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Conserved domains on  [gi|1198982792|ref|WP_087092638|]
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MULTISPECIES: molecular chaperone [Pseudomonas]

Protein Classification

molecular chaperone( domain architecture ID 11459711)

molecular chaperone belonging to the periplasmic pilus chaperone family may be involved in fimbrial biogenesis; similar to Escherichia coli fimbrial chaperones, YraI, YqiH, YbgP and ElfD

CATH:  2.60.40.10
Gene Ontology:  GO:0061077|GO:0030288|GO:0043711
PubMed:  1683764|8670884
SCOP:  4002248|4007561

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
28-236 4.77e-77

P pilus assembly protein, chaperone PapD [Extracellular structures];


:

Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 232.57  E-value: 4.77e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  28 QAGVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWV---NTETDDNSTPTPFMATPPLFRLDPRKEQIVRIRKVPGAL 104
Cdd:COG3121    22 AAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVddwDQDAGPDKATAPFVVTPPLFRLEPGKSQTVRIIRTGPPL 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 105 PEDRESVFYFNAQEIP--VAGTEHGNTLKVALRTRIKLFYRPPKLQGSSMDALPELRWSLVykqgKTFLQVNNPSPFHVS 182
Cdd:COG3121   102 PQDRESLFRLNVDEIPpkDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLV----GNGLTVTNPGPYYVT 177

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1198982792 183 FIGVQVVAGQQKIEVlEPKMVAPMKSQSYPLPGFKNNK--GEVIFSAINDYGGYSK 236
Cdd:COG3121   178 LSDLSLGAGGKKLKK-GLGMVLPGSTRRWPLPAGASLAagGKVTWATINDYGGAVP 232
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
28-236 4.77e-77

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 232.57  E-value: 4.77e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  28 QAGVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWV---NTETDDNSTPTPFMATPPLFRLDPRKEQIVRIRKVPGAL 104
Cdd:COG3121    22 AAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVddwDQDAGPDKATAPFVVTPPLFRLEPGKSQTVRIIRTGPPL 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 105 PEDRESVFYFNAQEIP--VAGTEHGNTLKVALRTRIKLFYRPPKLQGSSMDALPELRWSLVykqgKTFLQVNNPSPFHVS 182
Cdd:COG3121   102 PQDRESLFRLNVDEIPpkDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLV----GNGLTVTNPGPYYVT 177

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1198982792 183 FIGVQVVAGQQKIEVlEPKMVAPMKSQSYPLPGFKNNK--GEVIFSAINDYGGYSK 236
Cdd:COG3121   178 LSDLSLGAGGKKLKK-GLGMVLPGSTRRWPLPAGASLAagGKVTWATINDYGGAVP 232
PRK09926 PRK09926
fimbrial chaperone;
28-233 1.00e-64

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 201.49  E-value: 1.00e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  28 QAGVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWVNTeTDDNSTP----TPFMATPPLFRLDPRKEQIVRIRKV-PG 102
Cdd:PRK09926   24 IADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDT-GDDNAEPgsikVPFTATPPVSRIDPKRGQTIKLMYTaST 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 103 ALPEDRESVFYFNAQEIP----VAGTEHGNTLKVALRTRIKLFYRPPKLQGSSMDALPELRWSLVYKQGKTFLQVNNPSP 178
Cdd:PRK09926  103 ALPKDRESVFWFNVLEVPpkpdAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWSWAGSEGKASLRVTNPTP 182

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1198982792 179 FHVSFIGVQVVAGQQKIEVlEPKMVAPMKSQSYPLPGFKNNK--GEVIFSAINDYGG 233
Cdd:PRK09926  183 YYVSFSSGDLEAGGKRYPV-DSKMIAPFSDESMKVKGLSGKAssGKVHFYAINDFGG 238
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 31-147 3.58e-49

