359 79 PVDFGseDGKPVKLIFLLAAPDNEasHLKILSQLARLLQDEEFVEKLLKAKDPEEILEIL 138
|
|
| PtsH |
COG1925 |
HPr or related phosphotransfer protein [Signal transduction mechanisms, Carbohydrate transport ... |
287-375 |
5.14e-31 |
|
HPr or related phosphotransfer protein [Signal transduction mechanisms, Carbohydrate transport and metabolism];
Pssm-ID: 441528 [Multi-domain] Cd Length: 88 Bit Score: 113.28 E-value: 5.14e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 287 TAEFVVRNEHGLHARPGTMLVNTIKQFESEITVANldgTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALKAIGD 366
Cdd:COG1925 3 EREVTIVNKLGLHARPAAKLVQLASKFDSEITVEK---GGKEVNAKSIMGLMSLGAKKGDEVTITAEGPDAEEALDALAA 79
|
....*....
gi 1245906141 367 AIAAGLGEG 375
Cdd:COG1925 80 LIESGFGEE 88
|
|
| PtsN |
COG1762 |
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) [Carbohydrate ... |
4-139 |
7.10e-31 |
|
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) [Carbohydrate transport and metabolism, Signal transduction mechanisms];
Pssm-ID: 441368 [Multi-domain] Cd Length: 150 Bit Score: 114.95 E-value: 7.10e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 4 LSVQDIHPGAQAGDKEEAIRQVAAALVQAGNV--ADGYVNGMLAREQQTSTFLGNGIAIPHGTTDTrdqVLKTGVQVYQF 81
Cdd:COG1762 7 LTPELILLDLEASSKEEAIEELAELLAEKGYVldKEEYLEALLEREELGSTGIGPGIAIPHARPEG---VKKPGIAVARL 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1245906141 82 PQGVLWG--DGQVAYVAIGIAA---SSDEHLGLLRQLTHVLSDDDVAEQLKSATTAEELRALL 139
Cdd:COG1762 84 KEPVDFGamDGEPVDLVFLLAApedDSEEHLKLLAELARLLSDEEFREKLLNAKSPEEILELL 146
|
|
| PTS-HPr |
pfam00381 |
PTS HPr component phosphorylation site; |
289-369 |
2.97e-26 |
|
PTS HPr component phosphorylation site;
Pssm-ID: 459792 [Multi-domain] Cd Length: 79 Bit Score: 100.15 E-value: 2.97e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 289 EFVVRNEHGLHARPGTMLVNTIKQFESEITVANLdgtGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALKAIGDAI 368
Cdd:pfam00381 2 TVTITNPLGLHARPAALLVQLASKFDSDITLEKG---GKKVNAKSIMGLMSLGAKQGDEITISAEGEDEEEALEALAALL 78
|
.
gi 1245906141 369 A 369
Cdd:pfam00381 79 E 79
|
|
| PTS-HPr_like |
cd00367 |
Histidine-containing phosphocarrier protein (HPr)-like proteins. HPr is a central component of ... |
289-368 |
1.09e-23 |
|
Histidine-containing phosphocarrier protein (HPr)-like proteins. HPr is a central component of the bacterial phosphoenolpyruvate sugar phosphotransferase system (PTS). The PTS catalyses the phosphorylation of sugar substrates during their translocation across the cell membrane. The phosphoryl group from phosphoenolpyruvate is transferred to HPr by enzyme I (EI). Phospho-HPr then transfers the phosphoryl group to one of several sugar-specific phosphoprotein intermediates. The conserved histidine in the N-terminus of HPr serves as an acceptor for the phosphoryl group of EI. In addition to the phosphotransferase proteins HPr and E1, this family also includes the closely related Carbon Catabolite Repressor (CCR) proteins which use the same phosphorylation mechanism and interact with transcriptional regulators to control expression of genes coding for utilization of less favored carbon sources.
