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Conserved domains on  [gi|1222376786|ref|WP_090429062|]
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MULTISPECIES: NADH-quinone oxidoreductase subunit C [unclassified Ensifer]

Protein Classification

NADH-quinone oxidoreductase subunit C( domain architecture ID 10002897)

NADH-quinone oxidoreductase subunit C (NuoC) is part of the connecting domain of complex I of the respiratory chain that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NuoC COG0852
NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) [Energy production and conversion]; ...
 1-153 1.35e-75

NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) [Energy production and conversion]; NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) is part of the Pathway/BioSystem: NADH dehydrogenase


:

Pssm-ID: 440613 [Multi-domain]  Cd Length: 164  Bit Score: 223.55  E-value: 1.35e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786   1 MSVEPSLnRALILERFGEAIEDLGTAHGIDVFVVPPEKIVEFCRFLKDqpEFRFNFLSDICGVDHYPETPRFEAVYHLYS 80
Cdd:COG0852     1 MSELEEL-LEALEEKFGDAVLEVEEARGELTLTVPPEDLVDVARFLRD--DLGFDHLSDLTGVDYPERGDRFEVVYHLLS 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1222376786  81 LPNRWRVRIKCRLGDP-PEVPSVTGVWRTANWHEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDFPLKGY 153
Cdd:COG0852    78 LTHNRRLRLKVFVPRDdPVVPSVTDVWPGANWHEREAYDMFGIVFEGHPDLRRILLPEDWEGHPLRKDFPLEGY 151
 
Name Accession Description Interval E-value
NuoC COG0852
NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) [Energy production and conversion]; ...
 1-153 1.35e-75

NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) [Energy production and conversion]; NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440613 [Multi-domain]  Cd Length: 164  Bit Score: 223.55  E-value: 1.35e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786   1 MSVEPSLnRALILERFGEAIEDLGTAHGIDVFVVPPEKIVEFCRFLKDqpEFRFNFLSDICGVDHYPETPRFEAVYHLYS 80
Cdd:COG0852     1 MSELEEL-LEALEEKFGDAVLEVEEARGELTLTVPPEDLVDVARFLRD--DLGFDHLSDLTGVDYPERGDRFEVVYHLLS 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1222376786  81 LPNRWRVRIKCRLGDP-PEVPSVTGVWRTANWHEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDFPLKGY 153
Cdd:COG0852    78 LTHNRRLRLKVFVPRDdPVVPSVTDVWPGANWHEREAYDMFGIVFEGHPDLRRILLPEDWEGHPLRKDFPLEGY 151
Complex1_30kDa pfam00329
Respiratory-chain NADH dehydrogenase, 30 Kd subunit;
32-154 4.77e-66

Respiratory-chain NADH dehydrogenase, 30 Kd subunit;


Pssm-ID: 459763 [Multi-domain]  Cd Length: 121  Bit Score: 197.70  E-value: 4.77e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  32 FVVPPEKIVEFCRFLKDQpEFRFNFLSDICGVDhYPETPRFEAVYHLYSLPNRWRVRIKCRLGDPPEVPSVTGVWRTANW 111
Cdd:pfam00329   1 VTVDPEDLLEVARFLRDD-ELGFDHLSDLTGVD-YPEEGRFEVVYHLLSITHNVRVRVKVPLEDDPVVPSVTDIWPGANW 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1222376786 112 HEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDFPLKGYK 154
Cdd:pfam00329  79 YEREVYDMFGIVFEGHPDLRRILLPEDWEGHPLRKDFPLTGYV 121
PRK06074 PRK06074
NADH dehydrogenase subunit C; Provisional
 12-153 1.25e-65

NADH dehydrogenase subunit C; Provisional


Pssm-ID: 235691 [Multi-domain]  Cd Length: 189  Bit Score: 198.98  E-value: 1.25e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  12 ILERFGEAIEDLGTAHGIDVFVVPPEKIVEFCRFLKDQPEFRFNFLSDICGVDHYPETPRFEAVYHLYSLPNRWRVRIKC 91
Cdd:PRK06074   11 LLEKLPDAIGKVTVAFGELTLKVPAEKILEVLTFLRDDPELRFEQLIDLTGVDYPERGKRFEVVYHLLSYKHNVRLRVKV 90

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1222376786  92 RLGDPPEVPSVTGVWRTANWHEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDFPLKGY 153
Cdd:PRK06074   91 RAPEDPVVPSVVDIWPSANWYEREAYDLYGIVFEGHPDLRRILTDYGFEGHPLRKDFPLTGY 152
NuoC_fam TIGR01961
NADH (or F420H2) dehydrogenase, subunit C; This model describes the C subunit of the NADH ...
 31-152 7.15e-65

