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Conserved domains on  [gi|1160892325|ref|WP_079735401|]
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uracil phosphoribosyltransferase [Salegentibacter salegens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF6341 pfam19868
Family of unknown function (DUF6341); This family of uncharacterized proteins is found in ...
 25-74 1.48e-26

Family of unknown function (DUF6341); This family of uncharacterized proteins is found in bacteria. Proteins in this family are approximately 70 amino acids in length. There are two conserved sequence motifs, WIF and YW. Probably, they are Uracil phosphoribosyltransferases.


:

Pssm-ID: 466215  Cd Length: 50  Bit Score: 91.47  E-value: 1.48e-26
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 1160892325 25 RSLELDSWWAANALNFIFILVGLAAFAYWMKQLKHYNEVNDEDRDPTAHS 74
Cdd:pfam19868  1 RALELENWWLANIINWIFIIIGFVAFVYWMKQLKKFNDNNEEDKDTTAHS 50
 
Name Accession Description Interval E-value
DUF6341 pfam19868
Family of unknown function (DUF6341); This family of uncharacterized proteins is found in ...
 25-74 1.48e-26

Family of unknown function (DUF6341); This family of uncharacterized proteins is found in bacteria. Proteins in this family are approximately 70 amino acids in length. There are two conserved sequence motifs, WIF and YW. Probably, they are Uracil phosphoribosyltransferases.


Pssm-ID: 466215  Cd Length: 50  Bit Score: 91.47  E-value: 1.48e-26
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 1160892325 25 RSLELDSWWAANALNFIFILVGLAAFAYWMKQLKHYNEVNDEDRDPTAHS 74
Cdd:pfam19868  1 RALELENWWLANIINWIFIIIGFVAFVYWMKQLKKFNDNNEEDKDTTAHS 50
PRK15136 PRK15136
multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;
38-65 1.06e-04

multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;


Pssm-ID: 185090 [Multi-domain]  Cd Length: 390  Bit Score: 38.52  E-value: 1.06e-04
                          10        20
                  ....*....|....*....|....*...
gi 1160892325  38 LNFIFILVGLAAFAYWMKQLKHYNEVND 65
Cdd:PRK15136   27 LTLLFIIIGVAYGIYWFLVLRHHQETDD 54
 
Name Accession Description Interval E-value
DUF6341 pfam19868
Family of unknown function (DUF6341); This family of uncharacterized proteins is found in ...
 25-74 1.48e-26

Family of unknown function (DUF6341); This family of uncharacterized proteins is found in bacteria. Proteins in this family are approximately 70 amino acids in length. There are two conserved sequence motifs, WIF and YW. Probably, they are Uracil phosphoribosyltransferases.


Pssm-ID: 466215  Cd Length: 50  Bit Score: 91.47  E-value: 1.48e-26
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 1160892325 25 RSLELDSWWAANALNFIFILVGLAAFAYWMKQLKHYNEVNDEDRDPTAHS 74
Cdd:pfam19868  1 RALELENWWLANIINWIFIIIGFVAFVYWMKQLKKFNDNNEEDKDTTAHS 50
PRK15136 PRK15136
multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;
38-65 1.06e-04

multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;


Pssm-ID: 185090 [Multi-domain]  Cd Length: 390  Bit Score: 38.52  E-value: 1.06e-04
                          10        20
                  ....*....|....*....|....*...
gi 1160892325  38 LNFIFILVGLAAFAYWMKQLKHYNEVND 65
Cdd:PRK15136   27 LTLLFIIIGVAYGIYWFLVLRHHQETDD 54
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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