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 157.75  E-value: 3.58e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  31 VMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWV---NTETDDNSTPTPFMATPPLFRLDPRKEQIVRIRKVPGALPED 107
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVddgNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1198982792 108 RESVFYFNAQEIP--VAGTEHGNTLKVALRTRIKLFYRPPKL 147
Cdd:pfam00345  81 RESLFWLNVLEIPpkDKPKGGQNGLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
28-236 4.77e-77

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 232.57  E-value: 4.77e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  28 QAGVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWV---NTETDDNSTPTPFMATPPLFRLDPRKEQIVRIRKVPGAL 104
Cdd:COG3121    22 AAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVddwDQDAGPDKATAPFVVTPPLFRLEPGKSQTVRIIRTGPPL 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 105 PEDRESVFYFNAQEIP--VAGTEHGNTLKVALRTRIKLFYRPPKLQGSSMDALPELRWSLVykqgKTFLQVNNPSPFHVS 182
Cdd:COG3121   102 PQDRESLFRLNVDEIPpkDASEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAAEKLTWSLV----GNGLTVTNPGPYYVT 177

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1198982792 183 FIGVQVVAGQQKIEVlEPKMVAPMKSQSYPLPGFKNNK--GEVIFSAINDYGGYSK 236
Cdd:COG3121   178 LSDLSLGAGGKKLKK-GLGMVLPGSTRRWPLPAGASLAagGKVTWATINDYGGAVP 232
PRK09926 PRK09926
fimbrial chaperone;
28-233 1.00e-64

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 201.49  E-value: 1.00e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  28 QAGVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWVNTeTDDNSTP----TPFMATPPLFRLDPRKEQIVRIRKV-PG 102
Cdd:PRK09926   24 IADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDT-GDDNAEPgsikVPFTATPPVSRIDPKRGQTIKLMYTaST 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 103 ALPEDRESVFYFNAQEIP----VAGTEHGNTLKVALRTRIKLFYRPPKLQGSSMDALPELRWSLVYKQGKTFLQVNNPSP 178
Cdd:PRK09926  103 ALPKDRESVFWFNVLEVPpkpdAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWSWAGSEGKASLRVTNPTP 182

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1198982792 179 FHVSFIGVQVVAGQQKIEVlEPKMVAPMKSQSYPLPGFKNNK--GEVIFSAINDYGG 233
Cdd:PRK09926  183 YYVSFSSGDLEAGGKRYPV-DSKMIAPFSDESMKVKGLSGKAssGKVHFYAINDFGG 238
PRK15208 PRK15208
molecular chaperone LpfB;
29-232 2.03e-50

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 164.31  E-value: 2.03e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  29 AGVMLGGTRIVYDGSKRDASITVSN-TTGQPYAVQAWVNTETddNSTPTPFMATPPLFRLDPRKEQIVRIRKVPGALPED 107
Cdd:PRK15208   21 GGVALSSTRVIYDGSKKEASLTVNNkSKTEEFLIQSWIDDAN--GNKKTPFIITPPLFKLDPTKNNVLRIVNITNTLPQD 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 108 RESVFYFNAQEIPV--AGTEHGNTLKVALRTRIKLFYRPPKLQGSSMDALPELRWSLVYKQgktfLQVNNPSPFHVSFig 185
Cdd:PRK15208   99 RESVYWINVKAIPAksEDAENKNVLQIAVRTRLKLFYRPAGLKGNSMDAWNKLRFTRAGNQ----IKVENPSAFNLTF-- 172

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1198982792 186 VQVVAGQQKIEvlEPKMVAPMKSQSYPLPGFKNNKGEVIFSAINDYG 232
Cdd:PRK15208  173 NQFYANGRDIE--KAGMVPAKGSLNIELPAGTGKVSEVKYNIINDFG 217
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 31-147 3.58e-49

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 157.75  E-value: 3.58e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  31 VMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWV---NTETDDNSTPTPFMATPPLFRLDPRKEQIVRIRKVPGALPED 107
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVddgNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1198982792 108 RESVFYFNAQEIP--VAGTEHGNTLKVALRTRIKLFYRPPKL 147
Cdd:pfam00345  81 RESLFWLNVLEIPpkDKPKGGQNGLQLALRSRIKLFYRPAGL 122
lfpB PRK15290
fimbrial chaperone;
29-242 3.70e-48