NADH (or F420H2) dehydrogenase, subunit C; This model describes the C subunit of the NADH dehydrogenase complex I in bacteria, as well as many instances of the corresponding mitochondrial subunit (NADH dehydrogenase subunit 9) and of the F420H2 dehydrogenase in Methanosarcina. Complex I contains subunits designated A-N. This C subunit often occurs as a fusion protein with the D subunit. This model excludes the NAD(P)H and plastoquinone-dependent form of chloroplasts and [Energy metabolism, Electron transport]


Pssm-ID: 273897 [Multi-domain]  Cd Length: 121  Bit Score: 194.76  E-value: 7.15e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  31 VFVVPPEKIVEFCRFLKDqPEFRFNFLSDICGVDhYPETPRFEAVYHLYSLPNRWRVRIKCRLGDPPEVPSVTGVWRTAN 110
Cdd:TIGR01961   2 VVWIKKEQLLEVLTFLKD-PALGFELLTDVSGVD-YPKEKRFEVVYHLLSIKKNRRIRLKVRLSEDDPVPSLTSVFPTAN 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1222376786 111 WHEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDFPLKG 152
Cdd:TIGR01961  80 WYERETYDMYGIVFDGHPDLRRILMPDDFEGHPLRKDYPLTG 121
 
Name Accession Description Interval E-value
NuoC COG0852
NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) [Energy production and conversion]; ...
 1-153 1.35e-75

NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) [Energy production and conversion]; NADH:ubiquinone oxidoreductase 27 kD subunit (chain C) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440613 [Multi-domain]  Cd Length: 164  Bit Score: 223.55  E-value: 1.35e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786   1 MSVEPSLnRALILERFGEAIEDLGTAHGIDVFVVPPEKIVEFCRFLKDqpEFRFNFLSDICGVDHYPETPRFEAVYHLYS 80
Cdd:COG0852     1 MSELEEL-LEALEEKFGDAVLEVEEARGELTLTVPPEDLVDVARFLRD--DLGFDHLSDLTGVDYPERGDRFEVVYHLLS 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1222376786  81 LPNRWRVRIKCRLGDP-PEVPSVTGVWRTANWHEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDFPLKGY 153
Cdd:COG0852    78 LTHNRRLRLKVFVPRDdPVVPSVTDVWPGANWHEREAYDMFGIVFEGHPDLRRILLPEDWEGHPLRKDFPLEGY 151
Complex1_30kDa pfam00329
Respiratory-chain NADH dehydrogenase, 30 Kd subunit;
32-154 4.77e-66

Respiratory-chain NADH dehydrogenase, 30 Kd subunit;


Pssm-ID: 459763 [Multi-domain]  Cd Length: 121  Bit Score: 197.70  E-value: 4.77e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  32 FVVPPEKIVEFCRFLKDQpEFRFNFLSDICGVDhYPETPRFEAVYHLYSLPNRWRVRIKCRLGDPPEVPSVTGVWRTANW 111
Cdd:pfam00329   1 VTVDPEDLLEVARFLRDD-ELGFDHLSDLTGVD-YPEEGRFEVVYHLLSITHNVRVRVKVPLEDDPVVPSVTDIWPGANW 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1222376786 112 HEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDFPLKGYK 154
Cdd:pfam00329  79 YEREVYDMFGIVFEGHPDLRRILLPEDWEGHPLRKDFPLTGYV 121
PRK06074 PRK06074
NADH dehydrogenase subunit C; Provisional
 12-153 1.25e-65

NADH dehydrogenase subunit C; Provisional


Pssm-ID: 235691 [Multi-domain]  Cd Length: 189  Bit Score: 198.98  E-value: 1.25e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  12 ILERFGEAIEDLGTAHGIDVFVVPPEKIVEFCRFLKDQPEFRFNFLSDICGVDHYPETPRFEAVYHLYSLPNRWRVRIKC 91
Cdd:PRK06074   11 LLEKLPDAIGKVTVAFGELTLKVPAEKILEVLTFLRDDPELRFEQLIDLTGVDYPERGKRFEVVYHLLSYKHNVRLRVKV 90

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1222376786  92 RLGDPPEVPSVTGVWRTANWHEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDFPLKGY 153
Cdd:PRK06074   91 RAPEDPVVPSVVDIWPSANWYEREAYDLYGIVFEGHPDLRRILTDYGFEGHPLRKDFPLTGY 152
NuoC_fam TIGR01961
NADH (or F420H2) dehydrogenase, subunit C; This model describes the C subunit of the NADH ...
 31-152 7.15e-65