Pssm-ID: 238217 [Multi-domain] Cd Length: 77 Bit Score: 93.34 E-value: 1.09e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 289 EFVVRNEHGLHARPGTMLVNTIKQFESEITVANLdgtGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALKAIGDAI 368
Cdd:cd00367 1 TVTITNPLGLHARPAALLVQLASKFKSDITLRKG---GRKANAKSILGLMSLGAKQGDEITLSAEGEDAEEALEALAELL 77
|
|
| PRK13780 |
PRK13780 |
phosphocarrier protein HPr; Provisional |
289-374 |
4.72e-19 |
|
phosphocarrier protein HPr; Provisional
Pssm-ID: 237503 [Multi-domain] Cd Length: 88 Bit Score: 80.90 E-value: 4.72e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 289 EFVVRNEHGLHARPGTMLVNTIKQFESEITvanLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALKAIGDAI 368
Cdd:PRK13780 5 DFHITAETGIHARPATLLVQTASKFDSDIT---LEYNGKSVNLKSIMGVMSLGVGQGADITISAEGADAADAIAAIEETM 81
|
....*..
gi 1245906141 369 AA-GLGE 374
Cdd:PRK13780 82 KKeGLAE 88
|
|
| PTS_HPr_family |
TIGR01003 |
Phosphotransferase System HPr (HPr) Family; The HPr family are bacterial proteins (or domains ... |
288-369 |
5.88e-17 |
|
Phosphotransferase System HPr (HPr) Family; The HPr family are bacterial proteins (or domains of proteins) which function in phosphoryl transfer system (PTS) systems. They include energy-coupling components which catalyze sugar uptake via a group translocation mechanism. The functions of most of these proteins are not known, but they presumably function in PTS-related regulatory capacities. All seed members are stand-alone HPr proteins, although the model also recognizes HPr domains of PTS fusion proteins. This family includes the related NPr protein. [Signal transduction, PTS]
Pssm-ID: 273389 [Multi-domain] Cd Length: 82 Bit Score: 74.99 E-value: 5.88e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 288 AEFVVRNEHGLHARPGTMLVNTIKQFESEITVANLdgtGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALKAIGDA 367
Cdd:TIGR01003 4 KEVTIINKVGLHARPAAILVKLASGFDSEITLTKN---GKEVNAKSIMGIMMLGAGQGTEVTVSADGEDEAEALEALAKL 80
|
..
gi 1245906141 368 IA 369
Cdd:TIGR01003 81 FE 82
|
|
| PRK09765 |
PRK09765 |
PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional |
12-161 |
1.27e-15 |
|
PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional
Pssm-ID: 182066 [Multi-domain] Cd Length: 631 Bit Score: 78.24 E-value: 1.27e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 12 GAQAGDKEEAIRQVAAALVQAGNV--ADGYVNGMLAREQQTSTFLGNGIAIPHGTTDTrdqVLKTGVQVYQFPQGVLW-- 87
Cdd:PRK09765 15 NARFTSREEAIHALAQRLAALGKIssTEQFLEEVYRRESLGPTALGEGLAVPHGKTAA---VKEAAFAVATLSEPLQWeg 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 88 --GDGQVAYV---AIGIAASSDEHLGLLRQLTHVLSDDDVAEQLKSATTAEELRALLMGEKQSEALK-LDNETLTLDVVA 161
Cdd:PRK09765 92 vdGPEAVDLIfllAIPPNEAGTTHMQLLTALTTRLADDEIRARIQSATTPDELLSALDDKGGTQPSAsFSNAPTIVCVTA 171
|
|
| PTS-HPr_Halo |
NF041319 |
phosphocarrier protein HPr; |
295-364 |
7.67e-15 |
|
phosphocarrier protein HPr;
Pssm-ID: 469216 [Multi-domain] Cd Length: 87 Bit Score: 69.24 E-value: 7.67e-15
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 295 EHGLHARPGTMLVNTIKQFESEITVANLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALKAI 364
Cdd:NF041319 10 EAGLHARPASKFVETANEFDAEVTVGRADDDGDLVNAASMLAVTGLGVRHGEDVRLVAEGDDAEAALDAL 79
|
|
| fruA |
TIGR00848 |
PTS system, fructose subfamily, IIA component; 4.A.2 The PTS Fructose-Mannitol (Fru) Family ... |
14-126 |
5.92e-14 |
|