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 159.00  E-value: 3.70e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  29 AGVMLGGTRIVYDGSKRDASITVSNTTGQ-PYAVQAWVNTETDDNSTPTPFMATPPLFRLDPRKEQIVRIRKVPG-ALPE 106
Cdd:PRK15290   37 AGVVIGGTRVVYLSNNPDKSISVFSKEEKiPYLIQAWVDPFNKEDKSKAPFTVIPPVSRLEPSQEKVLRIIHTKGvSLPD 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 107 DRESVFYFNAQEI-PVAGTEHGNTLKVALRTRIKLFYRPPKLQGSSMDALPELRWslvYKQGKTfLQVNNPSPFHVSFIG 185
Cdd:PRK15290  117 DRESVFWLNIKNIpPSASNKATNSLEIAVKTRIKLFWRPASIRLIPEDAAPKVKW---RREGRN-LIAENPNPIHISVMD 192

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1198982792 186 VqVVAGQQkievLEPKMVAPMKSQSYPLPGfKNNKGEVIFSAINDYGGYSKPLHVPL 242
Cdd:PRK15290  193 V-IVDGHD----VPLNMIRPFETLTLPLPA-NSAGGQMTWRFINDYGAVSDPIKMTL 243
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 29-239 2.89e-43

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 146.08  E-value: 2.89e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  29 AGVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWVNTETDDNST-PTPFMATPPLFRLDPRKEQIVRIRKVPGALPED 107
Cdd:PRK15299   22 AGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETGASgDAPFMVTPPLFRLNGGQKNVLRIIRTGGNLPED 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 108 RESVFYFNAQEIPVAGTEHG-NTLKVALRTRIKLFYRPPKLQGSSMDALPELRWSlvyKQGKTfLQVNNPSPFHVSFIGV 186
Cdd:PRK15299  102 RESLYWLDIKSIPSSNPDNKhNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWS---RQGRT-LTVKNPTPYYMNFATL 177

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1198982792 187 QVvaGQQKIEVlePKMVAPMKSQSYPLPGFKNnkGEVIFSAINDYGGySKPLH 239
Cdd:PRK15299  178 SV--GSQKVKA--PRYVAPFGNAQYTLPAAAS--GPIAWSIINDFGG-TGPEH 223
PRK15249 PRK15249
fimbrial chaperone;
29-241 8.07e-43

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 145.71  E-value: 8.07e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  29 AGVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWVN----TETDDNSTPTPFMATPPLFRLDPRKEQIVRI----RKv 100
Cdd:PRK15249   28 ASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDdgdmNTSPENSSAMPFIATPPVFRIQPKAGQVVRViynnTK- 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 101 pgALPEDRESVFYFNAQEIP---VAGTEHGNTLKVALRTRIKLFYRPPKLqGSSMDALPELRWSLVYK-QGKTFLQVNNP 176
Cdd:PRK15249  107 --KLPQDRESVFWFNVLQVPptnIGSDSGQNKMLVMLRSRIKLFYRPDGL-GKPDNLAKKLQIKTVNKgSGKSGIVIVNP 183

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1198982792 177 SPFHVSFIGVQVVAGQQKIEvLEPKMVAPMKSQSYPLPGFKNNK---GEVIFSAINDYGG-YSKPLHVP 241
Cdd:PRK15249  184 QPWFASLSNLNVKVNGASYN-LDADMIAPFSSQTWWLPGKRSLKsfsGTVTVTLVNDQGArISESYDVP 251
PRK15295 PRK15295
fimbrial assembly chaperone;
28-237 1.01e-42