NADH (or F420H2) dehydrogenase, subunit C; This model describes the C subunit of the NADH dehydrogenase complex I in bacteria, as well as many instances of the corresponding mitochondrial subunit (NADH dehydrogenase subunit 9) and of the F420H2 dehydrogenase in Methanosarcina. Complex I contains subunits designated A-N. This C subunit often occurs as a fusion protein with the D subunit. This model excludes the NAD(P)H and plastoquinone-dependent form of chloroplasts and [Energy metabolism, Electron transport]


Pssm-ID: 273897 [Multi-domain]  Cd Length: 121  Bit Score: 194.76  E-value: 7.15e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  31 VFVVPPEKIVEFCRFLKDqPEFRFNFLSDICGVDhYPETPRFEAVYHLYSLPNRWRVRIKCRLGDPPEVPSVTGVWRTAN 110
Cdd:TIGR01961   2 VVWIKKEQLLEVLTFLKD-PALGFELLTDVSGVD-YPKEKRFEVVYHLLSIKKNRRIRLKVRLSEDDPVPSLTSVFPTAN 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1222376786 111 WHEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDFPLKG 152
Cdd:TIGR01961  80 WYERETYDMYGIVFDGHPDLRRILMPDDFEGHPLRKDYPLTG 121
PRK07785 PRK07785
NADH dehydrogenase subunit C; Provisional
 13-169 1.21e-44

NADH dehydrogenase subunit C; Provisional


Pssm-ID: 181115 [Multi-domain]  Cd Length: 235  Bit Score: 147.06  E-value: 1.21e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  13 LERFGEAIEDLGTAHGIDVFVVPPEKIVEFCRFLKDQPEFRFNFLSDICGVdHYPE-TPR-FEAVYHLYSLPNRWRVRIK 90
Cdd:PRK07785   74 LPEFADAIERVVVDRGELTLHVRREHLVEVAQTLRDDPALRFELCLGVSGV-HYPHdTGReLHAVYHLTSITHNRRIRLE 152

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  91 CRLGDP-PEVPSVTGVWRTANWHEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDFPLKG----YKdklnpfGAEGP 165
Cdd:PRK07785  153 VAVPDAdPHIPSLVSVYPTNDWHERETYDFFGIVFDGHPALTRIEMPDDWVGHPQRKDYPLGGipveYK------GATIP 226


                  ....
gi 1222376786 166 PPTQ 169
Cdd:PRK07785  227 PPDQ 230
PRK13292 PRK13292
NADH-quinone oxidoreductase subunit B/C/D;
14-178 2.01e-38

NADH-quinone oxidoreductase subunit B/C/D;


Pssm-ID: 183955 [Multi-domain]  Cd Length: 788  Bit Score: 139.14  E-value: 2.01e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  14 ERFGEAIEDLGTAHGIDVFVVPPEKIVEFCRFLKDQPEFRFNFLSDICGVDHY-----PETPRFEAVYHLYSLPNRWRVR 88
Cdd:PRK13292  230 GAFGDDVRLDEGATDMLTYRCPPELVPEVLRHLKKRASSPFRRLEDLAAVDEScrrdrEKFPDFTVNYHLLSFDTPGHVR 309

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  89 IKCRL-GDPPEVPSVTGVWRTANWHEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDFplkgykdklnPFGAEGPPP 167
Cdd:PRK13292  310 IKTELrGRTPELPSATGVFPAANWYEREAFDMFGIRFAGHPNLRRILMPPDWEGHPLRKEH----------PFRATEMPP 379

                         170
                  ....*....|.
gi 1222376786 168 TQPDLATRNIP 178
Cdd:PRK13292  380 YTRDDARRLQP 390
PRK11742 PRK11742
bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional
 15-149 1.34e-35

bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional


Pssm-ID: 236965 [Multi-domain]  Cd Length: 575  Bit Score: 130.04  E-value: 1.34e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  15 RFG-EAIEDLGTAHGIDVFVVPPEKIVEFCRFLKDQPEfRFNFLSDICGVD-----HYPETP--RFEAVYHLYSLPNRWR 86
Cdd:PRK11742    8 RFGpDAFTVQATRTGIPVVWVKREQLLEVLRFLRKLPK-PYVMLFDLHGIDerlrtHREGLPaaDFTVFYHLISIERNRD 86

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1222376786  87 VRIKCRL-GDPPEVPSVTGVWRTANWHEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDFP 149
Cdd:PRK11742   87 IMLKVALsENDLHVPTITKIFPNANWYERETWDMFGITFDGHPHLRRILMPPTWEGHPLRKDYP 150
PRK07735 PRK07735
NADH-quinone oxidoreductase subunit C;
4-148 4.17e-35

NADH-quinone oxidoreductase subunit C;


