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Conserved domains on  [gi|1237055117|ref|WP_095190962|]
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MULTISPECIES: DUF2798 domain-containing protein [Pseudomonas]

Protein Classification

DUF2798 domain-containing protein( domain architecture ID 10568443)

DUF2798 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2798 pfam11391
Protein of unknown function (DUF2798); This family of proteins has no known function.
 28-86 4.78e-17

Protein of unknown function (DUF2798); This family of proteins has no known function.


:

Pssm-ID: 463268  Cd Length: 59  Bit Score: 67.95  E-value: 4.78e-17
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 1237055117 28 LYMATIMAFLMSLVITAANSGIDNDYLSNALHAYKTAMPVAFLCILVVRPIVIKLVALT 86
Cdd:pfam11391  1 FLMSGLMSFIMSFIITLINLGFSAGFLRRWLKAWLLAWPVAFPIVLLVAPLVRKLVARL 59
 
Name Accession Description Interval E-value
DUF2798 pfam11391
Protein of unknown function (DUF2798); This family of proteins has no known function.
 28-86 4.78e-17

Protein of unknown function (DUF2798); This family of proteins has no known function.


Pssm-ID: 463268  Cd Length: 59  Bit Score: 67.95  E-value: 4.78e-17
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 1237055117 28 LYMATIMAFLMSLVITAANSGIDNDYLSNALHAYKTAMPVAFLCILVVRPIVIKLVALT 86
Cdd:pfam11391  1 FLMSGLMSFIMSFIITLINLGFSAGFLRRWLKAWLLAWPVAFPIVLLVAPLVRKLVARL 59
 
Name Accession Description Interval E-value
DUF2798 pfam11391
Protein of unknown function (DUF2798); This family of proteins has no known function.
 28-86 4.78e-17

Protein of unknown function (DUF2798); This family of proteins has no known function.


Pssm-ID: 463268  Cd Length: 59  Bit Score: 67.95  E-value: 4.78e-17
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 1237055117 28 LYMATIMAFLMSLVITAANSGIDNDYLSNALHAYKTAMPVAFLCILVVRPIVIKLVALT 86
Cdd:pfam11391  1 FLMSGLMSFIMSFIITLINLGFSAGFLRRWLKAWLLAWPVAFPIVLLVAPLVRKLVARL 59
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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