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 144.70  E-value: 1.01e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  28 QAGVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWVNTETDDNSTPTPFMATPPLFRLDPRKEQIVRIRKVPGALPED 107
Cdd:PRK15295   18 HASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDPQVTNKQAFIITPPLFRLDAGQKNSIRVIRSGAPLPAD 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 108 RESVFYFNAQEIP-VAGTEHGNTLKVALRTRIKLFYRPPKLQGSSMDALPE-LRWSlvyKQGkTFLQVNNPSPFHVSFIG 185
Cdd:PRK15295   98 RESMYWLNIKGIPsIDDNASANRVEISINTQIKLIYRPPALTKSTPDSQSQqLKWQ---TAG-DVITVNNPTPYYMNFAS 173

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1198982792 186 VQVvagqQKIEVLEPKMVAPMKSQSYPLPGFKNNKGEVIFSAINDYGGYSKP 237
Cdd:PRK15295  174 VTL----NSHEVKSATFVPPKSSASFKLGSTAAPHGTVTWRLISDYGMSLEP 221
PRK15211 PRK15211
fimbrial chaperone;
29-233 2.23e-38

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 133.41  E-value: 2.23e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  29 AGVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWVNTeTDDNSTPTPFMATPPLFRLDPRKEQIVRIRKVPGALPEDR 108
Cdd:PRK15211   22 AAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWIDN-TTQGSSTVYMVPAPPFFKVRPKEKQIIRIMKTDSALPKDR 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 109 ESVFYFNAQEIPVAGTE-HGNTLKVALRTRIKLFYRPPKLQGSSMDAlpELRWSLVYKQGKTFLQvnNPSPFHVSFIGVQ 187
Cdd:PRK15211  101 ESLFWLNVQEIPPKPKAsEGNVLAVALNTQVKLIYRPKALKEGRENA--EKNLQIIHRGGETYLK--NPTPYYFAVTGVK 176

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1198982792 188 V----VAGQQKIEVlEPKMVAPMKSQSYplpGFKNNKGEVIFSAINDYGG 233
Cdd:PRK15211  177 LngqpVKLSDRVMN-EIAQLAPFSEVSL---GKLSLNGTVTVQAVNDWGG 222
PRK15195 PRK15195
molecular chaperone FimC;
30-232 5.69e-38

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 132.29  E-value: 5.69e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  30 GVMLGGTRIVYDGSKRDASITVSNT-TGQPYAVQAWVntETDDNSTPTPFMATPPLFRLDPRKEQIVRIRKVPGALPEDR 108
Cdd:PRK15195   26 GIALGATRVIYPADAKQTSLAIRNShTNERYLVNSWI--ENSSGVKEKSFIVTPPLFVSEPKSENTLRIIYAGPPLAADR 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 109 ESVFYFNAQEIPV---AGTEHGNTLKVALRTRIKLFYRPPKLQGSSMDALPELRWSLVykqgKTFLQVNNPSPFHVSFIG 185
Cdd:PRK15195  104 ESLFWMNVKAIPSvdkNALEGRNVLQLAILSRIKLFVRPINLQELPEEAPDTLKFSRS----GNHLKVHNPSPYYVTLVN 179

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1198982792 186 VQVvaGQQKIEVLepkMVAPMKSQSYPLPGfkNNKGEVIFSAINDYG 232
Cdd:PRK15195  180 LQV--GSQKLGNA---MIAPKVNSQIPLPS--GVQGKLKFQTVNDYG 219
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 28-234 1.33e-29

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 110.91  E-value: 1.33e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  28 QAGVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWV---NTETDDNSTPTPFMATPPLFRLDPRKEQIVRIRKVPGAL 104
Cdd:PRK15253   32 HAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIddgNTSLPPEKIQVPFMLTPPVARVAAESGQQIKIKKMPNSL 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 105 PEDRESVFYFNAQEIPVAGTEHG--NTLKVALRTRIKLFYRPPKLQGSSMDALPELRwslVYKQGKTFLQVNNPSpfhvS 182
Cdd:PRK15253  112 PDNKESLFYLNVLDIPPNSQENAgkNVLKFAMQNRIKLIWRPSRIAAVTKDSFQRIG---LFRSNKTVIMKNDTA----N 184