Pssm-ID: 236081 [Multi-domain]  Cd Length: 430  Bit Score: 127.02  E-value: 4.17e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786   4 EPSLNR--ALILERFGE-AIEDL---GTAHGIDVFVVPPEKIVEFCRFLKDQPEFRFNFLSDICGVDHypETpRFEAVYH 77
Cdd:PRK07735  275 QPYLNKyvEVIKEKLGEdVLEDSyinKLSKDVPTLVVEPEKYYEVAELLRFHEQLAFDYLSELHGTDF--VT-HMEVYVH 351

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1222376786  78 LYSLPNRWRVRIKCRLG-DPPEVPSVTGVWRTANWHEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDF 148
Cdd:PRK07735  352 LYSYGKRQSVAVKVKLDrEAPQVESVTPLWKGANWPEREAYDLLGIVFKGHPNLSRILLPDDWVGHPLRKDY 423
PRK08491 PRK08491
NADH-quinone oxidoreductase subunit C;
31-163 1.77e-28

NADH-quinone oxidoreductase subunit C;


Pssm-ID: 181449  Cd Length: 263  Bit Score: 106.30  E-value: 1.77e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  31 VFVVPPEKIVEFCRFLKdqpEFRFNFLSDICGVDHYPETPRFEAVYHLYSLPNRWRVRIKCRLGDPPEVPSVTGVWRTAN 110
Cdd:PRK08491   60 VIWIKKDDNFKVLKILK---HLGYECLSEMSAIDFLAKKGGFEVFYQLLSMSKRKRVRVKCFLKEKEALQSVSFLFKSAN 136

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786 111 WHEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDFPLKG------YK-DKLnpFGAE 163
Cdd:PRK08491  137 WSEREMYDMFGIVINNHPYLKRILMPDDWVGHPLLKSYPLKGdefaqwYEvDKI--FGKE 194
PRK12494 PRK12494
NAD(P)H-quinone oxidoreductase subunit J;
21-148 3.72e-26

NAD(P)H-quinone oxidoreductase subunit J;


Pssm-ID: 183557 [Multi-domain]  Cd Length: 172  Bit Score: 97.72  E-value: 3.72e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  21 EDLGTAH-GIDVFVVPPEKIVEFCRFLKDQPefrFNFLSDICGVDhypETP--RFEAVYHLYSLPNRWR----VRIKCRL 93
Cdd:PRK12494   31 ESLGPDHlGVEIIKVEPDFLLPIATALYAYG---FNYLQCQGGYD---EGPgkELVSFYHLIKVSDNADkpreVRLKVFL 104

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1222376786  94 G-DPPEVPSVTGVWRTANWHEREAWDMYGIRFQGHPDLRRIYMWEGFEGFPQRKDF 148
Cdd:PRK12494  105 PrDDPRVPSVYWIWKGADWQERETYDMYGINFEGHPNLKRILMPEDWVGWPLRKDY 160
HycE1 COG3262
Ni,Fe-hydrogenase III component G [Energy production and conversion];
12-149 7.81e-21

Ni,Fe-hydrogenase III component G [Energy production and conversion];


Pssm-ID: 442493 [Multi-domain]  Cd Length: 523  Bit Score: 88.47  E-value: 7.81e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  12 ILERFGEAIEDLGTAHGIDVFV-VPPEKIVEFCRFLKDQPEFRfnfLSDICGVDHYPETPRFEAVYHLYSLPNRWRVRIK 90
Cdd:COG3262     7 LRARFGGSILERRWVRPNEVWVeVDREDLPELAEFLAEGGGGR---LAALWGNDERELGGGFAVYYVFALEGEGALVTLK 83

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1222376786  91 CRL-GDPPEVPSVTGVWRTANWHEREAWDMYGIRFQGHPDLRRIYMWEGF-EG-FPQRKDFP 149
Cdd:COG3262    84 VSVpKDDPVFPSITDLFPAASWYEREIRDLFGIVPEGHPDPRRLVLHDDWpEGiYPLRKDFK 145
ndhJ CHL00012
NADH dehydrogenase subunit J
 54-148 1.55e-17

NADH dehydrogenase subunit J


Pssm-ID: 176955 [Multi-domain]  Cd Length: 158  Bit Score: 75.12  E-value: 1.55e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1222376786  54 FNFLSDICGVDHYPETPrFEAVYHL----YSLPNRWRVRIKCRLG-DPPEVPSVTGVWRTANWHEREAWDMYGIRFQGHP 128
Cdd:CHL00012   48 YNYLRSQCAYDVAPGGL-LASVYHLtriqYGVDQPEEVCIKVFVPrKNPRIPSVFWVWKSADFQERESYDMLGISYDNHP 126

                          90       100
                  ....*....|....*....|
gi 1222376786 129 DLRRIYMWEGFEGFPQRKDF 148
Cdd:CHL00012  127 RLKRILMPESWIGWPLRKDY 146
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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