PTS system, fructose subfamily, IIA component; 4.A.2 The PTS Fructose-Mannitol (Fru) Family Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Fru family is a large and complex family which includes several sequenced fructose and mannitol-specific permeases as well as several putative PTS permeases of unknown specificities. The fructose permeases of this family phosphorylate fructose on the 1-position. Those of family 4.6 phosphorylate fructose on the 6-position. The Fru family PTS systems typically have 3 domains, IIA, IIB and IIC, which may be found as 1 or more proteins. The fructose and mannitol transporters form separate phylogenetic clusters in this family. This model is specific for the IIA domain of the fructose PTS transporters. Also similar to the Enzyme IIA Fru subunits of the PTS, but included in TIGR01419 rather than this model, is enzyme IIA Ntr (nitrogen), also called PtsN, found in E. coli and other organisms, which may play a solely regulatory role. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids, Signal transduction, PTS]
Pssm-ID: 273298 [Multi-domain] Cd Length: 129 Bit Score: 68.07 E-value: 5.92e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 14 QAGDKEEAIRQVAAALVQAGNVADG--YVNGMLAREQQTSTFLGNGIAIPHGTTDTrdqVLKTGVQVYQFPQGVLWG--D 89
Cdd:TIGR00848 12 QFTSKEDVIKFLANKLLENGYISDTeeFLEDLLKREEEGTTGIGDGVAIPHAKSAA---VKQPFVAIARLVKGVDWQslD 88
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1245906141 90 GQ----VAYVAIGIAASSDEHLGLLRQLTHVLSDDDVAEQL 126
Cdd:TIGR00848 89 GKpvklIFLIAVPKDEAGNTHLKALSQLARLLLNDEFRAKL 129
|
|
| PRK11377 |
PRK11377 |
dihydroxyacetone kinase subunit M; Provisional |
283-374 |
1.08e-10 |
|
dihydroxyacetone kinase subunit M; Provisional
Pssm-ID: 183108 [Multi-domain] Cd Length: 473 Bit Score: 62.84 E-value: 1.08e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 283 EDVQTAEFVVRNEHGLHARPGTMLVNTIKQFESEITvanLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALK 362
Cdd:PRK11377 153 EEARSLSVVIKNRNGLHVRPASRLVYTLSTFNADML---LEKNGKCVTPESLNQIALLQVRYNDTLRLIAKGPEAEEALI 229
|
90
....*....|..
gi 1245906141 363 AIGDAIAAGLGE 374
Cdd:PRK11377 230 AFRQLAEDNFGE 241
|
|
| PRK09913 |
PRK09913 |
PTS fructose transporter subunit IIA; |
1-135 |
1.13e-09 |
|
PTS fructose transporter subunit IIA;
Pssm-ID: 182141 [Multi-domain] Cd Length: 148 Bit Score: 56.43 E-value: 1.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 1 MFQLSVQDIHPGAQAGDKEEAIRQVAAALVQAGNVADG--YVNGMLAREQQTSTFLGNGIAIPHGTTDTrdqVLKTGVQV 78
Cdd:PRK09913 1 MAALTASCIDLNIQGNGAYSILKQLATIALQNGFITDShqFLQTLLLREKMHSTGFGSGVAVPHGKSAC---VKQPFVLF 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1245906141 79 YQFPQGVLWG--DGQVA--YVAIGIAAS-SDEHLGLLRQLTHVLSDDDVAEQLKSATTAEEL 135
Cdd:PRK09913 78 ARKAQAIDWQasDGEDVncWICLGVPQSgEEDQVKIIGTLCRKIIHQDFIHQLKQGDTDQVL 139
|
|
| PRK10850 |
PRK10850 |
phosphocarrier protein Hpr; |
289-362 |
2.25e-09 |
|
phosphocarrier protein Hpr;
Pssm-ID: 182777 [Multi-domain] Cd Length: 85 Bit Score: 53.98 E-value: 2.25e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1245906141 289 EFVVRNEHGLHARPGTMLVNTIKQFESEITVANldgTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALK 362
Cdd:PRK10850 5 EVTITAPNGLHTRPAAQFVKEAKGFTSEITVTS---NGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVE 75
|
|
| nitro_reg_IIA |
TIGR01419 |
PTS IIA-like nitrogen-regulatory protein PtsN; This model describes a full-length protein of ... |