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1198982792 183 FIGV-QVVAGQQKIEVlEPKMVAPMKSQSYPLPGFKNNKGEVifSAINDYGGY 234
Cdd:PRK15253  185 WITVtDVKAGNTKIND-QTIMLPPLSTQNINMKYASTSQYEV--TIIDDNGNY 234
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 29-233 1.58e-29

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 110.62  E-value: 1.58e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  29 AGVMLGGTRIVY-DGSKRDASITVSNTTGQPYAVQAWVNTEtdDNSTPTPFMATPPLFRLDPRKEQIVRIRKVPGALPED 107
Cdd:PRK15188   27 GGIALGATRVIYpQGSKQTSLPIINSSASNVFLIQSWVANA--DGSRSTDFIITPPLFVIQPKKENILRIMYVGPSLPTD 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 108 RESVFYFNAQEIPVAGTEH--GNTLKVALRTRIKLFYRPPKLQGSSMDALPELRWSLVYKQgktfLQVNNPSPFHVSFIG 185
Cdd:PRK15188  105 RESVFYLNSKAIPSVDKNKltGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCRNERGQ----LTITNPSPYYVSMVE 180

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1198982792 186 VQvVAGQQkievLEPKMVAPMKSQSYPLpgfknNKGEVIFSAINDYGG 233
Cdd:PRK15188  181 LY-SAGKK----LPNTMVPPKGAITLPA-----TPGQVSLRTVNDFGA 218
PRK15224 PRK15224
pili assembly chaperone PapD;
31-239 6.62e-29

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 109.06  E-value: 6.62e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  31 VMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWVNTEtdDNSTPTPFMATPPLFRLDPRKEQIVRIRKVPGALPEDRES 110
Cdd:PRK15224   30 VKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAA--DKSSPAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRET 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 111 VFYFNAQEIPVAGTE-----HGNTLKVALRTRI--KLFYRPPKLQGSSMDALPELRWSlvykQGKTFLQVNNPSPFHVSF 183
Cdd:PRK15224  108 LQWVCIKAVPPENEPsdtqaKGATLDLNLSINVcdKLIFRPDAVKGTPEDVAGNLRWV----ETGNKLKVENPTPFYMNL 183

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1198982792 184 IGVQVvaGQQKIEVLEpkMVAPMKSQSYPLPGfkNNKGEVIFSAINDYGGYSKPLH 239
Cdd:PRK15224  184 ASVTV--GGKPITGLE--YIPPFADKTLNMPG--SAHGDIEWRVITDFGGESHPFH 233
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 36-234 7.20e-28

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 106.79  E-value: 7.20e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  36 TRIVYDGSKRDASITVSNTTGQ-PYAVQAWVntETDDNSTPTP-FMATPPLFRLDPRKEQIVRIRKVPGA--LPEDRESV 111
Cdd:PRK15274   33 TRVIFNGNENSITVTLKNGNATlPYLAQAWL--EDDKFAKDTRyFTALPPLQRIEPKSDGQVKVQPLPAAasLPQDRESL 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 112 FYFNAQEIPvAGTEHGNTLKVALRTRIKLFYRPPKLQGSSMDALP-ELRWSLVYkQGKTFLqVNNPSPFHVsfigVQVVA 190
Cdd:PRK15274  111 FYFNVREIP-PKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPwQTKLTLTY-QGDGVI-FDNPTPFYL----VISNA 183

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1198982792 191 GQQKIEV---LEPKMVAPMKSQSYPLPGFKNNKGEVIfSAINDYGGY 234
Cdd:PRK15274  184 GSKENETasgFKNLLIAPREKVTSPIKGASLGSSPVV-GYVDDYGGH 229
PRK11385 PRK11385
fimbrial chaperone;
28-235 9.21e-28

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 105.99  E-value: 9.21e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  28 QAGVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWVNTET-----DDNSTPTPFMATPPLFRLDPRKEQIVRI-RKVP 101
Cdd:PRK11385   25 QAGVVVGGTRFIFPADRESISILLTNTSQESWLINSKINRPTrwaggEASTVPAPLLAAPPLILLKPGTTGTLRLlRTES 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 102 GALPEDRESVFYFNAQEIPvAGTEHGNTLKVALRTRIKLFYRPPKLQGSSMDALPELRWSLvYKQGktfLQVNNPSPFHV 181
Cdd:PRK11385  105 DILPVDRETLFELSIASVP-SGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQQLRWTR-NSQG---VQLTNPTPYYI 179

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1198982792 182 SFIGVQVVAgqqkiEVLEPKMVAPMKSQSYPLPGFKNNKGEVIFSAINDYGGYS 235
Cdd:PRK11385  180 NLIQVSVNG-----KALSNAGVVPPKSQRQTSWCQAIAPCHVAWRAINDYGGLS 228
PRK15218 PRK15218
fimbrial assembly chaperone;
29-210 1.99e-26

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 102.37  E-value: 1.99e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  29 AGVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWVntETDDNSTP-----TPFMATPPLFRLDPRKEQIVRIRKVPGA 103
Cdd:PRK15218   18 SGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWI--DNGDTSLPpeklqVPFIMTPPVIRVAANSGQQLKIKKLANN 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 104 LPEDRESVFYFNAQEIP--VAGTEHGNTLKVALRTRIKLFYRPPKLQgsSMDALPELRWSLVYKQGKtfLQVNNPSpfhV 181
Cdd:PRK15218   96 LPGDRESLFYLNVLDIPpnSDENKDKNIIKFALQNRIKLIYRPPGVQ--KVDKATFSRLQLLRAPGS--ISVKNNS---A 168

                         170       180
                  ....*....|....*....|....*....
gi 1198982792 182 SFIGVQVVAGQQKIEVlEPKMVAPMKSQS 210
Cdd:PRK15218  169 NWITIPEIKAKSKVNK-ETLLLAPWSSQS 196
PRK15285 PRK15285
fimbrial chaperone StfD;
28-233 6.08e-26

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 101.78  E-value: 6.08e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  28 QAGVMLGGTRIVYDGSKRDASITVSNTTGQ-PYAVQAWVNTETDDNSTpTPFMATPPLFRLDPRKEQIVRIRKVPG--AL 104
Cdd:PRK15285   24 QAAIAPDRTRLVFRGEDKSISVDLKNANSKlPYLAQSWVEDEKGVKIT-SPLIVVPPVQRIEPSAIGQVKIQGMPAlaSL 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 105 PEDRESVFYFNAQEIPvAGTEHGNTLKVALRTRIKLFYRPPKLqgSSMDALPELRWSLVYKQGKTFLQVNNPSPFHVSFI 184
Cdd:PRK15285  103 PQDRETLFYYNVREIP-PQSDKPNTLQIALQTRIKVFYRPQAL--SKIDMQHPWQYKITLQRQGNGYQVSNPTGYYVVLS 179

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1198982792 185 GVQVVAGQQKIEVLEPKMVAPMKSQSypLPGFKNNKGEV-IFSAINDYGG 233
Cdd:PRK15285  180 NASNRMDGTPARGFSPLVIAPKSNVT--LGGDASELGHSpVLTYVNDYGA 227
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
28-183 4.18e-25

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 99.01  E-value: 4.18e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  28 QAGVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQA-------WVNTETDDNSTPtpFMATPPLFRLDPRKEQIVRIRKV 100
Cdd:PRK15192   21 QAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDThilpggrWPGTKNEGNITP--FVVTPPLFMLSARQENSMRVVYT 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 101 PGALPEDRESVFYFNAQEIPvAGTEHGNTLKVALRTRIKLFYRPPKLQGSSMDALPELRWSLVyKQGKTflqVNNPSPFH 180
Cdd:PRK15192   99 GAPLPADRESLFTLSIAAIP-SGKPEANRVQMAFRSALKLLYRPEGLAGNPQQAYRHLIWSLT-PDGAT---VRNPTPYY 173