5-139 |
4.37e-09 |
|
PTS IIA-like nitrogen-regulatory protein PtsN; This model describes a full-length protein of about 160 residues closely related to the fructose-specific phosphotransferase (PTS) system IIA component. It is a regulatory protein found only in species with a phosphoenolpyruvate-protein phosphotransferase (enzyme I of PTS systems) and an HPr-like phosphocarrier protein, but not all species have a IIC-like permease. Members of this family are found in Proteobacteria, Chlamydia, and the spirochete Treponema pallidum. [Signal transduction, PTS]
Pssm-ID: 162350 [Multi-domain] Cd Length: 145 Bit Score: 54.72 E-value: 4.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 5 SVQDIHPGAQAGDKEEAIRQVAAALVQAGNVAdgyVNGMLAREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVyQFPQG 84
Cdd:TIGR01419 11 IRVAMECGSKKRLLEIISLLAARELSLPEQDV---FECLLAREKLGSTGVGNGIAIPHGRLSGLKQPVGVFIRL-DAPVD 86
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1245906141 85 VLWGDGQ---VAYVAIGIAASSDEHLGLLRQLTHVLSDDDVAEQLKSAtTAEELRALL 139
Cdd:TIGR01419 87 FDALDGKpvdLLFALLVPENATAEHLEALSRIARKLSDKTICRRLRAA-SAEEIYQIL 143
|
|
| PRK10897 |
PRK10897 |
PTS phosphocarrier protein NPr; |
286-374 |
3.72e-08 |
|
PTS phosphocarrier protein NPr;
Pssm-ID: 182819 [Multi-domain] Cd Length: 90 Bit Score: 50.60 E-value: 3.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 286 QTAEfvVRNEHGLHARPGTMLVNTIKQFESEITVANLDGTGKPANgrSLMKVVALGVKKGHRLRFTAQGADAEQALKAIG 365
Cdd:PRK10897 5 QTVE--IKNKLGMHARPAMKLFELVQGFDAEVLLRNDEGTEAEAN--SVIALLMLDSAKGRQIEVEATGPQEEEALAAVI 80
|
....*....
gi 1245906141 366 DAIAAGLGE 374
Cdd:PRK10897 81 ALFNSGFDE 89
|
|
| PRK13782 |
PRK13782 |
HPr family phosphocarrier protein; |
292-364 |
1.10e-07 |
|
HPr family phosphocarrier protein;
Pssm-ID: 172320 [Multi-domain] Cd Length: 82 Bit Score: 49.01 E-value: 1.10e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1245906141 292 VRNEHGLHARPGTMLVNTIKQFESEITvanLDGTGKPANGRSLMKVVALGVKKGHRLRFTAQGADAEQALKAI 364
Cdd:PRK13782 8 VSLKTGLQARPAALFVQEANRFHADIF---IEKDGKKVNAKSIMGLMSLAIGTGSMITIITEGSDEEEALEAL 77
|
|
| cmtB |
PRK09854 |
PTS mannitol transporter subunit IIA; |
15-135 |
1.54e-07 |
|
PTS mannitol transporter subunit IIA;
Pssm-ID: 182114 [Multi-domain] Cd Length: 147 Bit Score: 50.38 E-value: 1.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 15 AGDKEEAIRQVAAALVQAGNVADGYVNGMLAREQQTSTF--LGNGIAIPHGTTDTrdQVLKTGVQVYQFPQGVLW-GDGQ 91
Cdd:PRK09854 18 AKDWQEAIDFSMVSLLDKNYISENYIQAIKDSTINNGPYyiLAPGVAMPHARPEC--GALKTGMSLTLLEQGVYFpGNDE 95
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1245906141 92 VAYVAIGI-AASSDEHLGLLRQLTHVLSDDDVAEQLKSATTAEEL 135
Cdd:PRK09854 96 PIKLLIGLsAADADSHIGAIQALSELLCEEEILEQLLTASSEKQL 140
|
|
| PRK10896 |
PRK10896 |
PTS IIA-like nitrogen regulatory protein PtsN; |
43-135 |
1.57e-03 |
|
PTS IIA-like nitrogen regulatory protein PtsN;
Pssm-ID: 182818 [Multi-domain] Cd Length: 154 Bit Score: 38.58 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1245906141 43 MLAREQQTSTFLGNGIAIPHGTTDtRDQVLKTGVQVyQFPQGVLWG--DGQVAYVAIGIAASSDE---HLGLLRQLTHVL 117
Cdd:PRK10896 53 ILTREKMGSTGIGNGIAIPHGKLE-EDTLRAVGVFV-QLEQPIAFDaiDNQPVDLLFALLVPADQcktHLHTLSLVAKRL 130
|
90
....*....|....*...
gi 1245906141 118 SDDDVAEQLKSATTAEEL 135
Cdd:PRK10896 131 ADKTICRRLRAAQSDEEL 148
|
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