                  ...
gi 1198982792 181 VSF 183
Cdd:PRK15192  174 VTL 176
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 29-233 3.58e-24

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 96.77  E-value: 3.58e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  29 AGVMLGGTRIVYDGSKRDASITVSNT-TGQPYAVQAWVnTETDDNSTPTpFMATPPLFRLDPRKEQIVRIRKVPG---AL 104
Cdd:PRK15254   16 AAVNVDRTRIIMDAPQKTVAITLNNDdKTTPFLAQSWV-TDADGVRTDA-LMALPPLQRIDAGQKSQVRITQVRGltdKL 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 105 PEDRESVFYFNAQEIPvAGTEHGNTLKVALRTRIKLFYRPPKLQGSSMDAlPELRwsLVYKQGKTFLQVNNPSPFHVSFI 184
Cdd:PRK15254   94 PQDRETLFWFNVRGVP-PKPEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQ-PERK--LTAERNAGHLTLRNPTPYYITVA 169

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 1198982792 185 GVQVVAGQQKIEVLEPKMVAPMKsqSYPLPGFKNNKGEVIFSA-INDYGG 233
Cdd:PRK15254  170 WLGADRSHRLSGFREGVMVPPLG--SLPLKAVLPAETRTLWVGyIDDYGG 217
PRK15246 PRK15246
fimbrial assembly chaperone;
28-236 3.82e-20

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 85.78  E-value: 3.82e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  28 QAGVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWV---NTETDDNSTPTPFMATPPLFRLDPRKEQIVRIR-KVPGA 103
Cdd:PRK15246    9 QAAVNIDRTRIIFASDDVAQSLTLSNDNTTPMLLQVWTdagNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLlSSRQQ 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 104 LPEDRESVFYFNAQEIPVAGTEHGNT---LKVALRTRIKLFYRPPKLQGSSMDALPELRWSlvykQGKTFLQVNNPSPFH 180
Cdd:PRK15246   89 LATDRESLFWLNIYQIPPVTQDIKNHprkLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFI----AKENTIRIVNPTSWY 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1198982792 181 VSfIGVQVVAGQqkieVLEPKMVAPMKSQSYPLPGFKNNKGEVIFSAINDYGGYSK 236
Cdd:PRK15246  165 MS-LTLTMDNKK----SIGDIMVAPKTALDVPLTRSPTPGASINYAVINDSGNWRQ 215
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 173-236 5.44e-15

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 67.29  E-value: 5.44e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1198982792 173 VNNPSPFHVSFIGVQVvAGQQKIEVLEPKMVAPMKSQSYPLPGFKNNKGEVIFSAINDYGGYSK 236
Cdd:pfam02753   1 VKNPTPYYVTFSSLSL-GGGGKELALDPGMVAPFSSQTFAGLPAPAAGGTVSYTYINDYGGIVP 63
PRK15233 PRK15233
fimbrial chaperone SefB;
30-187 7.60e-10

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 57.43  E-value: 7.60e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792  30 GVMLGGTRIVYDGSKRDASITVSNTTGQPYAVQAWVntETDDNSTPTPFMATPPLFRLDPRKEQIVRIRKVPGALPEDRE 109
Cdd:PRK15233   41 GLRLGTTRVIYKEDAPSTSFWIMNEKEYPILVQTQV--YNDDKSSKAPFIVTPPILKVESNARTRLKVIPTSNLFNKNEE 118

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198982792 110 SVFYFNAQEIPVAGTEHGN---------TLKVALRTRIKLFYRPPKLQGSSMDALPELRwslVYKQGKTFLqVNNPSPFH 180
Cdd:PRK15233  119 SLYWLCVKGVPPLNDNESNnknnittnlNVNVVTNSCIKLIYRPKTIDLTTMEIADKLK---LERKGNSIV-IKNPTSSY 194


                  ....*..
gi 1198982792 181 VSFIGVQ 187
Cdd:PRK15233  195 VNIANIK 201
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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